Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416730 | sp|E7BQV0|NPR1_MALHU | 57.246 | 552 | 217 | 6 | 18 | 558 | 18 | 561 | 0.0 | 590 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416730 | G7K396 | 93.960 | 596 | 23 | 2 | 1 | 585 | 1 | 594 | 0.0 | 1092 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1416730 | TR | TRAF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0023060 | Msa1416730 | 0.805831 | 1.103860e-49 | -8.615850e-47 |
| Msa0030160 | Msa1416730 | 0.801062 | 1.075004e-48 | -8.615850e-47 |
| Msa0051050 | Msa1416730 | 0.805644 | 1.208225e-49 | -8.615850e-47 |
| Msa0090090 | Msa1416730 | 0.806090 | 9.738185e-50 | -8.615850e-47 |
| Msa0092410 | Msa1416730 | 0.839480 | 1.545510e-57 | -8.615850e-47 |
| Msa0101240 | Msa1416730 | 0.810456 | 1.142160e-50 | -8.615850e-47 |
| Msa1353890 | Msa1416730 | 0.835976 | 1.225997e-56 | -8.615850e-47 |
| Msa1360420 | Msa1416730 | 0.813205 | 2.879838e-51 | -8.615850e-47 |
| Msa1383680 | Msa1416730 | 0.811210 | 7.845676e-51 | -8.615850e-47 |
| Msa1390290 | Msa1416730 | 0.808824 | 2.561614e-50 | -8.615850e-47 |
| Msa1398900 | Msa1416730 | 0.803973 | 2.699343e-49 | -8.615850e-47 |
| Msa1400340 | Msa1416730 | 0.988808 | 1.701481e-175 | -8.615850e-47 |
| Msa1408180 | Msa1416730 | 0.809919 | 1.491360e-50 | -8.615850e-47 |
| Msa1416730 | Msa1418280 | 0.809071 | 2.267581e-50 | -8.615850e-47 |
| Msa1416730 | Msa1424630 | 0.809592 | 1.753860e-50 | -8.615850e-47 |
| Msa1416730 | Msa1428070 | 0.807096 | 5.973862e-50 | -8.615850e-47 |
| Msa1416730 | Msa1430550 | 0.856880 | 2.384456e-62 | -8.615850e-47 |
| Msa1416730 | Msa1439650 | 0.807077 | 6.027421e-50 | -8.615850e-47 |
| Msa1416730 | Msa1448980 | 0.809045 | 2.297059e-50 | -8.615850e-47 |
| Msa1416730 | Msa1450440 | 0.800175 | 1.630177e-48 | -8.615850e-47 |
| Msa0614350 | Msa1416730 | 0.806530 | 7.867202e-50 | -8.615850e-47 |
| Msa0614380 | Msa1416730 | 0.848568 | 5.641914e-60 | -8.615850e-47 |
| Msa0614920 | Msa1416730 | 0.813412 | 2.593029e-51 | -8.615850e-47 |
| Msa0631330 | Msa1416730 | 0.809381 | 1.946547e-50 | -8.615850e-47 |
| Msa0662580 | Msa1416730 | 0.807920 | 3.993086e-50 | -8.615850e-47 |
| Msa0697590 | Msa1416730 | 0.821718 | 3.479507e-53 | -8.615850e-47 |
| Msa0708310 | Msa1416730 | 0.838197 | 3.318553e-57 | -8.615850e-47 |
| Msa0733010 | Msa1416730 | 0.837996 | 3.737446e-57 | -8.615850e-47 |
| Msa0742210 | Msa1416730 | 0.806952 | 6.407531e-50 | -8.615850e-47 |
| Msa0742430 | Msa1416730 | 0.823704 | 1.200242e-53 | -8.615850e-47 |
| Msa0773990 | Msa1416730 | 0.820176 | 7.876348e-53 | -8.615850e-47 |
| Msa0782960 | Msa1416730 | 0.802297 | 5.998792e-49 | -8.615850e-47 |
| Msa0785120 | Msa1416730 | 0.814502 | 1.491104e-51 | -8.615850e-47 |
| Msa0786980 | Msa1416730 | 0.943877 | 5.431178e-103 | -8.615850e-47 |
| Msa0794210 | Msa1416730 | 0.802280 | 6.046614e-49 | -8.615850e-47 |
| Msa0822350 | Msa1416730 | 0.930384 | 1.772883e-93 | -8.615850e-47 |
| Msa0823540 | Msa1416730 | 0.824564 | 7.540027e-54 | -8.615850e-47 |
| Msa0828240 | Msa1416730 | 0.813758 | 2.176728e-51 | -8.615850e-47 |
| Msa0204840 | Msa1416730 | 0.801557 | 8.510467e-49 | -8.615850e-47 |
| Msa0215590 | Msa1416730 | 0.804848 | 1.773536e-49 | -8.615850e-47 |
| Msa0217700 | Msa1416730 | 0.801776 | 7.674928e-49 | -8.615850e-47 |
| Msa0227340 | Msa1416730 | 0.802434 | 5.620677e-49 | -8.615850e-47 |
| Msa1281690 | Msa1416730 | 0.811518 | 6.725665e-51 | -8.615850e-47 |
| Msa1325060 | Msa1416730 | 0.808889 | 2.481144e-50 | -8.615850e-47 |
| Msa0371460 | Msa1416730 | 0.830073 | 3.606270e-55 | -8.615850e-47 |
| Msa0408340 | Msa1416730 | 0.876796 | 1.049792e-68 | -8.615850e-47 |
| Msa0419670 | Msa1416730 | 0.854165 | 1.476019e-61 | -8.615850e-47 |
| Msa0443020 | Msa1416730 | 0.856522 | 3.038571e-62 | -8.615850e-47 |
| Msa0450180 | Msa1416730 | 0.812928 | 3.312353e-51 | -8.615850e-47 |
| Msa0463270 | Msa1416730 | 0.818853 | 1.578333e-52 | -8.615850e-47 |
| Msa0992640 | Msa1416730 | 0.844443 | 7.534508e-59 | -8.615850e-47 |
| Msa0992680 | Msa1416730 | 0.847784 | 9.287672e-60 | -8.615850e-47 |
| Msa0999680 | Msa1416730 | 0.816501 | 5.352836e-52 | -8.615850e-47 |
| Msa1017160 | Msa1416730 | 0.801808 | 7.559948e-49 | -8.615850e-47 |
| Msa1043120 | Msa1416730 | 0.882945 | 6.801092e-71 | -8.615850e-47 |
| Msa1084640 | Msa1416730 | 0.988408 | 6.686501e-174 | -8.615850e-47 |
| Msa0244880 | Msa1416730 | 0.825946 | 3.551052e-54 | -8.615850e-47 |
| Msa0244890 | Msa1416730 | 0.825490 | 4.556933e-54 | -8.615850e-47 |
| Msa0244900 | Msa1416730 | 0.808065 | 3.719041e-50 | -8.615850e-47 |
| Msa0264830 | Msa1416730 | 0.805545 | 1.267729e-49 | -8.615850e-47 |
| Msa0267790 | Msa1416730 | 0.812454 | 4.204701e-51 | -8.615850e-47 |
| Msa0269560 | Msa1416730 | 0.847652 | 1.009694e-59 | -8.615850e-47 |
| Msa0271540 | Msa1416730 | 0.803348 | 3.638662e-49 | -8.615850e-47 |
| Msa0271550 | Msa1416730 | 0.813283 | 2.768370e-51 | -8.615850e-47 |
| Msa0283470 | Msa1416730 | 0.835429 | 1.686535e-56 | -8.615850e-47 |
| Msa0283490 | Msa1416730 | 0.808885 | 2.485749e-50 | -8.615850e-47 |
| Msa0283500 | Msa1416730 | 0.830229 | 3.303238e-55 | -8.615850e-47 |
| Msa0302870 | Msa1416730 | 0.814844 | 1.252353e-51 | -8.615850e-47 |
| Msa0305840 | Msa1416730 | 0.811648 | 6.301882e-51 | -8.615850e-47 |
| Msa0331980 | Msa1416730 | 0.829314 | 5.516401e-55 | -8.615850e-47 |
| Msa0333650 | Msa1416730 | 0.808933 | 2.427842e-50 | -8.615850e-47 |
| Msa0340340 | Msa1416730 | 0.807913 | 4.007418e-50 | -8.615850e-47 |
| Msa0348550 | Msa1416730 | 0.829220 | 5.814697e-55 | -8.615850e-47 |
| Msa1120930 | Msa1416730 | 0.805230 | 1.475619e-49 | -8.615850e-47 |
| Msa1207890 | Msa1416730 | 0.816404 | 5.627963e-52 | -8.615850e-47 |
| Msa0490380 | Msa1416730 | 0.841485 | 4.618922e-58 | -8.615850e-47 |
| Msa0501410 | Msa1416730 | 0.847833 | 9.003020e-60 | -8.615850e-47 |
| Msa0506860 | Msa1416730 | 0.844683 | 6.494853e-59 | -8.615850e-47 |
| Msa0508880 | Msa1416730 | 0.802929 | 4.442631e-49 | -8.615850e-47 |
| Msa0511620 | Msa1416730 | 0.858461 | 8.109224e-63 | -8.615850e-47 |
| Msa0546520 | Msa1416730 | 0.803370 | 3.601267e-49 | -8.615850e-47 |
| Msa0562570 | Msa1416730 | 0.818928 | 1.517732e-52 | -8.615850e-47 |
| Msa0574600 | Msa1416730 | 0.828002 | 1.145244e-54 | -8.615850e-47 |
| Msa0580920 | Msa1416730 | 0.810927 | 9.037914e-51 | -8.615850e-47 |
| Msa0862620 | Msa1416730 | 0.829783 | 4.242417e-55 | -8.615850e-47 |
| Msa0865970 | Msa1416730 | 0.803100 | 4.094927e-49 | -8.615850e-47 |
| Msa0866070 | Msa1416730 | 0.801496 | 8.762003e-49 | -8.615850e-47 |
| Msa0958080 | Msa1416730 | 0.829378 | 5.323016e-55 | -8.615850e-47 |
| Msa0965290 | Msa1416730 | 0.812745 | 3.631895e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416730 | MtrunA17_Chr5g0442661 | 93.960 | 596 | 23 | 2 | 1 | 585 | 1 | 594 | 0.0 | 1092 |
| Msa1416730 | MtrunA17_Chr2g0291741 | 58.951 | 553 | 205 | 6 | 18 | 556 | 19 | 563 | 0.0 | 645 |
| Msa1416730 | MtrunA17_Chr2g0299621 | 39.964 | 563 | 309 | 13 | 10 | 556 | 6 | 555 | 2.30e-119 | 365 |
| Msa1416730 | MtrunA17_Chr1g0171771 | 32.216 | 388 | 217 | 10 | 54 | 399 | 2 | 385 | 7.19e-45 | 166 |
| Msa1416730 | MtrunA17_Chr7g0256321 | 32.425 | 367 | 211 | 9 | 66 | 399 | 24 | 386 | 8.89e-45 | 165 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416730 | AT5G45110.1 | 51.977 | 531 | 228 | 7 | 42 | 553 | 35 | 557 | 0.0 | 527 |
| Msa1416730 | AT4G19660.1 | 50.733 | 546 | 229 | 10 | 33 | 553 | 20 | 550 | 6.98e-173 | 503 |
| Msa1416730 | AT4G19660.2 | 48.342 | 573 | 229 | 11 | 33 | 553 | 20 | 577 | 9.40e-167 | 488 |
| Msa1416730 | AT5G45110.2 | 50.959 | 469 | 207 | 6 | 42 | 495 | 35 | 495 | 7.02e-156 | 457 |
| Msa1416730 | AT1G64280.1 | 37.968 | 561 | 308 | 10 | 23 | 556 | 15 | 562 | 7.28e-111 | 344 |
| Msa1416730 | AT4G26120.2 | 37.436 | 585 | 330 | 13 | 16 | 581 | 16 | 583 | 6.73e-110 | 342 |
| Msa1416730 | AT4G26120.1 | 37.607 | 585 | 329 | 13 | 16 | 581 | 15 | 582 | 6.83e-110 | 342 |
| Msa1416730 | AT3G57130.1 | 32.134 | 389 | 230 | 11 | 40 | 399 | 1 | 384 | 1.38e-46 | 170 |
| Msa1416730 | AT2G41370.1 | 32.796 | 372 | 207 | 11 | 66 | 399 | 25 | 391 | 1.48e-44 | 165 |
| Msa1416730 | AT3G57130.2 | 31.548 | 168 | 89 | 6 | 40 | 186 | 1 | 163 | 9.47e-15 | 73.2 |
Find 104 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGGATTGTAATCTTAAT+TGG | 0.155412 | tig0024373:-76548 | None:intergenic |
| AATTGTTTGACATGGTTTCT+AGG | 0.213691 | tig0024373:-77165 | None:intergenic |
| GAGCCTTGTCAACAAAATTT+AGG | 0.226635 | tig0024373:-75304 | None:intergenic |
| TGACATGGACATCATATATT+TGG | 0.235777 | tig0024373:+75418 | Msa1416730:CDS |
| TTTGTATACTGGAAAGTTAA+AGG | 0.276961 | tig0024373:+74439 | Msa1416730:CDS |
| AAAGCAACATAGCATCTTAT+TGG | 0.277580 | tig0024373:-77055 | None:intergenic |
| TTCTTGCATTATTTGTATAC+TGG | 0.287135 | tig0024373:+74428 | Msa1416730:CDS |
| AGTAGTTGCTATATAAGTTT+TGG | 0.295240 | tig0024373:+76982 | Msa1416730:three_prime_UTR |
| GCAACTACTCTTGAACAAAA+TGG | 0.299646 | tig0024373:-76968 | None:intergenic |
| TCAACACATGTTGTCACTTC+TGG | 0.315551 | tig0024373:-74470 | None:intergenic |
| ATAACCATGTAATATAATTA+AGG | 0.321063 | tig0024373:+77132 | Msa1416730:three_prime_UTR |
| TGATGTGCAGCCATTAAAAT+TGG | 0.325931 | tig0024373:-75344 | None:intergenic |
| AGGAAAAGATGAAGAAGTTA+AGG | 0.328401 | tig0024373:+74326 | Msa1416730:CDS |
| TTGTGCATATTGTGATTCTA+AGG | 0.357367 | tig0024373:+75670 | Msa1416730:CDS |
| CATTGCCACATGTTCATTGT+TGG | 0.365929 | tig0024373:-74130 | None:intergenic |
| GCATCAGAAACCACTCTTGA+TGG | 0.370481 | tig0024373:+75827 | Msa1416730:CDS |
| GTTCAAGAAGTTCTTACTCT+TGG | 0.391310 | tig0024373:+75695 | Msa1416730:CDS |
| AACGAAGAAAGCACGGTTCA+TGG | 0.394343 | tig0024373:+76805 | Msa1416730:CDS |
| AGTCCATTGGGAGAAATTAC+AGG | 0.395594 | tig0024373:-77219 | None:intergenic |
| TGGTATTCATCGATGTATAT+TGG | 0.399098 | tig0024373:+74266 | Msa1416730:CDS |
| ATCTGCCCCAGCATTCTCTA+TGG | 0.400544 | tig0024373:-76433 | None:intergenic |
| CGTCAGAGTCCAATGCCTTA+AGG | 0.406730 | tig0024373:-75568 | None:intergenic |
| TGCAAGTTCAACAGCTTTGA+AGG | 0.409850 | tig0024373:+76470 | Msa1416730:CDS |
| GGTTCCACTTCCATTGCATC+TGG | 0.423349 | tig0024373:-75512 | None:intergenic |
| ATTGCATCTGGTGTTGATTC+CGG | 0.423636 | tig0024373:-75500 | None:intergenic |
| GAAGGCATTTCACAAGGATA+TGG | 0.425039 | tig0024373:+76847 | Msa1416730:CDS |
| CTTCTTCCGTTCCCTTCTCT+AGG | 0.435165 | tig0024373:-76775 | None:intergenic |
| GTGTTGATTCCGGCAGAGAT+TGG | 0.467675 | tig0024373:-75490 | None:intergenic |
| TCCAAAGCAAAATTGATAGC+AGG | 0.467829 | tig0024373:-74521 | None:intergenic |
| TGTTCTTTCCTGCTGAGGCA+AGG | 0.476184 | tig0024373:+76406 | Msa1416730:CDS |
| TGTATCCACGAGGATTCTTA+AGG | 0.478040 | tig0024373:-75733 | None:intergenic |
| ATGGCTACCCTTGCCTCAGC+AGG | 0.479921 | tig0024373:-76414 | None:intergenic |
| AGTTCCTTAATTATATTACA+TGG | 0.483900 | tig0024373:-77136 | None:intergenic |
| AGAAGTTCTTACTCTTGGAT+TGG | 0.484032 | tig0024373:+75700 | Msa1416730:CDS |
| CTCTTATCATTCACAGTCAC+AGG | 0.484685 | tig0024373:-75533 | None:intergenic |
| GTTCTTTCCTGCTGAGGCAA+GGG | 0.487551 | tig0024373:+76407 | Msa1416730:CDS |
| AAAGATGAAGAAGTTAAGGA+TGG | 0.488807 | tig0024373:+74330 | Msa1416730:CDS |
| CTGTGAATGATAAGAGTGTC+AGG | 0.490919 | tig0024373:+75540 | Msa1416730:CDS |
| GAGTGTCAGGAAAATCCTTA+AGG | 0.494210 | tig0024373:+75553 | Msa1416730:CDS |
| CACATGTTCATTGTTGGTTG+AGG | 0.498708 | tig0024373:-74124 | None:intergenic |
| AGTTACAACACTACATCAAA+AGG | 0.500386 | tig0024373:-77005 | None:intergenic |
| CAGGAAAATCCTTAAGGCAT+TGG | 0.500644 | tig0024373:+75559 | Msa1416730:CDS |
| GGGTAGCCATAGAGAATGCT+GGG | 0.504854 | tig0024373:+76427 | Msa1416730:CDS |
| CCTCCGAGTCCAATCTCTGC+CGG | 0.505391 | tig0024373:+75481 | Msa1416730:CDS |
| TGAAGAAGTTAAGGATGGAA+AGG | 0.507059 | tig0024373:+74335 | Msa1416730:CDS |
| ATACATCGATGAATACCAAC+AGG | 0.509934 | tig0024373:-74261 | None:intergenic |
| GAAGAAGTTAAGGATGGAAA+GGG | 0.513248 | tig0024373:+74336 | Msa1416730:CDS |
| AGGGTAGCCATAGAGAATGC+TGG | 0.515215 | tig0024373:+76426 | Msa1416730:CDS |
| TTTCAATAGTGCAACCAAGA+TGG | 0.516370 | tig0024373:-75792 | None:intergenic |
| TGCATTGTCTTCTACATCAT+CGG | 0.516416 | tig0024373:+76898 | Msa1416730:CDS |
| TACATCATCGGCAAGTCGTA+GGG | 0.521228 | tig0024373:+76910 | Msa1416730:CDS |
| ACGAAAGGATCCATCCATCT+TGG | 0.521666 | tig0024373:+75778 | Msa1416730:CDS |
| TCACGTTGCCGCAAGACGAA+AGG | 0.524031 | tig0024373:+75763 | Msa1416730:CDS |
| GAATGCAATGAGAGAGAAGC+TGG | 0.524808 | tig0024373:-75379 | None:intergenic |
| AAGTTCTATGTCAGTGAACA+TGG | 0.525587 | tig0024373:+75976 | Msa1416730:CDS |
| CTACATCATCGGCAAGTCGT+AGG | 0.526560 | tig0024373:+76909 | Msa1416730:CDS |
| TAATTGTGTACAGTTGAGAA+TGG | 0.528763 | tig0024373:+76680 | Msa1416730:intron |
| TGTGTACAGTTGAGAATGGT+AGG | 0.529889 | tig0024373:+76684 | Msa1416730:intron |
| GGATGGATCCTTTCGTCTTG+CGG | 0.530660 | tig0024373:-75771 | None:intergenic |
| CTGGATTACCTTGAAAATAG+AGG | 0.531111 | tig0024373:+76040 | Msa1416730:CDS |
| TAGGCTGTTCTTTCCTGCTG+AGG | 0.533770 | tig0024373:+76401 | Msa1416730:CDS |
| AACACCAGATGCAATGGAAG+TGG | 0.536591 | tig0024373:+75508 | Msa1416730:CDS |
| GGAAGGAGTCTCACAAGGAT+AGG | 0.544010 | tig0024373:+75918 | Msa1416730:CDS |
| CTTGTTGAAGAAATTCCTGT+TGG | 0.546823 | tig0024373:+74246 | Msa1416730:CDS |
| ATGTTGCAGTTGCATTTGCT+AGG | 0.553352 | tig0024373:+76382 | Msa1416730:intron |
| CATCACTCAATAACTTCTCA+AGG | 0.556447 | tig0024373:-74194 | None:intergenic |
| GTATCTAGACGATGATATGC+CGG | 0.557917 | tig0024373:+76742 | Msa1416730:CDS |
| CGGCAGAGATTGGACTCGGA+GGG | 0.559848 | tig0024373:-75480 | None:intergenic |
| TCAGAGATTGACGAGGCGAA+AGG | 0.561716 | tig0024373:+75871 | Msa1416730:CDS |
| ATTCCGGCAGAGATTGGACT+CGG | 0.564498 | tig0024373:-75484 | None:intergenic |
| AGCAGAGAACGAAGAAAGCA+CGG | 0.564815 | tig0024373:+76798 | Msa1416730:CDS |
| CAAGCACCTCAGAACAATGC+GGG | 0.572417 | tig0024373:-76715 | None:intergenic |
| AATAGTGCAACCAAGATGGA+TGG | 0.572602 | tig0024373:-75788 | None:intergenic |
| ATGGCTGAAAATAACCAAGC+AGG | 0.574550 | tig0024373:+76866 | Msa1416730:CDS |
| TTGAGATGATACAAAACTCA+AGG | 0.576016 | tig0024373:-74064 | None:intergenic |
| GGAATCAACACCAGATGCAA+TGG | 0.582737 | tig0024373:+75502 | Msa1416730:CDS |
| CCAAAGCAAAATTGATAGCA+GGG | 0.584439 | tig0024373:-74520 | None:intergenic |
| TGATGATTTACACATGAGAC+TGG | 0.587404 | tig0024373:+76021 | Msa1416730:CDS |
| AGCAGTTTGTCCATCAAGAG+TGG | 0.589661 | tig0024373:-75837 | None:intergenic |
| ACTTAAAGATGAGGTGCAGA+AGG | 0.589892 | tig0024373:+76829 | Msa1416730:CDS |
| CAACAATGAACATGTGGCAA+TGG | 0.591956 | tig0024373:+74131 | Msa1416730:CDS |
| CATGTTGTCACTTCTGGTGG+TGG | 0.593704 | tig0024373:-74464 | None:intergenic |
| GCAACTAAAATTGTTTGACA+TGG | 0.594533 | tig0024373:-77173 | None:intergenic |
| CAATTTGTCAGAGATTGACG+AGG | 0.597048 | tig0024373:+75864 | Msa1416730:CDS |
| GCAAGTTCAACAGCTTTGAA+GGG | 0.599785 | tig0024373:+76471 | Msa1416730:CDS |
| ATTTCAGTCATAACTTCATG+AGG | 0.607057 | tig0024373:-75452 | None:intergenic |
| GAGAGTCGTAAGGTCTGACA+TGG | 0.616876 | tig0024373:+75403 | Msa1416730:CDS |
| CTCAACCAACAATGAACATG+TGG | 0.620410 | tig0024373:+74125 | Msa1416730:CDS |
| TAAGAATCCTCGTGGATACA+CGG | 0.628927 | tig0024373:+75736 | Msa1416730:CDS |
| ACAAGCATAGTGTAGTGCAT+AGG | 0.635531 | tig0024373:-75651 | None:intergenic |
| GTTCATGGAACTTAAAGATG+AGG | 0.636671 | tig0024373:+76820 | Msa1416730:CDS |
| AAAGTCTTAACCACAAAGTG+AGG | 0.653570 | tig0024373:+76933 | Msa1416730:CDS |
| CCGGCAGAGATTGGACTCGG+AGG | 0.654889 | tig0024373:-75481 | None:intergenic |
| GCAGGGGAAGGAGTCTCACA+AGG | 0.661433 | tig0024373:+75913 | Msa1416730:CDS |
| ATTGCATTCAGAGAGTCGTA+AGG | 0.666386 | tig0024373:+75393 | Msa1416730:CDS |
| GGTGCAGAAGGCATTTCACA+AGG | 0.668394 | tig0024373:+76841 | Msa1416730:CDS |
| ATTCTCCTTAAGAATCCTCG+TGG | 0.687759 | tig0024373:+75728 | Msa1416730:CDS |
| GTGAGTTTGAATAAGCTCAG+TGG | 0.700757 | tig0024373:+74168 | Msa1416730:CDS |
| ACACATGTTGTCACTTCTGG+TGG | 0.703043 | tig0024373:-74467 | None:intergenic |
| TCAAGCACCTCAGAACAATG+CGG | 0.711186 | tig0024373:-76716 | None:intergenic |
| GCTGTTGAACTTGCATAGCG+TGG | 0.711386 | tig0024373:-76462 | None:intergenic |
| GGTAGCCATAGAGAATGCTG+GGG | 0.739957 | tig0024373:+76428 | Msa1416730:CDS |
| TGAAGAACCGTGTATCCACG+AGG | 0.741022 | tig0024373:-75743 | None:intergenic |
| AGGATGGAAAGGGAAAGCCA+AGG | 0.758248 | tig0024373:+74346 | Msa1416730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATGAGCAATAAAAATAA+AGG | - | tig0024373:74647-74666 | None:intergenic | 15.0% |
| !!! | ATTTTATTTATACATTTTGC+AGG | + | tig0024373:74965-74984 | Msa1416730:intron | 15.0% |
| !!! | TATTTCAAATTTTATTCACT+TGG | - | tig0024373:75023-75042 | None:intergenic | 15.0% |
| !!! | AAAGTTTCATGAAAATATTT+TGG | - | tig0024373:76318-76337 | None:intergenic | 15.0% |
| !! | ATAACCATGTAATATAATTA+AGG | + | tig0024373:77132-77151 | Msa1416730:three_prime_UTR | 15.0% |
| !!! | TTTCATGAACTTTTTAAGAA+AGG | + | tig0024373:74306-74325 | Msa1416730:CDS | 20.0% |
| !!! | AATATTTTACGTAGTTTTGT+AGG | - | tig0024373:74889-74908 | None:intergenic | 20.0% |
| !! | AAAGGATTATCATGAAAAAA+CGG | + | tig0024373:75889-75908 | Msa1416730:CDS | 20.0% |
| !!! | AATACTTAATGAATTGATTC+TGG | - | tig0024373:76247-76266 | None:intergenic | 20.0% |
| !!! | TTTCATGAAACTTTTGAATT+TGG | + | tig0024373:76324-76343 | Msa1416730:intron | 20.0% |
| !! | AGTTCCTTAATTATATTACA+TGG | - | tig0024373:77139-77158 | None:intergenic | 20.0% |
| ! | TTCTTGCATTATTTGTATAC+TGG | + | tig0024373:74428-74447 | Msa1416730:CDS | 25.0% |
| ! | TTTGTATACTGGAAAGTTAA+AGG | + | tig0024373:74439-74458 | Msa1416730:CDS | 25.0% |
| ! | AGCAATAAAAATAAAGGAGA+AGG | - | tig0024373:74641-74660 | None:intergenic | 25.0% |
| !! | AGCTTAGGATTTACATTTTA+CGG | - | tig0024373:74723-74742 | None:intergenic | 25.0% |
| !!! | GTATGTTTACTTTTGATCTA+GGG | + | tig0024373:74844-74863 | Msa1416730:intron | 25.0% |
| !!! | TATTAGTCTAAGCTAAGTTT+TGG | - | tig0024373:74928-74947 | None:intergenic | 25.0% |
| !! | TTTATACATTTTGCAGGTTT+TGG | + | tig0024373:74971-74990 | Msa1416730:intron | 25.0% |
| ! | AGCACATCAAATTTATATGA+AGG | - | tig0024373:75075-75094 | None:intergenic | 25.0% |
| ! | ATATAAATTTGATGTGCTGA+CGG | + | tig0024373:75077-75096 | Msa1416730:intron | 25.0% |
| !!! | CTCAAGTTTTTTTTTTCTTC+CGG | - | tig0024373:75232-75251 | None:intergenic | 25.0% |
| ! | ACATTAGCTCATTTCAAAAA+AGG | - | tig0024373:75255-75274 | None:intergenic | 25.0% |
| !! | AGATGTCATTCCAATTTTAA+TGG | + | tig0024373:75334-75353 | Msa1416730:CDS | 25.0% |
| !!! | TTCATGAAAATATTTTGGTG+AGG | - | tig0024373:76313-76332 | None:intergenic | 25.0% |
| ! | TTGAATTTGGAAGCTTATTA+TGG | + | tig0024373:76337-76356 | Msa1416730:intron | 25.0% |
| ! | ATCTTTATACGAACATCAAA+TGG | + | tig0024373:76630-76649 | Msa1416730:intron | 25.0% |
| !! | AGTAGTTGCTATATAAGTTT+TGG | + | tig0024373:76982-77001 | Msa1416730:three_prime_UTR | 25.0% |
| !!! | CAAACAATTTTAGTTGCAAA+TGG | + | tig0024373:77179-77198 | Msa1416730:three_prime_UTR | 25.0% |
| TTGAGATGATACAAAACTCA+AGG | - | tig0024373:74067-74086 | None:intergenic | 30.0% | |
| TGGTATTCATCGATGTATAT+TGG | + | tig0024373:74266-74285 | Msa1416730:CDS | 30.0% | |
| AGGAAAAGATGAAGAAGTTA+AGG | + | tig0024373:74326-74345 | Msa1416730:CDS | 30.0% | |
| AAAGATGAAGAAGTTAAGGA+TGG | + | tig0024373:74330-74349 | Msa1416730:CDS | 30.0% | |
| CCTTTCTAATATTCAAGCTT+AGG | - | tig0024373:74738-74757 | None:intergenic | 30.0% | |
| CCTAAGCTTGAATATTAGAA+AGG | + | tig0024373:74735-74754 | Msa1416730:intron | 30.0% | |
| !! | CGTATGTTTACTTTTGATCT+AGG | + | tig0024373:74843-74862 | Msa1416730:intron | 30.0% |
| ACTAATAAGCAACATCAGAT+TGG | + | tig0024373:74941-74960 | Msa1416730:intron | 30.0% | |
| ! | TTCTTTTCCTTTGTGCTATA+TGG | + | tig0024373:75200-75219 | Msa1416730:intron | 30.0% |
| ! | ATATCTTTTTACTGATGCAG+AGG | + | tig0024373:75276-75295 | Msa1416730:intron | 30.0% |
| ! | TCTCCTAAATTTTGTTGACA+AGG | + | tig0024373:75301-75320 | Msa1416730:CDS | 30.0% |
| TGACATGGACATCATATATT+TGG | + | tig0024373:75418-75437 | Msa1416730:CDS | 30.0% | |
| ATTTCAGTCATAACTTCATG+AGG | - | tig0024373:75455-75474 | None:intergenic | 30.0% | |
| TTGTGCATATTGTGATTCTA+AGG | + | tig0024373:75670-75689 | Msa1416730:CDS | 30.0% | |
| TTGGTTGCACTATTGAAAAA+CGG | + | tig0024373:75797-75816 | Msa1416730:CDS | 30.0% | |
| !! | ACCTCTAGAATCAATTCTAA+AGG | - | tig0024373:76103-76122 | None:intergenic | 30.0% |
| !! | GTCACTTGCTATTATACTTT+AGG | + | tig0024373:76275-76294 | Msa1416730:intron | 30.0% |
| !!! | AAATATTTTGGTGAGGTTCT+TGG | - | tig0024373:76306-76325 | None:intergenic | 30.0% |
| ! | AGTTTTCTTGTTCTAACAGA+AGG | - | tig0024373:76528-76547 | None:intergenic | 30.0% |
| CAAGGGATTGTAATCTTAAT+TGG | - | tig0024373:76551-76570 | None:intergenic | 30.0% | |
| TTACAATCCCTTGTAAAAAC+AGG | + | tig0024373:76558-76577 | Msa1416730:CDS | 30.0% | |
| !!! | GATCATACCTGTTTTTACAA+GGG | - | tig0024373:76568-76587 | None:intergenic | 30.0% |
| !!! | TGATCATACCTGTTTTTACA+AGG | - | tig0024373:76569-76588 | None:intergenic | 30.0% |
| AACTGTACACAATTAATTGG+AGG | - | tig0024373:76675-76694 | None:intergenic | 30.0% | |
| CTCAACTGTACACAATTAAT+TGG | - | tig0024373:76678-76697 | None:intergenic | 30.0% | |
| TAATTGTGTACAGTTGAGAA+TGG | + | tig0024373:76680-76699 | Msa1416730:intron | 30.0% | |
| AGTTACAACACTACATCAAA+AGG | - | tig0024373:77008-77027 | None:intergenic | 30.0% | |
| AAAGCAACATAGCATCTTAT+TGG | - | tig0024373:77058-77077 | None:intergenic | 30.0% | |
| AATTGTTTGACATGGTTTCT+AGG | - | tig0024373:77168-77187 | None:intergenic | 30.0% | |
| GCAACTAAAATTGTTTGACA+TGG | - | tig0024373:77176-77195 | None:intergenic | 30.0% | |
| CATCACTCAATAACTTCTCA+AGG | - | tig0024373:74197-74216 | None:intergenic | 35.0% | |
| CTTGTTGAAGAAATTCCTGT+TGG | + | tig0024373:74246-74265 | Msa1416730:CDS | 35.0% | |
| ATACATCGATGAATACCAAC+AGG | - | tig0024373:74264-74283 | None:intergenic | 35.0% | |
| TGAAGAAGTTAAGGATGGAA+AGG | + | tig0024373:74335-74354 | Msa1416730:CDS | 35.0% | |
| GAAGAAGTTAAGGATGGAAA+GGG | + | tig0024373:74336-74355 | Msa1416730:CDS | 35.0% | |
| ATCTTCATCATGAGATACCT+TGG | - | tig0024373:74366-74385 | None:intergenic | 35.0% | |
| GGTATCTCATGATGAAGATT+TGG | + | tig0024373:74367-74386 | Msa1416730:intron | 35.0% | |
| ! | CCAAAGCAAAATTGATAGCA+GGG | - | tig0024373:74523-74542 | None:intergenic | 35.0% |
| ! | TCCAAAGCAAAATTGATAGC+AGG | - | tig0024373:74524-74543 | None:intergenic | 35.0% |
| !!! | AGAGCTTGCTTTAGTTTTTC+AGG | + | tig0024373:74577-74596 | Msa1416730:CDS | 35.0% |
| TTACGGTCCATTTCACAATA+TGG | - | tig0024373:74706-74725 | None:intergenic | 35.0% | |
| ATTCACTTGGAACATAGATG+AGG | - | tig0024373:75010-75029 | None:intergenic | 35.0% | |
| GGTAGACAAACATGCTTATT+AGG | - | tig0024373:75054-75073 | None:intergenic | 35.0% | |
| CTTGATAAATACACCAACAC+AGG | - | tig0024373:75148-75167 | None:intergenic | 35.0% | |
| TCCTTTGTGCTATATGGAAT+AGG | + | tig0024373:75206-75225 | Msa1416730:intron | 35.0% | |
| ! | GAGCCTTGTCAACAAAATTT+AGG | - | tig0024373:75307-75326 | None:intergenic | 35.0% |
| TGATGTGCAGCCATTAAAAT+TGG | - | tig0024373:75347-75366 | None:intergenic | 35.0% | |
| ! | GAGTCTGAATCTTCTTTTAG+AGG | + | tig0024373:75604-75623 | Msa1416730:CDS | 35.0% |
| GTTCAAGAAGTTCTTACTCT+TGG | + | tig0024373:75695-75714 | Msa1416730:CDS | 35.0% | |
| AGAAGTTCTTACTCTTGGAT+TGG | + | tig0024373:75700-75719 | Msa1416730:CDS | 35.0% | |
| TTTCAATAGTGCAACCAAGA+TGG | - | tig0024373:75795-75814 | None:intergenic | 35.0% | |
| TTATCATGAAAAAACGGTGC+AGG | + | tig0024373:75895-75914 | Msa1416730:CDS | 35.0% | |
| TATCATGAAAAAACGGTGCA+GGG | + | tig0024373:75896-75915 | Msa1416730:CDS | 35.0% | |
| AAGTTCTATGTCAGTGAACA+TGG | + | tig0024373:75976-75995 | Msa1416730:CDS | 35.0% | |
| TGATGATTTACACATGAGAC+TGG | + | tig0024373:76021-76040 | Msa1416730:CDS | 35.0% | |
| CTGGATTACCTTGAAAATAG+AGG | + | tig0024373:76040-76059 | Msa1416730:CDS | 35.0% | |
| ! | GACAAGTACCTCTATTTTCA+AGG | - | tig0024373:76051-76070 | None:intergenic | 35.0% |
| !! | GCCTTTAGAATTGATTCTAG+AGG | + | tig0024373:76099-76118 | Msa1416730:intron | 35.0% |
| !! | TTCTCTAGGACAAAAACATC+CGG | - | tig0024373:76764-76783 | None:intergenic | 35.0% |
| !! | GATGTTTTTGTCCTAGAGAA+GGG | + | tig0024373:76764-76783 | Msa1416730:CDS | 35.0% |
| GTTCATGGAACTTAAAGATG+AGG | + | tig0024373:76820-76839 | Msa1416730:CDS | 35.0% | |
| TGCATTGTCTTCTACATCAT+CGG | + | tig0024373:76898-76917 | Msa1416730:CDS | 35.0% | |
| AAAGTCTTAACCACAAAGTG+AGG | + | tig0024373:76933-76952 | Msa1416730:CDS | 35.0% | |
| ! | TTCATTTTCTCCTCACTTTG+TGG | - | tig0024373:76946-76965 | None:intergenic | 35.0% |
| GCAACTACTCTTGAACAAAA+TGG | - | tig0024373:76971-76990 | None:intergenic | 35.0% | |
| ! | CACATGTTCATTGTTGGTTG+AGG | - | tig0024373:74127-74146 | None:intergenic | 40.0% |
| CTCAACCAACAATGAACATG+TGG | + | tig0024373:74125-74144 | Msa1416730:CDS | 40.0% | |
| CATTGCCACATGTTCATTGT+TGG | - | tig0024373:74133-74152 | None:intergenic | 40.0% | |
| CAACAATGAACATGTGGCAA+TGG | + | tig0024373:74131-74150 | Msa1416730:CDS | 40.0% | |
| GTGAGTTTGAATAAGCTCAG+TGG | + | tig0024373:74168-74187 | Msa1416730:CDS | 40.0% | |
| TCATATCCAACACTACCACA+AGG | - | tig0024373:74395-74414 | None:intergenic | 40.0% | |
| ! | TCAACACATGTTGTCACTTC+TGG | - | tig0024373:74473-74492 | None:intergenic | 40.0% |
| ! | CCCTGCTATCAATTTTGCTT+TGG | + | tig0024373:74520-74539 | Msa1416730:CDS | 40.0% |
| GCACAAGAAAATGACGCTTA+AGG | - | tig0024373:74619-74638 | None:intergenic | 40.0% | |
| AGAGCAAATCTGACAAGTTC+AGG | + | tig0024373:74678-74697 | Msa1416730:intron | 40.0% | |
| GAGCAAATCTGACAAGTTCA+GGG | + | tig0024373:74679-74698 | Msa1416730:intron | 40.0% | |
| TCAGGGTCCATATTGTGAAA+TGG | + | tig0024373:74696-74715 | Msa1416730:intron | 40.0% | |
| AGAATTCAGCCAAAATGCCT+AGG | - | tig0024373:74787-74806 | None:intergenic | 40.0% | |
| CCAACACAGGAAAACAGATT+TGG | - | tig0024373:75135-75154 | None:intergenic | 40.0% | |
| ! | CCAAATCTGTTTTCCTGTGT+TGG | + | tig0024373:75132-75151 | Msa1416730:intron | 40.0% |
| GCCTATTCCATATAGCACAA+AGG | - | tig0024373:75210-75229 | None:intergenic | 40.0% | |
| TTGTGCTATATGGAATAGGC+CGG | + | tig0024373:75210-75229 | Msa1416730:intron | 40.0% | |
| ATTGCATTCAGAGAGTCGTA+AGG | + | tig0024373:75393-75412 | Msa1416730:CDS | 40.0% | |
| !! | ATTGCATCTGGTGTTGATTC+CGG | - | tig0024373:75503-75522 | None:intergenic | 40.0% |
| CTCTTATCATTCACAGTCAC+AGG | - | tig0024373:75536-75555 | None:intergenic | 40.0% | |
| !! | CTGTGAATGATAAGAGTGTC+AGG | + | tig0024373:75540-75559 | Msa1416730:CDS | 40.0% |
| GAGTGTCAGGAAAATCCTTA+AGG | + | tig0024373:75553-75572 | Msa1416730:CDS | 40.0% | |
| CAGGAAAATCCTTAAGGCAT+TGG | + | tig0024373:75559-75578 | Msa1416730:CDS | 40.0% | |
| ACAAGCATAGTGTAGTGCAT+AGG | - | tig0024373:75654-75673 | None:intergenic | 40.0% | |
| ATTCTCCTTAAGAATCCTCG+TGG | + | tig0024373:75728-75747 | Msa1416730:CDS | 40.0% | |
| TGTATCCACGAGGATTCTTA+AGG | - | tig0024373:75736-75755 | None:intergenic | 40.0% | |
| TAAGAATCCTCGTGGATACA+CGG | + | tig0024373:75736-75755 | Msa1416730:CDS | 40.0% | |
| AATAGTGCAACCAAGATGGA+TGG | - | tig0024373:75791-75810 | None:intergenic | 40.0% | |
| CAATTTGTCAGAGATTGACG+AGG | + | tig0024373:75864-75883 | Msa1416730:CDS | 40.0% | |
| ATCATGAAAAAACGGTGCAG+GGG | + | tig0024373:75897-75916 | Msa1416730:CDS | 40.0% | |
| ATGTTGCAGTTGCATTTGCT+AGG | + | tig0024373:76382-76401 | Msa1416730:intron | 40.0% | |
| ! | TGCAAGTTCAACAGCTTTGA+AGG | + | tig0024373:76470-76489 | Msa1416730:CDS | 40.0% |
| !! | GCAAGTTCAACAGCTTTGAA+GGG | + | tig0024373:76471-76490 | Msa1416730:CDS | 40.0% |
| TGTGTACAGTTGAGAATGGT+AGG | + | tig0024373:76684-76703 | Msa1416730:intron | 40.0% | |
| GTATCTAGACGATGATATGC+CGG | + | tig0024373:76742-76761 | Msa1416730:CDS | 40.0% | |
| !! | GGATGTTTTTGTCCTAGAGA+AGG | + | tig0024373:76763-76782 | Msa1416730:CDS | 40.0% |
| ! | TTTTGTCCTAGAGAAGGGAA+CGG | + | tig0024373:76769-76788 | Msa1416730:CDS | 40.0% |
| ACTTAAAGATGAGGTGCAGA+AGG | + | tig0024373:76829-76848 | Msa1416730:CDS | 40.0% | |
| !! | GAAGGCATTTCACAAGGATA+TGG | + | tig0024373:76847-76866 | Msa1416730:CDS | 40.0% |
| ATGGCTGAAAATAACCAAGC+AGG | + | tig0024373:76866-76885 | Msa1416730:CDS | 40.0% | |
| ATGCAGATGAAAAACCTGCT+TGG | - | tig0024373:76883-76902 | None:intergenic | 40.0% | |
| !! | GATGAAGATTTGGTGCCTTG+TGG | + | tig0024373:74377-74396 | Msa1416730:intron | 45.0% |
| ! | ACACATGTTGTCACTTCTGG+TGG | - | tig0024373:74470-74489 | None:intergenic | 45.0% |
| ! | AGTCGGATACCTAGGCATTT+TGG | + | tig0024373:74775-74794 | Msa1416730:intron | 45.0% |
| GAATGCAATGAGAGAGAAGC+TGG | - | tig0024373:75382-75401 | None:intergenic | 45.0% | |
| GGAATCAACACCAGATGCAA+TGG | + | tig0024373:75502-75521 | Msa1416730:CDS | 45.0% | |
| AACACCAGATGCAATGGAAG+TGG | + | tig0024373:75508-75527 | Msa1416730:CDS | 45.0% | |
| ACGAAAGGATCCATCCATCT+TGG | + | tig0024373:75778-75797 | Msa1416730:CDS | 45.0% | |
| GCATCAGAAACCACTCTTGA+TGG | + | tig0024373:75827-75846 | Msa1416730:CDS | 45.0% | |
| AGCAGTTTGTCCATCAAGAG+TGG | - | tig0024373:75840-75859 | None:intergenic | 45.0% | |
| ! | CTTTTTCCCGCATTGTTCTG+AGG | + | tig0024373:76709-76728 | Msa1416730:CDS | 45.0% |
| TCAAGCACCTCAGAACAATG+CGG | - | tig0024373:76719-76738 | None:intergenic | 45.0% | |
| AGCAGAGAACGAAGAAAGCA+CGG | + | tig0024373:76798-76817 | Msa1416730:CDS | 45.0% | |
| ! | AACGAAGAAAGCACGGTTCA+TGG | + | tig0024373:76805-76824 | Msa1416730:CDS | 45.0% |
| TACATCATCGGCAAGTCGTA+GGG | + | tig0024373:76910-76929 | Msa1416730:CDS | 45.0% | |
| AGGATGGAAAGGGAAAGCCA+AGG | + | tig0024373:74346-74365 | Msa1416730:CDS | 50.0% | |
| ! | TTGGTGCCTTGTGGTAGTGT+TGG | + | tig0024373:74386-74405 | Msa1416730:intron | 50.0% |
| ! | CATGTTGTCACTTCTGGTGG+TGG | - | tig0024373:74467-74486 | None:intergenic | 50.0% |
| ATGCATGAGATGGTGACTGC+AGG | + | tig0024373:75105-75124 | Msa1416730:intron | 50.0% | |
| GAGAGTCGTAAGGTCTGACA+TGG | + | tig0024373:75403-75422 | Msa1416730:CDS | 50.0% | |
| ATTCCGGCAGAGATTGGACT+CGG | - | tig0024373:75487-75506 | None:intergenic | 50.0% | |
| !! | GTGTTGATTCCGGCAGAGAT+TGG | - | tig0024373:75493-75512 | None:intergenic | 50.0% |
| GGTTCCACTTCCATTGCATC+TGG | - | tig0024373:75515-75534 | None:intergenic | 50.0% | |
| CGTCAGAGTCCAATGCCTTA+AGG | - | tig0024373:75571-75590 | None:intergenic | 50.0% | |
| TGAAGAACCGTGTATCCACG+AGG | - | tig0024373:75746-75765 | None:intergenic | 50.0% | |
| GGATGGATCCTTTCGTCTTG+CGG | - | tig0024373:75774-75793 | None:intergenic | 50.0% | |
| TCAGAGATTGACGAGGCGAA+AGG | + | tig0024373:75871-75890 | Msa1416730:CDS | 50.0% | |
| TGAAAAAACGGTGCAGGGGA+AGG | + | tig0024373:75901-75920 | Msa1416730:CDS | 50.0% | |
| GGAAGGAGTCTCACAAGGAT+AGG | + | tig0024373:75918-75937 | Msa1416730:CDS | 50.0% | |
| TAGGCTGTTCTTTCCTGCTG+AGG | + | tig0024373:76401-76420 | Msa1416730:CDS | 50.0% | |
| TGTTCTTTCCTGCTGAGGCA+AGG | + | tig0024373:76406-76425 | Msa1416730:CDS | 50.0% | |
| GTTCTTTCCTGCTGAGGCAA+GGG | + | tig0024373:76407-76426 | Msa1416730:CDS | 50.0% | |
| AGGGTAGCCATAGAGAATGC+TGG | + | tig0024373:76426-76445 | Msa1416730:CDS | 50.0% | |
| GGGTAGCCATAGAGAATGCT+GGG | + | tig0024373:76427-76446 | Msa1416730:CDS | 50.0% | |
| GGTAGCCATAGAGAATGCTG+GGG | + | tig0024373:76428-76447 | Msa1416730:CDS | 50.0% | |
| ATCTGCCCCAGCATTCTCTA+TGG | - | tig0024373:76436-76455 | None:intergenic | 50.0% | |
| GCTGTTGAACTTGCATAGCG+TGG | - | tig0024373:76465-76484 | None:intergenic | 50.0% | |
| CAAGCACCTCAGAACAATGC+GGG | - | tig0024373:76718-76737 | None:intergenic | 50.0% | |
| CTTCTTCCGTTCCCTTCTCT+AGG | - | tig0024373:76778-76797 | None:intergenic | 50.0% | |
| !! | GGTGCAGAAGGCATTTCACA+AGG | + | tig0024373:76841-76860 | Msa1416730:CDS | 50.0% |
| CTACATCATCGGCAAGTCGT+AGG | + | tig0024373:76909-76928 | Msa1416730:CDS | 50.0% | |
| CTAGGTATCCGACTGCAGAG+CGG | - | tig0024373:74769-74788 | None:intergenic | 55.0% | |
| GACGGCGTGAATGCATGAGA+TGG | + | tig0024373:75095-75114 | Msa1416730:intron | 55.0% | |
| TCACGTTGCCGCAAGACGAA+AGG | + | tig0024373:75763-75782 | Msa1416730:CDS | 55.0% | |
| TACTGCAGCCGCTCTGCAGT+CGG | + | tig0024373:74758-74777 | Msa1416730:intron | 60.0% | |
| CGCTCTGCAGTCGGATACCT+AGG | + | tig0024373:74767-74786 | Msa1416730:intron | 60.0% | |
| CGGCAGAGATTGGACTCGGA+GGG | - | tig0024373:75483-75502 | None:intergenic | 60.0% | |
| CCTCCGAGTCCAATCTCTGC+CGG | + | tig0024373:75481-75500 | Msa1416730:CDS | 60.0% | |
| GCAGGGGAAGGAGTCTCACA+AGG | + | tig0024373:75913-75932 | Msa1416730:CDS | 60.0% | |
| ATGGCTACCCTTGCCTCAGC+AGG | - | tig0024373:76417-76436 | None:intergenic | 60.0% | |
| CCGGCAGAGATTGGACTCGG+AGG | - | tig0024373:75484-75503 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024373 | gene | 74033 | 77233 | 74033 | ID=Msa1416730;Name=Msa1416730 |
| tig0024373 | mRNA | 74033 | 77233 | 74033 | ID=Msa1416730-mRNA-1;Parent=Msa1416730;Name=Msa1416730-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.75|0.6|1|1|1|5|269|585 |
| tig0024373 | exon | 74033 | 74367 | 74033 | ID=Msa1416730-mRNA-1:exon:23008;Parent=Msa1416730-mRNA-1 |
| tig0024373 | exon | 74403 | 74598 | 74403 | ID=Msa1416730-mRNA-1:exon:23009;Parent=Msa1416730-mRNA-1 |
| tig0024373 | exon | 75296 | 76061 | 75296 | ID=Msa1416730-mRNA-1:exon:23010;Parent=Msa1416730-mRNA-1 |
| tig0024373 | exon | 76391 | 76579 | 76391 | ID=Msa1416730-mRNA-1:exon:23011;Parent=Msa1416730-mRNA-1 |
| tig0024373 | exon | 76693 | 77233 | 76693 | ID=Msa1416730-mRNA-1:exon:23012;Parent=Msa1416730-mRNA-1 |
| tig0024373 | CDS | 74033 | 74367 | 74033 | ID=Msa1416730-mRNA-1:cds;Parent=Msa1416730-mRNA-1 |
| tig0024373 | CDS | 74403 | 74598 | 74403 | ID=Msa1416730-mRNA-1:cds;Parent=Msa1416730-mRNA-1 |
| tig0024373 | CDS | 75296 | 76061 | 75296 | ID=Msa1416730-mRNA-1:cds;Parent=Msa1416730-mRNA-1 |
| tig0024373 | CDS | 76391 | 76579 | 76391 | ID=Msa1416730-mRNA-1:cds;Parent=Msa1416730-mRNA-1 |
| tig0024373 | CDS | 76693 | 76964 | 76693 | ID=Msa1416730-mRNA-1:cds;Parent=Msa1416730-mRNA-1 |
| tig0024373 | three_prime_UTR | 76965 | 77233 | 76965 | ID=Msa1416730-mRNA-1:three_prime_utr;Parent=Msa1416730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
