Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084640 | XP_003617362.1 | 95.791 | 594 | 25 | 0 | 1 | 594 | 1 | 594 | 0.0 | 1121 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084640 | sp|E7BQV0|NPR1_MALHU | 58.152 | 552 | 221 | 5 | 18 | 567 | 18 | 561 | 0.0 | 612 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084640 | G7K396 | 95.791 | 594 | 25 | 0 | 1 | 594 | 1 | 594 | 0.0 | 1121 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1084640 | TR | TRAF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0023060 | Msa1084640 | 0.801853 | 7.401550e-49 | -8.615850e-47 |
| Msa0043740 | Msa1084640 | 0.804112 | 2.526148e-49 | -8.615850e-47 |
| Msa0051050 | Msa1084640 | 0.816233 | 6.147016e-52 | -8.615850e-47 |
| Msa0090090 | Msa1084640 | 0.816030 | 6.821770e-52 | -8.615850e-47 |
| Msa0092410 | Msa1084640 | 0.835438 | 1.677903e-56 | -8.615850e-47 |
| Msa0101240 | Msa1084640 | 0.818347 | 2.055541e-52 | -8.615850e-47 |
| Msa0614380 | Msa1084640 | 0.858788 | 6.474814e-63 | -8.615850e-47 |
| Msa0614920 | Msa1084640 | 0.803885 | 2.816203e-49 | -8.615850e-47 |
| Msa0662580 | Msa1084640 | 0.815624 | 8.403517e-52 | -8.615850e-47 |
| Msa0697010 | Msa1084640 | 0.801235 | 9.909242e-49 | -8.615850e-47 |
| Msa0697590 | Msa1084640 | 0.819234 | 1.292655e-52 | -8.615850e-47 |
| Msa0708310 | Msa1084640 | 0.830558 | 2.745029e-55 | -8.615850e-47 |
| Msa0733010 | Msa1084640 | 0.837044 | 6.556315e-57 | -8.615850e-47 |
| Msa0734250 | Msa1084640 | 0.800941 | 1.137667e-48 | -8.615850e-47 |
| Msa0742210 | Msa1084640 | 0.805929 | 1.052815e-49 | -8.615850e-47 |
| Msa0742430 | Msa1084640 | 0.827238 | 1.747058e-54 | -8.615850e-47 |
| Msa0753930 | Msa1084640 | 0.807869 | 4.093853e-50 | -8.615850e-47 |
| Msa0769300 | Msa1084640 | 0.800815 | 1.207590e-48 | -8.615850e-47 |
| Msa0773990 | Msa1084640 | 0.827517 | 1.497340e-54 | -8.615850e-47 |
| Msa0782960 | Msa1084640 | 0.813571 | 2.392391e-51 | -8.615850e-47 |
| Msa0785120 | Msa1084640 | 0.822143 | 2.772912e-53 | -8.615850e-47 |
| Msa0786980 | Msa1084640 | 0.948093 | 1.867210e-106 | -8.615850e-47 |
| Msa0794210 | Msa1084640 | 0.807119 | 5.906408e-50 | -8.615850e-47 |
| Msa0822350 | Msa1084640 | 0.946518 | 3.958539e-105 | -8.615850e-47 |
| Msa0823540 | Msa1084640 | 0.824600 | 7.392151e-54 | -8.615850e-47 |
| Msa0828240 | Msa1084640 | 0.815201 | 1.043626e-51 | -8.615850e-47 |
| Msa0137560 | Msa1084640 | 0.806979 | 6.321690e-50 | -8.615850e-47 |
| Msa0227340 | Msa1084640 | 0.806170 | 9.369999e-50 | -8.615850e-47 |
| Msa0371460 | Msa1084640 | 0.833228 | 6.016924e-56 | -8.615850e-47 |
| Msa0408340 | Msa1084640 | 0.880781 | 4.138003e-70 | -8.615850e-47 |
| Msa0419670 | Msa1084640 | 0.840756 | 7.180419e-58 | -8.615850e-47 |
| Msa0443020 | Msa1084640 | 0.854561 | 1.134228e-61 | -8.615850e-47 |
| Msa0450180 | Msa1084640 | 0.810609 | 1.058585e-50 | -8.615850e-47 |
| Msa0463270 | Msa1084640 | 0.825899 | 3.644295e-54 | -8.615850e-47 |
| Msa0480930 | Msa1084640 | 0.809765 | 1.609308e-50 | -8.615850e-47 |
| Msa0992640 | Msa1084640 | 0.838932 | 2.143479e-57 | -8.615850e-47 |
| Msa0992680 | Msa1084640 | 0.841115 | 5.778972e-58 | -8.615850e-47 |
| Msa0999680 | Msa1084640 | 0.820394 | 7.022120e-53 | -8.615850e-47 |
| Msa1017160 | Msa1084640 | 0.802911 | 4.479994e-49 | -8.615850e-47 |
| Msa1043120 | Msa1084640 | 0.883270 | 5.170422e-71 | -8.615850e-47 |
| Msa1084640 | Msa1120930 | 0.812470 | 4.171244e-51 | -8.615850e-47 |
| Msa1084640 | Msa1207890 | 0.810312 | 1.227175e-50 | -8.615850e-47 |
| Msa1084640 | Msa1281690 | 0.816664 | 4.921972e-52 | -8.615850e-47 |
| Msa1084640 | Msa1325060 | 0.801978 | 6.976021e-49 | -8.615850e-47 |
| Msa1084640 | Msa1353890 | 0.827684 | 1.365229e-54 | -8.615850e-47 |
| Msa1084640 | Msa1360420 | 0.821243 | 4.478830e-53 | -8.615850e-47 |
| Msa1084640 | Msa1383680 | 0.814194 | 1.743947e-51 | -8.615850e-47 |
| Msa1084640 | Msa1398900 | 0.814658 | 1.376962e-51 | -8.615850e-47 |
| Msa1084640 | Msa1400340 | 0.999011 | 6.410677e-286 | -8.615850e-47 |
| Msa1084640 | Msa1408180 | 0.800656 | 1.301236e-48 | -8.615850e-47 |
| Msa1084640 | Msa1416730 | 0.988408 | 6.686501e-174 | -8.615850e-47 |
| Msa1084640 | Msa1418280 | 0.800785 | 1.224298e-48 | -8.615850e-47 |
| Msa1084640 | Msa1424630 | 0.806136 | 9.525735e-50 | -8.615850e-47 |
| Msa1084640 | Msa1430550 | 0.860188 | 2.458858e-63 | -8.615850e-47 |
| Msa1084640 | Msa1439650 | 0.812809 | 3.516545e-51 | -8.615850e-47 |
| Msa1084640 | Msa1448980 | 0.800327 | 1.518508e-48 | -8.615850e-47 |
| Msa0244880 | Msa1084640 | 0.825001 | 5.945768e-54 | -8.615850e-47 |
| Msa0244890 | Msa1084640 | 0.830967 | 2.179660e-55 | -8.615850e-47 |
| Msa0244900 | Msa1084640 | 0.814788 | 1.288831e-51 | -8.615850e-47 |
| Msa0264830 | Msa1084640 | 0.806516 | 7.920329e-50 | -8.615850e-47 |
| Msa0267790 | Msa1084640 | 0.809867 | 1.529926e-50 | -8.615850e-47 |
| Msa0269560 | Msa1084640 | 0.846254 | 2.437380e-59 | -8.615850e-47 |
| Msa0271540 | Msa1084640 | 0.801749 | 7.775626e-49 | -8.615850e-47 |
| Msa0271550 | Msa1084640 | 0.803102 | 4.092471e-49 | -8.615850e-47 |
| Msa0283470 | Msa1084640 | 0.837514 | 4.970830e-57 | -8.615850e-47 |
| Msa0283490 | Msa1084640 | 0.817431 | 3.309878e-52 | -8.615850e-47 |
| Msa0283500 | Msa1084640 | 0.833230 | 6.008238e-56 | -8.615850e-47 |
| Msa0302870 | Msa1084640 | 0.815856 | 7.459315e-52 | -8.615850e-47 |
| Msa0305840 | Msa1084640 | 0.824864 | 6.407204e-54 | -8.615850e-47 |
| Msa0331980 | Msa1084640 | 0.835229 | 1.894570e-56 | -8.615850e-47 |
| Msa0333650 | Msa1084640 | 0.801073 | 1.069612e-48 | -8.615850e-47 |
| Msa0340340 | Msa1084640 | 0.809226 | 2.100736e-50 | -8.615850e-47 |
| Msa0348550 | Msa1084640 | 0.821164 | 4.669511e-53 | -8.615850e-47 |
| Msa0490380 | Msa1084640 | 0.838655 | 2.528074e-57 | -8.615850e-47 |
| Msa0501410 | Msa1084640 | 0.854321 | 1.330287e-61 | -8.615850e-47 |
| Msa0506860 | Msa1084640 | 0.846602 | 1.959276e-59 | -8.615850e-47 |
| Msa0508880 | Msa1084640 | 0.807161 | 5.786492e-50 | -8.615850e-47 |
| Msa0511620 | Msa1084640 | 0.843094 | 1.730444e-58 | -8.615850e-47 |
| Msa0546520 | Msa1084640 | 0.805623 | 1.220792e-49 | -8.615850e-47 |
| Msa0562570 | Msa1084640 | 0.812836 | 3.470246e-51 | -8.615850e-47 |
| Msa0574600 | Msa1084640 | 0.815539 | 8.779372e-52 | -8.615850e-47 |
| Msa0862620 | Msa1084640 | 0.842318 | 2.783145e-58 | -8.615850e-47 |
| Msa0865970 | Msa1084640 | 0.806013 | 1.010662e-49 | -8.615850e-47 |
| Msa0866070 | Msa1084640 | 0.805127 | 1.551094e-49 | -8.615850e-47 |
| Msa0899970 | Msa1084640 | 0.804558 | 2.038877e-49 | -8.615850e-47 |
| Msa0958080 | Msa1084640 | 0.822904 | 1.845637e-53 | -8.615850e-47 |
| Msa0965290 | Msa1084640 | 0.816170 | 6.349506e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084640 | MtrunA17_Chr5g0442661 | 95.791 | 594 | 25 | 0 | 1 | 594 | 1 | 594 | 0.0 | 1121 |
| Msa1084640 | MtrunA17_Chr2g0291741 | 59.891 | 551 | 212 | 4 | 18 | 565 | 19 | 563 | 0.0 | 669 |
| Msa1084640 | MtrunA17_Chr2g0299621 | 39.367 | 569 | 313 | 11 | 10 | 565 | 6 | 555 | 8.84e-121 | 369 |
| Msa1084640 | MtrunA17_Chr1g0171771 | 32.300 | 387 | 227 | 9 | 54 | 408 | 2 | 385 | 2.36e-49 | 178 |
| Msa1084640 | MtrunA17_Chr7g0256321 | 32.877 | 365 | 221 | 9 | 66 | 408 | 24 | 386 | 3.34e-48 | 175 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084640 | AT5G45110.1 | 52.820 | 532 | 231 | 6 | 42 | 562 | 35 | 557 | 0.0 | 550 |
| Msa1084640 | AT4G19660.1 | 52.007 | 548 | 228 | 9 | 33 | 562 | 20 | 550 | 0.0 | 525 |
| Msa1084640 | AT4G19660.2 | 49.565 | 575 | 228 | 10 | 33 | 562 | 20 | 577 | 4.65e-175 | 509 |
| Msa1084640 | AT5G45110.2 | 51.915 | 470 | 210 | 5 | 42 | 504 | 35 | 495 | 3.47e-164 | 478 |
| Msa1084640 | AT1G64280.1 | 37.925 | 559 | 320 | 8 | 23 | 565 | 15 | 562 | 1.41e-114 | 354 |
| Msa1084640 | AT4G26120.2 | 37.543 | 586 | 337 | 12 | 16 | 590 | 16 | 583 | 8.57e-112 | 347 |
| Msa1084640 | AT4G26120.1 | 37.543 | 586 | 337 | 12 | 16 | 590 | 15 | 582 | 9.48e-112 | 347 |
| Msa1084640 | AT3G57130.1 | 32.300 | 387 | 241 | 9 | 40 | 408 | 1 | 384 | 1.21e-51 | 184 |
| Msa1084640 | AT2G41370.1 | 32.703 | 370 | 219 | 9 | 66 | 408 | 25 | 391 | 4.89e-48 | 175 |
| Msa1084640 | AT3G57130.2 | 31.737 | 167 | 101 | 4 | 40 | 197 | 1 | 163 | 2.63e-18 | 83.6 |
Find 129 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACTTTCTCTTTCCTTTCT+TGG | 0.106064 | 7_2:-85060726 | Msa1084640:five_prime_UTR |
| CAAGGGATTGTAATCTTAAT+TGG | 0.155412 | 7_2:+85057601 | None:intergenic |
| TTTCTTGGTCATGGCTTCTT+TGG | 0.210120 | 7_2:-85060711 | Msa1084640:five_prime_UTR |
| AATTGTTTGACATGGTTTCT+AGG | 0.213691 | 7_2:+85056983 | None:intergenic |
| GAGCCTTGTCAACAAAATTT+AGG | 0.226635 | 7_2:+85058839 | None:intergenic |
| TGACATGGACATCATATATT+TGG | 0.235777 | 7_2:-85058725 | Msa1084640:CDS |
| TAGAACCCCTTAAGCATTCT+TGG | 0.238659 | 7_2:-85060677 | Msa1084640:five_prime_UTR |
| TTTGTATACTGGAAAGTTAA+AGG | 0.276961 | 7_2:-85059705 | Msa1084640:CDS |
| AAAGCAACATAGCATCTTAT+TGG | 0.277580 | 7_2:+85057093 | None:intergenic |
| TTCTTGCATTATTTGTATAC+TGG | 0.287135 | 7_2:-85059716 | Msa1084640:CDS |
| AGTAGTTGCTATATAAGTTT+TGG | 0.295240 | 7_2:-85057166 | Msa1084640:three_prime_UTR |
| GCAACTACTCTTGAACAAAA+TGG | 0.299646 | 7_2:+85057180 | None:intergenic |
| TCAACACATGTTGTCACTTC+TGG | 0.315551 | 7_2:+85059674 | None:intergenic |
| TCATGGCTTCTTTGGTTGAA+TGG | 0.319082 | 7_2:-85060703 | Msa1084640:five_prime_UTR |
| ATAACCATGTAATATAATTA+AGG | 0.321063 | 7_2:-85057016 | Msa1084640:three_prime_UTR |
| TGATGTGCAGCCATTAAAAT+TGG | 0.325931 | 7_2:+85058799 | None:intergenic |
| AGGAAAAGATGAAGAAGTTA+AGG | 0.328401 | 7_2:-85059816 | Msa1084640:CDS |
| TTGTGCATATTGTGATTCTA+AGG | 0.357367 | 7_2:-85058479 | Msa1084640:CDS |
| CATTGCCACATGTTCATTGT+TGG | 0.365929 | 7_2:+85060012 | None:intergenic |
| TCTCTTTCCTTTCTTGGTCA+TGG | 0.367151 | 7_2:-85060720 | Msa1084640:five_prime_UTR |
| GCATCAGAAACCACTCTTGA+TGG | 0.370481 | 7_2:-85058322 | Msa1084640:CDS |
| AAATGATGAGAGAGATTGTT+TGG | 0.375136 | 7_2:+85060775 | None:intergenic |
| AAAGTCTTCAATTGAGTCAA+TGG | 0.377354 | 7_2:+85060147 | None:intergenic |
| TATACAAAGATAGAAATATA+TGG | 0.381162 | 7_2:+85060643 | None:intergenic |
| GTTCAAGAAGTTCTTACTCT+TGG | 0.391310 | 7_2:-85058454 | Msa1084640:CDS |
| AACGAAGAAAGCACGGTTCA+TGG | 0.394343 | 7_2:-85057343 | Msa1084640:CDS |
| AGTCCATTGGGAGAAATTAC+AGG | 0.395594 | 7_2:+85056929 | None:intergenic |
| TGGTATTCATCGATGTATAT+TGG | 0.399098 | 7_2:-85059876 | Msa1084640:CDS |
| ATCTGCCCCAGCATTCTCTA+TGG | 0.400544 | 7_2:+85057716 | None:intergenic |
| CGTCAGAGTCCAATGCCTTA+AGG | 0.406730 | 7_2:+85058575 | None:intergenic |
| TGCAAGTTCAACAGCTTTGA+AGG | 0.409850 | 7_2:-85057679 | Msa1084640:CDS |
| AAGGTATCTCATGAAAGATT+TGG | 0.411203 | 7_2:-85059777 | Msa1084640:CDS |
| GGTTCCACTTCCATTGCATC+TGG | 0.423349 | 7_2:+85058631 | None:intergenic |
| ATTGCATCTGGTGTTGATTC+CGG | 0.423636 | 7_2:+85058643 | None:intergenic |
| GAAGGCATTTCACAAGGATA+TGG | 0.425039 | 7_2:-85057301 | Msa1084640:CDS |
| GACTCAGTTACCAACATCAT+TGG | 0.426624 | 7_2:-85060798 | Msa1084640:five_prime_UTR |
| CTTCTTCCGTTCCCTTCTCT+AGG | 0.435165 | 7_2:+85057373 | None:intergenic |
| AAAGAAGCCATGACCAAGAA+AGG | 0.450044 | 7_2:+85060713 | None:intergenic |
| CTTTGATTTACTTGAGGTCA+TGG | 0.459651 | 7_2:-85060128 | Msa1084640:exon |
| CATCTTCAATCTCAAATCAA+AGG | 0.462304 | 7_2:-85060529 | Msa1084640:five_prime_UTR |
| GTGTTGATTCCGGCAGAGAT+TGG | 0.467675 | 7_2:+85058653 | None:intergenic |
| TCCAAAGCAAAATTGATAGC+AGG | 0.467829 | 7_2:+85059623 | None:intergenic |
| ATCTTCAATCTCAAATCAAA+GGG | 0.468826 | 7_2:-85060528 | Msa1084640:five_prime_UTR |
| TGTTGGTAACTGAGTCTAAT+GGG | 0.469273 | 7_2:+85060805 | None:intergenic |
| TTTGCACCAAGAATGCTTAA+GGG | 0.475059 | 7_2:+85060671 | None:intergenic |
| TGTTCTTTCCTGCTGAGGCA+AGG | 0.476184 | 7_2:-85057743 | Msa1084640:CDS |
| TGTATCCACGAGGATTCTTA+AGG | 0.478040 | 7_2:+85058416 | None:intergenic |
| ATGGCTACCCTTGCCTCAGC+AGG | 0.479921 | 7_2:+85057735 | None:intergenic |
| AGTTCCTTAATTATATTACA+TGG | 0.483900 | 7_2:+85057012 | None:intergenic |
| AGAAGTTCTTACTCTTGGAT+TGG | 0.484032 | 7_2:-85058449 | Msa1084640:CDS |
| AAATCTTTCATGAGATACCT+TGG | 0.484404 | 7_2:+85059779 | None:intergenic |
| CTCTTATCATTCACAGTCAC+AGG | 0.484685 | 7_2:+85058610 | None:intergenic |
| GTTCTTTCCTGCTGAGGCAA+GGG | 0.487551 | 7_2:-85057742 | Msa1084640:CDS |
| AAAGATGAAGAAGTTAAGGA+TGG | 0.488807 | 7_2:-85059812 | Msa1084640:CDS |
| CTGTGAATGATAAGAGTGTC+AGG | 0.490919 | 7_2:-85058603 | Msa1084640:CDS |
| ATGTTGGTAACTGAGTCTAA+TGG | 0.492568 | 7_2:+85060804 | None:intergenic |
| GAGTGTCAGGAAAATCCTTA+AGG | 0.494210 | 7_2:-85058590 | Msa1084640:CDS |
| CACATGTTCATTGTTGGTTG+AGG | 0.498708 | 7_2:+85060018 | None:intergenic |
| TTGGTGCCTTGTGGTAGTGT+TGG | 0.499790 | 7_2:-85059758 | Msa1084640:CDS |
| AGTTACAACACTACATCAAA+AGG | 0.500386 | 7_2:+85057143 | None:intergenic |
| CAGGAAAATCCTTAAGGCAT+TGG | 0.500644 | 7_2:-85058584 | Msa1084640:CDS |
| GGGTAGCCATAGAGAATGCT+GGG | 0.504854 | 7_2:-85057722 | Msa1084640:CDS |
| CCTCCGAGTCCAATCTCTGC+CGG | 0.505391 | 7_2:-85058662 | Msa1084640:CDS |
| TGAAGAAGTTAAGGATGGAA+AGG | 0.507059 | 7_2:-85059807 | Msa1084640:CDS |
| ATACATCGATGAATACCAAC+AGG | 0.509934 | 7_2:+85059881 | None:intergenic |
| GAAGAAGTTAAGGATGGAAA+GGG | 0.513248 | 7_2:-85059806 | Msa1084640:CDS |
| AGGGTAGCCATAGAGAATGC+TGG | 0.515215 | 7_2:-85057723 | Msa1084640:CDS |
| TTTCAATAGTGCAACCAAGA+TGG | 0.516370 | 7_2:+85058357 | None:intergenic |
| TGCATTGTCTTCTACATCAT+CGG | 0.516416 | 7_2:-85057250 | Msa1084640:CDS |
| TACATCATCGGCAAGTCGTA+GGG | 0.521228 | 7_2:-85057238 | Msa1084640:CDS |
| ACGAAAGGATCCATCCATCT+TGG | 0.521666 | 7_2:-85058371 | Msa1084640:CDS |
| TCACGTTGCCGCAAGACGAA+AGG | 0.524031 | 7_2:-85058386 | Msa1084640:CDS |
| GAATGCAATGAGAGAGAAGC+TGG | 0.524808 | 7_2:+85058764 | None:intergenic |
| AAGTTCTATGTCAGTGAACA+TGG | 0.525587 | 7_2:-85058173 | Msa1084640:CDS |
| CTACATCATCGGCAAGTCGT+AGG | 0.526560 | 7_2:-85057239 | Msa1084640:CDS |
| AAATTGTGTACAGTTGAGAA+TGG | 0.529000 | 7_2:-85057468 | Msa1084640:intron |
| TGTGTACAGTTGAGAATGGT+AGG | 0.529889 | 7_2:-85057464 | Msa1084640:intron |
| GGATGGATCCTTTCGTCTTG+CGG | 0.530660 | 7_2:+85058378 | None:intergenic |
| CTGGATTACCTTGAAAATAG+AGG | 0.531111 | 7_2:-85058109 | Msa1084640:intron |
| TAGGCTGTTCTTTCCTGCTG+AGG | 0.533770 | 7_2:-85057748 | Msa1084640:CDS |
| AACACCAGATGCAATGGAAG+TGG | 0.536591 | 7_2:-85058635 | Msa1084640:CDS |
| GGAAGGAGTCTCACAAGGAT+AGG | 0.544010 | 7_2:-85058231 | Msa1084640:CDS |
| CTTGTTGAAGAAATTCCTGT+TGG | 0.546823 | 7_2:-85059896 | Msa1084640:CDS |
| ATGTTGCAGTTGCATTTGCT+AGG | 0.553352 | 7_2:-85057767 | Msa1084640:intron |
| GAAAGTGAGACAATGAACTA+AGG | 0.555346 | 7_2:+85060741 | None:intergenic |
| CATCACTCAATAACTTCTCA+AGG | 0.556447 | 7_2:+85059948 | None:intergenic |
| GTATCTAGACGATGATATGC+CGG | 0.557917 | 7_2:-85057406 | Msa1084640:CDS |
| CGGCAGAGATTGGACTCGGA+GGG | 0.559848 | 7_2:+85058663 | None:intergenic |
| TGAAGACTTTGATTTACTTG+AGG | 0.560167 | 7_2:-85060134 | Msa1084640:five_prime_UTR |
| TCAGAGATTGACGAGGCGAA+AGG | 0.561716 | 7_2:-85058278 | Msa1084640:CDS |
| ATTCCGGCAGAGATTGGACT+CGG | 0.564498 | 7_2:+85058659 | None:intergenic |
| AGCAGAGAACGAAGAAAGCA+CGG | 0.564815 | 7_2:-85057350 | Msa1084640:CDS |
| CAAGCACCTCAGAACAATGC+GGG | 0.572417 | 7_2:+85057433 | None:intergenic |
| AATAGTGCAACCAAGATGGA+TGG | 0.572602 | 7_2:+85058361 | None:intergenic |
| ATGGCTGAAAATAACCAAGC+AGG | 0.574550 | 7_2:-85057282 | Msa1084640:CDS |
| TTGAGATGATACAAAACTCA+AGG | 0.576016 | 7_2:+85060078 | None:intergenic |
| GGAATCAACACCAGATGCAA+TGG | 0.582737 | 7_2:-85058641 | Msa1084640:CDS |
| TTGCACCAAGAATGCTTAAG+GGG | 0.583899 | 7_2:+85060672 | None:intergenic |
| CCAAAGCAAAATTGATAGCA+GGG | 0.584439 | 7_2:+85059624 | None:intergenic |
| TGATGATTTACACATGAGAC+TGG | 0.587404 | 7_2:-85058128 | Msa1084640:CDS |
| AGCAGTTTGTCCATCAAGAG+TGG | 0.589661 | 7_2:+85058312 | None:intergenic |
| ACTTAAAGATGAGGTGCAGA+AGG | 0.589892 | 7_2:-85057319 | Msa1084640:CDS |
| CAACAATGAACATGTGGCAA+TGG | 0.591956 | 7_2:-85060011 | Msa1084640:CDS |
| CATGTTGTCACTTCTGGTGG+TGG | 0.593704 | 7_2:+85059680 | None:intergenic |
| GCAACTAAAATTGTTTGACA+TGG | 0.594533 | 7_2:+85056975 | None:intergenic |
| CAATTTGTCAGAGATTGACG+AGG | 0.597048 | 7_2:-85058285 | Msa1084640:CDS |
| GATTGTTTGGCCAATGATGT+TGG | 0.597492 | 7_2:+85060788 | None:intergenic |
| GCAAGTTCAACAGCTTTGAA+GGG | 0.599785 | 7_2:-85057678 | Msa1084640:CDS |
| ATTTCAGTCATAACTTCATG+AGG | 0.607057 | 7_2:+85058691 | None:intergenic |
| GAGAGTCGTAAGGTCTGACA+TGG | 0.616876 | 7_2:-85058740 | Msa1084640:CDS |
| CTCAACCAACAATGAACATG+TGG | 0.620410 | 7_2:-85060017 | Msa1084640:CDS |
| TAAGAATCCTCGTGGATACA+CGG | 0.628927 | 7_2:-85058413 | Msa1084640:CDS |
| ACAAGCATAGTGTAGTGCAT+AGG | 0.635531 | 7_2:+85058498 | None:intergenic |
| GTTCATGGAACTTAAAGATG+AGG | 0.636671 | 7_2:-85057328 | Msa1084640:CDS |
| ATGAAAGATTTGGTGCCTTG+TGG | 0.641714 | 7_2:-85059767 | Msa1084640:CDS |
| AAAGTCTTAACCACAAAGTG+AGG | 0.653570 | 7_2:-85057215 | Msa1084640:CDS |
| CCGGCAGAGATTGGACTCGG+AGG | 0.654889 | 7_2:+85058662 | None:intergenic |
| GCAGGGGAAGGAGTCTCACA+AGG | 0.661433 | 7_2:-85058236 | Msa1084640:CDS |
| ATTGCATTCAGAGAGTCGTA+AGG | 0.666386 | 7_2:-85058750 | Msa1084640:CDS |
| GGTGCAGAAGGCATTTCACA+AGG | 0.668394 | 7_2:-85057307 | Msa1084640:CDS |
| ATTCTCCTTAAGAATCCTCG+TGG | 0.687759 | 7_2:-85058421 | Msa1084640:CDS |
| GTGAGTTTGAATAAGCTCAG+TGG | 0.700757 | 7_2:-85059974 | Msa1084640:CDS |
| ACACATGTTGTCACTTCTGG+TGG | 0.703043 | 7_2:+85059677 | None:intergenic |
| TCAAGCACCTCAGAACAATG+CGG | 0.711186 | 7_2:+85057432 | None:intergenic |
| GCTGTTGAACTTGCATAGCG+TGG | 0.711386 | 7_2:+85057687 | None:intergenic |
| TCATATCCAACACTACCACA+AGG | 0.723097 | 7_2:+85059752 | None:intergenic |
| GGTAGCCATAGAGAATGCTG+GGG | 0.739957 | 7_2:-85057721 | Msa1084640:CDS |
| TGAAGAACCGTGTATCCACG+AGG | 0.741022 | 7_2:+85058406 | None:intergenic |
| AGGATGGAAAGGGAAAGCCA+AGG | 0.758248 | 7_2:-85059796 | Msa1084640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATCTTGAATATATTTAA+TGG | - | chr7_2:85057319-85057338 | Msa1084640:CDS | 10.0% |
| !! | TAATCTTGAATATATTTAAT+GGG | - | chr7_2:85057320-85057339 | Msa1084640:CDS | 10.0% |
| !! | TATACAAAGATAGAAATATA+TGG | + | chr7_2:85057099-85057118 | None:intergenic | 15.0% |
| !! | AGATTAAGAATTAAAAAGTT+TGG | + | chr7_2:85057306-85057325 | None:intergenic | 15.0% |
| !! | AAAATGAGCAATAAAAATAA+AGG | + | chr7_2:85058242-85058261 | None:intergenic | 15.0% |
| !!! | ATTTTATTTATACATTTTGC+AGG | - | chr7_2:85058560-85058579 | Msa1084640:CDS | 15.0% |
| !!! | TATTTCAAATTTTATTCACT+TGG | + | chr7_2:85058618-85058637 | None:intergenic | 15.0% |
| !!! | AAAGTTTCATGAAAATATTT+TGG | + | chr7_2:85059908-85059927 | None:intergenic | 15.0% |
| !! | ATAACCATGTAATATAATTA+AGG | - | chr7_2:85060723-85060742 | Msa1084640:five_prime_UTR | 15.0% |
| !! | TAAAAGAAAAACTACATACA+TGG | + | chr7_2:85057240-85057259 | None:intergenic | 20.0% |
| !! | TAAATGAAATTTAATGACCT+TGG | + | chr7_2:85057271-85057290 | None:intergenic | 20.0% |
| !!! | AAGATTTTCTTATACCATTT+TGG | + | chr7_2:85057358-85057377 | None:intergenic | 20.0% |
| !!! | AAATCTTAGTTTTTGTTTCA+TGG | - | chr7_2:85057371-85057390 | Msa1084640:CDS | 20.0% |
| !!! | TTTCATGAACTTTTTAAGAA+AGG | - | chr7_2:85057903-85057922 | Msa1084640:intron | 20.0% |
| !!! | AATATTTTACGTAGTTTTGT+AGG | + | chr7_2:85058484-85058503 | None:intergenic | 20.0% |
| !! | AAAGGATTATCATGAAAAAA+CGG | - | chr7_2:85059479-85059498 | Msa1084640:intron | 20.0% |
| !!! | AATACTTAATGAATTGATTC+TGG | + | chr7_2:85059837-85059856 | None:intergenic | 20.0% |
| !!! | TTTCATGAAACTTTTGAATT+TGG | - | chr7_2:85059914-85059933 | Msa1084640:CDS | 20.0% |
| !! | AGTTCCTTAATTATATTACA+TGG | + | chr7_2:85060730-85060749 | None:intergenic | 20.0% |
| ! | ATCTTCAATCTCAAATCAAA+GGG | - | chr7_2:85057211-85057230 | Msa1084640:CDS | 25.0% |
| !! | TTTCTTTTAATCTCTTACCA+AGG | - | chr7_2:85057251-85057270 | Msa1084640:CDS | 25.0% |
| !! | ATATTTAATGGGTCATCAAA+TGG | - | chr7_2:85057331-85057350 | Msa1084640:CDS | 25.0% |
| ! | CTAGAAGAATTAGAATATGT+TGG | - | chr7_2:85057486-85057505 | Msa1084640:intron | 25.0% |
| !!! | GAATCTGATTTCTTGTTTTT+TGG | - | chr7_2:85057548-85057567 | Msa1084640:intron | 25.0% |
| ! | TTCTTGCATTATTTGTATAC+TGG | - | chr7_2:85058023-85058042 | Msa1084640:intron | 25.0% |
| ! | TTTGTATACTGGAAAGTTAA+AGG | - | chr7_2:85058034-85058053 | Msa1084640:intron | 25.0% |
| ! | AGCAATAAAAATAAAGGAGA+AGG | + | chr7_2:85058236-85058255 | None:intergenic | 25.0% |
| !! | AGCTTAGGATTTACATTTTA+CGG | + | chr7_2:85058318-85058337 | None:intergenic | 25.0% |
| !!! | GTATGTTTACTTTTGATCTA+GGG | - | chr7_2:85058439-85058458 | Msa1084640:CDS | 25.0% |
| !!! | TATTAGTCTAAGCTAAGTTT+TGG | + | chr7_2:85058523-85058542 | None:intergenic | 25.0% |
| !! | TTTATACATTTTGCAGGTTT+TGG | - | chr7_2:85058566-85058585 | Msa1084640:CDS | 25.0% |
| ! | AGCACATCAAATTTATATGA+AGG | + | chr7_2:85058670-85058689 | None:intergenic | 25.0% |
| ! | ATATAAATTTGATGTGCTGA+CGG | - | chr7_2:85058672-85058691 | Msa1084640:CDS | 25.0% |
| !!! | CTCAAGTTTTTTTTTTCTTC+CGG | + | chr7_2:85058827-85058846 | None:intergenic | 25.0% |
| ! | ACATTAGCTCATTTCAAAAA+AGG | + | chr7_2:85058850-85058869 | None:intergenic | 25.0% |
| !! | AGATGTCATTCCAATTTTAA+TGG | - | chr7_2:85058930-85058949 | Msa1084640:intron | 25.0% |
| !!! | TTCATGAAAATATTTTGGTG+AGG | + | chr7_2:85059903-85059922 | None:intergenic | 25.0% |
| ! | TTGAATTTGGAAGCTTATTA+TGG | - | chr7_2:85059927-85059946 | Msa1084640:CDS | 25.0% |
| ! | ATCTTTATACGAACATCAAA+TGG | - | chr7_2:85060220-85060239 | Msa1084640:intron | 25.0% |
| ! | TCAACTGTACACAATTTAAT+TGG | + | chr7_2:85060268-85060287 | None:intergenic | 25.0% |
| !! | AGTAGTTGCTATATAAGTTT+TGG | - | chr7_2:85060573-85060592 | Msa1084640:five_prime_UTR | 25.0% |
| !!! | CAAACAATTTTAGTTGCAAA+TGG | - | chr7_2:85060770-85060789 | Msa1084640:five_prime_UTR | 25.0% |
| AAATGATGAGAGAGATTGTT+TGG | + | chr7_2:85056967-85056986 | None:intergenic | 30.0% | |
| ! | AATCTCTCTCATCATTTTGT+TGG | - | chr7_2:85056970-85056989 | Msa1084640:three_prime_UTR | 30.0% |
| ! | ATCTCTCTCATCATTTTGTT+GGG | - | chr7_2:85056971-85056990 | Msa1084640:three_prime_UTR | 30.0% |
| CATCTTCAATCTCAAATCAA+AGG | - | chr7_2:85057210-85057229 | Msa1084640:CDS | 30.0% | |
| !! | GTTTTTGTTTCATGGAATGA+TGG | - | chr7_2:85057379-85057398 | Msa1084640:CDS | 30.0% |
| AAAGTCTTCAATTGAGTCAA+TGG | + | chr7_2:85057595-85057614 | None:intergenic | 30.0% | |
| ! | TGAAGACTTTGATTTACTTG+AGG | - | chr7_2:85057605-85057624 | Msa1084640:CDS | 30.0% |
| TTGAGATGATACAAAACTCA+AGG | + | chr7_2:85057664-85057683 | None:intergenic | 30.0% | |
| TGGTATTCATCGATGTATAT+TGG | - | chr7_2:85057863-85057882 | Msa1084640:intron | 30.0% | |
| AGGAAAAGATGAAGAAGTTA+AGG | - | chr7_2:85057923-85057942 | Msa1084640:intron | 30.0% | |
| AAAGATGAAGAAGTTAAGGA+TGG | - | chr7_2:85057927-85057946 | Msa1084640:intron | 30.0% | |
| AAATCTTTCATGAGATACCT+TGG | + | chr7_2:85057963-85057982 | None:intergenic | 30.0% | |
| ! | AAGGTATCTCATGAAAGATT+TGG | - | chr7_2:85057962-85057981 | Msa1084640:intron | 30.0% |
| CCTTTCTAATATTCAAGCTT+AGG | + | chr7_2:85058333-85058352 | None:intergenic | 30.0% | |
| CCTAAGCTTGAATATTAGAA+AGG | - | chr7_2:85058330-85058349 | Msa1084640:CDS | 30.0% | |
| !! | CGTATGTTTACTTTTGATCT+AGG | - | chr7_2:85058438-85058457 | Msa1084640:CDS | 30.0% |
| ACTAATAAGCAACATCAGAT+TGG | - | chr7_2:85058536-85058555 | Msa1084640:CDS | 30.0% | |
| ! | TTCTTTTCCTTTGTGCTATA+TGG | - | chr7_2:85058795-85058814 | Msa1084640:CDS | 30.0% |
| ! | ATATCTTTTTACTGATGCAG+AGG | - | chr7_2:85058872-85058891 | Msa1084640:intron | 30.0% |
| ! | TCTCCTAAATTTTGTTGACA+AGG | - | chr7_2:85058897-85058916 | Msa1084640:intron | 30.0% |
| TGACATGGACATCATATATT+TGG | - | chr7_2:85059014-85059033 | Msa1084640:intron | 30.0% | |
| ATTTCAGTCATAACTTCATG+AGG | + | chr7_2:85059051-85059070 | None:intergenic | 30.0% | |
| ! | GTTACTGAATCTTCTTTTAG+AGG | - | chr7_2:85059194-85059213 | Msa1084640:intron | 30.0% |
| TTGTGCATATTGTGATTCTA+AGG | - | chr7_2:85059260-85059279 | Msa1084640:intron | 30.0% | |
| TTGGTTGCACTATTGAAAAA+CGG | - | chr7_2:85059387-85059406 | Msa1084640:intron | 30.0% | |
| !! | ACCTCTAGAATCAATTCTAA+AGG | + | chr7_2:85059693-85059712 | None:intergenic | 30.0% |
| !! | GTCACTTGCTATTATACTTT+AGG | - | chr7_2:85059865-85059884 | Msa1084640:CDS | 30.0% |
| !!! | AAATATTTTGGTGAGGTTCT+TGG | + | chr7_2:85059896-85059915 | None:intergenic | 30.0% |
| ! | AGTTTTCTTGTTCTAACAGA+AGG | + | chr7_2:85060118-85060137 | None:intergenic | 30.0% |
| CAAGGGATTGTAATCTTAAT+TGG | + | chr7_2:85060141-85060160 | None:intergenic | 30.0% | |
| TTACAATCCCTTGTAAAAAC+AGG | - | chr7_2:85060148-85060167 | Msa1084640:five_prime_UTR | 30.0% | |
| !!! | GATCATACCTGTTTTTACAA+GGG | + | chr7_2:85060158-85060177 | None:intergenic | 30.0% |
| !!! | TGATCATACCTGTTTTTACA+AGG | + | chr7_2:85060159-85060178 | None:intergenic | 30.0% |
| ACTGTACACAATTTAATTGG+AGG | + | chr7_2:85060265-85060284 | None:intergenic | 30.0% | |
| AAATTGTGTACAGTTGAGAA+TGG | - | chr7_2:85060271-85060290 | Msa1084640:intron | 30.0% | |
| AGTTACAACACTACATCAAA+AGG | + | chr7_2:85060599-85060618 | None:intergenic | 30.0% | |
| AAAGCAACATAGCATCTTAT+TGG | + | chr7_2:85060649-85060668 | None:intergenic | 30.0% | |
| AATTGTTTGACATGGTTTCT+AGG | + | chr7_2:85060759-85060778 | None:intergenic | 30.0% | |
| GCAACTAAAATTGTTTGACA+TGG | + | chr7_2:85060767-85060786 | None:intergenic | 30.0% | |
| GAAAGTGAGACAATGAACTA+AGG | + | chr7_2:85057001-85057020 | None:intergenic | 35.0% | |
| TCACTTTCTCTTTCCTTTCT+TGG | - | chr7_2:85057013-85057032 | Msa1084640:three_prime_UTR | 35.0% | |
| TTTGCACCAAGAATGCTTAA+GGG | + | chr7_2:85057071-85057090 | None:intergenic | 35.0% | |
| ! | TTTTGCACCAAGAATGCTTA+AGG | + | chr7_2:85057072-85057091 | None:intergenic | 35.0% |
| ! | CTTTGATTTACTTGAGGTCA+TGG | - | chr7_2:85057611-85057630 | Msa1084640:CDS | 35.0% |
| CATCACTCAATAACTTCTCA+AGG | + | chr7_2:85057794-85057813 | None:intergenic | 35.0% | |
| CTTGTTGAAGAAATTCCTGT+TGG | - | chr7_2:85057843-85057862 | Msa1084640:intron | 35.0% | |
| ATACATCGATGAATACCAAC+AGG | + | chr7_2:85057861-85057880 | None:intergenic | 35.0% | |
| TGAAGAAGTTAAGGATGGAA+AGG | - | chr7_2:85057932-85057951 | Msa1084640:intron | 35.0% | |
| GAAGAAGTTAAGGATGGAAA+GGG | - | chr7_2:85057933-85057952 | Msa1084640:intron | 35.0% | |
| ! | CCAAAGCAAAATTGATAGCA+GGG | + | chr7_2:85058118-85058137 | None:intergenic | 35.0% |
| ! | TCCAAAGCAAAATTGATAGC+AGG | + | chr7_2:85058119-85058138 | None:intergenic | 35.0% |
| !!! | AGAGCTTGCTTTAGTTTTTC+AGG | - | chr7_2:85058172-85058191 | Msa1084640:CDS | 35.0% |
| TTACGGTCCATTTCACAATA+TGG | + | chr7_2:85058301-85058320 | None:intergenic | 35.0% | |
| ATTCACTTGGAACATAGATG+AGG | + | chr7_2:85058605-85058624 | None:intergenic | 35.0% | |
| GGTAGACAAACATGCTTATT+AGG | + | chr7_2:85058649-85058668 | None:intergenic | 35.0% | |
| CTTGATAAATACACCAACAC+AGG | + | chr7_2:85058743-85058762 | None:intergenic | 35.0% | |
| TCCTTTGTGCTATATGGAAT+AGG | - | chr7_2:85058801-85058820 | Msa1084640:CDS | 35.0% | |
| ! | GAGCCTTGTCAACAAAATTT+AGG | + | chr7_2:85058903-85058922 | None:intergenic | 35.0% |
| TGATGTGCAGCCATTAAAAT+TGG | + | chr7_2:85058943-85058962 | None:intergenic | 35.0% | |
| GTTCAAGAAGTTCTTACTCT+TGG | - | chr7_2:85059285-85059304 | Msa1084640:intron | 35.0% | |
| AGAAGTTCTTACTCTTGGAT+TGG | - | chr7_2:85059290-85059309 | Msa1084640:intron | 35.0% | |
| TTTCAATAGTGCAACCAAGA+TGG | + | chr7_2:85059385-85059404 | None:intergenic | 35.0% | |
| TTATCATGAAAAAACGGTGC+AGG | - | chr7_2:85059485-85059504 | Msa1084640:intron | 35.0% | |
| TATCATGAAAAAACGGTGCA+GGG | - | chr7_2:85059486-85059505 | Msa1084640:intron | 35.0% | |
| AAGTTCTATGTCAGTGAACA+TGG | - | chr7_2:85059566-85059585 | Msa1084640:intron | 35.0% | |
| TGATGATTTACACATGAGAC+TGG | - | chr7_2:85059611-85059630 | Msa1084640:CDS | 35.0% | |
| CTGGATTACCTTGAAAATAG+AGG | - | chr7_2:85059630-85059649 | Msa1084640:CDS | 35.0% | |
| ! | GACAAGTACCTCTATTTTCA+AGG | + | chr7_2:85059641-85059660 | None:intergenic | 35.0% |
| !! | GCCTTTAGAATTGATTCTAG+AGG | - | chr7_2:85059689-85059708 | Msa1084640:CDS | 35.0% |
| !! | TTCTCTAGGACAAAAACATC+CGG | + | chr7_2:85060355-85060374 | None:intergenic | 35.0% |
| !! | GATGTTTTTGTCCTAGAGAA+GGG | - | chr7_2:85060355-85060374 | Msa1084640:intron | 35.0% |
| GTTCATGGAACTTAAAGATG+AGG | - | chr7_2:85060411-85060430 | Msa1084640:intron | 35.0% | |
| TGCATTGTCTTCTACATCAT+CGG | - | chr7_2:85060489-85060508 | Msa1084640:intron | 35.0% | |
| AAAGTCTTAACCACAAAGTG+AGG | - | chr7_2:85060524-85060543 | Msa1084640:five_prime_UTR | 35.0% | |
| ! | TTCATTTTCTCCTCACTTTG+TGG | + | chr7_2:85060537-85060556 | None:intergenic | 35.0% |
| GCAACTACTCTTGAACAAAA+TGG | + | chr7_2:85060562-85060581 | None:intergenic | 35.0% | |
| GACTCAGTTACCAACATCAT+TGG | - | chr7_2:85056941-85056960 | Msa1084640:three_prime_UTR | 40.0% | |
| GATTGTTTGGCCAATGATGT+TGG | + | chr7_2:85056954-85056973 | None:intergenic | 40.0% | |
| TCTCTTTCCTTTCTTGGTCA+TGG | - | chr7_2:85057019-85057038 | Msa1084640:three_prime_UTR | 40.0% | |
| AAAGAAGCCATGACCAAGAA+AGG | + | chr7_2:85057029-85057048 | None:intergenic | 40.0% | |
| TTTCTTGGTCATGGCTTCTT+TGG | - | chr7_2:85057028-85057047 | Msa1084640:three_prime_UTR | 40.0% | |
| TCATGGCTTCTTTGGTTGAA+TGG | - | chr7_2:85057036-85057055 | Msa1084640:three_prime_UTR | 40.0% | |
| TAGAACCCCTTAAGCATTCT+TGG | - | chr7_2:85057062-85057081 | Msa1084640:three_prime_UTR | 40.0% | |
| TTGCACCAAGAATGCTTAAG+GGG | + | chr7_2:85057070-85057089 | None:intergenic | 40.0% | |
| !!! | CACAAGCTTGCTATTTTGAG+TGG | - | chr7_2:85057184-85057203 | Msa1084640:three_prime_UTR | 40.0% |
| GGTCATCAAATGGACCAAAA+TGG | - | chr7_2:85057341-85057360 | Msa1084640:CDS | 40.0% | |
| GCTTGAAGTACAAGTGATTG+TGG | - | chr7_2:85057417-85057436 | Msa1084640:CDS | 40.0% | |
| ! | CATTGAGTTGTGTCCTTAGA+GGG | - | chr7_2:85057521-85057540 | Msa1084640:intron | 40.0% |
| ! | ATTGAGTTGTGTCCTTAGAG+GGG | - | chr7_2:85057522-85057541 | Msa1084640:intron | 40.0% |
| ATCAGATTCATACCCCTCTA+AGG | + | chr7_2:85057537-85057556 | None:intergenic | 40.0% | |
| ! | CACATGTTCATTGTTGGTTG+AGG | + | chr7_2:85057724-85057743 | None:intergenic | 40.0% |
| CTCAACCAACAATGAACATG+TGG | - | chr7_2:85057722-85057741 | Msa1084640:CDS | 40.0% | |
| CATTGCCACATGTTCATTGT+TGG | + | chr7_2:85057730-85057749 | None:intergenic | 40.0% | |
| CAACAATGAACATGTGGCAA+TGG | - | chr7_2:85057728-85057747 | Msa1084640:CDS | 40.0% | |
| GTGAGTTTGAATAAGCTCAG+TGG | - | chr7_2:85057765-85057784 | Msa1084640:intron | 40.0% | |
| !! | ATGAAAGATTTGGTGCCTTG+TGG | - | chr7_2:85057972-85057991 | Msa1084640:intron | 40.0% |
| TCATATCCAACACTACCACA+AGG | + | chr7_2:85057990-85058009 | None:intergenic | 40.0% | |
| ! | TCAACACATGTTGTCACTTC+TGG | + | chr7_2:85058068-85058087 | None:intergenic | 40.0% |
| ! | CCCTGCTATCAATTTTGCTT+TGG | - | chr7_2:85058115-85058134 | Msa1084640:CDS | 40.0% |
| GCACAAGAAAATGACGCTTA+AGG | + | chr7_2:85058214-85058233 | None:intergenic | 40.0% | |
| AGAGCAAATCTGACAAGTTC+AGG | - | chr7_2:85058273-85058292 | Msa1084640:CDS | 40.0% | |
| GAGCAAATCTGACAAGTTCA+GGG | - | chr7_2:85058274-85058293 | Msa1084640:CDS | 40.0% | |
| TCAGGGTCCATATTGTGAAA+TGG | - | chr7_2:85058291-85058310 | Msa1084640:CDS | 40.0% | |
| AGAATTCAGCCAAAATGCCT+AGG | + | chr7_2:85058382-85058401 | None:intergenic | 40.0% | |
| CCAACACAGGAAAACAGATT+TGG | + | chr7_2:85058730-85058749 | None:intergenic | 40.0% | |
| ! | CCAAATCTGTTTTCCTGTGT+TGG | - | chr7_2:85058727-85058746 | Msa1084640:CDS | 40.0% |
| GCCTATTCCATATAGCACAA+AGG | + | chr7_2:85058805-85058824 | None:intergenic | 40.0% | |
| TTGTGCTATATGGAATAGGC+CGG | - | chr7_2:85058805-85058824 | Msa1084640:CDS | 40.0% | |
| ATTGCATTCAGAGAGTCGTA+AGG | - | chr7_2:85058989-85059008 | Msa1084640:intron | 40.0% | |
| !! | ATTGCATCTGGTGTTGATTC+CGG | + | chr7_2:85059099-85059118 | None:intergenic | 40.0% |
| CTCTTATCATTCACAGTCAC+AGG | + | chr7_2:85059132-85059151 | None:intergenic | 40.0% | |
| !! | CTGTGAATGATAAGAGTGTC+AGG | - | chr7_2:85059136-85059155 | Msa1084640:intron | 40.0% |
| GAGTGTCAGGAAAATCCTTA+AGG | - | chr7_2:85059149-85059168 | Msa1084640:intron | 40.0% | |
| CAGGAAAATCCTTAAGGCAT+TGG | - | chr7_2:85059155-85059174 | Msa1084640:intron | 40.0% | |
| ACAAGCATAGTGTAGTGCAT+AGG | + | chr7_2:85059244-85059263 | None:intergenic | 40.0% | |
| ATTCTCCTTAAGAATCCTCG+TGG | - | chr7_2:85059318-85059337 | Msa1084640:intron | 40.0% | |
| TGTATCCACGAGGATTCTTA+AGG | + | chr7_2:85059326-85059345 | None:intergenic | 40.0% | |
| TAAGAATCCTCGTGGATACA+CGG | - | chr7_2:85059326-85059345 | Msa1084640:intron | 40.0% | |
| AATAGTGCAACCAAGATGGA+TGG | + | chr7_2:85059381-85059400 | None:intergenic | 40.0% | |
| CAATTTGTCAGAGATTGACG+AGG | - | chr7_2:85059454-85059473 | Msa1084640:intron | 40.0% | |
| ATCATGAAAAAACGGTGCAG+GGG | - | chr7_2:85059487-85059506 | Msa1084640:intron | 40.0% | |
| ATGTTGCAGTTGCATTTGCT+AGG | - | chr7_2:85059972-85059991 | Msa1084640:CDS | 40.0% | |
| ! | TGCAAGTTCAACAGCTTTGA+AGG | - | chr7_2:85060060-85060079 | Msa1084640:CDS | 40.0% |
| !! | GCAAGTTCAACAGCTTTGAA+GGG | - | chr7_2:85060061-85060080 | Msa1084640:CDS | 40.0% |
| TGTGTACAGTTGAGAATGGT+AGG | - | chr7_2:85060275-85060294 | Msa1084640:intron | 40.0% | |
| GTATCTAGACGATGATATGC+CGG | - | chr7_2:85060333-85060352 | Msa1084640:intron | 40.0% | |
| !! | GGATGTTTTTGTCCTAGAGA+AGG | - | chr7_2:85060354-85060373 | Msa1084640:intron | 40.0% |
| ! | TTTTGTCCTAGAGAAGGGAA+CGG | - | chr7_2:85060360-85060379 | Msa1084640:intron | 40.0% |
| ACTTAAAGATGAGGTGCAGA+AGG | - | chr7_2:85060420-85060439 | Msa1084640:intron | 40.0% | |
| !! | GAAGGCATTTCACAAGGATA+TGG | - | chr7_2:85060438-85060457 | Msa1084640:intron | 40.0% |
| ATGGCTGAAAATAACCAAGC+AGG | - | chr7_2:85060457-85060476 | Msa1084640:intron | 40.0% | |
| ATGCAGATGAAAAACCTGCT+TGG | + | chr7_2:85060474-85060493 | None:intergenic | 40.0% | |
| ! | GCATTGAGTTGTGTCCTTAG+AGG | - | chr7_2:85057520-85057539 | Msa1084640:intron | 45.0% |
| ! | ACACATGTTGTCACTTCTGG+TGG | + | chr7_2:85058065-85058084 | None:intergenic | 45.0% |
| ! | AGTCGGATACCTAGGCATTT+TGG | - | chr7_2:85058370-85058389 | Msa1084640:CDS | 45.0% |
| GAATGCAATGAGAGAGAAGC+TGG | + | chr7_2:85058978-85058997 | None:intergenic | 45.0% | |
| GGAATCAACACCAGATGCAA+TGG | - | chr7_2:85059098-85059117 | Msa1084640:intron | 45.0% | |
| AACACCAGATGCAATGGAAG+TGG | - | chr7_2:85059104-85059123 | Msa1084640:intron | 45.0% | |
| ACGAAAGGATCCATCCATCT+TGG | - | chr7_2:85059368-85059387 | Msa1084640:intron | 45.0% | |
| GCATCAGAAACCACTCTTGA+TGG | - | chr7_2:85059417-85059436 | Msa1084640:intron | 45.0% | |
| AGCAGTTTGTCCATCAAGAG+TGG | + | chr7_2:85059430-85059449 | None:intergenic | 45.0% | |
| ! | CTTTTTCCCGCATTGTTCTG+AGG | - | chr7_2:85060300-85060319 | Msa1084640:intron | 45.0% |
| TCAAGCACCTCAGAACAATG+CGG | + | chr7_2:85060310-85060329 | None:intergenic | 45.0% | |
| AGCAGAGAACGAAGAAAGCA+CGG | - | chr7_2:85060389-85060408 | Msa1084640:intron | 45.0% | |
| ! | AACGAAGAAAGCACGGTTCA+TGG | - | chr7_2:85060396-85060415 | Msa1084640:intron | 45.0% |
| TACATCATCGGCAAGTCGTA+GGG | - | chr7_2:85060501-85060520 | Msa1084640:intron | 45.0% | |
| AGGATGGAAAGGGAAAGCCA+AGG | - | chr7_2:85057943-85057962 | Msa1084640:intron | 50.0% | |
| ! | TTGGTGCCTTGTGGTAGTGT+TGG | - | chr7_2:85057981-85058000 | Msa1084640:intron | 50.0% |
| ! | CATGTTGTCACTTCTGGTGG+TGG | + | chr7_2:85058062-85058081 | None:intergenic | 50.0% |
| ATGCATGAGATGGTGACTGC+AGG | - | chr7_2:85058700-85058719 | Msa1084640:CDS | 50.0% | |
| GAGAGTCGTAAGGTCTGACA+TGG | - | chr7_2:85058999-85059018 | Msa1084640:intron | 50.0% | |
| ATTCCGGCAGAGATTGGACT+CGG | + | chr7_2:85059083-85059102 | None:intergenic | 50.0% | |
| !! | GTGTTGATTCCGGCAGAGAT+TGG | + | chr7_2:85059089-85059108 | None:intergenic | 50.0% |
| GGTTCCACTTCCATTGCATC+TGG | + | chr7_2:85059111-85059130 | None:intergenic | 50.0% | |
| CGTCAGAGTCCAATGCCTTA+AGG | + | chr7_2:85059167-85059186 | None:intergenic | 50.0% | |
| TGAAGAACCGTGTATCCACG+AGG | + | chr7_2:85059336-85059355 | None:intergenic | 50.0% | |
| GGATGGATCCTTTCGTCTTG+CGG | + | chr7_2:85059364-85059383 | None:intergenic | 50.0% | |
| TCAGAGATTGACGAGGCGAA+AGG | - | chr7_2:85059461-85059480 | Msa1084640:intron | 50.0% | |
| TGAAAAAACGGTGCAGGGGA+AGG | - | chr7_2:85059491-85059510 | Msa1084640:intron | 50.0% | |
| GGAAGGAGTCTCACAAGGAT+AGG | - | chr7_2:85059508-85059527 | Msa1084640:intron | 50.0% | |
| TAGGCTGTTCTTTCCTGCTG+AGG | - | chr7_2:85059991-85060010 | Msa1084640:CDS | 50.0% | |
| TGTTCTTTCCTGCTGAGGCA+AGG | - | chr7_2:85059996-85060015 | Msa1084640:CDS | 50.0% | |
| GTTCTTTCCTGCTGAGGCAA+GGG | - | chr7_2:85059997-85060016 | Msa1084640:CDS | 50.0% | |
| AGGGTAGCCATAGAGAATGC+TGG | - | chr7_2:85060016-85060035 | Msa1084640:CDS | 50.0% | |
| GGGTAGCCATAGAGAATGCT+GGG | - | chr7_2:85060017-85060036 | Msa1084640:CDS | 50.0% | |
| GGTAGCCATAGAGAATGCTG+GGG | - | chr7_2:85060018-85060037 | Msa1084640:CDS | 50.0% | |
| ATCTGCCCCAGCATTCTCTA+TGG | + | chr7_2:85060026-85060045 | None:intergenic | 50.0% | |
| GCTGTTGAACTTGCATAGCG+TGG | + | chr7_2:85060055-85060074 | None:intergenic | 50.0% | |
| CAAGCACCTCAGAACAATGC+GGG | + | chr7_2:85060309-85060328 | None:intergenic | 50.0% | |
| CTTCTTCCGTTCCCTTCTCT+AGG | + | chr7_2:85060369-85060388 | None:intergenic | 50.0% | |
| !! | GGTGCAGAAGGCATTTCACA+AGG | - | chr7_2:85060432-85060451 | Msa1084640:intron | 50.0% |
| CTACATCATCGGCAAGTCGT+AGG | - | chr7_2:85060500-85060519 | Msa1084640:intron | 50.0% | |
| CTAGGTATCCGACTGCAGAG+CGG | + | chr7_2:85058364-85058383 | None:intergenic | 55.0% | |
| GACGGCGTGAATGCATGAGA+TGG | - | chr7_2:85058690-85058709 | Msa1084640:CDS | 55.0% | |
| TCACGTTGCCGCAAGACGAA+AGG | - | chr7_2:85059353-85059372 | Msa1084640:intron | 55.0% | |
| TACTGCAGCCGCTCTGCAGT+CGG | - | chr7_2:85058353-85058372 | Msa1084640:CDS | 60.0% | |
| CGCTCTGCAGTCGGATACCT+AGG | - | chr7_2:85058362-85058381 | Msa1084640:CDS | 60.0% | |
| CGGCAGAGATTGGACTCGGA+GGG | + | chr7_2:85059079-85059098 | None:intergenic | 60.0% | |
| CCTCCGAGTCCAATCTCTGC+CGG | - | chr7_2:85059077-85059096 | Msa1084640:intron | 60.0% | |
| GCAGGGGAAGGAGTCTCACA+AGG | - | chr7_2:85059503-85059522 | Msa1084640:intron | 60.0% | |
| ATGGCTACCCTTGCCTCAGC+AGG | + | chr7_2:85060007-85060026 | None:intergenic | 60.0% | |
| CCGGCAGAGATTGGACTCGG+AGG | + | chr7_2:85059080-85059099 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 85056937 | 85060824 | 85056937 | ID=Msa1084640;Name=Msa1084640 |
| chr7_2 | mRNA | 85056937 | 85060824 | 85056937 | ID=Msa1084640-mRNA-1;Parent=Msa1084640;Name=Msa1084640-mRNA-1;_AED=0.09;_eAED=0.09;_QI=357|1|1|1|0.75|0.6|5|269|594 |
| chr7_2 | exon | 85056937 | 85057477 | 85056937 | ID=Msa1084640-mRNA-1:exon:22904;Parent=Msa1084640-mRNA-1 |
| chr7_2 | exon | 85057592 | 85057780 | 85057592 | ID=Msa1084640-mRNA-1:exon:22903;Parent=Msa1084640-mRNA-1 |
| chr7_2 | exon | 85058110 | 85058869 | 85058110 | ID=Msa1084640-mRNA-1:exon:22902;Parent=Msa1084640-mRNA-1 |
| chr7_2 | exon | 85059568 | 85060184 | 85059568 | ID=Msa1084640-mRNA-1:exon:22901;Parent=Msa1084640-mRNA-1 |
| chr7_2 | exon | 85060521 | 85060824 | 85060521 | ID=Msa1084640-mRNA-1:exon:22900;Parent=Msa1084640-mRNA-1 |
| chr7_2 | five_prime_UTR | 85060521 | 85060824 | 85060521 | ID=Msa1084640-mRNA-1:five_prime_utr;Parent=Msa1084640-mRNA-1 |
| chr7_2 | five_prime_UTR | 85060132 | 85060184 | 85060132 | ID=Msa1084640-mRNA-1:five_prime_utr;Parent=Msa1084640-mRNA-1 |
| chr7_2 | CDS | 85059568 | 85060131 | 85059568 | ID=Msa1084640-mRNA-1:cds;Parent=Msa1084640-mRNA-1 |
| chr7_2 | CDS | 85058110 | 85058869 | 85058110 | ID=Msa1084640-mRNA-1:cds;Parent=Msa1084640-mRNA-1 |
| chr7_2 | CDS | 85057592 | 85057780 | 85057592 | ID=Msa1084640-mRNA-1:cds;Parent=Msa1084640-mRNA-1 |
| chr7_2 | CDS | 85057206 | 85057477 | 85057206 | ID=Msa1084640-mRNA-1:cds;Parent=Msa1084640-mRNA-1 |
| chr7_2 | three_prime_UTR | 85056937 | 85057205 | 85056937 | ID=Msa1084640-mRNA-1:three_prime_utr;Parent=Msa1084640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
