AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1236100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1236100 MtrunA17_Chr1g0213391 91.957 833 45 6 1 827 1 817 0.0 1489
Msa1236100 MtrunA17_Chr1g0181831 55.874 732 241 20 104 809 174 849 0.0 701
Msa1236100 MtrunA17_Chr1g0181831 58.182 55 20 1 18 69 11 65 5.18e-13 73.2
Msa1236100 MtrunA17_Chr5g0448071 30.063 316 184 9 245 553 106 391 2.56e-37 144
Msa1236100 MtrunA17_Chr6g0456341 31.818 242 120 9 249 479 84 291 1.21e-22 100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1236100 AT3G55020.1 62.156 835 262 15 10 822 15 817 0.0 938
Msa1236100 AT3G55020.3 64.868 760 229 13 10 754 15 751 0.0 904
Msa1236100 AT2G39280.1 61.214 758 255 14 20 761 10 744 0.0 837
Msa1236100 AT3G55020.2 63.561 719 222 14 10 712 15 709 0.0 831
Msa1236100 AT2G39280.2 60.662 755 253 15 23 761 41 767 0.0 815
Msa1236100 AT2G37290.1 55.572 691 233 16 124 798 209 841 0.0 687
Msa1236100 AT2G37290.1 49.367 79 38 2 23 101 16 92 2.44e-14 77.8
Msa1236100 AT2G37290.3 55.716 691 232 16 124 798 209 841 0.0 687
Msa1236100 AT2G37290.3 46.512 86 44 2 16 101 9 92 2.65e-14 77.8
Msa1236100 AT2G37290.2 53.611 720 236 16 124 798 209 875 0.0 679
Msa1236100 AT2G37290.2 49.367 79 38 2 23 101 16 92 2.32e-14 77.8
Msa1236100 AT3G07890.1 31.686 344 179 12 221 555 100 396 2.49e-40 154
Msa1236100 AT3G07890.4 31.686 344 179 12 221 555 100 396 2.49e-40 154
Msa1236100 AT3G07890.5 31.686 344 179 12 221 555 100 396 2.49e-40 154
Msa1236100 AT3G07890.2 31.686 344 179 12 221 555 100 396 2.49e-40 154
Msa1236100 AT3G07890.3 31.686 344 179 12 221 555 100 396 2.49e-40 154
Msa1236100 AT5G15930.1 32.083 240 122 8 249 479 82 289 2.11e-23 103
Msa1236100 AT3G02460.1 30.417 240 126 8 249 479 85 292 1.55e-20 94.7
Msa1236100 AT3G02460.4 30.417 240 126 8 249 479 85 292 2.10e-20 93.2
Msa1236100 AT3G02460.3 30.453 243 122 9 249 479 85 292 5.21e-20 92.8
Msa1236100 AT3G02460.2 30.702 228 112 8 249 464 85 278 5.51e-18 86.7
Msa1236100 AT3G02460.5 30.667 225 116 7 249 464 85 278 8.34e-18 85.1

Find 243 sgRNAs with CRISPR-Local

Find 632 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCGAACTTCATTTATATTT+TGG 0.118339 8_2:+14570681 None:intergenic
ATCGGTATACAAACCCAATT+TGG 0.132514 8_2:+14571305 None:intergenic
TAGAACTGCAGTTGCTTTAA+TGG 0.133261 8_2:-14570923 Msa1236100:CDS
CTTAGTCAAAATAATAAAAT+TGG 0.144363 8_2:+14564664 None:intergenic
TTTCCCTCATGTTGACTTAC+AGG 0.231638 8_2:+14565865 None:intergenic
AGCCAATCATCTAGATTATC+TGG 0.233143 8_2:-14571189 Msa1236100:CDS
CTGGCCTCCAATGGTGATTC+TGG 0.238333 8_2:-14572245 Msa1236100:CDS
TTAAACTTAGCTCAATTGTT+AGG 0.251313 8_2:+14564793 None:intergenic
AATCAAAGTACAACAAGAAT+TGG 0.265388 8_2:+14564722 None:intergenic
ACTTATGCTTAAATGCCTTT+TGG 0.272181 8_2:+14564964 None:intergenic
GCGGGAGAGGTTTCCCAAAT+TGG 0.277262 8_2:-14571319 Msa1236100:CDS
TTTCTAGATCCGGGAGATTC+TGG 0.277675 8_2:+14566116 None:intergenic
ATCTTATGGTTGACCATAAC+TGG 0.286814 8_2:+14572787 None:intergenic
GGGGAAGAGAACAAAGTTTC+TGG 0.290787 8_2:-14572951 Msa1236100:CDS
GGAGCTTGAAACAGCATTAA+TGG 0.291836 8_2:-14568276 Msa1236100:CDS
ATTCGTGTTAATAAGAAAAC+TGG 0.298462 8_2:-14572732 Msa1236100:CDS
GATCTGCCGCGGACATTTCC+TGG 0.303734 8_2:-14572008 Msa1236100:CDS
CTAGATACTCCTCTTGTTGA+TGG 0.308816 8_2:-14572549 Msa1236100:CDS
CTCTTGATTGTTTCTAGATC+CGG 0.309833 8_2:+14566106 None:intergenic
TTCTTGCTCCTCAAACCGTC+TGG 0.314143 8_2:+14565780 None:intergenic
AATTTATCCCGTACAGAATC+TGG 0.323143 8_2:-14570518 Msa1236100:CDS
GTTTAATATGACAAAATAAA+TGG 0.324098 8_2:-14565409 Msa1236100:three_prime_UTR
ATATGCTTCCCAAGTGCTTC+AGG 0.328257 8_2:-14567232 Msa1236100:intron
GGTGGTTGGGGTTTGAACTC+TGG 0.328751 8_2:-14564840 Msa1236100:three_prime_UTR
ACAGGAAACTGCAATGCTTC+AGG 0.337217 8_2:-14567417 Msa1236100:intron
CTTTCTCGACCATTTGGACT+TGG 0.337275 8_2:-14566047 Msa1236100:CDS
CGGGAGAGGTTTCCCAAATT+GGG 0.339474 8_2:-14571318 Msa1236100:CDS
AATGAGATTCCTAAATATAA+TGG 0.343970 8_2:-14565515 Msa1236100:three_prime_UTR
TTTCAGCTACTATGAATATA+AGG 0.348559 8_2:+14565132 None:intergenic
CTCGACCATTTGGACTTGGA+TGG 0.351641 8_2:-14566043 Msa1236100:CDS
TGAGTTAAAGAAATGTATAA+TGG 0.354742 8_2:-14565349 Msa1236100:three_prime_UTR
GCTGGTTCTTCCACATTAGT+AGG 0.355189 8_2:+14565901 None:intergenic
TCCTTTGTTGTTACCAAGGC+TGG 0.355345 8_2:+14570791 None:intergenic
GTTCTTTATTACTATGTCAT+AGG 0.356134 8_2:-14565690 Msa1236100:three_prime_UTR
GTGCAGGTTGCATGGGTGAC+TGG 0.357360 8_2:-14571164 Msa1236100:CDS
ATTTCCTGGTCACCCTGCTT+TGG 0.358219 8_2:-14571994 Msa1236100:CDS
TCGAATAATGCGCAAGTGCT+TGG 0.359101 8_2:-14570542 Msa1236100:CDS
GCTGATACTCCACCTGAAAA+TGG 0.359223 8_2:-14572861 Msa1236100:CDS
AGTATTAAGAGATGATCTTA+TGG 0.361165 8_2:+14572773 None:intergenic
TGTTATACAATTATCTAAAC+AGG 0.361819 8_2:-14565197 Msa1236100:three_prime_UTR
TATAAATGAAGTTCGATTGC+AGG 0.367487 8_2:-14570675 Msa1236100:CDS
TTGTGATCGAATGTAATTAC+AGG 0.371474 8_2:+14573697 None:intergenic
CACTAGAGGCTTCGTGTCCT+TGG 0.372322 8_2:-14572485 Msa1236100:CDS
GTTGCTTTAATGGAGCTATA+TGG 0.372455 8_2:-14570913 Msa1236100:intron
AACTGTTGCACTTGCAGAAA+TGG 0.384197 8_2:-14566565 Msa1236100:CDS
GCCCTTCCCCAGACGGTTTG+AGG 0.386727 8_2:-14565788 Msa1236100:three_prime_UTR
AGTTTGCTTTCTCGACCATT+TGG 0.398525 8_2:-14566053 Msa1236100:CDS
TGAGCTAAGTTTAAACTGTT+GGG 0.399741 8_2:-14564784 Msa1236100:three_prime_UTR
AGCTCAGAGAAGGGTGTTGA+TGG 0.400403 8_2:-14572897 Msa1236100:CDS
CGAATAATGCGCAAGTGCTT+GGG 0.402971 8_2:-14570541 Msa1236100:CDS
TAGTATTATGATCTGTATAA+AGG 0.408103 8_2:+14565588 None:intergenic
GAGATGGTTGCAGTTTAGTT+TGG 0.408611 8_2:+14566484 None:intergenic
CAAAAGGGCTTAAAGCTTTG+AGG 0.410424 8_2:-14570601 Msa1236100:CDS
CGTACTCACGGTATCTTTGC+AGG 0.412476 8_2:+14573282 None:intergenic
ATCAAAGTACAACAAGAATT+GGG 0.416799 8_2:+14564723 None:intergenic
ACCTCTCCCCTCAGTGCCAT+TGG 0.417402 8_2:+14572426 None:intergenic
TTAACCTGCTCTGGAAGATC+TGG 0.418284 8_2:+14570434 None:intergenic
TTGAGCTAAGTTTAAACTGT+TGG 0.421436 8_2:-14564785 Msa1236100:three_prime_UTR
TAGTCAAAAGGAGGAGTTAC+CGG 0.426816 8_2:-14572838 Msa1236100:CDS
AATGGAGAAGAGAGCAGTTA+TGG 0.428862 8_2:-14566547 Msa1236100:CDS
GCAATTGAAGAAAGATCAAA+AGG 0.430398 8_2:-14570617 Msa1236100:CDS
TAAACTTAGCTCAATTGTTA+GGG 0.434615 8_2:+14564794 None:intergenic
TTGAAGAGTTGGTGCGGGAG+AGG 0.436427 8_2:-14571332 Msa1236100:CDS
ATTAAAAGTAATCATCAAAA+CGG 0.438574 8_2:-14572221 Msa1236100:CDS
TCGACCATTTGGACTTGGAT+GGG 0.439304 8_2:-14566042 Msa1236100:CDS
AAGACGGAATTAACCTGCTC+TGG 0.441432 8_2:+14570425 None:intergenic
GAGTTAAAGAAATGTATAAT+GGG 0.441887 8_2:-14565348 Msa1236100:three_prime_UTR
TTAGTCAAAATAATAAAATT+GGG 0.443590 8_2:+14564665 None:intergenic
GCTTCCTTGGGAAAGTGGTC+AGG 0.448269 8_2:-14571111 Msa1236100:intron
CGACCATTTGGACTTGGATG+GGG 0.448956 8_2:-14566041 Msa1236100:CDS
TCGGTATACAAACCCAATTT+GGG 0.454846 8_2:+14571306 None:intergenic
GCGGGTAGAGAAGTATTATC+AGG 0.455990 8_2:-14572273 Msa1236100:CDS
ACTTTCTGATAAACAAGAAC+AGG 0.458805 8_2:-14567435 Msa1236100:CDS
TGCTGCTGCTGCACCACTAG+AGG 0.462754 8_2:-14572499 Msa1236100:CDS
ATGCTAAGAGCAACTCCAAC+GGG 0.463639 8_2:-14564923 Msa1236100:three_prime_UTR
ATCTGGGAGTGCAGGTTGCA+TGG 0.464025 8_2:-14571172 Msa1236100:CDS
AGTTGAAGTTTCTAGATATG+TGG 0.464131 8_2:-14564887 Msa1236100:three_prime_UTR
TGGGACTGTGTGAGCGAGAA+TGG 0.465330 8_2:+14573895 None:intergenic
AGAGGATATGATAGAGTCTC+AGG 0.467308 8_2:-14571474 Msa1236100:intron
GAGTTGGAAGTTCTTGTTCG+TGG 0.469569 8_2:-14572456 Msa1236100:CDS
TCAATTGCAGCTATTACAGC+TGG 0.470313 8_2:+14570632 None:intergenic
CTACCATCCTCGTCCAAAGC+AGG 0.473442 8_2:+14571981 None:intergenic
TCCCTCTGTTGGTTACTGTC+AGG 0.474299 8_2:-14571916 Msa1236100:intron
GAAGTATTATCAGGATCTAC+TGG 0.474674 8_2:-14572264 Msa1236100:CDS
AGCTCCAGATCTTCCAGAGC+AGG 0.477837 8_2:-14570438 Msa1236100:intron
TCCCAGATAATCTAGATGAT+TGG 0.479830 8_2:+14571187 None:intergenic
AAAAGGGCTTAAAGCTTTGA+GGG 0.481358 8_2:-14570600 Msa1236100:CDS
TTAAAAGTAATCATCAAAAC+GGG 0.485896 8_2:-14572220 Msa1236100:CDS
TCTTGATTGTTTCTAGATCC+GGG 0.486136 8_2:+14566107 None:intergenic
TGCCTGAGGAAAATGCCTTT+TGG 0.488127 8_2:-14571748 Msa1236100:intron
GTAAGTCAACATGAGGGAAA+TGG 0.490157 8_2:-14565862 Msa1236100:CDS
TGGTCACCCTGCTTTGGACG+AGG 0.490278 8_2:-14571988 Msa1236100:CDS
CTCCTCAAACCGTCTGGGGA+AGG 0.490703 8_2:+14565786 None:intergenic
TACTTCAGTGCTTCGAGTGT+GGG 0.492239 8_2:-14570983 Msa1236100:intron
TTCCCTCATGTTGACTTACA+GGG 0.493592 8_2:+14565866 None:intergenic
ACCTGAAAATGGTAGTCAAA+AGG 0.493903 8_2:-14572850 Msa1236100:CDS
AATTCCAGAATCACCATTGG+AGG 0.496500 8_2:+14572241 None:intergenic
AGTTGGAAGTTCTTGTTCGT+GGG 0.497626 8_2:-14572455 Msa1236100:CDS
ACAGGGCTTTCTACTACAGC+TGG 0.498797 8_2:+14565883 None:intergenic
CGAGACAGAGTCTTCTGTAT+TGG 0.501438 8_2:-14572994 Msa1236100:CDS
TTTGAGGGATGCTAAGGGTC+TGG 0.503136 8_2:-14570585 Msa1236100:CDS
CCCTTCTCTGAGCTAGCATC+AGG 0.503203 8_2:+14572906 None:intergenic
AGAAAAGATCAGCTATTCTC+AGG 0.504550 8_2:-14569093 Msa1236100:intron
CGGTATCTTTGCAGGTGTTG+AGG 0.504674 8_2:+14573290 None:intergenic
AGCATCCTTTGTTGTTACCA+AGG 0.504710 8_2:+14570787 None:intergenic
GGGAGTTCCAATGGCACTGA+GGG 0.506042 8_2:-14572433 Msa1236100:CDS
GGCTTGAGTACCTCAACAAA+TGG 0.507338 8_2:-14572528 Msa1236100:CDS
GCGGGTAGAGCAAGAACAAA+AGG 0.510673 8_2:-14567304 Msa1236100:CDS
TAAAGCTTTGAGGGATGCTA+AGG 0.510952 8_2:-14570591 Msa1236100:CDS
TTTAATTCCAGAATCACCAT+TGG 0.511424 8_2:+14572238 None:intergenic
CAAATTAGTGTGAGGACTCG+AGG 0.512153 8_2:-14565031 Msa1236100:three_prime_UTR
TCTTGCTCCTCAAACCGTCT+GGG 0.512390 8_2:+14565781 None:intergenic
GATGGTGCAAAATCATCAAA+AGG 0.513893 8_2:-14572630 Msa1236100:CDS
ACTTTACTTCAGTCATTAGC+CGG 0.514238 8_2:-14570752 Msa1236100:CDS
AGATGGTTAAGCAGGACAAC+AGG 0.514494 8_2:-14568253 Msa1236100:CDS
CTCACTTTATGCAGATTGCA+TGG 0.515543 8_2:-14569147 Msa1236100:intron
AAAAGGTAACCTGAAGCACT+TGG 0.516055 8_2:+14567223 None:intergenic
CGTTAAAGTACAAGATGAGT+TGG 0.517468 8_2:-14565839 Msa1236100:CDS
TCCTCAAACCGTCTGGGGAA+GGG 0.518435 8_2:+14565787 None:intergenic
ACTTCCAACTCTTCTTTCCA+AGG 0.520731 8_2:+14572468 None:intergenic
ATCATCTCTTAATACTATTG+AGG 0.521914 8_2:-14572766 Msa1236100:CDS
TCGTCCAAAGCAGGGTGACC+AGG 0.522777 8_2:+14571990 None:intergenic
ATTAATGGAGATGGTTAAGC+AGG 0.523073 8_2:-14568261 Msa1236100:CDS
GCAAACTTATCCTCCTGGTA+GGG 0.524898 8_2:+14566069 None:intergenic
GAATTCATAGAGTCCAGTTA+TGG 0.526092 8_2:-14572800 Msa1236100:CDS
ATGTCATAGGATAATAGTAT+TGG 0.527576 8_2:-14565677 Msa1236100:three_prime_UTR
TTGATTAGTCTTACTGGAGA+GGG 0.527695 8_2:-14570473 Msa1236100:CDS
ATCATCTAAAATGCCCATCA+AGG 0.531529 8_2:+14571517 None:intergenic
GCTACTTTGCAGTATCAGTC+TGG 0.532281 8_2:-14566507 Msa1236100:CDS
TTGTAGAACCAGATTCTGTA+CGG 0.533433 8_2:+14570510 None:intergenic
GTACTTCAGTGCTTCGAGTG+TGG 0.533468 8_2:-14570984 Msa1236100:intron
ATTCTAGTCTCCTCGGATGC+CGG 0.534883 8_2:+14572819 None:intergenic
GGGCAGTTAGATGACAATGA+TGG 0.535831 8_2:-14572200 Msa1236100:CDS
ACTGCTATCAAATGTGGAGC+CGG 0.536559 8_2:+14570733 None:intergenic
TGAAACAGCATTAATGGAGA+TGG 0.538013 8_2:-14568270 Msa1236100:CDS
TCACCCCATCCAAGTCCAAA+TGG 0.538801 8_2:+14566038 None:intergenic
CTTAAAACATACCGTGGAGA+TGG 0.540060 8_2:+14566468 None:intergenic
TTGGTAACAACAAAGGATGC+TGG 0.541111 8_2:-14570785 Msa1236100:CDS
TAAAGAAATGTATAATGGGA+TGG 0.543872 8_2:-14565344 Msa1236100:three_prime_UTR
TCTAGATTATCTGGGAGTGC+AGG 0.544285 8_2:-14571180 Msa1236100:CDS
AGAAAGCAAACTTATCCTCC+TGG 0.545441 8_2:+14566064 None:intergenic
TCACTTTGCCCTTCCCCAGA+CGG 0.545776 8_2:-14565795 Msa1236100:three_prime_UTR
ACCTGATGCTAGCTCAGAGA+AGG 0.548837 8_2:-14572907 Msa1236100:CDS
GTGTCCTTGGAAAGAAGAGT+TGG 0.552169 8_2:-14572472 Msa1236100:CDS
TGTGTCAACAGGGATGCCTA+TGG 0.558632 8_2:-14573326 Msa1236100:intron
CTGGTAGGGGTATCCATCGT+AGG 0.559442 8_2:+14566083 None:intergenic
ACAAGAGGAGTATCTAGACT+AGG 0.560908 8_2:+14572555 None:intergenic
AGTTATGGCTGAGTCTATGC+TGG 0.562409 8_2:-14566532 Msa1236100:CDS
AGGTGTGGTAAAAGATGAGC+TGG 0.563044 8_2:-14572682 Msa1236100:CDS
TCTTCACAGCCAGAATCTCC+CGG 0.563964 8_2:-14566125 Msa1236100:CDS
GGCAGTTAGATGACAATGAT+GGG 0.564494 8_2:-14572199 Msa1236100:CDS
AAAGATGAAAGAAATAAGAA+AGG 0.564961 8_2:-14572702 Msa1236100:CDS
CAGTTCTAAATAGCATGACT+CGG 0.565813 8_2:+14570938 None:intergenic
CACCCTGCTTTGGACGAGGA+TGG 0.566489 8_2:-14571984 Msa1236100:CDS
TGTGGGTGTCAAAGCAAGGC+GGG 0.567027 8_2:-14572291 Msa1236100:CDS
AACATGCTTCCTTGGGAAAG+TGG 0.568071 8_2:-14571116 Msa1236100:CDS
CTTGCTCCTCAAACCGTCTG+GGG 0.570168 8_2:+14565782 None:intergenic
AAGAGGAAAGGTCCGAGCGG+TGG 0.571481 8_2:-14573040 Msa1236100:CDS
TCTATGAATTCTAGTCTCCT+CGG 0.571616 8_2:+14572812 None:intergenic
TCCAATGGCACTGAGGGGAG+AGG 0.572143 8_2:-14572427 Msa1236100:intron
ATCATCAAAAGGAGCATGTG+AGG 0.573179 8_2:-14572619 Msa1236100:CDS
TGTAGAACCAGATTCTGTAC+GGG 0.579242 8_2:+14570511 None:intergenic
GCCAATCATCTAGATTATCT+GGG 0.580459 8_2:-14571188 Msa1236100:CDS
CAGGATCTACTGGCCTCCAA+TGG 0.580957 8_2:-14572254 Msa1236100:CDS
GCTCGACATAATCCCTCTGT+TGG 0.584398 8_2:-14571927 Msa1236100:CDS
TTTGATTAGTCTTACTGGAG+AGG 0.585523 8_2:-14570474 Msa1236100:CDS
CAAACTTATCCTCCTGGTAG+GGG 0.586096 8_2:+14566070 None:intergenic
GCACACTCATCAAGCGGTGT+GGG 0.586604 8_2:+14573876 None:intergenic
GGAGGAGTTACCGGCATCCG+AGG 0.588034 8_2:-14572829 Msa1236100:CDS
TGGATGGGGTGATCGAAACA+AGG 0.588081 8_2:-14566027 Msa1236100:intron
CTACGATGGATACCCCTACC+AGG 0.588101 8_2:-14566082 Msa1236100:CDS
TTCAGGAGGAAGAAGAGGAA+AGG 0.588650 8_2:-14573052 Msa1236100:intron
TACCATCCTCGTCCAAAGCA+GGG 0.589974 8_2:+14571982 None:intergenic
TATTATATATAAAAGTGAGA+AGG 0.590859 8_2:-14565546 Msa1236100:three_prime_UTR
TCTGGGAGTGCAGGTTGCAT+GGG 0.591256 8_2:-14571171 Msa1236100:CDS
GCTCAGAGAAGGGTGTTGAT+GGG 0.591623 8_2:-14572896 Msa1236100:CDS
AGCAGCAATACCATTTGTTG+AGG 0.591699 8_2:+14572518 None:intergenic
CAAGAGGAGTATCTAGACTA+GGG 0.592003 8_2:+14572556 None:intergenic
AAAAGGTTACAGAGGATGCT+CGG 0.593286 8_2:-14567287 Msa1236100:CDS
CAATACAGAAGACTCTGTCT+CGG 0.596388 8_2:+14572995 None:intergenic
GACACAAACAGAACACCTGT+GGG 0.596559 8_2:-14572972 Msa1236100:CDS
GTTTCTGGTGCTGAATCTGT+AGG 0.597964 8_2:-14572936 Msa1236100:CDS
ATGTCTTGTAGGTCCAGCCT+TGG 0.598613 8_2:-14570804 Msa1236100:intron
ATAGGGGAAACCTACTAATG+TGG 0.602696 8_2:-14565911 Msa1236100:intron
GGTTAAGCAGGACAACAGGC+GGG 0.603079 8_2:-14568249 Msa1236100:CDS
ATTTCTGATAGGTCTTGATG+CGG 0.605171 8_2:-14567323 Msa1236100:intron
GCAAGAACAAAAGGTTACAG+AGG 0.606679 8_2:-14567295 Msa1236100:CDS
TGCACACTCATCAAGCGGTG+TGG 0.606794 8_2:+14573875 None:intergenic
CACAAACAGAACACCTGTGG+GGG 0.609799 8_2:-14572970 Msa1236100:CDS
TAATGGAAAAGTAAATTGAG+TGG 0.610830 8_2:-14565498 Msa1236100:three_prime_UTR
GGTAGAGCGACTAGAAGAAG+AGG 0.611682 8_2:-14567477 Msa1236100:CDS
CATGCTAAGAGCAACTCCAA+CGG 0.613629 8_2:-14564924 Msa1236100:three_prime_UTR
AAGCTGACTGCTATCAAATG+TGG 0.615286 8_2:+14570727 None:intergenic
CTTCAAGCTAACAGACCCGT+TGG 0.616500 8_2:+14564908 None:intergenic
TGTAAATGCTAGCGTACTCA+CGG 0.616978 8_2:+14573270 None:intergenic
AAAGGTAACCTGAAGCACTT+GGG 0.617219 8_2:+14567224 None:intergenic
TGGTTAAGCAGGACAACAGG+CGG 0.617927 8_2:-14568250 Msa1236100:CDS
AAGCCCTGTAAGTCAACATG+AGG 0.619652 8_2:-14565869 Msa1236100:CDS
AGGTCGCACAGTAAATCCAT+AGG 0.619964 8_2:+14573310 None:intergenic
AGGAGCTGAGGAATAAACAT+AGG 0.621180 8_2:-14570655 Msa1236100:CDS
CAAGGACACGAAGCCTCTAG+TGG 0.621659 8_2:+14572486 None:intergenic
TATAACAACAAAATTACAGA+CGG 0.621669 8_2:+14565750 None:intergenic
AGCAAACTTATCCTCCTGGT+AGG 0.622299 8_2:+14566068 None:intergenic
TAATTACATTCGATCACAAG+AGG 0.624018 8_2:-14573693 Msa1236100:intron
AAATTAGTGTGAGGACTCGA+GGG 0.624983 8_2:-14565030 Msa1236100:three_prime_UTR
TTGGAAGTTCTTGTTCGTGG+GGG 0.625449 8_2:-14572453 Msa1236100:CDS
GCACATGCACACTCATCAAG+CGG 0.625693 8_2:+14573870 None:intergenic
TTGCATGGGTGACTGGACCA+TGG 0.630069 8_2:-14571157 Msa1236100:CDS
TGAGTACGCTAGCATTTACA+AGG 0.633990 8_2:-14573267 Msa1236100:intron
GTTGGAAGTTCTTGTTCGTG+GGG 0.634337 8_2:-14572454 Msa1236100:CDS
GAGTCACTATCTCTTGCTGA+TGG 0.635928 8_2:-14572648 Msa1236100:CDS
TGAAAGAAATAAGAAAGGTG+TGG 0.636747 8_2:-14572697 Msa1236100:CDS
AAGTTCGATTGCAGGAGCTG+AGG 0.637148 8_2:-14570667 Msa1236100:CDS
TCCAGCCTTGGTAACAACAA+AGG 0.637738 8_2:-14570792 Msa1236100:CDS
GGGGAGTTCCAATGGCACTG+AGG 0.638061 8_2:-14572434 Msa1236100:CDS
AGGAGTTCTATGATGTTGAG+AGG 0.638153 8_2:-14572584 Msa1236100:CDS
ATGGAAAGGACAGATTGAGA+AGG 0.639006 8_2:-14572141 Msa1236100:intron
TTTCTGATAGGTCTTGATGC+GGG 0.639713 8_2:-14567322 Msa1236100:intron
GGACACAAACAGAACACCTG+TGG 0.641708 8_2:-14572973 Msa1236100:CDS
AAAGCTTTGAGGGATGCTAA+GGG 0.642149 8_2:-14570590 Msa1236100:CDS
ACCTGACAGTAACCAACAGA+GGG 0.642883 8_2:+14571915 None:intergenic
GACAACGCATAATATATGCA+AGG 0.647196 8_2:+14564816 None:intergenic
CAATTGAAGAAAGATCAAAA+GGG 0.650314 8_2:-14570616 Msa1236100:CDS
TGAAAATGGTAGTCAAAAGG+AGG 0.652128 8_2:-14572847 Msa1236100:CDS
GTACTCAAGCCATCAACAAG+AGG 0.653340 8_2:+14572540 None:intergenic
AAACAATCAAGAGCCTACGA+TGG 0.655319 8_2:-14566096 Msa1236100:CDS
CTAAACTGCAACCATCTCCA+CGG 0.655642 8_2:-14566479 Msa1236100:intron
TTCGTGTTAATAAGAAAACT+GGG 0.656298 8_2:-14572731 Msa1236100:CDS
GAGTTAAACAAATTAGTGTG+AGG 0.658730 8_2:-14565039 Msa1236100:three_prime_UTR
CAGGCGGGAACTGAGCGCCA+AGG 0.658763 8_2:-14568234 Msa1236100:intron
CCTGATGCTAGCTCAGAGAA+GGG 0.661370 8_2:-14572906 Msa1236100:CDS
GGGTGACCAGGAAATGTCCG+CGG 0.668654 8_2:+14572002 None:intergenic
AAAACCTGACCACTTTCCCA+AGG 0.674975 8_2:+14571107 None:intergenic
TTGTGGGTGTCAAAGCAAGG+CGG 0.684016 8_2:-14572292 Msa1236100:CDS
GGAGTTCCAATGGCACTGAG+GGG 0.686267 8_2:-14572432 Msa1236100:CDS
GACCTGACAGTAACCAACAG+AGG 0.688150 8_2:+14571914 None:intergenic
AGCCCTGTAAGTCAACATGA+GGG 0.698307 8_2:-14565868 Msa1236100:CDS
ATGTGAGGAAGATTCTGACG+AGG 0.698919 8_2:-14572604 Msa1236100:CDS
TGTTTGTGCAGGATCTGCCG+CGG 0.713471 8_2:-14572019 Msa1236100:intron
AAATAACGAGAGCTACAATG+TGG 0.721563 8_2:+14564756 None:intergenic
AAGAAGAGGAAAGGTCCGAG+CGG 0.722767 8_2:-14573043 Msa1236100:CDS
ACACAAACAGAACACCTGTG+GGG 0.727670 8_2:-14572971 Msa1236100:CDS
CGATGGATACCCCTACCAGG+AGG 0.749834 8_2:-14566079 Msa1236100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATATTAATTTTGAAAAAAA+TGG + chr8_2:14565239-14565258 None:intergenic 10.0%
!! AAAAATAAAAATATGTAAGT+GGG + chr8_2:14570579-14570598 None:intergenic 10.0%
!! AAAAAATAAAAATATGTAAG+TGG + chr8_2:14570580-14570599 None:intergenic 10.0%
!!! TACATATTTTTATTTTTTGA+TGG - chr8_2:14570582-14570601 Msa1236100:CDS 10.0%
!!! ACATATTTTTATTTTTTGAT+GGG - chr8_2:14570583-14570602 Msa1236100:CDS 10.0%
!!! TTTTATTAAATAGAAGAAAT+TGG + chr8_2:14572328-14572347 None:intergenic 10.0%
!!! TTCATAATATTCATATTTTT+TGG - chr8_2:14573423-14573442 Msa1236100:intron 10.0%
!!! TCATAATATTCATATTTTTT+GGG - chr8_2:14573424-14573443 Msa1236100:intron 10.0%
!! TCTCATATTTATAATATGAT+GGG + chr8_2:14566190-14566209 None:intergenic 15.0%
!! ATCTCATATTTATAATATGA+TGG + chr8_2:14566191-14566210 None:intergenic 15.0%
!! ATTAAAAGTAATCATCAAAA+CGG - chr8_2:14566368-14566387 Msa1236100:intron 15.0%
!! TTAAAATATTGAAAAATACC+AGG + chr8_2:14566756-14566775 None:intergenic 15.0%
!!! ATTTTAGATGATTATTTTGA+TGG - chr8_2:14567083-14567102 Msa1236100:intron 15.0%
!!! AAATACATATTCATTTTATC+AGG - chr8_2:14567219-14567238 Msa1236100:intron 15.0%
!! ACAAATAATTACAATAAATC+AGG + chr8_2:14567587-14567606 None:intergenic 15.0%
!! TACAAATAAAACAAGATATA+TGG + chr8_2:14569279-14569298 None:intergenic 15.0%
!! AAGAAAATAAAGAAAGATAT+AGG - chr8_2:14569582-14569601 Msa1236100:intron 15.0%
!! GTATCAATTTAAATTACAAA+AGG - chr8_2:14570225-14570244 Msa1236100:intron 15.0%
!! AATAAAATTTGAAAGAGAAA+AGG + chr8_2:14571386-14571405 None:intergenic 15.0%
!!! AACATACTATTTTTTCATTA+TGG - chr8_2:14571559-14571578 Msa1236100:intron 15.0%
!! TTCAAATTATTATTACAGAA+GGG + chr8_2:14571762-14571781 None:intergenic 15.0%
!! ATTCAAATTATTATTACAGA+AGG + chr8_2:14571763-14571782 None:intergenic 15.0%
!!! ATCATATTTTATTATTTTGC+AGG - chr8_2:14571985-14572004 Msa1236100:CDS 15.0%
!! CAAAAAAAGAATAATAGTAT+TGG - chr8_2:14572947-14572966 Msa1236100:CDS 15.0%
!! TATTATATATAAAAGTGAGA+AGG - chr8_2:14573043-14573062 Msa1236100:CDS 15.0%
!!! TTTACTTTTCCATTATATTT+AGG + chr8_2:14573086-14573105 None:intergenic 15.0%
!! GTTTAATATGACAAAATAAA+TGG - chr8_2:14573180-14573199 Msa1236100:intron 15.0%
!!! AATTTAAAGACCTTTTTTTT+AGG - chr8_2:14573288-14573307 Msa1236100:CDS 15.0%
!!! ATTTAAAGACCTTTTTTTTA+GGG - chr8_2:14573289-14573308 Msa1236100:CDS 15.0%
!!! CATAATATTCATATTTTTTG+GGG - chr8_2:14573425-14573444 Msa1236100:intron 15.0%
!!! ATAATATTCATATTTTTTGG+GGG - chr8_2:14573426-14573445 Msa1236100:intron 15.0%
!! ACGGTTAAAAATTGAAAAAA+AGG + chr8_2:14565016-14565035 None:intergenic 20.0%
!! TAGAAAGATAAAAGCAAAAA+CGG + chr8_2:14565035-14565054 None:intergenic 20.0%
!!! GTTTACAATTTTTACTTTTC+AGG - chr8_2:14565520-14565539 Msa1236100:three_prime_UTR 20.0%
!!! CTTATTTCTTTCATCTTTTA+CGG + chr8_2:14565885-14565904 None:intergenic 20.0%
!! AAAGATGAAAGAAATAAGAA+AGG - chr8_2:14565887-14565906 Msa1236100:CDS 20.0%
!! TTAAAAGTAATCATCAAAAC+GGG - chr8_2:14566369-14566388 Msa1236100:intron 20.0%
!!! TTTATAAAAGAAGTTTTTCC+TGG - chr8_2:14566735-14566754 Msa1236100:intron 20.0%
!!! TCAATATTTTAATGACTTGT+TGG - chr8_2:14566764-14566783 Msa1236100:intron 20.0%
!!! CAATATTTTAATGACTTGTT+GGG - chr8_2:14566765-14566784 Msa1236100:intron 20.0%
!! GACATGAAAAAGATTTAAAT+CGG + chr8_2:14567305-14567324 None:intergenic 20.0%
!! AATAATTACAATAAATCAGG+AGG + chr8_2:14567584-14567603 None:intergenic 20.0%
!!! TGAAAATGTTTGTTGTTTAT+TGG - chr8_2:14567706-14567725 Msa1236100:intron 20.0%
!!! ATCGAACTTCATTTATATTT+TGG + chr8_2:14567911-14567930 None:intergenic 20.0%
!! TTAAAGATAAATGCACTAAT+TGG + chr8_2:14568357-14568376 None:intergenic 20.0%
!! TATTATGCAAATGTTTATCA+AGG + chr8_2:14568445-14568464 None:intergenic 20.0%
!! AAACATTTGCATAATACTTA+TGG - chr8_2:14568449-14568468 Msa1236100:intron 20.0%
!! TTTATCAAGGAATAAAATTG+AGG + chr8_2:14568595-14568614 None:intergenic 20.0%
!!! TAAACATGTGAAAATGTTTT+TGG - chr8_2:14568611-14568630 Msa1236100:intron 20.0%
!! TTTGAAAACCTAATTTGAAA+AGG - chr8_2:14568829-14568848 Msa1236100:intron 20.0%
!! TTATCTCCTATAAAAAGTTT+AGG - chr8_2:14568911-14568930 Msa1236100:intron 20.0%
!!! TTTAGTTTTACTTGAATGAA+TGG - chr8_2:14568953-14568972 Msa1236100:intron 20.0%
!! TACTAATAAAGATTTCACAT+GGG + chr8_2:14569143-14569162 None:intergenic 20.0%
!! TTACTAATAAAGATTTCACA+TGG + chr8_2:14569144-14569163 None:intergenic 20.0%
!!! ATTTATCCTCTATTTTAACT+TGG + chr8_2:14569177-14569196 None:intergenic 20.0%
!!! TTTTTTAAATAACTTAGCCA+CGG - chr8_2:14569222-14569241 Msa1236100:intron 20.0%
!!! GGTAAGAATTCTTTTTTAAA+TGG - chr8_2:14569543-14569562 Msa1236100:intron 20.0%
!!! TCTACAATTAGATTGTATTT+TGG + chr8_2:14569636-14569655 None:intergenic 20.0%
!!! TGGTTTTTATTCTTCAAATT+GGG + chr8_2:14570695-14570714 None:intergenic 20.0%
!!! TTGGTTTTTATTCTTCAAAT+TGG + chr8_2:14570696-14570715 None:intergenic 20.0%
!!! TAATAAGAAAACACCAATTT+TGG + chr8_2:14570847-14570866 None:intergenic 20.0%
!! AATATAGAATATGCCAAAAA+TGG + chr8_2:14570908-14570927 None:intergenic 20.0%
!! ATACTTTCTTTAAGCAAAAT+AGG - chr8_2:14571217-14571236 Msa1236100:intron 20.0%
!!! TGTAAGAATTTATTTCTGAT+AGG - chr8_2:14571255-14571274 Msa1236100:intron 20.0%
!!! AAAATTTTACCCTTAATGTA+GGG + chr8_2:14571718-14571737 None:intergenic 20.0%
!!! TAAAATTTTACCCTTAATGT+AGG + chr8_2:14571719-14571738 None:intergenic 20.0%
!! TGTAATAATAATTTGAATGC+TGG - chr8_2:14571765-14571784 Msa1236100:CDS 20.0%
!! AAATATAATTTAGCAGTACA+AGG + chr8_2:14571916-14571935 None:intergenic 20.0%
!! TTATATTTCAATCATCACAA+TGG - chr8_2:14571928-14571947 Msa1236100:CDS 20.0%
!!! AGAAATTGGTGTTTATTTTT+GGG + chr8_2:14572314-14572333 None:intergenic 20.0%
!!! AAGAAATTGGTGTTTATTTT+TGG + chr8_2:14572315-14572334 None:intergenic 20.0%
!! TATAACAACAAAATTACAGA+CGG + chr8_2:14572842-14572861 None:intergenic 20.0%
!! TAGTATTATGATCTGTATAA+AGG + chr8_2:14573004-14573023 None:intergenic 20.0%
!! AATGAGATTCCTAAATATAA+TGG - chr8_2:14573074-14573093 Msa1236100:intron 20.0%
!!! TGAGTGGATAATATTTTTAA+AGG - chr8_2:14573107-14573126 Msa1236100:intron 20.0%
!!! CTTTAACTCATTCAATTTTA+TGG + chr8_2:14573230-14573249 None:intergenic 20.0%
!! TGAGTTAAAGAAATGTATAA+TGG - chr8_2:14573240-14573259 Msa1236100:intron 20.0%
!! GAGTTAAAGAAATGTATAAT+GGG - chr8_2:14573241-14573260 Msa1236100:intron 20.0%
!! TATTACATTCCCTAAAAAAA+AGG + chr8_2:14573301-14573320 None:intergenic 20.0%
!! TGTTATACAATTATCTAAAC+AGG - chr8_2:14573392-14573411 Msa1236100:intron 20.0%
!!! TAATATTCATATTTTTTGGG+GGG - chr8_2:14573427-14573446 Msa1236100:intron 20.0%
!! TAAAAAAAATAGAGACCAAA+AGG - chr8_2:14573610-14573629 Msa1236100:intron 20.0%
!!! TTTGTTTGTTTTTTTTCTTC+TGG - chr8_2:14573728-14573747 Msa1236100:CDS 20.0%
!! GAAATACAGATTTTCTGATT+TGG + chr8_2:14565479-14565498 None:intergenic 25.0%
! ATTGTAAACACAAAAGAAGT+GGG + chr8_2:14565509-14565528 None:intergenic 25.0%
! AATTGTAAACACAAAAGAAG+TGG + chr8_2:14565510-14565529 None:intergenic 25.0%
!!! TACAATTTTTACTTTTCAGG+AGG - chr8_2:14565523-14565542 Msa1236100:three_prime_UTR 25.0%
! AGTATTAAGAGATGATCTTA+TGG + chr8_2:14565819-14565838 None:intergenic 25.0%
! ATCATCTCTTAATACTATTG+AGG - chr8_2:14565823-14565842 Msa1236100:exon 25.0%
! ATTCGTGTTAATAAGAAAAC+TGG - chr8_2:14565857-14565876 Msa1236100:CDS 25.0%
! TTCGTGTTAATAAGAAAACT+GGG - chr8_2:14565858-14565877 Msa1236100:CDS 25.0%
! AAATCCAAGAAAGCTTAATA+AGG + chr8_2:14566872-14566891 None:intergenic 25.0%
!! AAATAGCTTCATCCTTTTAA+AGG - chr8_2:14566940-14566959 Msa1236100:intron 25.0%
! ATAGCTAGTACAAATTAGTA+CGG + chr8_2:14567037-14567056 None:intergenic 25.0%
!! TACATATTCATTTTATCAGG+TGG - chr8_2:14567222-14567241 Msa1236100:intron 25.0%
! CAATTGAAGAAAGATCAAAA+GGG - chr8_2:14567973-14567992 Msa1236100:intron 25.0%
!!! GAAATTTTGATTAGTCTTAC+TGG - chr8_2:14568110-14568129 Msa1236100:intron 25.0%
!!! GTTTTTTTAACTTTCTGTCT+TGG + chr8_2:14568306-14568325 None:intergenic 25.0%
! AGTTATATAACATGTTCATG+AGG - chr8_2:14568326-14568345 Msa1236100:intron 25.0%
!! ACATTTTCACATGTTTATCA+AGG + chr8_2:14568608-14568627 None:intergenic 25.0%
!! AATTAGGTTTTCAAAGTAAC+AGG + chr8_2:14568824-14568843 None:intergenic 25.0%
! TCCTATAAAAAGTTTAGGAA+AGG - chr8_2:14568916-14568935 Msa1236100:intron 25.0%
!! ACCTTTCCTAAACTTTTTAT+AGG + chr8_2:14568920-14568939 None:intergenic 25.0%
! TAAAAAGTTTAGGAAAGGTT+AGG - chr8_2:14568921-14568940 Msa1236100:intron 25.0%
!!! CTGTCTGTTTTTTTTTTGTT+CGG + chr8_2:14568985-14569004 None:intergenic 25.0%
! AAAAAAAAACAGACAGTGAA+AGG - chr8_2:14568989-14569008 Msa1236100:intron 25.0%
!! ATTACATGATGCTGTTATTT+AGG - chr8_2:14569059-14569078 Msa1236100:intron 25.0%
!!! TGCTGTTATTTAGGTTTTTA+TGG - chr8_2:14569068-14569087 Msa1236100:intron 25.0%
! TAAAGTATAATTGTATTCCG+TGG + chr8_2:14569242-14569261 None:intergenic 25.0%
! ACAAGATATATGGTCATTTA+TGG + chr8_2:14569269-14569288 None:intergenic 25.0%
! TAAATGGAGATATGAAAGTA+TGG - chr8_2:14569559-14569578 Msa1236100:intron 25.0%
!!! TAGAAACTGACTTTTATTGA+TGG - chr8_2:14569652-14569671 Msa1236100:intron 25.0%
!! TTCTAAATTTAGAACACTCA+CGG + chr8_2:14569837-14569856 None:intergenic 25.0%
!!! TTTTTTACATTTGAAGAGCT+TGG - chr8_2:14570030-14570049 Msa1236100:intron 25.0%
!! TTTTTACATTTGAAGAGCTT+GGG - chr8_2:14570031-14570050 Msa1236100:intron 25.0%
! ACATAATAATAAGATTAGCG+TGG - chr8_2:14570176-14570195 Msa1236100:intron 25.0%
! TAAATGTTACATGCAAAAGT+GGG + chr8_2:14570259-14570278 None:intergenic 25.0%
! ATAAATGTTACATGCAAAAG+TGG + chr8_2:14570260-14570279 None:intergenic 25.0%
! ATGGATATGATAATAAACCA+TGG + chr8_2:14570670-14570689 None:intergenic 25.0%
!! GGTTTTTATTCTTCAAATTG+GGG + chr8_2:14570694-14570713 None:intergenic 25.0%
!! AATATTGCGTTATCCATTTT+TGG - chr8_2:14570892-14570911 Msa1236100:intron 25.0%
!! TGGCATATTCTATATTTTCT+TGG - chr8_2:14570912-14570931 Msa1236100:intron 25.0%
!! TTTTCATTATGGTATTCGTT+AGG - chr8_2:14571570-14571589 Msa1236100:intron 25.0%
! TAGTGCATTTAAAAGAAGTA+TGG + chr8_2:14571832-14571851 None:intergenic 25.0%
! AGCTAAACCCAAAAAAATTT+GGG + chr8_2:14572183-14572202 None:intergenic 25.0%
! AAGCTAAACCCAAAAAAATT+TGG + chr8_2:14572184-14572203 None:intergenic 25.0%
!!! GAAATTGGTGTTTATTTTTG+GGG + chr8_2:14572313-14572332 None:intergenic 25.0%
! ATAAAAATGTCAAAAGTTGC+TGG - chr8_2:14572342-14572361 Msa1236100:intron 25.0%
!!! GTCTGTAATTTTGTTGTTAT+AGG - chr8_2:14572841-14572860 Msa1236100:CDS 25.0%
! GTTCTTTATTACTATGTCAT+AGG - chr8_2:14572899-14572918 Msa1236100:CDS 25.0%
! ATGTCATAGGATAATAGTAT+TGG - chr8_2:14572912-14572931 Msa1236100:CDS 25.0%
! TAATGGAAAAGTAAATTGAG+TGG - chr8_2:14573091-14573110 Msa1236100:intron 25.0%
!! CATTCAATTTTATGGACAAT+GGG + chr8_2:14573222-14573241 None:intergenic 25.0%
!! TCATTCAATTTTATGGACAA+TGG + chr8_2:14573223-14573242 None:intergenic 25.0%
!! TAAAGAAATGTATAATGGGA+TGG - chr8_2:14573245-14573264 Msa1236100:intron 25.0%
! TTTCAGCTACTATGAATATA+AGG + chr8_2:14573460-14573479 None:intergenic 25.0%
! TAAACTTAGCTCAATTGTTA+GGG + chr8_2:14573798-14573817 None:intergenic 25.0%
! TTAAACTTAGCTCAATTGTT+AGG + chr8_2:14573799-14573818 None:intergenic 25.0%
! ATCAAAGTACAACAAGAATT+GGG + chr8_2:14573869-14573888 None:intergenic 25.0%
! AATCAAAGTACAACAAGAAT+TGG + chr8_2:14573870-14573889 None:intergenic 25.0%
TTGTGATCGAATGTAATTAC+AGG + chr8_2:14564895-14564914 None:intergenic 30.0%
TAATTACATTCGATCACAAG+AGG - chr8_2:14564896-14564915 Msa1236100:three_prime_UTR 30.0%
GATGAGAAAGTAGAATTAGA+TGG + chr8_2:14564968-14564987 None:intergenic 30.0%
! TACTTTCTCATCGCATTTTT+AGG - chr8_2:14564976-14564995 Msa1236100:three_prime_UTR 30.0%
! ACTTTCTCATCGCATTTTTA+GGG - chr8_2:14564977-14564996 Msa1236100:three_prime_UTR 30.0%
CCTAGCAAAGAATTAAGAAA+TGG + chr8_2:14565198-14565217 None:intergenic 30.0%
CCATTTCTTAATTCTTTGCT+AGG - chr8_2:14565195-14565214 Msa1236100:three_prime_UTR 30.0%
TTCCACTGAAAATTGAAATG+TGG + chr8_2:14565379-14565398 None:intergenic 30.0%
TGAAAGAAATAAGAAAGGTG+TGG - chr8_2:14565892-14565911 Msa1236100:CDS 30.0%
AAGCACAAGAAAAAACATGA+GGG + chr8_2:14566261-14566280 None:intergenic 30.0%
AAAGCACAAGAAAAAACATG+AGG + chr8_2:14566262-14566281 None:intergenic 30.0%
TTTAATTCCAGAATCACCAT+TGG + chr8_2:14566354-14566373 None:intergenic 30.0%
TCAAATAAGATCTCGTCAAA+AGG - chr8_2:14566533-14566552 Msa1236100:CDS 30.0%
TAAGCCAGCAAAAAAATTCA+TGG + chr8_2:14566808-14566827 None:intergenic 30.0%
TTAAGCTTTCTTGGATTTCT+AGG - chr8_2:14566874-14566893 Msa1236100:intron 30.0%
TAAGCTTTCTTGGATTTCTA+GGG - chr8_2:14566875-14566894 Msa1236100:intron 30.0%
ATATGAAAGCTGCAAAAGTA+GGG + chr8_2:14567007-14567026 None:intergenic 30.0%
AATATGAAAGCTGCAAAAGT+AGG + chr8_2:14567008-14567027 None:intergenic 30.0%
! GTACTAATTTGTACTAGCTA+TGG - chr8_2:14567036-14567055 Msa1236100:intron 30.0%
!! TTTTGATGGCTATTATTCAG+AGG - chr8_2:14567097-14567116 Msa1236100:intron 30.0%
!!! TCAACTTGTTTTTGAAGAGT+TGG - chr8_2:14567246-14567265 Msa1236100:CDS 30.0%
ACAAAAATGGAAAGAAACCA+TGG + chr8_2:14567452-14567471 None:intergenic 30.0%
TTAATGGAGCTATATGGTAT+TGG - chr8_2:14567682-14567701 Msa1236100:intron 30.0%
AATTAAGTCTCGTGAAGATA+TGG + chr8_2:14567760-14567779 None:intergenic 30.0%
TATAAATGAAGTTCGATTGC+AGG - chr8_2:14567914-14567933 Msa1236100:intron 30.0%
GCAATTGAAGAAAGATCAAA+AGG - chr8_2:14567972-14567991 Msa1236100:intron 30.0%
AAGATAAATGCACTAATTGG+TGG + chr8_2:14568354-14568373 None:intergenic 30.0%
TTGAACTCATTGAAAACTTG+TGG + chr8_2:14568392-14568411 None:intergenic 30.0%
TCAAGGTATAAAGTTGTTGA+GGG + chr8_2:14568428-14568447 None:intergenic 30.0%
ATCAAGGTATAAAGTTGTTG+AGG + chr8_2:14568429-14568448 None:intergenic 30.0%
TGGTATGTAATTAGTTCAAG+TGG - chr8_2:14568523-14568542 Msa1236100:intron 30.0%
GGTATGTAATTAGTTCAAGT+GGG - chr8_2:14568524-14568543 Msa1236100:intron 30.0%
AAGGAATAAAATTGAGGTGA+AGG + chr8_2:14568589-14568608 None:intergenic 30.0%
!! TTGTTTTACTGTATAGCACT+CGG - chr8_2:14568773-14568792 Msa1236100:intron 30.0%
AAGTCACCAAGTTAAAATAG+AGG - chr8_2:14569168-14569187 Msa1236100:intron 30.0%
CTATTCTCAGGTACTTAAAA+TGG - chr8_2:14569508-14569527 Msa1236100:intron 30.0%
TCAGGTACTTAAAATGGTAT+TGG - chr8_2:14569514-14569533 Msa1236100:intron 30.0%
!! TTAAAATGGTATTGGCTCTT+TGG - chr8_2:14569522-14569541 Msa1236100:intron 30.0%
GTGTGTAATTCTGTTTATGT+TGG + chr8_2:14569690-14569709 None:intergenic 30.0%
GCAGAATTTACACATAACTA+AGG - chr8_2:14569720-14569739 Msa1236100:intron 30.0%
CTAAGTCTATAGTGCAATAA+CGG + chr8_2:14569870-14569889 None:intergenic 30.0%
GTTACATCAGATAAGACTAT+AGG + chr8_2:14569943-14569962 None:intergenic 30.0%
TAACACAAATGTTGATGTAC+TGG - chr8_2:14569959-14569978 Msa1236100:intron 30.0%
AACACAAATGTTGATGTACT+GGG - chr8_2:14569960-14569979 Msa1236100:intron 30.0%
ATCATACTCTATAACCACTT+GGG - chr8_2:14570117-14570136 Msa1236100:intron 30.0%
AATTGATACTCCCATTGTAA+AGG + chr8_2:14570214-14570233 None:intergenic 30.0%
AAATGTTACATGCAAAAGTG+GGG + chr8_2:14570258-14570277 None:intergenic 30.0%
GTAAAAGGGAAGAAATTTGA+AGG + chr8_2:14570284-14570303 None:intergenic 30.0%
TTTCTCATTGTACTGCAAAT+AGG - chr8_2:14570457-14570476 Msa1236100:CDS 30.0%
TGATAAGTGATTACTAGAGA+AGG + chr8_2:14570493-14570512 None:intergenic 30.0%
CACTTATCAAGCAGTTAAAT+TGG - chr8_2:14570504-14570523 Msa1236100:CDS 30.0%
GATAATAAACCATGGTTGAT+TGG + chr8_2:14570662-14570681 None:intergenic 30.0%
CTATTCAACACTGTAATAGT+TGG + chr8_2:14570715-14570734 None:intergenic 30.0%
! CAACTATTACAGTGTTGAAT+AGG - chr8_2:14570713-14570732 Msa1236100:CDS 30.0%
!! AAACACCAATTTTGGCATAT+TGG + chr8_2:14570839-14570858 None:intergenic 30.0%
GACAGCTAATGTAACAAATT+GGG + chr8_2:14571032-14571051 None:intergenic 30.0%
AGACAGCTAATGTAACAAAT+TGG + chr8_2:14571033-14571052 None:intergenic 30.0%
TGTAAATTCTTATCATCTCC+AGG - chr8_2:14571091-14571110 Msa1236100:intron 30.0%
ACTTTCTGATAAACAAGAAC+AGG - chr8_2:14571154-14571173 Msa1236100:CDS 30.0%
TAGATACTGATGGAATAGAA+TGG + chr8_2:14571413-14571432 None:intergenic 30.0%
!! AATCAGTTTTGATCTGTAGT+TGG - chr8_2:14571498-14571517 Msa1236100:CDS 30.0%
!! ATCAGTTTTGATCTGTAGTT+GGG - chr8_2:14571499-14571518 Msa1236100:CDS 30.0%
TTTCACAATTATTCTGCCAT+AGG - chr8_2:14571680-14571699 Msa1236100:intron 30.0%
CTAAACCCAAAAAAATTTGG+GGG + chr8_2:14572181-14572200 None:intergenic 30.0%
GCTAAACCCAAAAAAATTTG+GGG + chr8_2:14572182-14572201 None:intergenic 30.0%
AAAAGTTGCTGGAGAAATAT+CGG - chr8_2:14572353-14572372 Msa1236100:intron 30.0%
TGAAGATCTATAAAGCAAGA+CGG + chr8_2:14572450-14572469 None:intergenic 30.0%
CTTGCTAATGTTCTTTATTG+TGG - chr8_2:14572627-14572646 Msa1236100:CDS 30.0%
ATTCAAAGTCAACACATACA+AGG + chr8_2:14572660-14572679 None:intergenic 30.0%
!! TGTATGTGTTGACTTTGAAT+AGG - chr8_2:14572660-14572679 Msa1236100:CDS 30.0%
!! GTATGTGTTGACTTTGAATA+GGG - chr8_2:14572661-14572680 Msa1236100:CDS 30.0%
!! TATGTGTTGACTTTGAATAG+GGG - chr8_2:14572662-14572681 Msa1236100:CDS 30.0%
GAGTTAAACAAATTAGTGTG+AGG - chr8_2:14573550-14573569 Msa1236100:intron 30.0%
! ACTTATGCTTAAATGCCTTT+TGG + chr8_2:14573628-14573647 None:intergenic 30.0%
! AGTTGAAGTTTCTAGATATG+TGG - chr8_2:14573702-14573721 Msa1236100:CDS 30.0%
!!! GTTTGTTTTTTTTCTTCTGG+TGG - chr8_2:14573731-14573750 Msa1236100:CDS 30.0%
!!! TTTTTTTTCTTCTGGTGGTT+GGG - chr8_2:14573736-14573755 Msa1236100:CDS 30.0%
TTGAGCTAAGTTTAAACTGT+TGG - chr8_2:14573804-14573823 Msa1236100:five_prime_UTR 30.0%
TGAGCTAAGTTTAAACTGTT+GGG - chr8_2:14573805-14573824 Msa1236100:five_prime_UTR 30.0%
!! GTCTTGTTCATTTTGTGGAT+CGG + chr8_2:14564841-14564860 None:intergenic 35.0%
GTAGAATTAGATGGATCTAG+TGG + chr8_2:14564959-14564978 None:intergenic 35.0%
TAATATGTGTGTGTGTCAAC+AGG - chr8_2:14565252-14565271 Msa1236100:three_prime_UTR 35.0%
AATATGTGTGTGTGTCAACA+GGG - chr8_2:14565253-14565272 Msa1236100:three_prime_UTR 35.0%
ATTGAAATGTGGCAAGGATA+TGG + chr8_2:14565368-14565387 None:intergenic 35.0%
CTGAAAATTGAAATGTGGCA+AGG + chr8_2:14565374-14565393 None:intergenic 35.0%
! TGCCACATTTCAATTTTCAG+TGG - chr8_2:14565374-14565393 Msa1236100:three_prime_UTR 35.0%
!!! GGTGGAAGTCTTTTTTAGAT+AGG - chr8_2:14565567-14565586 Msa1236100:three_prime_UTR 35.0%
!!! GAAGTCTTTTTTAGATAGGC+AGG - chr8_2:14565571-14565590 Msa1236100:three_prime_UTR 35.0%
!! TTTTGACTACCATTTTCAGG+TGG + chr8_2:14565740-14565759 None:intergenic 35.0%
ACCTGAAAATGGTAGTCAAA+AGG - chr8_2:14565739-14565758 Msa1236100:three_prime_UTR 35.0%
!! TCCTTTTGACTACCATTTTC+AGG + chr8_2:14565743-14565762 None:intergenic 35.0%
TGAAAATGGTAGTCAAAAGG+AGG - chr8_2:14565742-14565761 Msa1236100:three_prime_UTR 35.0%
TCTATGAATTCTAGTCTCCT+CGG + chr8_2:14565780-14565799 None:intergenic 35.0%
GAATTCATAGAGTCCAGTTA+TGG - chr8_2:14565789-14565808 Msa1236100:three_prime_UTR 35.0%
ATCTTATGGTTGACCATAAC+TGG + chr8_2:14565805-14565824 None:intergenic 35.0%
GATGGTGCAAAATCATCAAA+AGG - chr8_2:14565959-14565978 Msa1236100:intron 35.0%
!! TTTTTCTTGTGCTTTAGCTC+TGG - chr8_2:14566267-14566286 Msa1236100:intron 35.0%
! GAAGTATTATCAGGATCTAC+TGG - chr8_2:14566325-14566344 Msa1236100:intron 35.0%
TCATGCATGTACCAGAAAAA+TGG - chr8_2:14566429-14566448 Msa1236100:intron 35.0%
CATGTACCAGAAAAATGGAA+AGG - chr8_2:14566434-14566453 Msa1236100:intron 35.0%
!! ATCTGTCCTTTCCATTTTTC+TGG + chr8_2:14566443-14566462 None:intergenic 35.0%
CTGCACAAACAATCAACAAT+TGG + chr8_2:14566561-14566580 None:intergenic 35.0%
! CAATTGTTGATTGTTTGTGC+AGG - chr8_2:14566559-14566578 Msa1236100:CDS 35.0%
GTTGGGATAATTCAAATTGC+AGG - chr8_2:14566782-14566801 Msa1236100:intron 35.0%
CTTAATAAGGACCTACCAAA+AGG + chr8_2:14566859-14566878 None:intergenic 35.0%
AGGTCCTTATTAAGCTTTCT+TGG - chr8_2:14566865-14566884 Msa1236100:intron 35.0%
CATATGCAGGAACCTTTAAA+AGG + chr8_2:14566955-14566974 None:intergenic 35.0%
!!! ACTAGCTATGGTTTTTTGTC+AGG - chr8_2:14567048-14567067 Msa1236100:intron 35.0%
!!! TTTTTTGTCAGGACCTTGAT+GGG - chr8_2:14567059-14567078 Msa1236100:intron 35.0%
! ATCATCTAAAATGCCCATCA+AGG + chr8_2:14567075-14567094 None:intergenic 35.0%
!!! TTGTTTTTGAAGAGTTGGTG+CGG - chr8_2:14567251-14567270 Msa1236100:CDS 35.0%
TCGGTATACAAACCCAATTT+GGG + chr8_2:14567286-14567305 None:intergenic 35.0%
ATCGGTATACAAACCCAATT+TGG + chr8_2:14567287-14567306 None:intergenic 35.0%
AGCCAATCATCTAGATTATC+TGG - chr8_2:14567400-14567419 Msa1236100:intron 35.0%
GCCAATCATCTAGATTATCT+GGG - chr8_2:14567401-14567420 Msa1236100:intron 35.0%
TCCCAGATAATCTAGATGAT+TGG + chr8_2:14567405-14567424 None:intergenic 35.0%
! AGGAAGCATGTTCACAAAAA+TGG + chr8_2:14567465-14567484 None:intergenic 35.0%
! TTTTTGTGAACATGCTTCCT+TGG - chr8_2:14567465-14567484 Msa1236100:CDS 35.0%
! TTTTGTGAACATGCTTCCTT+GGG - chr8_2:14567466-14567485 Msa1236100:CDS 35.0%
AATAAATCAGGAGGAAGCTT+AGG + chr8_2:14567575-14567594 None:intergenic 35.0%
!! CAGTTCTAAATAGCATGACT+CGG + chr8_2:14567654-14567673 None:intergenic 35.0%
! TAGAACTGCAGTTGCTTTAA+TGG - chr8_2:14567666-14567685 Msa1236100:intron 35.0%
! GTTGCTTTAATGGAGCTATA+TGG - chr8_2:14567676-14567695 Msa1236100:intron 35.0%
TTAATTGCACCATGTCTTGT+AGG - chr8_2:14567774-14567793 Msa1236100:intron 35.0%
ACTTTACTTCAGTCATTAGC+CGG - chr8_2:14567837-14567856 Msa1236100:intron 35.0%
! AAAAGGGCTTAAAGCTTTGA+GGG - chr8_2:14567989-14568008 Msa1236100:intron 35.0%
AATTTATCCCGTACAGAATC+TGG - chr8_2:14568071-14568090 Msa1236100:intron 35.0%
TTGTAGAACCAGATTCTGTA+CGG + chr8_2:14568082-14568101 None:intergenic 35.0%
!! TTTGATTAGTCTTACTGGAG+AGG - chr8_2:14568115-14568134 Msa1236100:intron 35.0%
!! TTGATTAGTCTTACTGGAGA+GGG - chr8_2:14568116-14568135 Msa1236100:intron 35.0%
TTGTTAGAACGTGAAGTTGA+AGG - chr8_2:14568213-14568232 Msa1236100:intron 35.0%
! TTTTCAATGAGTTCAAGTGC+TGG - chr8_2:14568396-14568415 Msa1236100:intron 35.0%
GTATAAAGTTGTTGAGGGAA+AGG + chr8_2:14568423-14568442 None:intergenic 35.0%
CCTCTATGTTTATCAGAGTT+GGG - chr8_2:14568492-14568511 Msa1236100:intron 35.0%
!! ATTAGTTCAAGTGGGTTAGT+TGG - chr8_2:14568532-14568551 Msa1236100:intron 35.0%
! GGATAATTTTTGTCCTCAAC+TGG - chr8_2:14568562-14568581 Msa1236100:intron 35.0%
! CCTCTGCATTTTATCAAAGT+CGG - chr8_2:14568654-14568673 Msa1236100:intron 35.0%
!! ATGCACAATTTCTAGTGACT+TGG - chr8_2:14568710-14568729 Msa1236100:intron 35.0%
!! TGCACAATTTCTAGTGACTT+GGG - chr8_2:14568711-14568730 Msa1236100:intron 35.0%
! GTTTTCAAAGTAACAGGTTG+TGG + chr8_2:14568818-14568837 None:intergenic 35.0%
! GGTACAGTCCTTTTCAAATT+AGG + chr8_2:14568840-14568859 None:intergenic 35.0%
TTTAGGAAAGGTTAGGAACT+CGG - chr8_2:14568928-14568947 Msa1236100:intron 35.0%
TAATGTGACCCTCTTAAGTA+AGG - chr8_2:14569028-14569047 Msa1236100:intron 35.0%
AATGTGACCCTCTTAAGTAA+GGG - chr8_2:14569029-14569048 Msa1236100:intron 35.0%
AGAAAAGATCAGCTATTCTC+AGG - chr8_2:14569496-14569515 Msa1236100:intron 35.0%
AAGAAAGATATAGGAGAAGC+AGG - chr8_2:14569591-14569610 Msa1236100:intron 35.0%
AATTCCTATGCAAGAACCTA+AGG - chr8_2:14569769-14569788 Msa1236100:intron 35.0%
CGTTATTGCACTATAGACTT+AGG - chr8_2:14569868-14569887 Msa1236100:intron 35.0%
!! GTAGGAGTCTTGTTTCTTTA+AGG - chr8_2:14570067-14570086 Msa1236100:intron 35.0%
TATAGAGTATGATCATCCAC+TGG + chr8_2:14570110-14570129 None:intergenic 35.0%
GATCATACTCTATAACCACT+TGG - chr8_2:14570116-14570135 Msa1236100:intron 35.0%
TCATACTCTATAACCACTTG+GGG - chr8_2:14570118-14570137 Msa1236100:intron 35.0%
ACAACATTAACCACTGTAGT+GGG + chr8_2:14570154-14570173 None:intergenic 35.0%
TACAACATTAACCACTGTAG+TGG + chr8_2:14570155-14570174 None:intergenic 35.0%
TAATGTACCCTCCTTTACAA+TGG - chr8_2:14570200-14570219 Msa1236100:intron 35.0%
AATGTACCCTCCTTTACAAT+GGG - chr8_2:14570201-14570220 Msa1236100:intron 35.0%
AATGTTACATGCAAAAGTGG+GGG + chr8_2:14570257-14570276 None:intergenic 35.0%
TGAAACAGCATTAATGGAGA+TGG - chr8_2:14570319-14570338 Msa1236100:intron 35.0%
ATTAATGGAGATGGTTAAGC+AGG - chr8_2:14570328-14570347 Msa1236100:intron 35.0%
TTATTCTTCAAATTGGGGCA+TGG + chr8_2:14570689-14570708 None:intergenic 35.0%
ATGCACCAATATGCCAAAAT+TGG - chr8_2:14570831-14570850 Msa1236100:intron 35.0%
ACTTAAACTAATCTGCATCC+TGG + chr8_2:14570970-14570989 None:intergenic 35.0%
ATTTCTGATAGGTCTTGATG+CGG - chr8_2:14571266-14571285 Msa1236100:intron 35.0%
AATTGATATGCTTGCGTTTG+AGG + chr8_2:14571436-14571455 None:intergenic 35.0%
ACACTTGTCTTGATAAGATG+TGG - chr8_2:14571458-14571477 Msa1236100:intron 35.0%
TGTAGTTGGGACAATTACTT+TGG - chr8_2:14571512-14571531 Msa1236100:CDS 35.0%
TACAATACAACGACACTCAA+AGG + chr8_2:14571645-14571664 None:intergenic 35.0%
TACTGGAATCCCTACATTAA+GGG - chr8_2:14571706-14571725 Msa1236100:intron 35.0%
AAGGGTCATCAACATTAATG+TGG + chr8_2:14571744-14571763 None:intergenic 35.0%
! GGAAGCATAAAGCATTAACA+GGG + chr8_2:14571895-14571914 None:intergenic 35.0%
! AGGAAGCATAAAGCATTAAC+AGG + chr8_2:14571896-14571915 None:intergenic 35.0%
TGAACACTTAAAACATACCG+TGG + chr8_2:14572130-14572149 None:intergenic 35.0%
!!! TGTGAACCCCCAAATTTTTT+TGG - chr8_2:14572172-14572191 Msa1236100:CDS 35.0%
!!! GTGAACCCCCAAATTTTTTT+GGG - chr8_2:14572173-14572192 Msa1236100:CDS 35.0%
GCTTACTAGATACTGAATGT+TGG + chr8_2:14572241-14572260 None:intergenic 35.0%
TCAACCATGTTAAGGTTTAG+GGG + chr8_2:14572287-14572306 None:intergenic 35.0%
CTCAACCATGTTAAGGTTTA+GGG + chr8_2:14572288-14572307 None:intergenic 35.0%
ACTCAACCATGTTAAGGTTT+AGG + chr8_2:14572289-14572308 None:intergenic 35.0%
AAGACAAGGTCATCTATAGA+GGG + chr8_2:14572423-14572442 None:intergenic 35.0%
AAAGACAAGGTCATCTATAG+AGG + chr8_2:14572424-14572443 None:intergenic 35.0%
!! TCTTGATTGTTTCTAGATCC+GGG + chr8_2:14572485-14572504 None:intergenic 35.0%
!! CTCTTGATTGTTTCTAGATC+CGG + chr8_2:14572486-14572505 None:intergenic 35.0%
CGTTAAAGTACAAGATGAGT+TGG - chr8_2:14572750-14572769 Msa1236100:CDS 35.0%
!!! GTTTTTTTTCTTCTGGTGGT+TGG - chr8_2:14573735-14573754 Msa1236100:CDS 35.0%
!!! TTTTTTTCTTCTGGTGGTTG+GGG - chr8_2:14573737-14573756 Msa1236100:CDS 35.0%
GACAACGCATAATATATGCA+AGG + chr8_2:14573776-14573795 None:intergenic 35.0%
AAATAACGAGAGCTACAATG+TGG + chr8_2:14573836-14573855 None:intergenic 35.0%
!!! TGCGAGTCTTGTTCATTTTG+TGG + chr8_2:14564846-14564865 None:intergenic 40.0%
TGTAAATGCTAGCGTACTCA+CGG + chr8_2:14565322-14565341 None:intergenic 40.0%
TGAGTACGCTAGCATTTACA+AGG - chr8_2:14565322-14565341 Msa1236100:three_prime_UTR 40.0%
AATGTGGCAAGGATATGGAA+TGG + chr8_2:14565363-14565382 None:intergenic 40.0%
CACAAAAGAAGTGGGAAATC+AGG + chr8_2:14565501-14565520 None:intergenic 40.0%
!! TACTTTTCAGGAGGAAGAAG+AGG - chr8_2:14565532-14565551 Msa1236100:three_prime_UTR 40.0%
TAAAAAAGACTTCCACCGCT+CGG + chr8_2:14565564-14565583 None:intergenic 40.0%
CAATACAGAAGACTCTGTCT+CGG + chr8_2:14565597-14565616 None:intergenic 40.0%
TAGTCAAAAGGAGGAGTTAC+CGG - chr8_2:14565751-14565770 Msa1236100:three_prime_UTR 40.0%
! ATCATCAAAAGGAGCATGTG+AGG - chr8_2:14565970-14565989 Msa1236100:intron 40.0%
AGGAGTTCTATGATGTTGAG+AGG - chr8_2:14566005-14566024 Msa1236100:intron 40.0%
!! CAAGAGGAGTATCTAGACTA+GGG + chr8_2:14566036-14566055 None:intergenic 40.0%
!! ACAAGAGGAGTATCTAGACT+AGG + chr8_2:14566037-14566056 None:intergenic 40.0%
CTAGATACTCCTCTTGTTGA+TGG - chr8_2:14566040-14566059 Msa1236100:CDS 40.0%
! AGCAGCAATACCATTTGTTG+AGG + chr8_2:14566074-14566093 None:intergenic 40.0%
ACTTCCAACTCTTCTTTCCA+AGG + chr8_2:14566124-14566143 None:intergenic 40.0%
AGTTGGAAGTTCTTGTTCGT+GGG - chr8_2:14566134-14566153 Msa1236100:intron 40.0%
AATTCCAGAATCACCATTGG+AGG + chr8_2:14566351-14566370 None:intergenic 40.0%
GGCAGTTAGATGACAATGAT+GGG - chr8_2:14566390-14566409 Msa1236100:intron 40.0%
ATGGAAAGGACAGATTGAGA+AGG - chr8_2:14566448-14566467 Msa1236100:intron 40.0%
!!! CAGGCCATGAATTTTTTTGC+TGG - chr8_2:14566801-14566820 Msa1236100:intron 40.0%
!!! ATTGTTGCTTTTGATGCCTG+AGG - chr8_2:14566827-14566846 Msa1236100:intron 40.0%
!!! TACCAAAAGGCATTTTCCTC+AGG + chr8_2:14566846-14566865 None:intergenic 40.0%
! TGAGGAAAATGCCTTTTGGT+AGG - chr8_2:14566845-14566864 Msa1236100:intron 40.0%
!!! GTTTTTTGTCAGGACCTTGA+TGG - chr8_2:14567058-14567077 Msa1236100:intron 40.0%
AGAGGATATGATAGAGTCTC+AGG - chr8_2:14567115-14567134 Msa1236100:intron 40.0%
!!! TGTTTTTGAAGAGTTGGTGC+GGG - chr8_2:14567252-14567271 Msa1236100:CDS 40.0%
TTCATGTCTTTGAACTCACC+AGG - chr8_2:14567317-14567336 Msa1236100:intron 40.0%
CACTAAAAACAAACTTCGCC+TGG + chr8_2:14567338-14567357 None:intergenic 40.0%
GAATACAAGCGCTCATTTGA+AGG + chr8_2:14567547-14567566 None:intergenic 40.0%
! TGGGATGTGCTTCTTTTTGA+AGG - chr8_2:14567625-14567644 Msa1236100:intron 40.0%
!! AGCATCCTTTGTTGTTACCA+AGG + chr8_2:14567805-14567824 None:intergenic 40.0%
! TTGGTAACAACAAAGGATGC+TGG - chr8_2:14567804-14567823 Msa1236100:intron 40.0%
AAGCTGACTGCTATCAAATG+TGG + chr8_2:14567865-14567884 None:intergenic 40.0%
!!! CTTGTTTTGACAGCTTGCAT+GGG - chr8_2:14567882-14567901 Msa1236100:intron 40.0%
AGGAGCTGAGGAATAAACAT+AGG - chr8_2:14567934-14567953 Msa1236100:intron 40.0%
TCAATTGCAGCTATTACAGC+TGG + chr8_2:14567960-14567979 None:intergenic 40.0%
CAAAAGGGCTTAAAGCTTTG+AGG - chr8_2:14567988-14568007 Msa1236100:intron 40.0%
!! TAAAGCTTTGAGGGATGCTA+AGG - chr8_2:14567998-14568017 Msa1236100:intron 40.0%
!! AAAGCTTTGAGGGATGCTAA+GGG - chr8_2:14567999-14568018 Msa1236100:intron 40.0%
TGTAGAACCAGATTCTGTAC+GGG + chr8_2:14568081-14568100 None:intergenic 40.0%
TTCACGTTCTAACAACAGGA+GGG + chr8_2:14568208-14568227 None:intergenic 40.0%
CAACTTCACGTTCTAACAAC+AGG + chr8_2:14568212-14568231 None:intergenic 40.0%
GCCTCTATGTTTATCAGAGT+TGG - chr8_2:14568491-14568510 Msa1236100:intron 40.0%
CCCAACTCTGATAAACATAG+AGG + chr8_2:14568495-14568514 None:intergenic 40.0%
CCGACTTTGATAAAATGCAG+AGG + chr8_2:14568657-14568676 None:intergenic 40.0%
! ATCAAAGTCGGACAGTGTTT+TGG - chr8_2:14568666-14568685 Msa1236100:intron 40.0%
CATCTTACATCAATGTCGCA+TGG + chr8_2:14568747-14568766 None:intergenic 40.0%
GCGACATTGATGTAAGATGT+TGG - chr8_2:14568748-14568767 Msa1236100:intron 40.0%
AAGGACTGTACCAGAAAACT+AGG - chr8_2:14568848-14568867 Msa1236100:intron 40.0%
!! TTCGCATTGTCCTAGTTTTC+TGG + chr8_2:14568861-14568880 None:intergenic 40.0%
GAAACCACCCTTACTTAAGA+GGG + chr8_2:14569039-14569058 None:intergenic 40.0%
TGAAACCACCCTTACTTAAG+AGG + chr8_2:14569040-14569059 None:intergenic 40.0%
ATAAGATCAATACCACGTCG+TGG + chr8_2:14569418-14569437 None:intergenic 40.0%
CTCACTTTATGCAGATTGCA+TGG - chr8_2:14569442-14569461 Msa1236100:intron 40.0%
ATATAGGAGAAGCAGGAATG+TGG - chr8_2:14569598-14569617 Msa1236100:intron 40.0%
AGCAGGAATGTGGTAGAAAT+TGG - chr8_2:14569608-14569627 Msa1236100:intron 40.0%
TTGCACTATAGACTTAGGCT+TGG - chr8_2:14569873-14569892 Msa1236100:intron 40.0%
TTGTCCACTCAACTTTAGTC+TGG + chr8_2:14569910-14569929 None:intergenic 40.0%
AAACAAGACTCCTACACCAA+TGG + chr8_2:14570062-14570081 None:intergenic 40.0%
GTTTGTATCTGAAAGTCCAG+TGG - chr8_2:14570091-14570110 Msa1236100:intron 40.0%
CATACTCTATAACCACTTGG+GGG - chr8_2:14570119-14570138 Msa1236100:intron 40.0%
!! ATTAACCACTGTAGTGGGTA+GGG + chr8_2:14570149-14570168 None:intergenic 40.0%
GATACTCCCATTGTAAAGGA+GGG + chr8_2:14570210-14570229 None:intergenic 40.0%
TGATACTCCCATTGTAAAGG+AGG + chr8_2:14570211-14570230 None:intergenic 40.0%
GGAGCTTGAAACAGCATTAA+TGG - chr8_2:14570313-14570332 Msa1236100:intron 40.0%
CTCATTGTACTGCAAATAGG+AGG - chr8_2:14570460-14570479 Msa1236100:CDS 40.0%
GTGGGAAAGAAGCAAAGTAA+AGG + chr8_2:14570561-14570580 None:intergenic 40.0%
CATAAACTGCCAATCAACCA+TGG - chr8_2:14570650-14570669 Msa1236100:CDS 40.0%
CGATTTGTCAGAATCTCACT+AGG - chr8_2:14570754-14570773 Msa1236100:CDS 40.0%
ATCATATTTGCCACAAGCAC+AGG + chr8_2:14570794-14570813 None:intergenic 40.0%
!! TAGTAACTGTGCTTTGAAGG+TGG + chr8_2:14570946-14570965 None:intergenic 40.0%
GGATAGTAACTGTGCTTTGA+AGG + chr8_2:14570949-14570968 None:intergenic 40.0%
TCAAAGCACAGTTACTATCC+AGG - chr8_2:14570949-14570968 Msa1236100:CDS 40.0%
TTTCTGATAGGTCTTGATGC+GGG - chr8_2:14571267-14571286 Msa1236100:intron 40.0%
GCAAGAACAAAAGGTTACAG+AGG - chr8_2:14571294-14571313 Msa1236100:intron 40.0%
AAAAGGTTACAGAGGATGCT+CGG - chr8_2:14571302-14571321 Msa1236100:intron 40.0%
! AAAGGTAACCTGAAGCACTT+GGG + chr8_2:14571368-14571387 None:intergenic 40.0%
! AAAAGGTAACCTGAAGCACT+TGG + chr8_2:14571369-14571388 None:intergenic 40.0%
TGATAAGATGTGGTGCTTTC+AGG - chr8_2:14571468-14571487 Msa1236100:intron 40.0%
ACGACACTCAAAGGAAAGAA+TGG + chr8_2:14571636-14571655 None:intergenic 40.0%
! TGAGTGTCGTTGTATTGTAG+TGG - chr8_2:14571646-14571665 Msa1236100:intron 40.0%
TATTCTGCCATAGGTTGTAC+TGG - chr8_2:14571689-14571708 Msa1236100:intron 40.0%
GTACTGGAATCCCTACATTA+AGG - chr8_2:14571705-14571724 Msa1236100:intron 40.0%
AACTGTTGCACTTGCAGAAA+TGG - chr8_2:14572024-14572043 Msa1236100:intron 40.0%
AATGGAGAAGAGAGCAGTTA+TGG - chr8_2:14572042-14572061 Msa1236100:intron 40.0%
GAGATGGTTGCAGTTTAGTT+TGG + chr8_2:14572108-14572127 None:intergenic 40.0%
CTTAAAACATACCGTGGAGA+TGG + chr8_2:14572124-14572143 None:intergenic 40.0%
CTAGTAAGCACCACAAATAG+TGG - chr8_2:14572252-14572271 Msa1236100:CDS 40.0%
GACGGTTTAACCACTATTTG+TGG + chr8_2:14572265-14572284 None:intergenic 40.0%
TTGCTGGAGAAATATCGGAA+AGG - chr8_2:14572358-14572377 Msa1236100:intron 40.0%
AAACAATCAAGAGCCTACGA+TGG - chr8_2:14572493-14572512 Msa1236100:CDS 40.0%
AGAAAGCAAACTTATCCTCC+TGG + chr8_2:14572528-14572547 None:intergenic 40.0%
! AGTTTGCTTTCTCGACCATT+TGG - chr8_2:14572536-14572555 Msa1236100:CDS 40.0%
ATAGGGGAAACCTACTAATG+TGG - chr8_2:14572678-14572697 Msa1236100:CDS 40.0%
!! TTCCCTCATGTTGACTTACA+GGG + chr8_2:14572726-14572745 None:intergenic 40.0%
!! TTTCCCTCATGTTGACTTAC+AGG + chr8_2:14572727-14572746 None:intergenic 40.0%
GTAAGTCAACATGAGGGAAA+TGG - chr8_2:14572727-14572746 Msa1236100:CDS 40.0%
AAATTAGTGTGAGGACTCGA+GGG - chr8_2:14573559-14573578 Msa1236100:intron 40.0%
AGGTCGCACAGTAAATCCAT+AGG + chr8_2:14565282-14565301 None:intergenic 45.0%
GGCAAGGATATGGAATGGAA+TGG + chr8_2:14565358-14565377 None:intergenic 45.0%
TTCAGGAGGAAGAAGAGGAA+AGG - chr8_2:14565537-14565556 Msa1236100:three_prime_UTR 45.0%
CGAGACAGAGTCTTCTGTAT+TGG - chr8_2:14565595-14565614 Msa1236100:three_prime_UTR 45.0%
GACACAAACAGAACACCTGT+GGG - chr8_2:14565617-14565636 Msa1236100:three_prime_UTR 45.0%
ACACAAACAGAACACCTGTG+GGG - chr8_2:14565618-14565637 Msa1236100:three_prime_UTR 45.0%
GGGGAAGAGAACAAAGTTTC+TGG - chr8_2:14565638-14565657 Msa1236100:three_prime_UTR 45.0%
!! GTTTCTGGTGCTGAATCTGT+AGG - chr8_2:14565653-14565672 Msa1236100:three_prime_UTR 45.0%
GCTGATACTCCACCTGAAAA+TGG - chr8_2:14565728-14565747 Msa1236100:three_prime_UTR 45.0%
AGGTGTGGTAAAAGATGAGC+TGG - chr8_2:14565907-14565926 Msa1236100:CDS 45.0%
GAGTCACTATCTCTTGCTGA+TGG - chr8_2:14565941-14565960 Msa1236100:intron 45.0%
ATGTGAGGAAGATTCTGACG+AGG - chr8_2:14565985-14566004 Msa1236100:intron 45.0%
GTACTCAAGCCATCAACAAG+AGG + chr8_2:14566052-14566071 None:intergenic 45.0%
GGCTTGAGTACCTCAACAAA+TGG - chr8_2:14566061-14566080 Msa1236100:CDS 45.0%
GTGTCCTTGGAAAGAAGAGT+TGG - chr8_2:14566117-14566136 Msa1236100:CDS 45.0%
GAGTTGGAAGTTCTTGTTCG+TGG - chr8_2:14566133-14566152 Msa1236100:intron 45.0%
GTTGGAAGTTCTTGTTCGTG+GGG - chr8_2:14566135-14566154 Msa1236100:intron 45.0%
TTGGAAGTTCTTGTTCGTGG+GGG - chr8_2:14566136-14566155 Msa1236100:intron 45.0%
!!! TTAGCTCTGGCAAGCTTTTG+TGG - chr8_2:14566280-14566299 Msa1236100:intron 45.0%
!!! TAGCTCTGGCAAGCTTTTGT+GGG - chr8_2:14566281-14566300 Msa1236100:intron 45.0%
! CTTTTGTGGGTGTCAAAGCA+AGG - chr8_2:14566294-14566313 Msa1236100:intron 45.0%
!! GCGGGTAGAGAAGTATTATC+AGG - chr8_2:14566316-14566335 Msa1236100:intron 45.0%
GGGCAGTTAGATGACAATGA+TGG - chr8_2:14566389-14566408 Msa1236100:intron 45.0%
TCATAGCATCATGAGCTACG+AGG + chr8_2:14566494-14566513 None:intergenic 45.0%
ACCTGACAGTAACCAACAGA+GGG + chr8_2:14566677-14566696 None:intergenic 45.0%
GTTGGTTACTGTCAGGTCTT+TGG - chr8_2:14566680-14566699 Msa1236100:intron 45.0%
! TGCCTGAGGAAAATGCCTTT+TGG - chr8_2:14566841-14566860 Msa1236100:intron 45.0%
CCATTCCTTCATGACAGCAA+CGG + chr8_2:14566982-14567001 None:intergenic 45.0%
! TCTAGATTATCTGGGAGTGC+AGG - chr8_2:14567409-14567428 Msa1236100:intron 45.0%
AACATGCTTCCTTGGGAAAG+TGG - chr8_2:14567473-14567492 Msa1236100:CDS 45.0%
AAAACCTGACCACTTTCCCA+AGG + chr8_2:14567485-14567504 None:intergenic 45.0%
TACTTCAGTGCTTCGAGTGT+GGG - chr8_2:14567606-14567625 Msa1236100:intron 45.0%
! TCCAGCCTTGGTAACAACAA+AGG - chr8_2:14567797-14567816 Msa1236100:intron 45.0%
!! TCCTTTGTTGTTACCAAGGC+TGG + chr8_2:14567801-14567820 None:intergenic 45.0%
ACTGCTATCAAATGTGGAGC+CGG + chr8_2:14567859-14567878 None:intergenic 45.0%
!!! GCTTGTTTTGACAGCTTGCA+TGG - chr8_2:14567881-14567900 Msa1236100:intron 45.0%
TCGAATAATGCGCAAGTGCT+TGG - chr8_2:14568047-14568066 Msa1236100:intron 45.0%
CGAATAATGCGCAAGTGCTT+GGG - chr8_2:14568048-14568067 Msa1236100:intron 45.0%
!! TTAACCTGCTCTGGAAGATC+TGG + chr8_2:14568158-14568177 None:intergenic 45.0%
AAGACGGAATTAACCTGCTC+TGG + chr8_2:14568167-14568186 None:intergenic 45.0%
TCACGTTCTAACAACAGGAG+GGG + chr8_2:14568207-14568226 None:intergenic 45.0%
CTTCACGTTCTAACAACAGG+AGG + chr8_2:14568209-14568228 None:intergenic 45.0%
! ATCAGAGTTGGGCAGTGTTT+TGG - chr8_2:14568503-14568522 Msa1236100:intron 45.0%
GTGTCCTTAGGTTCTTGCAT+AGG + chr8_2:14569776-14569795 None:intergenic 45.0%
GACTCCAGACTAAAGTTGAG+TGG - chr8_2:14569903-14569922 Msa1236100:intron 45.0%
AATGTTGATGTACTGGGCAG+TGG - chr8_2:14569966-14569985 Msa1236100:intron 45.0%
ACATTTGAAGAGCTTGGGCA+TGG - chr8_2:14570036-14570055 Msa1236100:intron 45.0%
!! CATTAACCACTGTAGTGGGT+AGG + chr8_2:14570150-14570169 None:intergenic 45.0%
AGATGGTTAAGCAGGACAAC+AGG - chr8_2:14570336-14570355 Msa1236100:intron 45.0%
GCACGAAGCAAAATCCATTC+TGG + chr8_2:14570393-14570412 None:intergenic 45.0%
TTGCCTCCTCAGATAGATTG+TGG - chr8_2:14570531-14570550 Msa1236100:CDS 45.0%
AGATGAAGTCTTCCCACAAC+AGG + chr8_2:14570624-14570643 None:intergenic 45.0%
TATTGCTAGACCTGTGCTTG+TGG - chr8_2:14570781-14570800 Msa1236100:CDS 45.0%
ACAGGAAACTGCAATGCTTC+AGG - chr8_2:14571172-14571191 Msa1236100:CDS 45.0%
ATATGCTTCCCAAGTGCTTC+AGG - chr8_2:14571357-14571376 Msa1236100:intron 45.0%
! GCGTTTGAGGTAGATACTGA+TGG + chr8_2:14571423-14571442 None:intergenic 45.0%
GTCGTTGTATTGTAGTGGTG+TGG - chr8_2:14571651-14571670 Msa1236100:intron 45.0%
AGGGATTCCAGTACAACCTA+TGG + chr8_2:14571699-14571718 None:intergenic 45.0%
TGCAACTCGTGTGATGATAG+AGG + chr8_2:14571804-14571823 None:intergenic 45.0%
AGTTATGGCTGAGTCTATGC+TGG - chr8_2:14572057-14572076 Msa1236100:intron 45.0%
! GCTACTTTGCAGTATCAGTC+TGG - chr8_2:14572082-14572101 Msa1236100:intron 45.0%
CTAAACTGCAACCATCTCCA+CGG - chr8_2:14572110-14572129 Msa1236100:intron 45.0%
TTGGGGGTTCACATGCATTT+AGG + chr8_2:14572165-14572184 None:intergenic 45.0%
CCATGTTAAGGTTTAGGGGA+CGG + chr8_2:14572283-14572302 None:intergenic 45.0%
TGGGGAACTCAACCATGTTA+AGG + chr8_2:14572295-14572314 None:intergenic 45.0%
AGCAAGACGGCAAAAAGACA+AGG + chr8_2:14572437-14572456 None:intergenic 45.0%
TTTCTAGATCCGGGAGATTC+TGG + chr8_2:14572476-14572495 None:intergenic 45.0%
CAAACTTATCCTCCTGGTAG+GGG + chr8_2:14572522-14572541 None:intergenic 45.0%
GCAAACTTATCCTCCTGGTA+GGG + chr8_2:14572523-14572542 None:intergenic 45.0%
AGCAAACTTATCCTCCTGGT+AGG + chr8_2:14572524-14572543 None:intergenic 45.0%
CTTTCTCGACCATTTGGACT+TGG - chr8_2:14572542-14572561 Msa1236100:CDS 45.0%
TCGACCATTTGGACTTGGAT+GGG - chr8_2:14572547-14572566 Msa1236100:CDS 45.0%
! GCTGGTTCTTCCACATTAGT+AGG + chr8_2:14572691-14572710 None:intergenic 45.0%
AAGCCCTGTAAGTCAACATG+AGG - chr8_2:14572720-14572739 Msa1236100:CDS 45.0%
AGCCCTGTAAGTCAACATGA+GGG - chr8_2:14572721-14572740 Msa1236100:CDS 45.0%
CAAATTAGTGTGAGGACTCG+AGG - chr8_2:14573558-14573577 Msa1236100:intron 45.0%
CATGCTAAGAGCAACTCCAA+CGG - chr8_2:14573665-14573684 Msa1236100:intron 45.0%
ATGCTAAGAGCAACTCCAAC+GGG - chr8_2:14573666-14573685 Msa1236100:intron 45.0%
!! AAGAAATTAATAATTAATTA+TGG + chr8_2:14567363-14567382 None:intergenic 5.0%
GCACATGCACACTCATCAAG+CGG + chr8_2:14564722-14564741 None:intergenic 50.0%
TGTGTCAACAGGGATGCCTA+TGG - chr8_2:14565263-14565282 Msa1236100:three_prime_UTR 50.0%
! CGGTATCTTTGCAGGTGTTG+AGG + chr8_2:14565302-14565321 None:intergenic 50.0%
CGTACTCACGGTATCTTTGC+AGG + chr8_2:14565310-14565329 None:intergenic 50.0%
AAGAAGAGGAAAGGTCCGAG+CGG - chr8_2:14565546-14565565 Msa1236100:three_prime_UTR 50.0%
GGACACAAACAGAACACCTG+TGG - chr8_2:14565616-14565635 Msa1236100:three_prime_UTR 50.0%
CACAAACAGAACACCTGTGG+GGG - chr8_2:14565619-14565638 Msa1236100:three_prime_UTR 50.0%
ACTTTGTTCTCTTCCCCCAC+AGG + chr8_2:14565635-14565654 None:intergenic 50.0%
ACCTGATGCTAGCTCAGAGA+AGG - chr8_2:14565682-14565701 Msa1236100:three_prime_UTR 50.0%
CCTGATGCTAGCTCAGAGAA+GGG - chr8_2:14565683-14565702 Msa1236100:three_prime_UTR 50.0%
!! AGCTCAGAGAAGGGTGTTGA+TGG - chr8_2:14565692-14565711 Msa1236100:three_prime_UTR 50.0%
!! GCTCAGAGAAGGGTGTTGAT+GGG - chr8_2:14565693-14565712 Msa1236100:three_prime_UTR 50.0%
ATTCTAGTCTCCTCGGATGC+CGG + chr8_2:14565773-14565792 None:intergenic 50.0%
TTGTGGGTGTCAAAGCAAGG+CGG - chr8_2:14566297-14566316 Msa1236100:intron 50.0%
! GAGGTGAAGTGTCACAGGTA+CGG + chr8_2:14566475-14566494 None:intergenic 50.0%
ATTTCCTGGTCACCCTGCTT+TGG - chr8_2:14566595-14566614 Msa1236100:intron 50.0%
TACCATCCTCGTCCAAAGCA+GGG + chr8_2:14566610-14566629 None:intergenic 50.0%
GCTCGACATAATCCCTCTGT+TGG - chr8_2:14566662-14566681 Msa1236100:intron 50.0%
! TCCCTCTGTTGGTTACTGTC+AGG - chr8_2:14566673-14566692 Msa1236100:intron 50.0%
GACCTGACAGTAACCAACAG+AGG + chr8_2:14566678-14566697 None:intergenic 50.0%
CCGTTGCTGTCATGAAGGAA+TGG - chr8_2:14566979-14566998 Msa1236100:intron 50.0%
CGGGAGAGGTTTCCCAAATT+GGG - chr8_2:14567271-14567290 Msa1236100:CDS 50.0%
GTACTTCAGTGCTTCGAGTG+TGG - chr8_2:14567605-14567624 Msa1236100:intron 50.0%
AAGGCTGGACCTACAAGACA+TGG + chr8_2:14567786-14567805 None:intergenic 50.0%
ATGTCTTGTAGGTCCAGCCT+TGG - chr8_2:14567785-14567804 Msa1236100:intron 50.0%
AAGTTCGATTGCAGGAGCTG+AGG - chr8_2:14567922-14567941 Msa1236100:intron 50.0%
TTTGAGGGATGCTAAGGGTC+TGG - chr8_2:14568004-14568023 Msa1236100:intron 50.0%
GGCGGGGATAAAAGGAAAGA+CGG + chr8_2:14568183-14568202 None:intergenic 50.0%
ACGTTCTAACAACAGGAGGG+GGG + chr8_2:14568205-14568224 None:intergenic 50.0%
CACGTTCTAACAACAGGAGG+GGG + chr8_2:14568206-14568225 None:intergenic 50.0%
!! AGTGGGTTAGTTGGCTGTTG+AGG - chr8_2:14568541-14568560 Msa1236100:intron 50.0%
TTGAGGTGAAGGACCAGTTG+AGG + chr8_2:14568578-14568597 None:intergenic 50.0%
GTGACCCTCTTAAGTAAGGG+TGG - chr8_2:14569032-14569051 Msa1236100:intron 50.0%
GAAAGCAACTAACCACGACG+TGG - chr8_2:14569403-14569422 Msa1236100:intron 50.0%
TCTCACTTGGCCTGGAAACA+GGG - chr8_2:14569807-14569826 Msa1236100:intron 50.0%
TAGACTTAGGCTTGGCAGTC+TGG - chr8_2:14569881-14569900 Msa1236100:intron 50.0%
GATTACCCTACCCACTACAG+TGG - chr8_2:14570141-14570160 Msa1236100:intron 50.0%
! CTTCCCTTTTACCAGAGCAG+AGG - chr8_2:14570292-14570311 Msa1236100:intron 50.0%
GCTCCTCTGCTCTGGTAAAA+GGG + chr8_2:14570298-14570317 None:intergenic 50.0%
AGCTCCTCTGCTCTGGTAAA+AGG + chr8_2:14570299-14570318 None:intergenic 50.0%
TGTTTCAAGCTCCTCTGCTC+TGG + chr8_2:14570306-14570325 None:intergenic 50.0%
TGGTTAAGCAGGACAACAGG+CGG - chr8_2:14570339-14570358 Msa1236100:intron 50.0%
!! TCTGGACTAGTGCCTTACCT+TGG + chr8_2:14570375-14570394 None:intergenic 50.0%
! GGTAAGGCACTAGTCCAGAA+TGG - chr8_2:14570376-14570395 Msa1236100:intron 50.0%
TGAGAAAGCAGCAGATGCAG+AGG + chr8_2:14570444-14570463 None:intergenic 50.0%
TCGCCACAATCTATCTGAGG+AGG + chr8_2:14570537-14570556 None:intergenic 50.0%
GGTTCGCCACAATCTATCTG+AGG + chr8_2:14570540-14570559 None:intergenic 50.0%
TCTCAACCGATAGCCTGTTG+TGG - chr8_2:14570608-14570627 Msa1236100:CDS 50.0%
CTCAACCGATAGCCTGTTGT+GGG - chr8_2:14570609-14570628 Msa1236100:CDS 50.0%
GTCTTCCCACAACAGGCTAT+CGG + chr8_2:14570617-14570636 None:intergenic 50.0%
CTTCTTCTAGTCGCTCTACC+TGG + chr8_2:14571112-14571131 None:intergenic 50.0%
GGTAGAGCGACTAGAAGAAG+AGG - chr8_2:14571112-14571131 Msa1236100:CDS 50.0%
GCGGGTAGAGCAAGAACAAA+AGG - chr8_2:14571285-14571304 Msa1236100:intron 50.0%
CCGTCCCCTAAACCTTAACA+TGG - chr8_2:14572280-14572299 Msa1236100:CDS 50.0%
TCTTCACAGCCAGAATCTCC+CGG - chr8_2:14572464-14572483 Msa1236100:CDS 50.0%
CTCGACCATTTGGACTTGGA+TGG - chr8_2:14572546-14572565 Msa1236100:CDS 50.0%
CGACCATTTGGACTTGGATG+GGG - chr8_2:14572548-14572567 Msa1236100:CDS 50.0%
TCACCCCATCCAAGTCCAAA+TGG + chr8_2:14572554-14572573 None:intergenic 50.0%
TGGATGGGGTGATCGAAACA+AGG - chr8_2:14572562-14572581 Msa1236100:CDS 50.0%
ACAGGGCTTTCTACTACAGC+TGG + chr8_2:14572709-14572728 None:intergenic 50.0%
TCTTGCTCCTCAAACCGTCT+GGG + chr8_2:14572811-14572830 None:intergenic 50.0%
TTCTTGCTCCTCAAACCGTC+TGG + chr8_2:14572812-14572831 None:intergenic 50.0%
CTTCAAGCTAACAGACCCGT+TGG + chr8_2:14573684-14573703 None:intergenic 50.0%
TGGGACTGTGTGAGCGAGAA+TGG + chr8_2:14564697-14564716 None:intergenic 55.0%
GCACACTCATCAAGCGGTGT+GGG + chr8_2:14564716-14564735 None:intergenic 55.0%
TGCACACTCATCAAGCGGTG+TGG + chr8_2:14564717-14564736 None:intergenic 55.0%
CCCTTCTCTGAGCTAGCATC+AGG + chr8_2:14565686-14565705 None:intergenic 55.0%
CAAGGACACGAAGCCTCTAG+TGG + chr8_2:14566106-14566125 None:intergenic 55.0%
CACTAGAGGCTTCGTGTCCT+TGG - chr8_2:14566104-14566123 Msa1236100:CDS 55.0%
TGTTCGTGGGGGAGTTCCAA+TGG - chr8_2:14566147-14566166 Msa1236100:intron 55.0%
! GGGAGTTCCAATGGCACTGA+GGG - chr8_2:14566156-14566175 Msa1236100:intron 55.0%
! GGAGTTCCAATGGCACTGAG+GGG - chr8_2:14566157-14566176 Msa1236100:intron 55.0%
TGTGGGTGTCAAAGCAAGGC+GGG - chr8_2:14566298-14566317 Msa1236100:intron 55.0%
! CAGGATCTACTGGCCTCCAA+TGG - chr8_2:14566335-14566354 Msa1236100:intron 55.0%
CTGGCCTCCAATGGTGATTC+TGG - chr8_2:14566344-14566363 Msa1236100:intron 55.0%
! GCTACGAGGTGAAGTGTCAC+AGG + chr8_2:14566480-14566499 None:intergenic 55.0%
TGTTTGTGCAGGATCTGCCG+CGG - chr8_2:14566570-14566589 Msa1236100:CDS 55.0%
CTACCATCCTCGTCCAAAGC+AGG + chr8_2:14566611-14566630 None:intergenic 55.0%
CAGCAACGGTCGTCATATGC+AGG + chr8_2:14566968-14566987 None:intergenic 55.0%
GACGACCGTTGCTGTCATGA+AGG - chr8_2:14566974-14566993 Msa1236100:intron 55.0%
!! TTGAAGAGTTGGTGCGGGAG+AGG - chr8_2:14567257-14567276 Msa1236100:CDS 55.0%
GCGGGAGAGGTTTCCCAAAT+TGG - chr8_2:14567270-14567289 Msa1236100:CDS 55.0%
! ATCTGGGAGTGCAGGTTGCA+TGG - chr8_2:14567417-14567436 Msa1236100:intron 55.0%
! TCTGGGAGTGCAGGTTGCAT+GGG - chr8_2:14567418-14567437 Msa1236100:CDS 55.0%
TTGCATGGGTGACTGGACCA+TGG - chr8_2:14567432-14567451 Msa1236100:CDS 55.0%
GCTTCCTTGGGAAAGTGGTC+AGG - chr8_2:14567478-14567497 Msa1236100:CDS 55.0%
AGCTCCAGATCTTCCAGAGC+AGG - chr8_2:14568151-14568170 Msa1236100:intron 55.0%
CGTTCTAACAACAGGAGGGG+GGG + chr8_2:14568204-14568223 None:intergenic 55.0%
ACCTAAGGACACTCGAACCG+TGG - chr8_2:14569784-14569803 Msa1236100:intron 55.0%
ACCACGGTTCGAGTGTCCTT+AGG + chr8_2:14569788-14569807 None:intergenic 55.0%
ACTCGAACCGTGGTCTCACT+TGG - chr8_2:14569794-14569813 Msa1236100:intron 55.0%
TTCCAGGCCAAGTGAGACCA+CGG + chr8_2:14569804-14569823 None:intergenic 55.0%
GTCTCACTTGGCCTGGAAAC+AGG - chr8_2:14569806-14569825 Msa1236100:intron 55.0%
CTCACTTGGCCTGGAAACAG+GGG - chr8_2:14569808-14569827 Msa1236100:intron 55.0%
AAGAGCTTGGGCATGGCCAT+TGG - chr8_2:14570043-14570062 Msa1236100:intron 55.0%
TTGGGCATGGCCATTGGTGT+AGG - chr8_2:14570049-14570068 Msa1236100:intron 55.0%
GGTTAAGCAGGACAACAGGC+GGG - chr8_2:14570340-14570359 Msa1236100:intron 55.0%
!! CTGGTAGGGGTATCCATCGT+AGG + chr8_2:14572509-14572528 None:intergenic 55.0%
CTACGATGGATACCCCTACC+AGG - chr8_2:14572507-14572526 Msa1236100:CDS 55.0%
TCACTTTGCCCTTCCCCAGA+CGG - chr8_2:14572794-14572813 Msa1236100:CDS 55.0%
TCCTCAAACCGTCTGGGGAA+GGG + chr8_2:14572805-14572824 None:intergenic 55.0%
CTTGCTCCTCAAACCGTCTG+GGG + chr8_2:14572810-14572829 None:intergenic 55.0%
GGTGGTTGGGGTTTGAACTC+TGG - chr8_2:14573749-14573768 Msa1236100:exon 55.0%
AAGAGGAAAGGTCCGAGCGG+TGG - chr8_2:14565549-14565568 Msa1236100:three_prime_UTR 60.0%
TGCTGCTGCTGCACCACTAG+AGG - chr8_2:14566090-14566109 Msa1236100:CDS 60.0%
GGGGAGTTCCAATGGCACTG+AGG - chr8_2:14566155-14566174 Msa1236100:intron 60.0%
! TCCAATGGCACTGAGGGGAG+AGG - chr8_2:14566162-14566181 Msa1236100:intron 60.0%
ACCTCTCCCCTCAGTGCCAT+TGG + chr8_2:14566166-14566185 None:intergenic 60.0%
GATCTGCCGCGGACATTTCC+TGG - chr8_2:14566581-14566600 Msa1236100:CDS 60.0%
GGGTGACCAGGAAATGTCCG+CGG + chr8_2:14566590-14566609 None:intergenic 60.0%
TCGTCCAAAGCAGGGTGACC+AGG + chr8_2:14566602-14566621 None:intergenic 60.0%
! TGGTCACCCTGCTTTGGACG+AGG - chr8_2:14566601-14566620 Msa1236100:intron 60.0%
! CACCCTGCTTTGGACGAGGA+TGG - chr8_2:14566605-14566624 Msa1236100:intron 60.0%
GTGCAGGTTGCATGGGTGAC+TGG - chr8_2:14567425-14567444 Msa1236100:CDS 60.0%
TCTAACAACAGGAGGGGGGG+CGG + chr8_2:14568201-14568220 None:intergenic 60.0%
AACCGTGGTCTCACTTGGCC+TGG - chr8_2:14569799-14569818 Msa1236100:intron 60.0%
TCACGGAAGCCCCTGTTTCC+AGG + chr8_2:14569820-14569839 None:intergenic 60.0%
GGGTAGGGTAATCCCCCAAG+TGG + chr8_2:14570134-14570153 None:intergenic 60.0%
GGGAACTGAGCGCCAAGGTA+AGG - chr8_2:14570360-14570379 Msa1236100:intron 60.0%
CGATGGATACCCCTACCAGG+AGG - chr8_2:14572510-14572529 Msa1236100:CDS 60.0%
CTCCTCAAACCGTCTGGGGA+AGG + chr8_2:14572806-14572825 None:intergenic 60.0%
GGAGGAGTTACCGGCATCCG+AGG - chr8_2:14565760-14565779 Msa1236100:three_prime_UTR 65.0%
TAACAACAGGAGGGGGGGCG+GGG + chr8_2:14568199-14568218 None:intergenic 65.0%
CTAACAACAGGAGGGGGGGC+GGG + chr8_2:14568200-14568219 None:intergenic 65.0%
GCCCTTCCCCAGACGGTTTG+AGG - chr8_2:14572801-14572820 Msa1236100:CDS 65.0%
GGAGGGGGGGCGGGGATAAA+AGG + chr8_2:14568191-14568210 None:intergenic 70.0%
CAGGCGGGAACTGAGCGCCA+AGG - chr8_2:14570355-14570374 Msa1236100:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 14564679 14573932 14564679 ID=Msa1236100;Name=Msa1236100
chr8_2 mRNA 14564679 14573932 14564679 ID=Msa1236100-mRNA-1;Parent=Msa1236100;Name=Msa1236100-mRNA-1;_AED=0.08;_eAED=0.08;_QI=171|0.88|0.89|1|0.94|0.89|19|1115|827
chr8_2 exon 14564679 14564698 14564679 ID=Msa1236100-mRNA-1:exon:5616;Parent=Msa1236100-mRNA-1
chr8_2 exon 14564733 14565929 14564733 ID=Msa1236100-mRNA-1:exon:5615;Parent=Msa1236100-mRNA-1
chr8_2 exon 14566028 14566148 14566028 ID=Msa1236100-mRNA-1:exon:5614;Parent=Msa1236100-mRNA-1
chr8_2 exon 14566480 14566604 14566480 ID=Msa1236100-mRNA-1:exon:5613;Parent=Msa1236100-mRNA-1
chr8_2 exon 14567233 14567334 14567233 ID=Msa1236100-mRNA-1:exon:5612;Parent=Msa1236100-mRNA-1
chr8_2 exon 14567418 14567498 14567418 ID=Msa1236100-mRNA-1:exon:5611;Parent=Msa1236100-mRNA-1
chr8_2 exon 14568235 14568304 14568235 ID=Msa1236100-mRNA-1:exon:5610;Parent=Msa1236100-mRNA-1
chr8_2 exon 14569094 14569155 14569094 ID=Msa1236100-mRNA-1:exon:5609;Parent=Msa1236100-mRNA-1
chr8_2 exon 14570439 14570815 14570439 ID=Msa1236100-mRNA-1:exon:5608;Parent=Msa1236100-mRNA-1
chr8_2 exon 14570914 14570997 14570914 ID=Msa1236100-mRNA-1:exon:5607;Parent=Msa1236100-mRNA-1
chr8_2 exon 14571112 14571209 14571112 ID=Msa1236100-mRNA-1:exon:5606;Parent=Msa1236100-mRNA-1
chr8_2 exon 14571315 14571370 14571315 ID=Msa1236100-mRNA-1:exon:5605;Parent=Msa1236100-mRNA-1
chr8_2 exon 14571475 14571541 14571475 ID=Msa1236100-mRNA-1:exon:5604;Parent=Msa1236100-mRNA-1
chr8_2 exon 14571749 14571807 14571749 ID=Msa1236100-mRNA-1:exon:5603;Parent=Msa1236100-mRNA-1
chr8_2 exon 14571917 14572030 14571917 ID=Msa1236100-mRNA-1:exon:5602;Parent=Msa1236100-mRNA-1
chr8_2 exon 14572142 14572327 14572142 ID=Msa1236100-mRNA-1:exon:5601;Parent=Msa1236100-mRNA-1
chr8_2 exon 14572428 14573069 14572428 ID=Msa1236100-mRNA-1:exon:5600;Parent=Msa1236100-mRNA-1
chr8_2 exon 14573268 14573337 14573268 ID=Msa1236100-mRNA-1:exon:5599;Parent=Msa1236100-mRNA-1
chr8_2 exon 14573694 14573932 14573694 ID=Msa1236100-mRNA-1:exon:5598;Parent=Msa1236100-mRNA-1
chr8_2 five_prime_UTR 14573762 14573932 14573762 ID=Msa1236100-mRNA-1:five_prime_utr;Parent=Msa1236100-mRNA-1
chr8_2 CDS 14573694 14573761 14573694 ID=Msa1236100-mRNA-1:cds;Parent=Msa1236100-mRNA-1
chr8_2 CDS 14573268 14573337 14573268 ID=Msa1236100-mRNA-1:cds;Parent=Msa1236100-mRNA-1
chr8_2 CDS 14572428 14573069 14572428 ID=Msa1236100-mRNA-1:cds;Parent=Msa1236100-mRNA-1
chr8_2 CDS 14572142 14572327 14572142 ID=Msa1236100-mRNA-1:cds;Parent=Msa1236100-mRNA-1
chr8_2 CDS 14571917 14572030 14571917 ID=Msa1236100-mRNA-1:cds;Parent=Msa1236100-mRNA-1
chr8_2 CDS 14571749 14571807 14571749 ID=Msa1236100-mRNA-1:cds;Parent=Msa1236100-mRNA-1
chr8_2 CDS 14571475 14571541 14571475 ID=Msa1236100-mRNA-1:cds;Parent=Msa1236100-mRNA-1
chr8_2 CDS 14571315 14571370 14571315 ID=Msa1236100-mRNA-1:cds;Parent=Msa1236100-mRNA-1
chr8_2 CDS 14571112 14571209 14571112 ID=Msa1236100-mRNA-1:cds;Parent=Msa1236100-mRNA-1
chr8_2 CDS 14570914 14570997 14570914 ID=Msa1236100-mRNA-1:cds;Parent=Msa1236100-mRNA-1
chr8_2 CDS 14570439 14570815 14570439 ID=Msa1236100-mRNA-1:cds;Parent=Msa1236100-mRNA-1
chr8_2 CDS 14569094 14569155 14569094 ID=Msa1236100-mRNA-1:cds;Parent=Msa1236100-mRNA-1
chr8_2 CDS 14568235 14568304 14568235 ID=Msa1236100-mRNA-1:cds;Parent=Msa1236100-mRNA-1
chr8_2 CDS 14567418 14567498 14567418 ID=Msa1236100-mRNA-1:cds;Parent=Msa1236100-mRNA-1
chr8_2 CDS 14567233 14567334 14567233 ID=Msa1236100-mRNA-1:cds;Parent=Msa1236100-mRNA-1
chr8_2 CDS 14566480 14566604 14566480 ID=Msa1236100-mRNA-1:cds;Parent=Msa1236100-mRNA-1
chr8_2 CDS 14566028 14566148 14566028 ID=Msa1236100-mRNA-1:cds;Parent=Msa1236100-mRNA-1
chr8_2 CDS 14565828 14565929 14565828 ID=Msa1236100-mRNA-1:cds;Parent=Msa1236100-mRNA-1
chr8_2 three_prime_UTR 14564733 14565827 14564733 ID=Msa1236100-mRNA-1:three_prime_utr;Parent=Msa1236100-mRNA-1
chr8_2 three_prime_UTR 14564679 14564698 14564679 ID=Msa1236100-mRNA-1:three_prime_utr;Parent=Msa1236100-mRNA-1
Gene Sequence

>Msa1236100

ATGAACAAGACTCGCAAATCTTCTTCTTCTTCTTCAAATTCTCCTGTAATTACATTCGATCACAAGAGGGATGCCTATGGATTTACTGTGCGACCTCAACACCTGCAAAGATACCGTGAGTACGCTAGCATTTACAAGGAGGAAGAAGAGGAAAGGTCCGAGCGGTGGAAGTCTTTTTTAGATAGGCAGGCCGAGACAGAGTCTTCTGTATTGGACACAAACAGAACACCTGTGGGGGAAGAGAACAAAGTTTCTGGTGCTGAATCTGTAGGACAAGAACCTGATGCTAGCTCAGAGAAGGGTGTTGATGGGCAACAAGCAAGCGCTGATACTCCACCTGAAAATGGTAGTCAAAAGGAGGAGTTACCGGCATCCGAGGAGACTAGAATTCATAGAGTCCAGTTATGGTCAACCATAAGATCATCTCTTAATACTATTGAGGATATGATGAGCATTCGTGTTAATAAGAAAACTGGGTCCGTAAAAGATGAAAGAAATAAGAAAGGTGTGGTAAAAGATGAGCTGGTCACTGAAACTGAGTCACTATCTCTTGCTGATGGTGCAAAATCATCAAAAGGAGCATGTGAGGAAGATTCTGACGAGGAGTTCTATGATGTTGAGAGGTCAGACCCTAGTCTAGATACTCCTCTTGTTGATGGCTTGAGTACCTCAACAAATGGTATTGCTGCTGCTGCTGCACCACTAGAGGCTTCGTGTCCTTGGAAAGAAGAGTTGGAAGTTCTTGTTCGTGGGGGAGTTCCAATGGCACTGAGGGGAGAGCTCTGGCAAGCTTTTGTGGGTGTCAAAGCAAGGCGGGTAGAGAAGTATTATCAGGATCTACTGGCCTCCAATGGTGATTCTGGAATTAAAAGTAATCATCAAAACGGGCAGTTAGATGACAATGATGGGAAAACAAATGCAGAATTCATGCATGTACCAGAAAAATGGAAAGGACAGATTGAGAAGGATCTGCCGCGGACATTTCCTGGTCACCCTGCTTTGGACGAGGATGGTAGAAATGCTTTGAGACGATTACTTACTGCATATGCTCGACATAATCCCTCTGTTGGTTACTGTCAGGCCATGAATTTTTTTGCTGGCTTATTGTTGCTTTTGATGCCTGAGGAAAATGCCTTTTGGACCTTGATGGGCATTTTAGATGATTATTTTGATGGCTATTATTCAGAGGATATGATAGAGTCTCAGGTGGATCAACTTGTTTTTGAAGAGTTGGTGCGGGAGAGGTTTCCCAAATTGGGTTTCCAATCATCTAGATTATCTGGGAGTGCAGGTTGCATGGGTGACTGGACCATGGTTTCTTTCCATTTTTGTGAACATGCTTCCTTGGGAAAGTGGTCAGTGCTTCGAGTGTGGGATGTGCTTCTTTTTGAAGGAAACCGAGTCATGCTATTTAGAACTGCAGTTGCTTTAATGGAGCTATATGGTCCAGCCTTGGTAACAACAAAGGATGCTGGAGATGCAGTAACTTTACTTCAGTCATTAGCCGGCTCCACATTTGATAGCAGTCAGCTTGTTTTGACAGCTTGCATGGGTTACCAAAATATAAATGAAGTTCGATTGCAGGAGCTGAGGAATAAACATAGGCCAGCTGTAATAGCTGCAATTGAAGAAAGATCAAAAGGGCTTAAAGCTTTGAGGGATGCTAAGGGTCTGGTATCAAAGCTATTTGAGCAATCGAATAATGCGCAAGTGCTTGGGAATTTATCCCGTACAGAATCTGGTTCTACAAATGCAGATGAAATTTTGATTAGTCTTACTGGAGAGGGTGAGATAGATTCAGCTCCAGATCTTCCAGAGCAGATTGCATGGTTGAAAGTTGAACTTTGCAGATTATTAGAAGAGAAAAGATCAGCTATTCTCAGAGCAGAGGAGCTTGAAACAGCATTAATGGAGATGGTTAAGCAGGACAACAGGCGGGAACTGAGCGCCAAGGTAGAGCGACTAGAAGAAGAGGTTGCTGAGCTTCGACAAGCACTTTCTGATAAACAAGAACAGGAAACTGCAATGCTTCAGGTCTTGATGCGGGTAGAGCAAGAACAAAAGGTTACAGAGGATGCTCGGAGATTTGCTGAGCAAGATGCAACTGCACAGAGATATGCTTCCCAAGTGCTTCAGGAAAAGTATGAAGAAGCAACTGTTGCACTTGCAGAAATGGAGAAGAGAGCAGTTATGGCTGAGTCTATGCTGGAAGCTACTTTGCAGTATCAGTCTGGCCAAACTAAACTGCAACCATCTCCACGATCTTCACAGCCAGAATCTCCCGGATCTAGAAACAATCAAGAGCCTACGATGGATACCCCTACCAGGAGGATAAGTTTGCTTTCTCGACCATTTGGACTTGGATGGGGTGATCGAAACAAGGGGAAACCTACTAATGTGGAAGAACCAGCTGTAGTAGAAAGCCCTGTAAGTCAACATGAGGGAAATGGCGTTAAAGTACAAGATGAGTTGGAAACAAGATAG
Protein sequence

>Msa1236100

MNKTRKSSSSSSNSPVITFDHKRDAYGFTVRPQHLQRYREYASIYKEEEEERSERWKSFLDRQAETESSVLDTNRTPVGEENKVSGAESVGQEPDASSEKGVDGQQASADTPPENGSQKEELPASEETRIHRVQLWSTIRSSLNTIEDMMSIRVNKKTGSVKDERNKKGVVKDELVTETESLSLADGAKSSKGACEEDSDEEFYDVERSDPSLDTPLVDGLSTSTNGIAAAAAPLEASCPWKEELEVLVRGGVPMALRGELWQAFVGVKARRVEKYYQDLLASNGDSGIKSNHQNGQLDDNDGKTNAEFMHVPEKWKGQIEKDLPRTFPGHPALDEDGRNALRRLLTAYARHNPSVGYCQAMNFFAGLLLLLMPEENAFWTLMGILDDYFDGYYSEDMIESQVDQLVFEELVRERFPKLGFQSSRLSGSAGCMGDWTMVSFHFCEHASLGKWSVLRVWDVLLFEGNRVMLFRTAVALMELYGPALVTTKDAGDAVTLLQSLAGSTFDSSQLVLTACMGYQNINEVRLQELRNKHRPAVIAAIEERSKGLKALRDAKGLVSKLFEQSNNAQVLGNLSRTESGSTNADEILISLTGEGEIDSAPDLPEQIAWLKVELCRLLEEKRSAILRAEELETALMEMVKQDNRRELSAKVERLEEEVAELRQALSDKQEQETAMLQVLMRVEQEQKVTEDARRFAEQDATAQRYASQVLQEKYEEATVALAEMEKRAVMAESMLEATLQYQSGQTKLQPSPRSSQPESPGSRNNQEPTMDTPTRRISLLSRPFGLGWGDRNKGKPTNVEEPAVVESPVSQHEGNGVKVQDELETR*