Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463120 | XP_003600872.1 | 96.975 | 628 | 15 | 2 | 1 | 626 | 1 | 626 | 0.0 | 1253 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463120 | sp|Q9ZT48|ATE1_ARATH | 51.846 | 650 | 261 | 11 | 6 | 625 | 4 | 631 | 0.0 | 624 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463120 | G7JB71 | 96.975 | 628 | 15 | 2 | 1 | 626 | 1 | 626 | 0.0 | 1253 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0106620 | Msa0463120 | 0.824043 | 9.997265e-54 | -8.615850e-47 |
| Msa0373880 | Msa0463120 | 0.802227 | 6.199015e-49 | -8.615850e-47 |
| Msa0376020 | Msa0463120 | 0.803778 | 2.963616e-49 | -8.615850e-47 |
| Msa0463120 | Msa0516020 | 0.804102 | 2.538330e-49 | -8.615850e-47 |
| Msa0463120 | Msa0553200 | 0.802246 | 6.143763e-49 | -8.615850e-47 |
| Msa0463120 | Msa1188180 | 0.804962 | 1.679381e-49 | -8.615850e-47 |
| Msa0463120 | Msa1283740 | 0.811199 | 7.890701e-51 | -8.615850e-47 |
| Msa0463120 | Msa1345810 | 0.821995 | 3.001053e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463120 | MtrunA17_Chr3g0113281 | 96.975 | 628 | 15 | 2 | 1 | 626 | 1 | 626 | 0.0 | 1253 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463120 | AT5G05700.1 | 51.846 | 650 | 261 | 11 | 6 | 625 | 4 | 631 | 0.0 | 624 |
| Msa0463120 | AT3G11240.1 | 51.875 | 640 | 257 | 11 | 1 | 625 | 1 | 604 | 0.0 | 603 |
| Msa0463120 | AT3G11240.3 | 51.520 | 592 | 241 | 9 | 44 | 625 | 6 | 561 | 0.0 | 558 |
| Msa0463120 | AT5G05700.2 | 50.519 | 578 | 237 | 10 | 75 | 625 | 1 | 556 | 0.0 | 530 |
| Msa0463120 | AT3G11240.4 | 50.743 | 471 | 194 | 7 | 164 | 625 | 4 | 445 | 2.05e-149 | 439 |
| Msa0463120 | AT3G11240.2 | 50.743 | 471 | 194 | 7 | 164 | 625 | 4 | 445 | 2.05e-149 | 439 |
| Msa0463120 | AT3G11240.5 | 50.743 | 471 | 194 | 7 | 164 | 625 | 4 | 445 | 2.05e-149 | 439 |
Find 158 sgRNAs with CRISPR-Local
Find 403 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGAATTGTTTGAAGTATT+TGG | 0.169517 | 3_3:-62454603 | None:intergenic |
| GATTCAACAGTGAACATTTC+TGG | 0.176607 | 3_3:+62455020 | Msa0463120:CDS |
| TACTCTGCTCTTCAAGAAAT+TGG | 0.199151 | 3_3:+62455500 | Msa0463120:CDS |
| TTCTTGTGCATTTGCATATA+CGG | 0.212102 | 3_3:+62457090 | Msa0463120:three_prime_UTR |
| ACTCGACATTCTTCAATTTC+GGG | 0.215652 | 3_3:-62451416 | None:intergenic |
| CCAGCATTAGTTGCTGAATA+TGG | 0.218419 | 3_3:+62457141 | Msa0463120:three_prime_UTR |
| TTCAGAAGAGATGAAAATTT+AGG | 0.221231 | 3_3:-62451393 | None:intergenic |
| ATATACGGAATTTAATTTAA+TGG | 0.222822 | 3_3:+62457105 | Msa0463120:three_prime_UTR |
| CTATATAAAGCATATTCTTC+TGG | 0.228134 | 3_3:-62455212 | None:intergenic |
| TACTCGACATTCTTCAATTT+CGG | 0.228850 | 3_3:-62451417 | None:intergenic |
| CGATTCGTTGCAGACTTCTT+TGG | 0.247968 | 3_3:-62455134 | None:intergenic |
| TCCTTCTCACTATCTCTTGA+TGG | 0.258555 | 3_3:-62454948 | None:intergenic |
| ACAGTTCCTCCTTGTGGTTT+TGG | 0.260938 | 3_3:+62455347 | Msa0463120:CDS |
| TATCGAGTAAATATTTGTTC+TGG | 0.263562 | 3_3:+62455444 | Msa0463120:CDS |
| CAGCAACAACGCTTTCCTTT+GGG | 0.269424 | 3_3:-62451471 | None:intergenic |
| TTTGAAGTAGTTTCTATATC+AGG | 0.274161 | 3_3:-62456216 | None:intergenic |
| ACATTTCTGGTCTGTCTATC+AGG | 0.275790 | 3_3:+62455033 | Msa0463120:CDS |
| TCAGAAGAGATGAAAATTTA+GGG | 0.303811 | 3_3:-62451392 | None:intergenic |
| AAGTGACTTTGTTCCCTCTA+AGG | 0.312760 | 3_3:+62453344 | Msa0463120:CDS |
| TCAAATGGTGAACCAGAAAA+TGG | 0.316117 | 3_3:+62456234 | Msa0463120:CDS |
| GGGATTGTTCGATCTTTGAT+TGG | 0.329373 | 3_3:-62451372 | None:intergenic |
| GTATGTGAAACATATATTAA+TGG | 0.338861 | 3_3:-62455314 | None:intergenic |
| AAGGATCTGCAAAGTGTATT+TGG | 0.341290 | 3_3:+62456776 | Msa0463120:intron |
| TTTCCATCAACAGTATTTAG+TGG | 0.347193 | 3_3:+62455373 | Msa0463120:CDS |
| TCGGACTTAAATATTGATAT+AGG | 0.347773 | 3_3:-62451204 | None:intergenic |
| ACCATTCTGACTGAAGCTTT+TGG | 0.357966 | 3_3:-62454795 | None:intergenic |
| CCTTGTCTCTTGACTTTGCT+CGG | 0.359889 | 3_3:-62454908 | None:intergenic |
| TCAGCAACAACGCTTTCCTT+TGG | 0.361381 | 3_3:-62451472 | None:intergenic |
| TTCTGTTAGCTCTTCTTGAT+CGG | 0.362879 | 3_3:+62453238 | Msa0463120:intron |
| CATCCACTAAATACTGTTGA+TGG | 0.367065 | 3_3:-62455376 | None:intergenic |
| TTAATATATGTTTCACATAC+TGG | 0.367295 | 3_3:+62455317 | Msa0463120:CDS |
| TCTGTTAGCTCTTCTTGATC+GGG | 0.371855 | 3_3:+62453239 | Msa0463120:intron |
| TACACGAAGTTGTTCCTTAG+AGG | 0.382550 | 3_3:-62453358 | None:intergenic |
| ATCGAGTAAATATTTGTTCT+GGG | 0.383663 | 3_3:+62455445 | Msa0463120:CDS |
| TCTGCAACGAATCGTAATAT+TGG | 0.392297 | 3_3:+62455143 | Msa0463120:CDS |
| AGAAATGGTTGAATCTGAAT+TGG | 0.392690 | 3_3:+62456176 | Msa0463120:CDS |
| ATGGTAAATTAGTGGCAGTT+GGG | 0.392810 | 3_3:+62455396 | Msa0463120:CDS |
| CAGCTCCAGCTGCTGGATAC+AGG | 0.400677 | 3_3:-62456956 | None:intergenic |
| TGCCATTCCTAGAGACAAAT+GGG | 0.412386 | 3_3:-62456988 | None:intergenic |
| TAGCTCTTCTTGATCGGGGC+TGG | 0.413747 | 3_3:+62453244 | Msa0463120:intron |
| ATATTCTTCTGGATCAAAAC+TGG | 0.414826 | 3_3:-62455201 | None:intergenic |
| TGAAGAGGAAGATGAAGAAA+TGG | 0.419834 | 3_3:+62456161 | Msa0463120:CDS |
| GGATACAGGATCTTATTTGC+TGG | 0.421600 | 3_3:-62456942 | None:intergenic |
| TACACATGTTCACTGAGAAC+GGG | 0.427993 | 3_3:+62454748 | Msa0463120:CDS |
| TCATCTTCATCTTCATGCAT+TGG | 0.429505 | 3_3:-62456141 | None:intergenic |
| TTTGATCCCCATTTGTCTCT+AGG | 0.433714 | 3_3:+62456981 | Msa0463120:three_prime_UTR |
| AGAGATAGTGAGAAGGAGAA+TGG | 0.437181 | 3_3:+62454954 | Msa0463120:CDS |
| GATCGGGGCTGGAGAAGATC+TGG | 0.437268 | 3_3:+62453255 | Msa0463120:CDS |
| TATTTACTCGATAAACAGTT+AGG | 0.441413 | 3_3:-62455434 | None:intergenic |
| GTACTGGAGACTAGGACAAT+AGG | 0.443698 | 3_3:-62455543 | None:intergenic |
| TGCTCTTCAAGAAATTGGTT+GGG | 0.445508 | 3_3:+62455505 | Msa0463120:CDS |
| GAACCATGAGAGATGCTATT+GGG | 0.446557 | 3_3:-62451541 | None:intergenic |
| ACTGAACAATGAATTGAAAT+CGG | 0.447578 | 3_3:+62451341 | Msa0463120:five_prime_UTR |
| GATACAGGATCTTATTTGCT+GGG | 0.448971 | 3_3:-62456941 | None:intergenic |
| TTTAGTGGATGGTAAATTAG+TGG | 0.451470 | 3_3:+62455388 | Msa0463120:CDS |
| TCAAATTCAGCTCCAGCTGC+TGG | 0.453356 | 3_3:-62456963 | None:intergenic |
| TGCTTTCAAGCGGATTGTAT+AGG | 0.453379 | 3_3:-62453322 | None:intergenic |
| GGATTGTTCGATCTTTGATT+GGG | 0.453607 | 3_3:-62451371 | None:intergenic |
| GATATAGAAACTACTTCAAA+TGG | 0.453880 | 3_3:+62456219 | Msa0463120:CDS |
| ACCAAAAGCTTCAGTCAGAA+TGG | 0.453937 | 3_3:+62454794 | Msa0463120:CDS |
| AGTCTCCAGTACTATTATCT+TGG | 0.457037 | 3_3:+62455554 | Msa0463120:CDS |
| TGAACCATGAGAGATGCTAT+TGG | 0.459034 | 3_3:-62451542 | None:intergenic |
| ATGCCATTCCTAGAGACAAA+TGG | 0.459874 | 3_3:-62456989 | None:intergenic |
| TTTCTTTGTTACAGGCATGC+TGG | 0.460312 | 3_3:+62451827 | Msa0463120:intron |
| AGTGATAGAAAGGCAAAGTC+TGG | 0.460759 | 3_3:-62455470 | None:intergenic |
| CTGCTCTTCAAGAAATTGGT+TGG | 0.462545 | 3_3:+62455504 | Msa0463120:CDS |
| TGGAGCATGATGGGTTGTTA+TGG | 0.468006 | 3_3:-62454635 | None:intergenic |
| ATAGAACATAAAATTGATTG+AGG | 0.477237 | 3_3:-62457225 | None:intergenic |
| GATTGTATAGGAAGGGCAAC+AGG | 0.478971 | 3_3:-62453310 | None:intergenic |
| TTCAGTCAGAATGGTTTCAC+AGG | 0.478971 | 3_3:+62454803 | Msa0463120:CDS |
| CATCAACAGTATTTAGTGGA+TGG | 0.481200 | 3_3:+62455377 | Msa0463120:CDS |
| TAAAACTATTGCAGAAAAGC+TGG | 0.482141 | 3_3:+62454986 | Msa0463120:CDS |
| GGGTTTCATTTGACATTGCA+AGG | 0.485496 | 3_3:+62455971 | Msa0463120:CDS |
| CAGAAATACAGGAGGGTTGT+CGG | 0.488102 | 3_3:+62456833 | Msa0463120:CDS |
| CATTTCTGGTCTGTCTATCA+GGG | 0.490558 | 3_3:+62455034 | Msa0463120:CDS |
| TGATCTTCAGCAACTTGAAG+TGG | 0.497795 | 3_3:-62456063 | None:intergenic |
| AGTAGCCAAGATAATAGTAC+TGG | 0.499159 | 3_3:-62455559 | None:intergenic |
| TGAAGTATTTGGTTCCTCCA+TGG | 0.500622 | 3_3:-62454592 | None:intergenic |
| AGTCACAGTTGCAGAAATAC+AGG | 0.501911 | 3_3:+62456822 | Msa0463120:CDS |
| AAGATCCTGTATCCAGCAGC+TGG | 0.502219 | 3_3:+62456951 | Msa0463120:three_prime_UTR |
| GATGGTAAATTAGTGGCAGT+TGG | 0.505487 | 3_3:+62455395 | Msa0463120:CDS |
| CCATATTCAGCAACTAATGC+TGG | 0.513454 | 3_3:-62457141 | None:intergenic |
| GATCTTCAGCAACTTGAAGT+GGG | 0.518193 | 3_3:-62456062 | None:intergenic |
| TCTTCTGACATGGAGCATGA+TGG | 0.520063 | 3_3:-62454645 | None:intergenic |
| TCGTGAGCAGCAGAGATACT+TGG | 0.521603 | 3_3:+62456799 | Msa0463120:CDS |
| GTACTTGCCTAGTGATAGAA+AGG | 0.522687 | 3_3:-62455480 | None:intergenic |
| AAAAGAAGGTATTAGCCAAT+GGG | 0.524221 | 3_3:+62454829 | Msa0463120:CDS |
| TATAGATGCAGCAACTTGAA+AGG | 0.525347 | 3_3:-62454883 | None:intergenic |
| TCCCCATTTGTCTCTAGGAA+TGG | 0.525816 | 3_3:+62456986 | Msa0463120:three_prime_UTR |
| GCTACTATATAAGAGGTCTT+CGG | 0.526478 | 3_3:-62454853 | None:intergenic |
| CTTGACCACTGTCATCAACC+TGG | 0.528218 | 3_3:-62456101 | None:intergenic |
| CTTCTGACATGGAGCATGAT+GGG | 0.528703 | 3_3:-62454644 | None:intergenic |
| TTTGGTAATTGAATACCAGA+TGG | 0.531867 | 3_3:-62454777 | None:intergenic |
| GCATGAAGATGAAGATGAAG+AGG | 0.534785 | 3_3:+62456146 | Msa0463120:CDS |
| CTATATTGCTACTATATAAG+AGG | 0.536144 | 3_3:-62454860 | None:intergenic |
| AGAGGACATAGTAGCTCTGA+AGG | 0.537283 | 3_3:-62455626 | None:intergenic |
| TCAAGACACAATGTTAAGCC+AGG | 0.537431 | 3_3:+62456083 | Msa0463120:CDS |
| TCTATCTGTTAGCAATAAAG+AGG | 0.539337 | 3_3:+62454671 | Msa0463120:CDS |
| TAAGAGGTCTTCGGACCCAT+TGG | 0.540930 | 3_3:-62454844 | None:intergenic |
| TGGTTGGGTGAAAGATAACC+AGG | 0.546626 | 3_3:+62455520 | Msa0463120:CDS |
| TGGTAAATTAGTGGCAGTTG+GGG | 0.548028 | 3_3:+62455397 | Msa0463120:CDS |
| CAAAGTCACTTGCTTTCAAG+CGG | 0.550013 | 3_3:-62453332 | None:intergenic |
| GAGCGAATGGTCTACTCTCT+CGG | 0.557386 | 3_3:+62456869 | Msa0463120:CDS |
| TTCAAGCGGATTGTATAGGA+AGG | 0.557510 | 3_3:-62453318 | None:intergenic |
| GCAACGAATCGTAATATTGG+AGG | 0.558170 | 3_3:+62455146 | Msa0463120:CDS |
| ACACAGAAAGCTCATATCGC+AGG | 0.558720 | 3_3:+62455276 | Msa0463120:CDS |
| GAGAACGGGGAATTTCCATC+TGG | 0.560903 | 3_3:+62454762 | Msa0463120:CDS |
| TCTTAGTTGAAGCATCAAGT+TGG | 0.562178 | 3_3:+62457186 | Msa0463120:three_prime_UTR |
| CTGTCTATCAGGGCTTGCAA+TGG | 0.562657 | 3_3:+62455044 | Msa0463120:CDS |
| TCCAGTGTTATCCGAGCGAA+TGG | 0.566865 | 3_3:+62456856 | Msa0463120:CDS |
| TACTGCATTATCAATCTGAT+CGG | 0.571515 | 3_3:-62454727 | None:intergenic |
| ACACGAAGTTGTTCCTTAGA+GGG | 0.574435 | 3_3:-62453357 | None:intergenic |
| GTACACATGTTCACTGAGAA+CGG | 0.574951 | 3_3:+62454747 | Msa0463120:CDS |
| AGATAATAGTACTGGAGACT+AGG | 0.577677 | 3_3:-62455551 | None:intergenic |
| CATGCTGGCATATAGCCTTA+CGG | 0.578182 | 3_3:+62451842 | Msa0463120:CDS |
| CTGTTAGCTCTTCTTGATCG+GGG | 0.579685 | 3_3:+62453240 | Msa0463120:intron |
| GGAAAGCGTCGAAGCTCTTG+TGG | 0.580414 | 3_3:+62451499 | Msa0463120:CDS |
| GACTTTGCCTTTCTATCACT+AGG | 0.581918 | 3_3:+62455473 | Msa0463120:CDS |
| AGCAACAACGCTTTCCTTTG+GGG | 0.582980 | 3_3:-62451470 | None:intergenic |
| GAAAGCGTTGTTGCTGATTG+CGG | 0.585631 | 3_3:+62451478 | Msa0463120:CDS |
| GGAGACTAGGACAATAGGCC+TGG | 0.586272 | 3_3:-62455538 | None:intergenic |
| TCTCTCGGTTAATTATATCT+CGG | 0.586725 | 3_3:+62456884 | Msa0463120:exon |
| CTTGGTAGTCATACACCGTA+AGG | 0.588665 | 3_3:-62451857 | None:intergenic |
| ATCTGTTAGCAATAAAGAGG+TGG | 0.589633 | 3_3:+62454674 | Msa0463120:CDS |
| ACCATCAAGAGATAGTGAGA+AGG | 0.595095 | 3_3:+62454947 | Msa0463120:CDS |
| GATAACACAGTTCCTCCTTG+TGG | 0.595810 | 3_3:+62455341 | Msa0463120:CDS |
| CGTCCCAATAGCATCTCTCA+TGG | 0.596130 | 3_3:+62451538 | Msa0463120:CDS |
| GGGATCCCGTGTGAGATACA+AGG | 0.598121 | 3_3:+62456287 | Msa0463120:CDS |
| AGATAGAGATTCTTCTGACA+TGG | 0.604313 | 3_3:-62454655 | None:intergenic |
| ATCTTCAGCAACTTGAAGTG+GGG | 0.605213 | 3_3:-62456061 | None:intergenic |
| ATCATACCTTGTATCTCACA+CGG | 0.611139 | 3_3:-62456293 | None:intergenic |
| ATGATGGGTTGTTATGGACA+AGG | 0.611276 | 3_3:-62454629 | None:intergenic |
| TGAGAGATGCTATTGGGACG+AGG | 0.618053 | 3_3:-62451535 | None:intergenic |
| TCAGTCAGAATGGTTTCACA+GGG | 0.619527 | 3_3:+62454804 | Msa0463120:CDS |
| CCGAGCAAAGTCAAGAGACA+AGG | 0.622600 | 3_3:+62454908 | Msa0463120:CDS |
| ACCATTCGCTCGGATAACAC+TGG | 0.627386 | 3_3:-62456857 | None:intergenic |
| GAAGAATGTCGAGTACGAAG+AGG | 0.633268 | 3_3:+62451425 | Msa0463120:exon |
| CACAGTTGCAGAAATACAGG+AGG | 0.636902 | 3_3:+62456825 | Msa0463120:CDS |
| ATACAGGATCTTATTTGCTG+GGG | 0.638032 | 3_3:-62456940 | None:intergenic |
| TAACGCTTTCTGTCAAGCAA+CGG | 0.646734 | 3_3:-62455994 | None:intergenic |
| TCAAGCGGATTGTATAGGAA+GGG | 0.647018 | 3_3:-62453317 | None:intergenic |
| TGGAAAGAGCCAAAACCACA+AGG | 0.651081 | 3_3:-62455356 | None:intergenic |
| TAGCAGTAGCAAAACCCCAA+AGG | 0.653048 | 3_3:+62451456 | Msa0463120:CDS |
| TTAACTTACTGATAGCGAAG+AGG | 0.662453 | 3_3:-62455644 | None:intergenic |
| GCAAAGTCAAGAGACAAGGA+TGG | 0.667681 | 3_3:+62454912 | Msa0463120:CDS |
| GAGAGAGTAGACCATTCGCT+CGG | 0.668897 | 3_3:-62456867 | None:intergenic |
| TGTTAAAAGAGTTGATGCCA+TGG | 0.669144 | 3_3:+62454575 | Msa0463120:CDS |
| GTGTATCTAGACGAATGCAA+AGG | 0.675511 | 3_3:+62453376 | Msa0463120:CDS |
| TAAAAGAGTTGATGCCATGG+AGG | 0.680258 | 3_3:+62454578 | Msa0463120:CDS |
| TCATACCTTGTATCTCACAC+GGG | 0.681061 | 3_3:-62456292 | None:intergenic |
| GAGGACATAGTAGCTCTGAA+GGG | 0.681722 | 3_3:-62455625 | None:intergenic |
| ACACATGTTCACTGAGAACG+GGG | 0.689010 | 3_3:+62454749 | Msa0463120:CDS |
| TTAAGCCAGGTTGATGACAG+TGG | 0.699199 | 3_3:+62456096 | Msa0463120:CDS |
| GCCATTCCTAGAGACAAATG+GGG | 0.712514 | 3_3:-62456987 | None:intergenic |
| CTTACGGTGTATGACTACCA+AGG | 0.718339 | 3_3:+62451858 | Msa0463120:CDS |
| ACAGTTGCAGAAATACAGGA+GGG | 0.725694 | 3_3:+62456826 | Msa0463120:CDS |
| AAAGAGCCAAAACCACAAGG+AGG | 0.739577 | 3_3:-62455353 | None:intergenic |
| CAGTCAGAATGGTTTCACAG+GGG | 0.766259 | 3_3:+62454805 | Msa0463120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAAAATATATATTTTAT+AGG | + | chr3_3:62452299-62452318 | Msa0463120:intron | 0.0% |
| !! | TTAATTATAAATAAAAAAAA+TGG | - | chr3_3:62454299-62454318 | None:intergenic | 0.0% |
| !!! | AAAATTCATGTTTTTTTTTA+TGG | + | chr3_3:62452497-62452516 | Msa0463120:intron | 10.0% |
| !! | ATTATAAATAAAAAAAATGG+TGG | - | chr3_3:62454296-62454315 | None:intergenic | 10.0% |
| !! | TTGAAAAACAATAAATTTGT+CGG | - | chr3_3:62451226-62451245 | None:intergenic | 15.0% |
| !!! | TTTGAATTCTTTTCTTTTTT+TGG | - | chr3_3:62451310-62451329 | None:intergenic | 15.0% |
| !!! | AAACCAAAACTTTTTTTATT+GGG | - | chr3_3:62451641-62451660 | None:intergenic | 15.0% |
| !!! | AAAACCAAAACTTTTTTTAT+TGG | - | chr3_3:62451642-62451661 | None:intergenic | 15.0% |
| !! | AAAAAAAAAGAATTTCTTAC+TGG | + | chr3_3:62451729-62451748 | Msa0463120:intron | 15.0% |
| !! | AAAAAAAAGAATTTCTTACT+GGG | + | chr3_3:62451730-62451749 | Msa0463120:intron | 15.0% |
| !!! | AAGTAATTATGATACTTTTT+TGG | - | chr3_3:62452273-62452292 | None:intergenic | 15.0% |
| !!! | ACTTTTGATTTTTAAATTGA+TGG | + | chr3_3:62453434-62453453 | Msa0463120:intron | 15.0% |
| !! | ATGAAAATTGTAACATATAA+AGG | - | chr3_3:62453685-62453704 | None:intergenic | 15.0% |
| !!! | TTTTTGAATAGTAACATTTT+GGG | - | chr3_3:62455105-62455124 | None:intergenic | 15.0% |
| !!! | ATATACGGAATTTAATTTAA+TGG | + | chr3_3:62457105-62457124 | Msa0463120:three_prime_UTR | 15.0% |
| !!! | ATTCTTTTCTTTTTTTGGAA+TGG | - | chr3_3:62451305-62451324 | None:intergenic | 20.0% |
| !! | AAACAAATTCAACGAAATTA+GGG | - | chr3_3:62451586-62451605 | None:intergenic | 20.0% |
| !!! | AAACCCAATAAAAAAAGTTT+TGG | + | chr3_3:62451635-62451654 | Msa0463120:intron | 20.0% |
| !!! | TTTCTTTTTTTCTTTGTTAC+AGG | + | chr3_3:62451819-62451838 | Msa0463120:intron | 20.0% |
| !! | TATAAAAAAAAGTTGAGACA+AGG | + | chr3_3:62452382-62452401 | Msa0463120:intron | 20.0% |
| !!! | AAAAACATGAATTTTAAGTC+TGG | - | chr3_3:62452492-62452511 | None:intergenic | 20.0% |
| !!! | ATGTTTTTTTTTATGGATGA+TGG | + | chr3_3:62452504-62452523 | Msa0463120:intron | 20.0% |
| !!! | ACGTAAAGTTTTTGAAATTT+AGG | - | chr3_3:62452805-62452824 | None:intergenic | 20.0% |
| !!! | TGGAACTTTTATTTATAAAC+CGG | + | chr3_3:62453275-62453294 | Msa0463120:CDS | 20.0% |
| !!! | AAACTTTTTTCTATTTTCTC+TGG | + | chr3_3:62454321-62454340 | Msa0463120:intron | 20.0% |
| !!! | CTTTTTGAATAGTAACATTT+TGG | - | chr3_3:62455106-62455125 | None:intergenic | 20.0% |
| !! | GTATGTGAAACATATATTAA+TGG | - | chr3_3:62455317-62455336 | None:intergenic | 20.0% |
| !! | TTAATATATGTTTCACATAC+TGG | + | chr3_3:62455317-62455336 | Msa0463120:CDS | 20.0% |
| !! | AGTAACATTATCTATTTCAT+AGG | - | chr3_3:62455805-62455824 | None:intergenic | 20.0% |
| !! | AAATAAAATATCGGTAAGTA+GGG | - | chr3_3:62456544-62456563 | None:intergenic | 20.0% |
| !!! | ATTATCTGAACTTAAGTTTT+TGG | + | chr3_3:62457023-62457042 | Msa0463120:three_prime_UTR | 20.0% |
| !! | ATAGAACATAAAATTGATTG+AGG | - | chr3_3:62457228-62457247 | None:intergenic | 20.0% |
| ! | TCGGACTTAAATATTGATAT+AGG | - | chr3_3:62451207-62451226 | None:intergenic | 25.0% |
| ! | ACTGAACAATGAATTGAAAT+CGG | + | chr3_3:62451341-62451360 | Msa0463120:five_prime_UTR | 25.0% |
| ! | TCAGAAGAGATGAAAATTTA+GGG | - | chr3_3:62451395-62451414 | None:intergenic | 25.0% |
| ! | TTCAGAAGAGATGAAAATTT+AGG | - | chr3_3:62451396-62451415 | None:intergenic | 25.0% |
| ! | AACAAATTCAACGAAATTAG+GGG | - | chr3_3:62451585-62451604 | None:intergenic | 25.0% |
| ! | CAAACAAATTCAACGAAATT+AGG | - | chr3_3:62451587-62451606 | None:intergenic | 25.0% |
| !! | AATTTCGTTGAATTTGTTTG+CGG | + | chr3_3:62451587-62451606 | Msa0463120:intron | 25.0% |
| !!! | TTTTTAACTGAAACGTGAAT+TGG | + | chr3_3:62451658-62451677 | Msa0463120:intron | 25.0% |
| !!! | TTTTAACTGAAACGTGAATT+GGG | + | chr3_3:62451659-62451678 | Msa0463120:intron | 25.0% |
| !!! | TTTTTTATGGATGATGGTAA+TGG | + | chr3_3:62452510-62452529 | Msa0463120:intron | 25.0% |
| !!! | TTTTTATGGATGATGGTAAT+GGG | + | chr3_3:62452511-62452530 | Msa0463120:intron | 25.0% |
| !! | TTTTGTTGATATCCTAACAT+AGG | + | chr3_3:62452593-62452612 | Msa0463120:intron | 25.0% |
| ! | TTTGTTGATATCCTAACATA+GGG | + | chr3_3:62452594-62452613 | Msa0463120:intron | 25.0% |
| !!! | TTTTATTTATAAACCGGAGA+TGG | + | chr3_3:62453281-62453300 | Msa0463120:CDS | 25.0% |
| ! | CATCATTATAGACATGATAT+GGG | + | chr3_3:62453513-62453532 | Msa0463120:intron | 25.0% |
| ! | GAGATAAATATGAATTCGAT+AGG | - | chr3_3:62453747-62453766 | None:intergenic | 25.0% |
| ! | TCAGTAAAAGAATAAACCTT+TGG | + | chr3_3:62454022-62454041 | Msa0463120:intron | 25.0% |
| ! | CAGTAAAAGAATAAACCTTT+GGG | + | chr3_3:62454023-62454042 | Msa0463120:intron | 25.0% |
| ! | TTCTTGCTAAAATAAAGGAA+AGG | - | chr3_3:62454400-62454419 | None:intergenic | 25.0% |
| ! | GAAAGTTCTTGCTAAAATAA+AGG | - | chr3_3:62454405-62454424 | None:intergenic | 25.0% |
| !!! | TATTTTAGCAAGAACTTTCA+AGG | + | chr3_3:62454406-62454425 | Msa0463120:intron | 25.0% |
| ! | TGAATTGCATATAATAGAAG+GGG | - | chr3_3:62454458-62454477 | None:intergenic | 25.0% |
| ! | GTGAATTGCATATAATAGAA+GGG | - | chr3_3:62454459-62454478 | None:intergenic | 25.0% |
| ! | AGTGAATTGCATATAATAGA+AGG | - | chr3_3:62454460-62454479 | None:intergenic | 25.0% |
| ! | AAACAAATTGGAACATTTAC+GGG | - | chr3_3:62454500-62454519 | None:intergenic | 25.0% |
| ! | CAAACAAATTGGAACATTTA+CGG | - | chr3_3:62454501-62454520 | None:intergenic | 25.0% |
| !! | TCTGAATTGTTTGAAGTATT+TGG | - | chr3_3:62454606-62454625 | None:intergenic | 25.0% |
| ! | CTATATTGCTACTATATAAG+AGG | - | chr3_3:62454863-62454882 | None:intergenic | 25.0% |
| ! | CTATATAAAGCATATTCTTC+TGG | - | chr3_3:62455215-62455234 | None:intergenic | 25.0% |
| ! | TATTTACTCGATAAACAGTT+AGG | - | chr3_3:62455437-62455456 | None:intergenic | 25.0% |
| ! | TATCGAGTAAATATTTGTTC+TGG | + | chr3_3:62455444-62455463 | Msa0463120:CDS | 25.0% |
| ! | ATCGAGTAAATATTTGTTCT+GGG | + | chr3_3:62455445-62455464 | Msa0463120:CDS | 25.0% |
| ! | AGAAGAAAAAAATCAAGCAA+CGG | - | chr3_3:62455876-62455895 | None:intergenic | 25.0% |
| !! | TTTGAAGTAGTTTCTATATC+AGG | - | chr3_3:62456219-62456238 | None:intergenic | 25.0% |
| ! | GATATAGAAACTACTTCAAA+TGG | + | chr3_3:62456219-62456238 | Msa0463120:CDS | 25.0% |
| ! | GTATGAAAAGGAAGAAATAT+AGG | - | chr3_3:62456473-62456492 | None:intergenic | 25.0% |
| !! | TTTGTCTTGGTAAATCTTTT+CGG | - | chr3_3:62456505-62456524 | None:intergenic | 25.0% |
| !! | GAGTAATTACAATTTTGTCT+TGG | - | chr3_3:62456518-62456537 | None:intergenic | 25.0% |
| ! | AATAAAATATCGGTAAGTAG+GGG | - | chr3_3:62456543-62456562 | None:intergenic | 25.0% |
| ! | CAAATAAAATATCGGTAAGT+AGG | - | chr3_3:62456545-62456564 | None:intergenic | 25.0% |
| !! | CTACTTACCGATATTTTATT+TGG | + | chr3_3:62456543-62456562 | Msa0463120:intron | 25.0% |
| ! | GTTACCTCCAAATAAAATAT+CGG | - | chr3_3:62456553-62456572 | None:intergenic | 25.0% |
| !!! | ATATTTTATTTGGAGGTAAC+CGG | + | chr3_3:62456553-62456572 | Msa0463120:intron | 25.0% |
| !!! | TTAGTTTTTCCTTAAACACA+TGG | - | chr3_3:62456612-62456631 | None:intergenic | 25.0% |
| TACTCGACATTCTTCAATTT+CGG | - | chr3_3:62451420-62451439 | None:intergenic | 30.0% | |
| TGTTTGGATTGTTGTGTTAT+AGG | + | chr3_3:62451754-62451773 | Msa0463120:intron | 30.0% | |
| TTAGAAGCCTATAAAGAAGA+GGG | - | chr3_3:62452134-62452153 | None:intergenic | 30.0% | |
| ATTAGAAGCCTATAAAGAAG+AGG | - | chr3_3:62452135-62452154 | None:intergenic | 30.0% | |
| ATTTGCCAACAAACCATTAT+AGG | + | chr3_3:62452191-62452210 | Msa0463120:intron | 30.0% | |
| GATACTTATAAGATGCTTCA+CGG | + | chr3_3:62452321-62452340 | Msa0463120:intron | 30.0% | |
| GCTTAATAACTAGATTAGCA+TGG | + | chr3_3:62452920-62452939 | Msa0463120:intron | 30.0% | |
| ! | GGTACTAGTTTATTGTTCAT+GGG | - | chr3_3:62452957-62452976 | None:intergenic | 30.0% |
| ! | AGGTACTAGTTTATTGTTCA+TGG | - | chr3_3:62452958-62452977 | None:intergenic | 30.0% |
| TCTAAGTAAAGATTCTTGGA+AGG | - | chr3_3:62452991-62453010 | None:intergenic | 30.0% | |
| !! | TGGTTCTAAGTAAAGATTCT+TGG | - | chr3_3:62452995-62453014 | None:intergenic | 30.0% |
| TAAGCCTTCTCTATTTAAAG+AGG | - | chr3_3:62453028-62453047 | None:intergenic | 30.0% | |
| AAGGCTTATCTCATCTAAAA+AGG | + | chr3_3:62453040-62453059 | Msa0463120:intron | 30.0% | |
| AGGCTTATCTCATCTAAAAA+GGG | + | chr3_3:62453041-62453060 | Msa0463120:intron | 30.0% | |
| ATCAGCAAATCAATTTAGCT+TGG | - | chr3_3:62453182-62453201 | None:intergenic | 30.0% | |
| !! | TGATTTGCTGATATGACTTT+CGG | + | chr3_3:62453190-62453209 | Msa0463120:intron | 30.0% |
| ! | TTCAAGTTCAAAAGCTTTGT+TGG | + | chr3_3:62453490-62453509 | Msa0463120:intron | 30.0% |
| GCATCATTATAGACATGATA+TGG | + | chr3_3:62453512-62453531 | Msa0463120:intron | 30.0% | |
| TTATATCAGTCAAATGAGTG+AGG | - | chr3_3:62453574-62453593 | None:intergenic | 30.0% | |
| ACATATAAAGGAAACTCTGA+AGG | - | chr3_3:62453673-62453692 | None:intergenic | 30.0% | |
| ! | TGTTACAATTTTCATTCTCC+CGG | + | chr3_3:62453690-62453709 | Msa0463120:intron | 30.0% |
| TATTCAACTCGTATTCCAAA+AGG | - | chr3_3:62454241-62454260 | None:intergenic | 30.0% | |
| !!! | CTTTTTTCTATTTTCTCTGG+AGG | + | chr3_3:62454324-62454343 | Msa0463120:intron | 30.0% |
| TTTCAAGGAGGTTAAATACA+CGG | + | chr3_3:62454421-62454440 | Msa0463120:intron | 30.0% | |
| AATTGCATATAATAGAAGGG+GGG | - | chr3_3:62454456-62454475 | None:intergenic | 30.0% | |
| GAATTGCATATAATAGAAGG+GGG | - | chr3_3:62454457-62454476 | None:intergenic | 30.0% | |
| GAAAAGTGGAACAAACAAAT+TGG | - | chr3_3:62454512-62454531 | None:intergenic | 30.0% | |
| !! | TTTCTTCCTAGGTTTTTAGA+TGG | + | chr3_3:62454543-62454562 | Msa0463120:intron | 30.0% |
| ! | ATCAACTCTTTTAACATCCA+AGG | - | chr3_3:62454571-62454590 | None:intergenic | 30.0% |
| TCTATCTGTTAGCAATAAAG+AGG | + | chr3_3:62454671-62454690 | Msa0463120:CDS | 30.0% | |
| TACTGCATTATCAATCTGAT+CGG | - | chr3_3:62454730-62454749 | None:intergenic | 30.0% | |
| ! | TTTGGTAATTGAATACCAGA+TGG | - | chr3_3:62454780-62454799 | None:intergenic | 30.0% |
| !! | AAAAAGAAGGTATTAGCCAA+TGG | + | chr3_3:62454828-62454847 | Msa0463120:CDS | 30.0% |
| !! | AAAAGAAGGTATTAGCCAAT+GGG | + | chr3_3:62454829-62454848 | Msa0463120:CDS | 30.0% |
| ! | AGCTTTTCTGCAATAGTTTT+AGG | - | chr3_3:62454987-62455006 | None:intergenic | 30.0% |
| TAAAACTATTGCAGAAAAGC+TGG | + | chr3_3:62454986-62455005 | Msa0463120:CDS | 30.0% | |
| ATATTCTTCTGGATCAAAAC+TGG | - | chr3_3:62455204-62455223 | None:intergenic | 30.0% | |
| TTTCCATCAACAGTATTTAG+TGG | + | chr3_3:62455373-62455392 | Msa0463120:CDS | 30.0% | |
| ! | TTTAGTGGATGGTAAATTAG+TGG | + | chr3_3:62455388-62455407 | Msa0463120:CDS | 30.0% |
| TATAGTAGAAGACTATGAAG+AGG | - | chr3_3:62455836-62455855 | None:intergenic | 30.0% | |
| TTTCACATAATATAGGAGGT+GGG | - | chr3_3:62455917-62455936 | None:intergenic | 30.0% | |
| CTTGTTTCACATAATATAGG+AGG | - | chr3_3:62455921-62455940 | None:intergenic | 30.0% | |
| CTCCTATATTATGTGAAACA+AGG | + | chr3_3:62455919-62455938 | Msa0463120:intron | 30.0% | |
| !! | AGCCTTGTTTCACATAATAT+AGG | - | chr3_3:62455924-62455943 | None:intergenic | 30.0% |
| ! | GATGCTTCCATTTTACAAAA+TGG | + | chr3_3:62456030-62456049 | Msa0463120:CDS | 30.0% |
| ! | TGACTCTCCATTTTGTAAAA+TGG | - | chr3_3:62456040-62456059 | None:intergenic | 30.0% |
| ! | ATTTCAGCAAAGTTTTGCTA+GGG | + | chr3_3:62456259-62456278 | Msa0463120:CDS | 30.0% |
| ! | AAAGTTTTGCTAGGGATAAA+GGG | + | chr3_3:62456267-62456286 | Msa0463120:CDS | 30.0% |
| !! | CAACTAACATTTTCTAAGGA+TGG | - | chr3_3:62456371-62456390 | None:intergenic | 30.0% |
| ! | TTCGCAACTAACATTTTCTA+AGG | - | chr3_3:62456375-62456394 | None:intergenic | 30.0% |
| TGTTAGTTGCGAAAAATTGT+AGG | + | chr3_3:62456382-62456401 | Msa0463120:intron | 30.0% | |
| ATAGCGAGTATGTTTCAAAA+TGG | + | chr3_3:62456423-62456442 | Msa0463120:intron | 30.0% | |
| ! | TTGTCTTGGTAAATCTTTTC+GGG | - | chr3_3:62456504-62456523 | None:intergenic | 30.0% |
| !! | CTTACCGATATTTTATTTGG+AGG | + | chr3_3:62456546-62456565 | Msa0463120:intron | 30.0% |
| !!! | CAACATGACTAGTTTTACAT+TGG | - | chr3_3:62456639-62456658 | None:intergenic | 30.0% |
| ATGATTTATTTGTCCCATTC+TGG | + | chr3_3:62456703-62456722 | Msa0463120:intron | 30.0% | |
| TCTCTCGGTTAATTATATCT+CGG | + | chr3_3:62456884-62456903 | Msa0463120:exon | 30.0% | |
| !!! | GAACTTAAGTTTTTGGTCAA+TGG | + | chr3_3:62457030-62457049 | Msa0463120:three_prime_UTR | 30.0% |
| TTCTTGTGCATTTGCATATA+CGG | + | chr3_3:62457090-62457109 | Msa0463120:three_prime_UTR | 30.0% | |
| GGATTGTTCGATCTTTGATT+GGG | - | chr3_3:62451374-62451393 | None:intergenic | 35.0% | |
| ACTCGACATTCTTCAATTTC+GGG | - | chr3_3:62451419-62451438 | None:intergenic | 35.0% | |
| ATTAGGGGAATTGAAGAGAA+AGG | - | chr3_3:62451570-62451589 | None:intergenic | 35.0% | |
| ! | AATTGGGTTGTTGTTGTAGT+TGG | + | chr3_3:62451675-62451694 | Msa0463120:intron | 35.0% |
| GAATTTCTTACTGGGTTGTT+TGG | + | chr3_3:62451738-62451757 | Msa0463120:intron | 35.0% | |
| TGTTTGACATTCTTTGTGCT+TGG | + | chr3_3:62451888-62451907 | Msa0463120:intron | 35.0% | |
| AGTTCCAAACCATGTCATAT+GGG | - | chr3_3:62452035-62452054 | None:intergenic | 35.0% | |
| !! | TCATCACATTGGTGTCAAAA+AGG | - | chr3_3:62452089-62452108 | None:intergenic | 35.0% |
| TAGAAGCCTATAAAGAAGAG+GGG | - | chr3_3:62452133-62452152 | None:intergenic | 35.0% | |
| TCCAAATGTGCTTATGCTTT+CGG | + | chr3_3:62452164-62452183 | Msa0463120:intron | 35.0% | |
| TTTCTGCAATATGTATCCGA+GGG | - | chr3_3:62452352-62452371 | None:intergenic | 35.0% | |
| ! | TTTTCTGCAATATGTATCCG+AGG | - | chr3_3:62452353-62452372 | None:intergenic | 35.0% |
| ACAAGGTTGTGATAATTCAG+TGG | + | chr3_3:62452399-62452418 | Msa0463120:intron | 35.0% | |
| TTGATATCCTAACATAGGGA+TGG | + | chr3_3:62452598-62452617 | Msa0463120:intron | 35.0% | |
| ACTTTACGTATCAGTGTATC+CGG | + | chr3_3:62452816-62452835 | Msa0463120:intron | 35.0% | |
| TCTAGTTATTAAGCCTGACT+CGG | - | chr3_3:62452914-62452933 | None:intergenic | 35.0% | |
| ! | ACTAGTTTATTGTTCATGGG+AGG | - | chr3_3:62452954-62452973 | None:intergenic | 35.0% |
| AGTAAAGATTCTTGGAAGGA+GGG | - | chr3_3:62452987-62453006 | None:intergenic | 35.0% | |
| AAGTAAAGATTCTTGGAAGG+AGG | - | chr3_3:62452988-62453007 | None:intergenic | 35.0% | |
| CTTCTCTATTTAAAGAGGTC+GGG | - | chr3_3:62453023-62453042 | None:intergenic | 35.0% | |
| CCTTCTCTATTTAAAGAGGT+CGG | - | chr3_3:62453024-62453043 | None:intergenic | 35.0% | |
| GGCTTATCTCATCTAAAAAG+GGG | + | chr3_3:62453042-62453061 | Msa0463120:intron | 35.0% | |
| TAATAACTAGGATCGCAACA+GGG | - | chr3_3:62453103-62453122 | None:intergenic | 35.0% | |
| TTAATAACTAGGATCGCAAC+AGG | - | chr3_3:62453104-62453123 | None:intergenic | 35.0% | |
| TTGCGATCCTAGTTATTAAC+AGG | + | chr3_3:62453105-62453124 | Msa0463120:intron | 35.0% | |
| TACTGCTCCTGTTAATAACT+AGG | - | chr3_3:62453115-62453134 | None:intergenic | 35.0% | |
| ! | TTCTGTTAGCTCTTCTTGAT+CGG | + | chr3_3:62453238-62453257 | Msa0463120:intron | 35.0% |
| ATTACGTATCAGTGAGAAAG+AGG | - | chr3_3:62453608-62453627 | None:intergenic | 35.0% | |
| ! | AGCATAAGCATCTAAGATTC+CGG | - | chr3_3:62453712-62453731 | None:intergenic | 35.0% |
| CTTGCTAGTTGTTATACACA+AGG | + | chr3_3:62453965-62453984 | Msa0463120:intron | 35.0% | |
| AAATCAAATCACCATTCACC+AGG | - | chr3_3:62454062-62454081 | None:intergenic | 35.0% | |
| !! | TTTTCTATTTTCTCTGGAGG+TGG | + | chr3_3:62454327-62454346 | Msa0463120:intron | 35.0% |
| !! | TTTCTATTTTCTCTGGAGGT+GGG | + | chr3_3:62454328-62454347 | Msa0463120:intron | 35.0% |
| TTTAGCAAGAACTTTCAAGG+AGG | + | chr3_3:62454409-62454428 | Msa0463120:intron | 35.0% | |
| TTCAAGGAGGTTAAATACAC+GGG | + | chr3_3:62454422-62454441 | Msa0463120:intron | 35.0% | |
| ATTGCATATAATAGAAGGGG+GGG | - | chr3_3:62454455-62454474 | None:intergenic | 35.0% | |
| AAGGTTCCATCTAAAAACCT+AGG | - | chr3_3:62454552-62454571 | None:intergenic | 35.0% | |
| !! | TAGGTTTTTAGATGGAACCT+TGG | + | chr3_3:62454551-62454570 | Msa0463120:intron | 35.0% |
| !! | TGTTAAAAGAGTTGATGCCA+TGG | + | chr3_3:62454575-62454594 | Msa0463120:CDS | 35.0% |
| AGATAGAGATTCTTCTGACA+TGG | - | chr3_3:62454658-62454677 | None:intergenic | 35.0% | |
| ATCTGTTAGCAATAAAGAGG+TGG | + | chr3_3:62454674-62454693 | Msa0463120:CDS | 35.0% | |
| GCTACTATATAAGAGGTCTT+CGG | - | chr3_3:62454856-62454875 | None:intergenic | 35.0% | |
| TATAGATGCAGCAACTTGAA+AGG | - | chr3_3:62454886-62454905 | None:intergenic | 35.0% | |
| GATTCAACAGTGAACATTTC+TGG | + | chr3_3:62455020-62455039 | Msa0463120:CDS | 35.0% | |
| TCTGCAACGAATCGTAATAT+TGG | + | chr3_3:62455143-62455162 | Msa0463120:CDS | 35.0% | |
| ! | GAGCTTTCTGTGTAATTTTC+TGG | - | chr3_3:62455269-62455288 | None:intergenic | 35.0% |
| CATCCACTAAATACTGTTGA+TGG | - | chr3_3:62455379-62455398 | None:intergenic | 35.0% | |
| CATCAACAGTATTTAGTGGA+TGG | + | chr3_3:62455377-62455396 | Msa0463120:CDS | 35.0% | |
| ATGGTAAATTAGTGGCAGTT+GGG | + | chr3_3:62455396-62455415 | Msa0463120:CDS | 35.0% | |
| TACTCTGCTCTTCAAGAAAT+TGG | + | chr3_3:62455500-62455519 | Msa0463120:CDS | 35.0% | |
| TGCTCTTCAAGAAATTGGTT+GGG | + | chr3_3:62455505-62455524 | Msa0463120:CDS | 35.0% | |
| ! | AGATAATAGTACTGGAGACT+AGG | - | chr3_3:62455554-62455573 | None:intergenic | 35.0% |
| AGTCTCCAGTACTATTATCT+TGG | + | chr3_3:62455554-62455573 | Msa0463120:CDS | 35.0% | |
| AGTAGCCAAGATAATAGTAC+TGG | - | chr3_3:62455562-62455581 | None:intergenic | 35.0% | |
| ! | TTAACTTACTGATAGCGAAG+AGG | - | chr3_3:62455647-62455666 | None:intergenic | 35.0% |
| GTTTGGATAAACTACAAGCA+TGG | - | chr3_3:62455704-62455723 | None:intergenic | 35.0% | |
| GTTTATGCACTTCAAGTGTT+TGG | - | chr3_3:62455721-62455740 | None:intergenic | 35.0% | |
| ACTATATCAGCATGCTGTAT+AGG | + | chr3_3:62455850-62455869 | Msa0463120:intron | 35.0% | |
| GTTTCACATAATATAGGAGG+TGG | - | chr3_3:62455918-62455937 | None:intergenic | 35.0% | |
| AACATCAATGAATGATCTCC+AGG | + | chr3_3:62455947-62455966 | Msa0463120:intron | 35.0% | |
| TCATCTTCATCTTCATGCAT+TGG | - | chr3_3:62456144-62456163 | None:intergenic | 35.0% | |
| TGAAGAGGAAGATGAAGAAA+TGG | + | chr3_3:62456161-62456180 | Msa0463120:CDS | 35.0% | |
| TCAAATGGTGAACCAGAAAA+TGG | + | chr3_3:62456234-62456253 | Msa0463120:CDS | 35.0% | |
| ! | GATTTCAGCAAAGTTTTGCT+AGG | + | chr3_3:62456258-62456277 | Msa0463120:CDS | 35.0% |
| ! | CAAAGTTTTGCTAGGGATAA+AGG | + | chr3_3:62456266-62456285 | Msa0463120:CDS | 35.0% |
| ATCATACCTTGTATCTCACA+CGG | - | chr3_3:62456296-62456315 | None:intergenic | 35.0% | |
| GTGAATTTCAGACATGTTGT+CGG | + | chr3_3:62456445-62456464 | Msa0463120:intron | 35.0% | |
| TAGTGATAGAGGAAAGAGTT+TGG | + | chr3_3:62456584-62456603 | Msa0463120:intron | 35.0% | |
| AGTTTGGATCCATGTGTTTA+AGG | + | chr3_3:62456600-62456619 | Msa0463120:intron | 35.0% | |
| ACTAGTCATGTTGCATGTTT+AGG | + | chr3_3:62456646-62456665 | Msa0463120:intron | 35.0% | |
| ATGGGACAAATAAATCATGC+AGG | - | chr3_3:62456701-62456720 | None:intergenic | 35.0% | |
| AAGGATCTGCAAAGTGTATT+TGG | + | chr3_3:62456776-62456795 | Msa0463120:intron | 35.0% | |
| ! | ATACAGGATCTTATTTGCTG+GGG | - | chr3_3:62456943-62456962 | None:intergenic | 35.0% |
| ! | GATACAGGATCTTATTTGCT+GGG | - | chr3_3:62456944-62456963 | None:intergenic | 35.0% |
| ! | TCTTAGTTGAAGCATCAAGT+TGG | + | chr3_3:62457186-62457205 | Msa0463120:three_prime_UTR | 35.0% |
| GGGATTGTTCGATCTTTGAT+TGG | - | chr3_3:62451375-62451394 | None:intergenic | 40.0% | |
| GAACCATGAGAGATGCTATT+GGG | - | chr3_3:62451544-62451563 | None:intergenic | 40.0% | |
| TGAACCATGAGAGATGCTAT+TGG | - | chr3_3:62451545-62451564 | None:intergenic | 40.0% | |
| TTTCTTTGTTACAGGCATGC+TGG | + | chr3_3:62451827-62451846 | Msa0463120:intron | 40.0% | |
| ATGTCAAACAACACCAACCT+TGG | - | chr3_3:62451878-62451897 | None:intergenic | 40.0% | |
| TGTGTTGTACCCATATGACA+TGG | + | chr3_3:62452023-62452042 | Msa0463120:intron | 40.0% | |
| TGTACCCATATGACATGGTT+TGG | + | chr3_3:62452028-62452047 | Msa0463120:intron | 40.0% | |
| CAGTTCCAAACCATGTCATA+TGG | - | chr3_3:62452036-62452055 | None:intergenic | 40.0% | |
| GATGAGCAAGATCATCACAT+TGG | - | chr3_3:62452100-62452119 | None:intergenic | 40.0% | |
| TTCAGACCCCTCTTCTTTAT+AGG | + | chr3_3:62452124-62452143 | Msa0463120:intron | 40.0% | |
| ! | TCCGAAAGCATAAGCACATT+TGG | - | chr3_3:62452168-62452187 | None:intergenic | 40.0% |
| ! | CGTAGCCTATAATGGTTTGT+TGG | - | chr3_3:62452199-62452218 | None:intergenic | 40.0% |
| CGATACTCTACGAATACTCT+CGG | + | chr3_3:62452240-62452259 | Msa0463120:intron | 40.0% | |
| CTATTCTCCATCCCTATGTT+AGG | - | chr3_3:62452608-62452627 | None:intergenic | 40.0% | |
| GGTGTGAAAGTAAAACGATC+CGG | - | chr3_3:62452838-62452857 | None:intergenic | 40.0% | |
| GTAAAGATTCTTGGAAGGAG+GGG | - | chr3_3:62452986-62453005 | None:intergenic | 40.0% | |
| TTTAAAGAGGTCGGGAGAAA+TGG | - | chr3_3:62453015-62453034 | None:intergenic | 40.0% | |
| CCGACCTCTTTAAATAGAGA+AGG | + | chr3_3:62453021-62453040 | Msa0463120:intron | 40.0% | |
| !! | TCGCAACAGGGTTTTTGTTT+CGG | - | chr3_3:62453091-62453110 | None:intergenic | 40.0% |
| ! | TCTGTTAGCTCTTCTTGATC+GGG | + | chr3_3:62453239-62453258 | Msa0463120:intron | 40.0% |
| !!! | CAACAGGTTTTTTCCATCTC+CGG | - | chr3_3:62453297-62453316 | None:intergenic | 40.0% |
| !! | TCAAGCGGATTGTATAGGAA+GGG | - | chr3_3:62453320-62453339 | None:intergenic | 40.0% |
| !! | TTCAAGCGGATTGTATAGGA+AGG | - | chr3_3:62453321-62453340 | None:intergenic | 40.0% |
| !! | TGCTTTCAAGCGGATTGTAT+AGG | - | chr3_3:62453325-62453344 | None:intergenic | 40.0% |
| CAAAGTCACTTGCTTTCAAG+CGG | - | chr3_3:62453335-62453354 | None:intergenic | 40.0% | |
| AAGTGACTTTGTTCCCTCTA+AGG | + | chr3_3:62453344-62453363 | Msa0463120:CDS | 40.0% | |
| ACACGAAGTTGTTCCTTAGA+GGG | - | chr3_3:62453360-62453379 | None:intergenic | 40.0% | |
| TACACGAAGTTGTTCCTTAG+AGG | - | chr3_3:62453361-62453380 | None:intergenic | 40.0% | |
| GTGTATCTAGACGAATGCAA+AGG | + | chr3_3:62453376-62453395 | Msa0463120:CDS | 40.0% | |
| ATCAGTGAGAAAGAGGATGA+TGG | - | chr3_3:62453601-62453620 | None:intergenic | 40.0% | |
| ! | GCATAAGCATCTAAGATTCC+GGG | - | chr3_3:62453711-62453730 | None:intergenic | 40.0% |
| ! | GTATGTGAGTTGAGACTTGA+TGG | + | chr3_3:62454133-62454152 | Msa0463120:intron | 40.0% |
| AAGTCCTCACATAGTCACAT+GGG | + | chr3_3:62454194-62454213 | Msa0463120:intron | 40.0% | |
| ! | GACTCAAACTCACATCCTTT+TGG | + | chr3_3:62454223-62454242 | Msa0463120:intron | 40.0% |
| AAAGGAGAAGCAACACGTTA+TGG | - | chr3_3:62454382-62454401 | None:intergenic | 40.0% | |
| !! | TTTGTTCCACTTTTCACCGA+TGG | + | chr3_3:62454517-62454536 | Msa0463120:intron | 40.0% |
| AAAGAACCATCGGTGAAAAG+TGG | - | chr3_3:62454526-62454545 | None:intergenic | 40.0% | |
| ACCTAGGAAGAAAGAACCAT+CGG | - | chr3_3:62454536-62454555 | None:intergenic | 40.0% | |
| !! | TAAAAGAGTTGATGCCATGG+AGG | + | chr3_3:62454578-62454597 | Msa0463120:CDS | 40.0% |
| ! | TGAAGTATTTGGTTCCTCCA+TGG | - | chr3_3:62454595-62454614 | None:intergenic | 40.0% |
| !! | ATGATGGGTTGTTATGGACA+AGG | - | chr3_3:62454632-62454651 | None:intergenic | 40.0% |
| GTACACATGTTCACTGAGAA+CGG | + | chr3_3:62454747-62454766 | Msa0463120:CDS | 40.0% | |
| TACACATGTTCACTGAGAAC+GGG | + | chr3_3:62454748-62454767 | Msa0463120:CDS | 40.0% | |
| ACCAAAAGCTTCAGTCAGAA+TGG | + | chr3_3:62454794-62454813 | Msa0463120:CDS | 40.0% | |
| ! | ACCATTCTGACTGAAGCTTT+TGG | - | chr3_3:62454798-62454817 | None:intergenic | 40.0% |
| TTCAGTCAGAATGGTTTCAC+AGG | + | chr3_3:62454803-62454822 | Msa0463120:CDS | 40.0% | |
| TCAGTCAGAATGGTTTCACA+GGG | + | chr3_3:62454804-62454823 | Msa0463120:CDS | 40.0% | |
| ACCATCAAGAGATAGTGAGA+AGG | + | chr3_3:62454947-62454966 | Msa0463120:CDS | 40.0% | |
| TCCTTCTCACTATCTCTTGA+TGG | - | chr3_3:62454951-62454970 | None:intergenic | 40.0% | |
| AGAGATAGTGAGAAGGAGAA+TGG | + | chr3_3:62454954-62454973 | Msa0463120:CDS | 40.0% | |
| !! | ACATTTCTGGTCTGTCTATC+AGG | + | chr3_3:62455033-62455052 | Msa0463120:CDS | 40.0% |
| !! | CATTTCTGGTCTGTCTATCA+GGG | + | chr3_3:62455034-62455053 | Msa0463120:CDS | 40.0% |
| GCAACGAATCGTAATATTGG+AGG | + | chr3_3:62455146-62455165 | Msa0463120:CDS | 40.0% | |
| ! | AAGCTCATATCGCAGGTTTT+TGG | + | chr3_3:62455283-62455302 | Msa0463120:CDS | 40.0% |
| GATGGTAAATTAGTGGCAGT+TGG | + | chr3_3:62455395-62455414 | Msa0463120:CDS | 40.0% | |
| TGGTAAATTAGTGGCAGTTG+GGG | + | chr3_3:62455397-62455416 | Msa0463120:CDS | 40.0% | |
| AGTGATAGAAAGGCAAAGTC+TGG | - | chr3_3:62455473-62455492 | None:intergenic | 40.0% | |
| GACTTTGCCTTTCTATCACT+AGG | + | chr3_3:62455473-62455492 | Msa0463120:CDS | 40.0% | |
| GTACTTGCCTAGTGATAGAA+AGG | - | chr3_3:62455483-62455502 | None:intergenic | 40.0% | |
| CTGCTCTTCAAGAAATTGGT+TGG | + | chr3_3:62455504-62455523 | Msa0463120:CDS | 40.0% | |
| AAACTACAAGCATGGTGAAG+TGG | - | chr3_3:62455696-62455715 | None:intergenic | 40.0% | |
| ATCAATGAATGATCTCCAGG+TGG | + | chr3_3:62455950-62455969 | Msa0463120:intron | 40.0% | |
| TCAATGAATGATCTCCAGGT+GGG | + | chr3_3:62455951-62455970 | Msa0463120:intron | 40.0% | |
| AATGTCAAATGAAACCCACC+TGG | - | chr3_3:62455968-62455987 | None:intergenic | 40.0% | |
| GGGTTTCATTTGACATTGCA+AGG | + | chr3_3:62455971-62455990 | Msa0463120:CDS | 40.0% | |
| TAACGCTTTCTGTCAAGCAA+CGG | - | chr3_3:62455997-62456016 | None:intergenic | 40.0% | |
| ATCTTCAGCAACTTGAAGTG+GGG | - | chr3_3:62456064-62456083 | None:intergenic | 40.0% | |
| GATCTTCAGCAACTTGAAGT+GGG | - | chr3_3:62456065-62456084 | None:intergenic | 40.0% | |
| TGATCTTCAGCAACTTGAAG+TGG | - | chr3_3:62456066-62456085 | None:intergenic | 40.0% | |
| TCAAGACACAATGTTAAGCC+AGG | + | chr3_3:62456083-62456102 | Msa0463120:CDS | 40.0% | |
| GCATGAAGATGAAGATGAAG+AGG | + | chr3_3:62456146-62456165 | Msa0463120:CDS | 40.0% | |
| !! | TTGCTGAAATCGCCATTTTC+TGG | - | chr3_3:62456249-62456268 | None:intergenic | 40.0% |
| TCATACCTTGTATCTCACAC+GGG | - | chr3_3:62456295-62456314 | None:intergenic | 40.0% | |
| CTTAAAGCACAGGAAGTAAC+TGG | - | chr3_3:62456341-62456360 | None:intergenic | 40.0% | |
| !! | AACATTTTCTAAGGATGGCC+AGG | - | chr3_3:62456366-62456385 | None:intergenic | 40.0% |
| AAAATATCGGTAAGTAGGGG+AGG | - | chr3_3:62456540-62456559 | None:intergenic | 40.0% | |
| TTATTTGGAGGTAACCGGAT+TGG | + | chr3_3:62456558-62456577 | Msa0463120:intron | 40.0% | |
| TATTTGGAGGTAACCGGATT+GGG | + | chr3_3:62456559-62456578 | Msa0463120:intron | 40.0% | |
| ACAACAAGTCAGACCAGAAT+GGG | - | chr3_3:62456719-62456738 | None:intergenic | 40.0% | |
| TCCTTCAGATATGAATAGCG+CGG | - | chr3_3:62456761-62456780 | None:intergenic | 40.0% | |
| AGTCACAGTTGCAGAAATAC+AGG | + | chr3_3:62456822-62456841 | Msa0463120:CDS | 40.0% | |
| ACAGTTGCAGAAATACAGGA+GGG | + | chr3_3:62456826-62456845 | Msa0463120:CDS | 40.0% | |
| ! | GGATACAGGATCTTATTTGC+TGG | - | chr3_3:62456945-62456964 | None:intergenic | 40.0% |
| TTTGATCCCCATTTGTCTCT+AGG | + | chr3_3:62456981-62457000 | Msa0463120:three_prime_UTR | 40.0% | |
| TGCCATTCCTAGAGACAAAT+GGG | - | chr3_3:62456991-62457010 | None:intergenic | 40.0% | |
| ATGCCATTCCTAGAGACAAA+TGG | - | chr3_3:62456992-62457011 | None:intergenic | 40.0% | |
| CCATATTCAGCAACTAATGC+TGG | - | chr3_3:62457144-62457163 | None:intergenic | 40.0% | |
| CCAGCATTAGTTGCTGAATA+TGG | + | chr3_3:62457141-62457160 | Msa0463120:three_prime_UTR | 40.0% | |
| GAAGAATGTCGAGTACGAAG+AGG | + | chr3_3:62451425-62451444 | Msa0463120:exon | 45.0% | |
| TAGCAGTAGCAAAACCCCAA+AGG | + | chr3_3:62451456-62451475 | Msa0463120:CDS | 45.0% | |
| AGCAACAACGCTTTCCTTTG+GGG | - | chr3_3:62451473-62451492 | None:intergenic | 45.0% | |
| CAGCAACAACGCTTTCCTTT+GGG | - | chr3_3:62451474-62451493 | None:intergenic | 45.0% | |
| TCAGCAACAACGCTTTCCTT+TGG | - | chr3_3:62451475-62451494 | None:intergenic | 45.0% | |
| !! | GAAAGCGTTGTTGCTGATTG+CGG | + | chr3_3:62451478-62451497 | Msa0463120:CDS | 45.0% |
| ! | TGGGTTGTTGTTGTAGTTGG+TGG | + | chr3_3:62451678-62451697 | Msa0463120:intron | 45.0% |
| ! | CATGCTGGCATATAGCCTTA+CGG | + | chr3_3:62451842-62451861 | Msa0463120:CDS | 45.0% |
| ! | CTTGGTAGTCATACACCGTA+AGG | - | chr3_3:62451860-62451879 | None:intergenic | 45.0% |
| CTTACGGTGTATGACTACCA+AGG | + | chr3_3:62451858-62451877 | Msa0463120:CDS | 45.0% | |
| ATGCTTCACGGATATACCCT+CGG | + | chr3_3:62452333-62452352 | Msa0463120:intron | 45.0% | |
| !! | ATGGATGATGGTAATGGGAG+AGG | + | chr3_3:62452516-62452535 | Msa0463120:intron | 45.0% |
| ATCCGGGCTTCATAGACTAT+AGG | + | chr3_3:62452868-62452887 | Msa0463120:intron | 45.0% | |
| TCATAGACTATAGGCCGAGT+AGG | + | chr3_3:62452877-62452896 | Msa0463120:intron | 45.0% | |
| !! | AGTTATTAAGCCTGACTCGG+TGG | - | chr3_3:62452911-62452930 | None:intergenic | 45.0% |
| !! | CAACAGGGTTTTTGTTTCGG+TGG | - | chr3_3:62453088-62453107 | None:intergenic | 45.0% |
| ! | CTGTTAGCTCTTCTTGATCG+GGG | + | chr3_3:62453240-62453259 | Msa0463120:intron | 45.0% |
| GATTGTATAGGAAGGGCAAC+AGG | - | chr3_3:62453313-62453332 | None:intergenic | 45.0% | |
| !! | ATGTGTCACTTCCTGGTGAA+TGG | + | chr3_3:62454048-62454067 | Msa0463120:intron | 45.0% |
| ! | TTGATGGCTAACCAGAGTCA+GGG | + | chr3_3:62454149-62454168 | Msa0463120:intron | 45.0% |
| GAAGTCCTCACATAGTCACA+TGG | + | chr3_3:62454193-62454212 | Msa0463120:intron | 45.0% | |
| ! | CGAGTTGAATACCTACCAAC+TGG | + | chr3_3:62454250-62454269 | Msa0463120:intron | 45.0% |
| CGAAAATTGGTCCAGTTGGT+AGG | - | chr3_3:62454264-62454283 | None:intergenic | 45.0% | |
| CCTACGAAAATTGGTCCAGT+TGG | - | chr3_3:62454268-62454287 | None:intergenic | 45.0% | |
| ! | CCAACTGGACCAATTTTCGT+AGG | + | chr3_3:62454265-62454284 | Msa0463120:intron | 45.0% |
| GTGGCAAAGCCTACGAAAAT+TGG | - | chr3_3:62454277-62454296 | None:intergenic | 45.0% | |
| ACCGATGGTTCTTTCTTCCT+AGG | + | chr3_3:62454532-62454551 | Msa0463120:intron | 45.0% | |
| !! | TGGAGCATGATGGGTTGTTA+TGG | - | chr3_3:62454638-62454657 | None:intergenic | 45.0% |
| CTTCTGACATGGAGCATGAT+GGG | - | chr3_3:62454647-62454666 | None:intergenic | 45.0% | |
| TCTTCTGACATGGAGCATGA+TGG | - | chr3_3:62454648-62454667 | None:intergenic | 45.0% | |
| ACACATGTTCACTGAGAACG+GGG | + | chr3_3:62454749-62454768 | Msa0463120:CDS | 45.0% | |
| CAGTCAGAATGGTTTCACAG+GGG | + | chr3_3:62454805-62454824 | Msa0463120:CDS | 45.0% | |
| GGTTTCACAGGGGAAAAAGA+AGG | + | chr3_3:62454815-62454834 | Msa0463120:CDS | 45.0% | |
| CCTTGTCTCTTGACTTTGCT+CGG | - | chr3_3:62454911-62454930 | None:intergenic | 45.0% | |
| GCAAAGTCAAGAGACAAGGA+TGG | + | chr3_3:62454912-62454931 | Msa0463120:CDS | 45.0% | |
| CGATTCGTTGCAGACTTCTT+TGG | - | chr3_3:62455137-62455156 | None:intergenic | 45.0% | |
| ACACAGAAAGCTCATATCGC+AGG | + | chr3_3:62455276-62455295 | Msa0463120:CDS | 45.0% | |
| GATAACACAGTTCCTCCTTG+TGG | + | chr3_3:62455341-62455360 | Msa0463120:CDS | 45.0% | |
| ! | ACAGTTCCTCCTTGTGGTTT+TGG | + | chr3_3:62455347-62455366 | Msa0463120:CDS | 45.0% |
| AAAGAGCCAAAACCACAAGG+AGG | - | chr3_3:62455356-62455375 | None:intergenic | 45.0% | |
| TGGAAAGAGCCAAAACCACA+AGG | - | chr3_3:62455359-62455378 | None:intergenic | 45.0% | |
| TGGTTGGGTGAAAGATAACC+AGG | + | chr3_3:62455520-62455539 | Msa0463120:CDS | 45.0% | |
| GTACTGGAGACTAGGACAAT+AGG | - | chr3_3:62455546-62455565 | None:intergenic | 45.0% | |
| !! | GAGGACATAGTAGCTCTGAA+GGG | - | chr3_3:62455628-62455647 | None:intergenic | 45.0% |
| !! | AGAGGACATAGTAGCTCTGA+AGG | - | chr3_3:62455629-62455648 | None:intergenic | 45.0% |
| !! | TTAAGCCAGGTTGATGACAG+TGG | + | chr3_3:62456096-62456115 | Msa0463120:CDS | 45.0% |
| !! | GGTAAATCTTTTCGGGAGAC+AGG | - | chr3_3:62456497-62456516 | None:intergenic | 45.0% |
| ATTTGGAGGTAACCGGATTG+GGG | + | chr3_3:62456560-62456579 | Msa0463120:intron | 45.0% | |
| CTCTATCACTATCCCCAATC+CGG | - | chr3_3:62456575-62456594 | None:intergenic | 45.0% | |
| GACAACAAGTCAGACCAGAA+TGG | - | chr3_3:62456720-62456739 | None:intergenic | 45.0% | |
| ACCGCGCTATTCATATCTGA+AGG | + | chr3_3:62456757-62456776 | Msa0463120:intron | 45.0% | |
| CACAGTTGCAGAAATACAGG+AGG | + | chr3_3:62456825-62456844 | Msa0463120:CDS | 45.0% | |
| CAGAAATACAGGAGGGTTGT+CGG | + | chr3_3:62456833-62456852 | Msa0463120:CDS | 45.0% | |
| ! | TCCCCATTTGTCTCTAGGAA+TGG | + | chr3_3:62456986-62457005 | Msa0463120:three_prime_UTR | 45.0% |
| GCCATTCCTAGAGACAAATG+GGG | - | chr3_3:62456990-62457009 | None:intergenic | 45.0% | |
| !! | AAAAGATATAATATATTTAA+GGG | - | chr3_3:62453827-62453846 | None:intergenic | 5.0% |
| !! | TAAAAGATATAATATATTTA+AGG | - | chr3_3:62453828-62453847 | None:intergenic | 5.0% |
| !!! | TTTTATTTTATAACAATTAT+TGG | + | chr3_3:62455766-62455785 | Msa0463120:intron | 5.0% |
| TGAGAGATGCTATTGGGACG+AGG | - | chr3_3:62451538-62451557 | None:intergenic | 50.0% | |
| CGTCCCAATAGCATCTCTCA+TGG | + | chr3_3:62451538-62451557 | Msa0463120:CDS | 50.0% | |
| CGGTGTATGACTACCAAGGT+TGG | + | chr3_3:62451862-62451881 | Msa0463120:intron | 50.0% | |
| CCATTATAGGCTACGAAGCC+CGG | + | chr3_3:62452204-62452223 | Msa0463120:intron | 50.0% | |
| TATCGATGTCCGACACATCC+GGG | - | chr3_3:62452225-62452244 | None:intergenic | 50.0% | |
| ! | GTATCGATGTCCGACACATC+CGG | - | chr3_3:62452226-62452245 | None:intergenic | 50.0% |
| AATGGGAGAGGAGACTCACT+TGG | + | chr3_3:62452528-62452547 | Msa0463120:intron | 50.0% | |
| TCACACCCACACCATGTATC+CGG | + | chr3_3:62452851-62452870 | Msa0463120:intron | 50.0% | |
| GTCTATGAAGCCCGGATACA+TGG | - | chr3_3:62452865-62452884 | None:intergenic | 50.0% | |
| GGCCTATAGTCTATGAAGCC+CGG | - | chr3_3:62452873-62452892 | None:intergenic | 50.0% | |
| AGACTATAGGCCGAGTAGGA+TGG | + | chr3_3:62452881-62452900 | Msa0463120:intron | 50.0% | |
| CGGTGGTTAACCATCCTACT+CGG | - | chr3_3:62452894-62452913 | None:intergenic | 50.0% | |
| TCTTGGAAGGAGGGGAAGTT+AGG | - | chr3_3:62452978-62452997 | None:intergenic | 50.0% | |
| GGAAGTGACACATGTCCCAA+AGG | - | chr3_3:62454041-62454060 | None:intergenic | 50.0% | |
| !! | TTGGGACATGTGTCACTTCC+TGG | + | chr3_3:62454041-62454060 | Msa0463120:intron | 50.0% |
| ! | CTTGATGGCTAACCAGAGTC+AGG | + | chr3_3:62454148-62454167 | Msa0463120:intron | 50.0% |
| CTCAAGACTTTCCCTGACTC+TGG | - | chr3_3:62454163-62454182 | None:intergenic | 50.0% | |
| CAGAGTCAGGGAAAGTCTTG+AGG | + | chr3_3:62454161-62454180 | Msa0463120:intron | 50.0% | |
| ACTGCCCATGTGACTATGTG+AGG | - | chr3_3:62454201-62454220 | None:intergenic | 50.0% | |
| GAGAACGGGGAATTTCCATC+TGG | + | chr3_3:62454762-62454781 | Msa0463120:CDS | 50.0% | |
| TAAGAGGTCTTCGGACCCAT+TGG | - | chr3_3:62454847-62454866 | None:intergenic | 50.0% | |
| CCGAGCAAAGTCAAGAGACA+AGG | + | chr3_3:62454908-62454927 | Msa0463120:CDS | 50.0% | |
| CTGTCTATCAGGGCTTGCAA+TGG | + | chr3_3:62455044-62455063 | Msa0463120:CDS | 50.0% | |
| CTTGACCACTGTCATCAACC+TGG | - | chr3_3:62456104-62456123 | None:intergenic | 50.0% | |
| ! | CTTCCTGTGCTTTAAGCACC+TGG | + | chr3_3:62456345-62456364 | Msa0463120:intron | 50.0% |
| ! | CGGGAGACAGGAGTATGAAA+AGG | - | chr3_3:62456485-62456504 | None:intergenic | 50.0% |
| ! | CGGATTGGGGATAGTGATAG+AGG | + | chr3_3:62456573-62456592 | Msa0463120:intron | 50.0% |
| TCGTGAGCAGCAGAGATACT+TGG | + | chr3_3:62456799-62456818 | Msa0463120:CDS | 50.0% | |
| TCCAGTGTTATCCGAGCGAA+TGG | + | chr3_3:62456856-62456875 | Msa0463120:CDS | 50.0% | |
| ACCATTCGCTCGGATAACAC+TGG | - | chr3_3:62456860-62456879 | None:intergenic | 50.0% | |
| GAGAGAGTAGACCATTCGCT+CGG | - | chr3_3:62456870-62456889 | None:intergenic | 50.0% | |
| GAGCGAATGGTCTACTCTCT+CGG | + | chr3_3:62456869-62456888 | Msa0463120:CDS | 50.0% | |
| AAGATCCTGTATCCAGCAGC+TGG | + | chr3_3:62456951-62456970 | Msa0463120:three_prime_UTR | 50.0% | |
| TCAAATTCAGCTCCAGCTGC+TGG | - | chr3_3:62456966-62456985 | None:intergenic | 50.0% | |
| !! | GGAAAGCGTCGAAGCTCTTG+TGG | + | chr3_3:62451499-62451518 | Msa0463120:CDS | 55.0% |
| CCGGGCTTCGTAGCCTATAA+TGG | - | chr3_3:62452207-62452226 | None:intergenic | 55.0% | |
| CACACCCACACCATGTATCC+GGG | + | chr3_3:62452852-62452871 | Msa0463120:intron | 55.0% | |
| GAAGCCCGGATACATGGTGT+GGG | - | chr3_3:62452859-62452878 | None:intergenic | 55.0% | |
| TGAAGCCCGGATACATGGTG+TGG | - | chr3_3:62452860-62452879 | None:intergenic | 55.0% | |
| GGATGGTTAACCACCGAGTC+AGG | + | chr3_3:62452898-62452917 | Msa0463120:intron | 55.0% | |
| TAGCTCTTCTTGATCGGGGC+TGG | + | chr3_3:62453244-62453263 | Msa0463120:intron | 55.0% | |
| GGAGACTAGGACAATAGGCC+TGG | - | chr3_3:62455541-62455560 | None:intergenic | 55.0% | |
| GGGATCCCGTGTGAGATACA+AGG | + | chr3_3:62456287-62456306 | Msa0463120:CDS | 55.0% | |
| TGGCCAGGTGCTTAAAGCAC+AGG | - | chr3_3:62456351-62456370 | None:intergenic | 55.0% | |
| GCTACGAAGCCCGGATGTGT+CGG | + | chr3_3:62452213-62452232 | Msa0463120:intron | 60.0% | |
| GATCGGGGCTGGAGAAGATC+TGG | + | chr3_3:62453255-62453274 | Msa0463120:CDS | 60.0% | |
| CAGCTCCAGCTGCTGGATAC+AGG | - | chr3_3:62456959-62456978 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 62451186 | 62457251 | 62451186 | ID=Msa0463120;Name=Msa0463120 |
| chr3_3 | mRNA | 62451186 | 62457251 | 62451186 | ID=Msa0463120-mRNA-1;Parent=Msa0463120;Name=Msa0463120-mRNA-1;_AED=0.04;_eAED=0.04;_QI=244|1|1|1|1|1|6|356|626 |
| chr3_3 | exon | 62451186 | 62451559 | 62451186 | ID=Msa0463120-mRNA-1:exon:13342;Parent=Msa0463120-mRNA-1 |
| chr3_3 | exon | 62451841 | 62451879 | 62451841 | ID=Msa0463120-mRNA-1:exon:13343;Parent=Msa0463120-mRNA-1 |
| chr3_3 | exon | 62453247 | 62453397 | 62453247 | ID=Msa0463120-mRNA-1:exon:13344;Parent=Msa0463120-mRNA-1 |
| chr3_3 | exon | 62454554 | 62455657 | 62454554 | ID=Msa0463120-mRNA-1:exon:13345;Parent=Msa0463120-mRNA-1 |
| chr3_3 | exon | 62455969 | 62456308 | 62455969 | ID=Msa0463120-mRNA-1:exon:13346;Parent=Msa0463120-mRNA-1 |
| chr3_3 | exon | 62456779 | 62457251 | 62456779 | ID=Msa0463120-mRNA-1:exon:13347;Parent=Msa0463120-mRNA-1 |
| chr3_3 | five_prime_UTR | 62451186 | 62451429 | 62451186 | ID=Msa0463120-mRNA-1:five_prime_utr;Parent=Msa0463120-mRNA-1 |
| chr3_3 | CDS | 62451430 | 62451559 | 62451430 | ID=Msa0463120-mRNA-1:cds;Parent=Msa0463120-mRNA-1 |
| chr3_3 | CDS | 62451841 | 62451879 | 62451841 | ID=Msa0463120-mRNA-1:cds;Parent=Msa0463120-mRNA-1 |
| chr3_3 | CDS | 62453247 | 62453397 | 62453247 | ID=Msa0463120-mRNA-1:cds;Parent=Msa0463120-mRNA-1 |
| chr3_3 | CDS | 62454554 | 62455657 | 62454554 | ID=Msa0463120-mRNA-1:cds;Parent=Msa0463120-mRNA-1 |
| chr3_3 | CDS | 62455969 | 62456308 | 62455969 | ID=Msa0463120-mRNA-1:cds;Parent=Msa0463120-mRNA-1 |
| chr3_3 | CDS | 62456779 | 62456895 | 62456779 | ID=Msa0463120-mRNA-1:cds;Parent=Msa0463120-mRNA-1 |
| chr3_3 | three_prime_UTR | 62456896 | 62457251 | 62456896 | ID=Msa0463120-mRNA-1:three_prime_utr;Parent=Msa0463120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
