Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0373880 | XP_003601923.1 | 97.917 | 720 | 15 | 0 | 1 | 720 | 1 | 720 | 0.0 | 1460 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0373880 | sp|Q54Q92|LMD2A_DICDI | 29.293 | 495 | 320 | 12 | 55 | 541 | 110 | 582 | 9.98e-52 | 195 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0373880 | G7J381 | 97.917 | 720 | 15 | 0 | 1 | 720 | 1 | 720 | 0.0 | 1460 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000910 | Msa0373880 | 0.810569 | 1.080027e-50 | -8.615850e-47 |
Msa0002560 | Msa0373880 | 0.843325 | 1.502137e-58 | -8.615850e-47 |
Msa0003220 | Msa0373880 | 0.807493 | 4.919973e-50 | -8.615850e-47 |
Msa0047640 | Msa0373880 | 0.821240 | 4.484824e-53 | -8.615850e-47 |
Msa0089980 | Msa0373880 | 0.812578 | 3.951677e-51 | -8.615850e-47 |
Msa0090010 | Msa0373880 | 0.806704 | 7.229876e-50 | -8.615850e-47 |
Msa0106620 | Msa0373880 | 0.851659 | 7.686154e-61 | -8.615850e-47 |
Msa0106710 | Msa0373880 | 0.828661 | 7.941583e-55 | -8.615850e-47 |
Msa0124320 | Msa0373880 | 0.821593 | 3.718283e-53 | -8.615850e-47 |
Msa0143850 | Msa0373880 | 0.806549 | 7.795323e-50 | -8.615850e-47 |
Msa0206330 | Msa0373880 | 0.805706 | 1.172713e-49 | -8.615850e-47 |
Msa0237200 | Msa0373880 | 0.801136 | 1.038363e-48 | -8.615850e-47 |
Msa0237300 | Msa0373880 | 0.801933 | 7.127291e-49 | -8.615850e-47 |
Msa0373880 | Msa0376020 | 0.843080 | 1.745211e-58 | -8.615850e-47 |
Msa0373880 | Msa0378970 | 0.804273 | 2.338283e-49 | -8.615850e-47 |
Msa0373880 | Msa0382370 | 0.818953 | 1.497562e-52 | -8.615850e-47 |
Msa0373880 | Msa0395980 | 0.817003 | 4.129898e-52 | -8.615850e-47 |
Msa0373880 | Msa0403490 | 0.803438 | 3.486290e-49 | -8.615850e-47 |
Msa0373880 | Msa0416960 | 0.809011 | 2.336186e-50 | -8.615850e-47 |
Msa0373880 | Msa0423030 | 0.980162 | 1.377582e-149 | -8.615850e-47 |
Msa0373880 | Msa0432160 | 0.812949 | 3.276759e-51 | -8.615850e-47 |
Msa0373880 | Msa0434570 | 0.806853 | 6.721449e-50 | -8.615850e-47 |
Msa0373880 | Msa0440510 | 0.823065 | 1.692523e-53 | -8.615850e-47 |
Msa0373880 | Msa0463120 | 0.802227 | 6.199015e-49 | -8.615850e-47 |
Msa0373880 | Msa0468250 | 0.825920 | 3.602063e-54 | -8.615850e-47 |
Msa0373880 | Msa0476680 | 0.812288 | 4.571629e-51 | -8.615850e-47 |
Msa0373880 | Msa0482940 | 0.832126 | 1.129429e-55 | -8.615850e-47 |
Msa0373880 | Msa0491000 | 0.833808 | 4.310045e-56 | -8.615850e-47 |
Msa0373880 | Msa0516020 | 0.843476 | 1.368869e-58 | -8.615850e-47 |
Msa0373880 | Msa0521010 | 0.812574 | 3.959202e-51 | -8.615850e-47 |
Msa0373880 | Msa0531250 | 0.808435 | 3.101122e-50 | -8.615850e-47 |
Msa0373880 | Msa0534980 | 0.811631 | 6.357764e-51 | -8.615850e-47 |
Msa0373880 | Msa0544170 | 0.819535 | 1.103754e-52 | -8.615850e-47 |
Msa0373880 | Msa0544730 | 0.823966 | 1.042093e-53 | -8.615850e-47 |
Msa0373880 | Msa0572750 | 0.807904 | 4.024758e-50 | -8.615850e-47 |
Msa0373880 | Msa0588090 | 0.806949 | 6.415396e-50 | -8.615850e-47 |
Msa0373880 | Msa0597770 | 0.803980 | 2.691069e-49 | -8.615850e-47 |
Msa0373880 | Msa0600070 | 0.803800 | 2.931876e-49 | -8.615850e-47 |
Msa0373880 | Msa0606080 | 0.803472 | 3.429756e-49 | -8.615850e-47 |
Msa0373880 | Msa0608270 | 0.808724 | 2.691105e-50 | -8.615850e-47 |
Msa0373880 | Msa0616450 | 0.823500 | 1.339651e-53 | -8.615850e-47 |
Msa0373880 | Msa0623990 | 0.806966 | 6.364442e-50 | -8.615850e-47 |
Msa0373880 | Msa0626270 | 0.800255 | 1.570191e-48 | -8.615850e-47 |
Msa0373880 | Msa0628420 | 0.803987 | 2.681533e-49 | -8.615850e-47 |
Msa0373880 | Msa0647030 | 0.805776 | 1.133885e-49 | -8.615850e-47 |
Msa0373880 | Msa0648830 | 0.814432 | 1.545637e-51 | -8.615850e-47 |
Msa0373880 | Msa0651560 | 0.841337 | 5.050538e-58 | -8.615850e-47 |
Msa0373880 | Msa0652690 | 0.802113 | 6.544888e-49 | -8.615850e-47 |
Msa0373880 | Msa0655920 | 0.822694 | 2.065517e-53 | -8.615850e-47 |
Msa0373880 | Msa0698100 | 0.824011 | 1.016880e-53 | -8.615850e-47 |
Msa0373880 | Msa0743530 | 0.823228 | 1.551035e-53 | -8.615850e-47 |
Msa0373880 | Msa0789560 | 0.830456 | 2.907069e-55 | -8.615850e-47 |
Msa0373880 | Msa0791090 | 0.820362 | 7.138456e-53 | -8.615850e-47 |
Msa0373880 | Msa0855870 | 0.809987 | 1.441920e-50 | -8.615850e-47 |
Msa0373880 | Msa0934140 | 0.801420 | 9.080007e-49 | -8.615850e-47 |
Msa0373880 | Msa0945240 | 0.801590 | 8.381402e-49 | -8.615850e-47 |
Msa0373880 | Msa0959520 | 0.805816 | 1.112183e-49 | -8.615850e-47 |
Msa0373880 | Msa0971650 | 0.800353 | 1.499517e-48 | -8.615850e-47 |
Msa0373880 | Msa0985180 | 0.807764 | 4.309849e-50 | -8.615850e-47 |
Msa0373880 | Msa0985220 | 0.828424 | 9.059375e-55 | -8.615850e-47 |
Msa0373880 | Msa0995370 | 0.811841 | 5.721922e-51 | -8.615850e-47 |
Msa0373880 | Msa1088410 | 0.812601 | 3.905080e-51 | -8.615850e-47 |
Msa0373880 | Msa1123350 | 0.802982 | 4.332365e-49 | -8.615850e-47 |
Msa0373880 | Msa1127430 | 0.803413 | 3.528445e-49 | -8.615850e-47 |
Msa0373880 | Msa1133590 | 0.815726 | 7.974064e-52 | -8.615850e-47 |
Msa0373880 | Msa1188180 | 0.843224 | 1.598027e-58 | -8.615850e-47 |
Msa0373880 | Msa1201640 | 0.814488 | 1.501664e-51 | -8.615850e-47 |
Msa0373880 | Msa1208790 | 0.803408 | 3.536640e-49 | -8.615850e-47 |
Msa0373880 | Msa1209190 | 0.802634 | 5.110968e-49 | -8.615850e-47 |
Msa0373880 | Msa1211340 | 0.810978 | 8.808165e-51 | -8.615850e-47 |
Msa0373880 | Msa1234620 | 0.820738 | 5.853765e-53 | -8.615850e-47 |
Msa0373880 | Msa1259640 | 0.804120 | 2.515462e-49 | -8.615850e-47 |
Msa0373880 | Msa1276970 | 0.806066 | 9.850929e-50 | -8.615850e-47 |
Msa0373880 | Msa1283740 | 0.843878 | 1.068798e-58 | -8.615850e-47 |
Msa0373880 | Msa1329790 | 0.817871 | 2.633327e-52 | -8.615850e-47 |
Msa0373880 | Msa1340200 | 0.810574 | 1.077187e-50 | -8.615850e-47 |
Msa0373880 | Msa1344310 | 0.808073 | 3.705326e-50 | -8.615850e-47 |
Msa0373880 | Msa1360020 | 0.801234 | 9.914065e-49 | -8.615850e-47 |
Msa0373880 | Msa1366550 | 0.817025 | 4.084414e-52 | -8.615850e-47 |
Msa0373880 | Msa1369920 | -0.814904 | 1.214841e-51 | -8.615850e-47 |
Msa0373880 | Msa1370590 | 0.830039 | 3.675811e-55 | -8.615850e-47 |
Msa0373880 | Msa1373850 | 0.806651 | 7.418245e-50 | -8.615850e-47 |
Msa0373880 | Msa1378410 | 0.805570 | 1.252397e-49 | -8.615850e-47 |
Msa0373880 | Msa1384100 | 0.832626 | 8.492238e-56 | -8.615850e-47 |
Msa0373880 | Msa1391720 | 0.801933 | 7.127291e-49 | -8.615850e-47 |
Msa0373880 | Msa1393820 | 0.814614 | 1.408323e-51 | -8.615850e-47 |
Msa0373880 | Msa1411000 | 0.811205 | 7.865926e-51 | -8.615850e-47 |
Msa0373880 | Msa1411950 | 0.800307 | 1.532648e-48 | -8.615850e-47 |
Msa0373880 | Msa1433700 | 0.814088 | 1.841027e-51 | -8.615850e-47 |
Msa0373880 | Msa1444120 | 0.830628 | 2.638244e-55 | -8.615850e-47 |
Msa0373880 | Msa1446080 | 0.804835 | 1.785396e-49 | -8.615850e-47 |
Msa0373880 | Msa1448490 | 0.835531 | 1.589282e-56 | -8.615850e-47 |
Msa0373880 | Msa1463030 | 0.810370 | 1.192355e-50 | -8.615850e-47 |
Msa0244970 | Msa0373880 | 0.833361 | 5.573245e-56 | -8.615850e-47 |
Msa0244980 | Msa0373880 | 0.816156 | 6.394931e-52 | -8.615850e-47 |
Msa0249310 | Msa0373880 | 0.815811 | 7.636037e-52 | -8.615850e-47 |
Msa0274970 | Msa0373880 | 0.800108 | 1.682391e-48 | -8.615850e-47 |
Msa0279850 | Msa0373880 | 0.800794 | 1.219236e-48 | -8.615850e-47 |
Msa0287790 | Msa0373880 | 0.815126 | 1.084749e-51 | -8.615850e-47 |
Msa0315680 | Msa0373880 | 0.804047 | 2.605031e-49 | -8.615850e-47 |
Msa0321690 | Msa0373880 | 0.832967 | 6.986399e-56 | -8.615850e-47 |
Msa0358400 | Msa0373880 | 0.808322 | 3.278651e-50 | -8.615850e-47 |
Msa0362890 | Msa0373880 | 0.827840 | 1.252785e-54 | -8.615850e-47 |
Msa0363060 | Msa0373880 | 0.809356 | 1.970397e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0373880 | MtrunA17_Chr3g0123731 | 97.917 | 720 | 15 | 0 | 1 | 720 | 1 | 720 | 0.0 | 1460 |
Msa0373880 | MtrunA17_Chr8g0381781 | 80.028 | 721 | 138 | 4 | 1 | 718 | 1 | 718 | 0.0 | 1206 |
Msa0373880 | MtrunA17_Chr4g0050171 | 73.650 | 463 | 120 | 2 | 1 | 462 | 1 | 462 | 0.0 | 715 |
Msa0373880 | MtrunA17_Chr4g0050161 | 48.047 | 256 | 103 | 9 | 464 | 709 | 1 | 236 | 1.86e-57 | 195 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0373880 | AT5G65290.1 | 71.196 | 736 | 190 | 9 | 1 | 720 | 1 | 730 | 0.0 | 1039 |
Msa0373880 | AT5G65290.2 | 78.519 | 540 | 110 | 3 | 1 | 536 | 1 | 538 | 0.0 | 870 |
Find 206 sgRNAs with CRISPR-Local
Find 720 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GACAACGCCGTCCCTTTATT+TGG | 0.138899 | 3_1:-73011415 | Msa0373880:CDS |
TTCTCGTCCCTGCTGATATT+TGG | 0.160912 | 3_1:-73020123 | Msa0373880:CDS |
CATCACTGTACAAGATAATT+TGG | 0.177518 | 3_1:+73010298 | None:intergenic |
AAACCACAAGGCGGGCAATT+AGG | 0.191717 | 3_1:-73016692 | Msa0373880:CDS |
TCAAATATAGTTTCTTTATT+AGG | 0.194715 | 3_1:+73012114 | None:intergenic |
GTTACTGGTGCATTTCTTCT+TGG | 0.201801 | 3_1:-73017674 | Msa0373880:CDS |
ATGGAGGTATTTCTTTCTTT+TGG | 0.213086 | 3_1:-73019250 | Msa0373880:CDS |
GGTGCATTTCTTCTTGGTTT+TGG | 0.219379 | 3_1:-73017668 | Msa0373880:CDS |
TGACCTTTCCGCCGACTCTA+TGG | 0.219519 | 3_1:-73010124 | Msa0373880:three_prime_UTR |
GTTAACTGAGCTGGTTTGTC+TGG | 0.226512 | 3_1:+73012317 | None:intergenic |
CAAAATTTATCCGCTTATTA+TGG | 0.237697 | 3_1:-73011380 | Msa0373880:CDS |
TATTATTTGCAGAATTCTTT+TGG | 0.241151 | 3_1:-73013579 | Msa0373880:intron |
ATGACTTGCTCAAATACTTT+TGG | 0.241273 | 3_1:-73017701 | Msa0373880:CDS |
TGTCTCTTCATCCATAGTTT+TGG | 0.243444 | 3_1:+73010783 | None:intergenic |
AACCACAAGGCGGGCAATTA+GGG | 0.255023 | 3_1:-73016691 | Msa0373880:CDS |
AGTATTGATTCTAACTTCTA+AGG | 0.263840 | 3_1:+73010153 | None:intergenic |
CATCTTCAAAACCTTGAATA+AGG | 0.267615 | 3_1:+73018631 | None:intergenic |
TTAAACCTGTCCCCAAATAA+AGG | 0.272474 | 3_1:+73011403 | None:intergenic |
CGCCTTGAAGAGGTCAAAAT+TGG | 0.276941 | 3_1:+73020404 | None:intergenic |
ACAACGCCGTCCCTTTATTT+GGG | 0.282924 | 3_1:-73011414 | Msa0373880:CDS |
CTCGCATCAGCGCCACCTCT+TGG | 0.288446 | 3_1:+73020379 | None:intergenic |
AGCAAGTACGCTGCAATTAG+AGG | 0.298768 | 3_1:-73010727 | Msa0373880:CDS |
TGAGGAAGTTGTATGATATA+GGG | 0.300928 | 3_1:+73012154 | None:intergenic |
AGTTTGTTGCCACCGCGTTT+TGG | 0.301714 | 3_1:+73020454 | None:intergenic |
TCTCGTCCCTGCTGATATTT+GGG | 0.304058 | 3_1:-73020122 | Msa0373880:CDS |
CAAAACTGAAGCAGAGGATA+TGG | 0.304694 | 3_1:-73011278 | Msa0373880:CDS |
TGCAGCGTACTTGCTGCTTA+TGG | 0.304776 | 3_1:+73010735 | None:intergenic |
ATACAGGTGTAAAGTGTTAT+TGG | 0.305810 | 3_1:-73010336 | Msa0373880:three_prime_UTR |
AATGATGAATATCATCAAAA+AGG | 0.323079 | 3_1:+73010369 | None:intergenic |
GGGATCCTTATTTAATACTT+TGG | 0.324766 | 3_1:-73015922 | Msa0373880:CDS |
AAGCAGGAGTGGGAGCCTTA+TGG | 0.325612 | 3_1:-73017732 | Msa0373880:intron |
GGATCCTTATTTAATACTTT+GGG | 0.327645 | 3_1:-73015921 | Msa0373880:intron |
TTGAGGAAGTTGTATGATAT+AGG | 0.327982 | 3_1:+73012153 | None:intergenic |
TACTACTCTTTGTTCAAAAT+CGG | 0.331193 | 3_1:-73012366 | Msa0373880:CDS |
CAATAGCATTGGAAAGTTCT+TGG | 0.333733 | 3_1:+73017537 | None:intergenic |
CATCCAGTTTGACAGCCATT+TGG | 0.337713 | 3_1:+73017567 | None:intergenic |
TGGAGCACCATCTTCGGGTT+TGG | 0.340533 | 3_1:-73010608 | Msa0373880:CDS |
ATCCAGTTTGACAGCCATTT+GGG | 0.348188 | 3_1:+73017568 | None:intergenic |
ATTACCCAAAGTATTAAATA+AGG | 0.349352 | 3_1:+73015917 | None:intergenic |
TTCAGCTGGAGCACCATCTT+CGG | 0.350183 | 3_1:-73010614 | Msa0373880:CDS |
CGGAGGTATATCCAAAACTA+TGG | 0.350526 | 3_1:-73010794 | Msa0373880:CDS |
TGCCCAAATGGCTGTCAAAC+TGG | 0.351462 | 3_1:-73017570 | Msa0373880:CDS |
AGCACCATTCCCGTTGTTAG+AGG | 0.360366 | 3_1:+73020238 | None:intergenic |
CTTGAACAAGGGCGCAAAAT+CGG | 0.364439 | 3_1:-73011079 | Msa0373880:CDS |
TATGGTTACATACACCGTTT+TGG | 0.368794 | 3_1:-73011362 | Msa0373880:CDS |
TTGAACAAGGGCGCAAAATC+GGG | 0.378695 | 3_1:-73011078 | Msa0373880:CDS |
GCAATTAGGGGAAAATGATA+TGG | 0.380335 | 3_1:-73016678 | Msa0373880:CDS |
TCAGCTGGAGCACCATCTTC+GGG | 0.382820 | 3_1:-73010613 | Msa0373880:CDS |
AGCAGGGACGAGAATGATAA+TGG | 0.384683 | 3_1:+73020132 | None:intergenic |
ATCTTCAAAACCTTGAATAA+GGG | 0.385541 | 3_1:+73018632 | None:intergenic |
GTGAAATTCCTAAAAGCATC+TGG | 0.388838 | 3_1:-73017640 | Msa0373880:CDS |
ACAAAGCTAAAGCAGCTATA+TGG | 0.389333 | 3_1:+73010050 | None:intergenic |
TATGAACGCCGCAAGTCAAC+TGG | 0.391408 | 3_1:-73016116 | Msa0373880:CDS |
TTCCCACAAAATTGCCCAAA+TGG | 0.393163 | 3_1:-73017582 | Msa0373880:CDS |
AGCAGAGGATATGGATGGTT+TGG | 0.400479 | 3_1:-73011269 | Msa0373880:CDS |
ACATCTGCTTGGAAGTTGCT+TGG | 0.405047 | 3_1:+73016892 | None:intergenic |
CAACGGACTTGATATTGAAT+CGG | 0.409675 | 3_1:-73011023 | Msa0373880:CDS |
AGCAGGAGTGGGAGCCTTAT+GGG | 0.410727 | 3_1:-73017731 | Msa0373880:intron |
GCTGTGGCACCCCTTATTCA+AGG | 0.413324 | 3_1:-73018642 | Msa0373880:CDS |
CCTGTTCGGACTGGCAAGTT+GGG | 0.417625 | 3_1:-73015942 | Msa0373880:CDS |
TCGTCAATAACATTCATATA+AGG | 0.419796 | 3_1:+73016849 | None:intergenic |
CATCTGCTTGGAAGTTGCTT+GGG | 0.419895 | 3_1:+73016893 | None:intergenic |
CAGCCTAAAGATGAAAAGAT+AGG | 0.420719 | 3_1:-73010231 | Msa0373880:three_prime_UTR |
TATCTAATTGTGGGATCCAT+TGG | 0.421566 | 3_1:-73018549 | Msa0373880:CDS |
TGACGATATGCTTACTCAAA+TGG | 0.422170 | 3_1:-73016832 | Msa0373880:intron |
TTCATCAAGCGCAGAATAAG+AGG | 0.422203 | 3_1:+73010657 | None:intergenic |
CTTGGTCTTCTATCTAATTG+TGG | 0.424052 | 3_1:-73018559 | Msa0373880:CDS |
ATTGGAGTTTAAAGTCTGAA+TGG | 0.424541 | 3_1:+73020422 | None:intergenic |
TATCTATGATTGCAGCGAAT+GGG | 0.425215 | 3_1:-73011445 | Msa0373880:intron |
CTAAACTAAGGCGTCATCTT+CGG | 0.426988 | 3_1:-73016628 | Msa0373880:CDS |
CCTCGTCATTGTAAGTAACT+TGG | 0.428128 | 3_1:+73010419 | None:intergenic |
TTCTTCTTCAGTAATTAAAT+CGG | 0.439054 | 3_1:+73010819 | None:intergenic |
CAGAGTTTCAAGTCCAACAT+AGG | 0.440272 | 3_1:-73010553 | Msa0373880:CDS |
CCGCCTTGTGGTTTGAATGA+AGG | 0.440418 | 3_1:+73016701 | None:intergenic |
TTGGAGTTTAAAGTCTGAAT+GGG | 0.444842 | 3_1:+73020423 | None:intergenic |
CCCAACTTGCCAGTCCGAAC+AGG | 0.446107 | 3_1:+73015942 | None:intergenic |
AGCACGTATCTAGGAACATC+TGG | 0.446451 | 3_1:+73020190 | None:intergenic |
CCGTCCCTTTATTTGGGGAC+AGG | 0.447195 | 3_1:-73011408 | Msa0373880:CDS |
GATGAAGAGACAAGGAGATA+TGG | 0.447213 | 3_1:-73010772 | Msa0373880:CDS |
ATCTCGCTTCCTCTAACAAC+GGG | 0.449941 | 3_1:-73020247 | Msa0373880:CDS |
AACGGACTTGATATTGAATC+GGG | 0.450684 | 3_1:-73011022 | Msa0373880:CDS |
TTGGTCTTCTATCTAATTGT+GGG | 0.454361 | 3_1:-73018558 | Msa0373880:CDS |
TTAAGGAAACAAGTTGAGAA+AGG | 0.458142 | 3_1:-73013547 | Msa0373880:CDS |
TTCTTCTCATTATGATGCAC+AGG | 0.460422 | 3_1:-73018512 | Msa0373880:CDS |
TCTTATTCTGCGCTTGATGA+AGG | 0.462589 | 3_1:-73010655 | Msa0373880:CDS |
TTATCGTATCTTCCAACTCA+AGG | 0.467532 | 3_1:+73016144 | None:intergenic |
CAGATGCACATGTACATTAG+TGG | 0.471011 | 3_1:+73012393 | None:intergenic |
CATAAGTAAGTTAACTGAGC+TGG | 0.472174 | 3_1:+73012308 | None:intergenic |
TAAAGAAACTATATTTGAAA+AGG | 0.474544 | 3_1:-73012109 | Msa0373880:intron |
TTTCATCTTTAGGCTGCAAT+GGG | 0.475122 | 3_1:+73010238 | None:intergenic |
TAAGTAACTTGGTTCAAAGA+TGG | 0.475479 | 3_1:+73010430 | None:intergenic |
GACTAGTGTGCATGTTAACT+TGG | 0.477495 | 3_1:-73018577 | Msa0373880:CDS |
TTGTTAGAGGAAGCGAGATC+AGG | 0.477817 | 3_1:+73020251 | None:intergenic |
TGAGTATATAACTTATGTAC+TGG | 0.479540 | 3_1:-73016171 | Msa0373880:CDS |
TAAACCTGTCCCCAAATAAA+GGG | 0.479597 | 3_1:+73011404 | None:intergenic |
ATCATTTGGCAAGAGCATAC+AGG | 0.480713 | 3_1:-73010352 | Msa0373880:three_prime_UTR |
CAAATTATCTTGTACAGTGA+TGG | 0.485607 | 3_1:-73010297 | Msa0373880:three_prime_UTR |
AGAGTTTCAAGTCCAACATA+GGG | 0.488494 | 3_1:-73010552 | Msa0373880:CDS |
ATCCCGCTTGGACATCTGCT+TGG | 0.488961 | 3_1:+73016881 | None:intergenic |
GCGCAAAATCGGGGAAGAGC+AGG | 0.491919 | 3_1:-73011068 | Msa0373880:CDS |
GAGGAAGTTGTATGATATAG+GGG | 0.492511 | 3_1:+73012155 | None:intergenic |
CAACGCCGTCCCTTTATTTG+GGG | 0.494059 | 3_1:-73011413 | Msa0373880:CDS |
TTAATTACTGAAGAAGAAAA+CGG | 0.496066 | 3_1:-73010814 | Msa0373880:CDS |
GCATCTGGAGAAATGCTGAT+TGG | 0.499524 | 3_1:-73017625 | Msa0373880:CDS |
TCCCCTAATTGCCCGCCTTG+TGG | 0.501900 | 3_1:+73016689 | None:intergenic |
ACCTGTTCGGACTGGCAAGT+TGG | 0.503123 | 3_1:-73015943 | Msa0373880:CDS |
CCTCTTGGCGCGCCTTGAAG+AGG | 0.503470 | 3_1:+73020394 | None:intergenic |
ATCACTTACAACAATAGCAT+TGG | 0.505667 | 3_1:+73017526 | None:intergenic |
GTACGCTGCAATTAGAGGGC+AGG | 0.507649 | 3_1:-73010722 | Msa0373880:CDS |
TCATTATGATGCACAGGACC+TGG | 0.509715 | 3_1:-73018506 | Msa0373880:intron |
TTAACTGAGCTGGTTTGTCT+GGG | 0.512639 | 3_1:+73012318 | None:intergenic |
ACGGCAAACACAGGAAAATA+CGG | 0.512908 | 3_1:-73010509 | Msa0373880:CDS |
TGTAAAATAATTAGTCCGGA+TGG | 0.513683 | 3_1:+73011244 | None:intergenic |
TATAAAATCCGTTCGAACAC+AGG | 0.517451 | 3_1:-73013431 | Msa0373880:CDS |
AGGAGTATTATAGATACAAA+AGG | 0.519923 | 3_1:-73016595 | Msa0373880:intron |
AAGTCATGGCAAATCCCATA+AGG | 0.521001 | 3_1:+73017717 | None:intergenic |
AAATTATCTTGTACAGTGAT+GGG | 0.522109 | 3_1:-73010296 | Msa0373880:three_prime_UTR |
TGAATATATGAATCCAAGCC+AGG | 0.522345 | 3_1:+73009984 | None:intergenic |
ACGGTGAAAAGCACGTATCT+AGG | 0.525843 | 3_1:+73020181 | None:intergenic |
CCGCCGACTCTATGGGAACA+TGG | 0.526085 | 3_1:-73010116 | Msa0373880:three_prime_UTR |
GACCTTTCCGCCGACTCTAT+GGG | 0.526531 | 3_1:-73010123 | Msa0373880:three_prime_UTR |
CTTCGGGTTTGGCTTCGACA+TGG | 0.526937 | 3_1:-73010597 | Msa0373880:CDS |
ATAGCTTCTCACAATGAGAA+TGG | 0.527440 | 3_1:-73019269 | Msa0373880:CDS |
TTCACGTTGAGGTACTTCGC+TGG | 0.527462 | 3_1:-73020214 | Msa0373880:CDS |
TAATCGCGTTTGTGTGTGAA+AGG | 0.528663 | 3_1:-73020299 | Msa0373880:five_prime_UTR |
GATCTCGCTTCCTCTAACAA+CGG | 0.537993 | 3_1:-73020248 | Msa0373880:CDS |
GACCGAGGCGAATGAGATTG+AGG | 0.539105 | 3_1:+73012136 | None:intergenic |
AGTAATTCTAGAAATTCAGC+TGG | 0.539123 | 3_1:-73010628 | Msa0373880:CDS |
AGAAGTCAATGGCTAAACTA+AGG | 0.542357 | 3_1:-73016640 | Msa0373880:CDS |
TATCGTATCTTCCAACTCAA+GGG | 0.546729 | 3_1:+73016145 | None:intergenic |
ATGGATGGTTTGGATCCATC+CGG | 0.547244 | 3_1:-73011259 | Msa0373880:CDS |
ATTCAAGCATCAGACCTGTT+CGG | 0.547965 | 3_1:-73015956 | Msa0373880:CDS |
TTCCTCAATCTCATTCGCCT+CGG | 0.548073 | 3_1:-73012138 | Msa0373880:CDS |
AAAGGGAGAAAGAGAGATGT+GGG | 0.550225 | 3_1:-73020281 | Msa0373880:exon |
TGTACTGGAAGCCCTTGAGT+TGG | 0.550473 | 3_1:-73016156 | Msa0373880:CDS |
AACACAGGAGCTACTTGTGC+AGG | 0.550794 | 3_1:-73013416 | Msa0373880:intron |
ATGAAAAGATAGGCTACTAC+AGG | 0.551564 | 3_1:-73010221 | Msa0373880:three_prime_UTR |
AGCATCAGACCTGTTCGGAC+TGG | 0.552727 | 3_1:-73015951 | Msa0373880:CDS |
GAGCGGTCTTGGCTTGAACA+AGG | 0.552878 | 3_1:-73011091 | Msa0373880:CDS |
GTCGAAGCCAAACCCGAAGA+TGG | 0.553952 | 3_1:+73010601 | None:intergenic |
TACAATGACGAGGATTAAGA+TGG | 0.555603 | 3_1:-73010409 | Msa0373880:exon |
AGTACCGCCCAAATATCAGC+AGG | 0.559037 | 3_1:+73020115 | None:intergenic |
TACGCTGCAATTAGAGGGCA+GGG | 0.559127 | 3_1:-73010721 | Msa0373880:CDS |
CTTCAAGGCGCGCCAAGAGG+TGG | 0.559778 | 3_1:-73020391 | Msa0373880:five_prime_UTR |
CCGTTGAAATTCCTAGCAAG+TGG | 0.563702 | 3_1:+73011040 | None:intergenic |
CAGGAAAATACGGTCTCTCG+TGG | 0.565236 | 3_1:-73010499 | Msa0373880:CDS |
GAAGTTGCTTGCAACCAAAA+CGG | 0.565444 | 3_1:+73011348 | None:intergenic |
ATCTATGATTGCAGCGAATG+GGG | 0.568014 | 3_1:-73011444 | Msa0373880:intron |
GCAAGTACGCTGCAATTAGA+GGG | 0.570104 | 3_1:-73010726 | Msa0373880:CDS |
CTTCATTCAAACCACAAGGC+GGG | 0.573322 | 3_1:-73016700 | Msa0373880:CDS |
TGACACAGATGAGAAGTCAA+TGG | 0.574831 | 3_1:-73016651 | Msa0373880:CDS |
AGCAGGTTGTTCCACTTGCT+AGG | 0.574893 | 3_1:-73011051 | Msa0373880:CDS |
TCTTCAAAACCTTGAATAAG+GGG | 0.580909 | 3_1:+73018633 | None:intergenic |
ACGAGGATTAAGATGGAAGC+CGG | 0.581615 | 3_1:-73010402 | Msa0373880:exon |
AAGTAGCTCCTGTGTTCGAA+CGG | 0.584062 | 3_1:+73013423 | None:intergenic |
AATAATTCCGAAAAGACCAA+TGG | 0.585598 | 3_1:+73018533 | None:intergenic |
TTCCAAGCAGATGTCCAAGC+GGG | 0.587731 | 3_1:-73016883 | Msa0373880:CDS |
GTGGGAAAGAACTTTCTGGC+GGG | 0.588522 | 3_1:+73017598 | None:intergenic |
GTATTTCTTCAGGAGAGGAA+CGG | 0.591443 | 3_1:-73010862 | Msa0373880:intron |
AATCGCGTTTGTGTGTGAAA+GGG | 0.593753 | 3_1:-73020298 | Msa0373880:five_prime_UTR |
ACATGGCAAACAATGAAGAC+AGG | 0.594497 | 3_1:-73010580 | Msa0373880:CDS |
CCACTTGCTAGGAATTTCAA+CGG | 0.597233 | 3_1:-73011040 | Msa0373880:CDS |
AAAAGTATTTGAGCAAGTCA+TGG | 0.600122 | 3_1:+73017703 | None:intergenic |
TTCCCATAGAGTCGGCGGAA+AGG | 0.601878 | 3_1:+73010121 | None:intergenic |
AGCGGTCTTGGCTTGAACAA+GGG | 0.602451 | 3_1:-73011090 | Msa0373880:CDS |
AGGTCTCAAAGGATCCCGCT+TGG | 0.604904 | 3_1:+73016869 | None:intergenic |
TTTACCCCTACGGCAAACAC+AGG | 0.604921 | 3_1:-73010518 | Msa0373880:CDS |
CGTCCCTGCTGATATTTGGG+CGG | 0.611244 | 3_1:-73020119 | Msa0373880:intron |
TCATCTTCGGAATGCTCGTG+AGG | 0.613725 | 3_1:-73016615 | Msa0373880:CDS |
TAGTTTCTTTATTAGGACCG+AGG | 0.614327 | 3_1:+73012121 | None:intergenic |
ACATTCATATAAGGTCTCAA+AGG | 0.619065 | 3_1:+73016858 | None:intergenic |
CCAAGTTACTTACAATGACG+AGG | 0.620005 | 3_1:-73010419 | Msa0373880:CDS |
GCTTCCTCTAACAACGGGAA+TGG | 0.622110 | 3_1:-73020242 | Msa0373880:CDS |
CTGCAATTAGAGGGCAGGGT+GGG | 0.622483 | 3_1:-73010717 | Msa0373880:CDS |
AAAAGCGATAGATCAATGCT+AGG | 0.623744 | 3_1:+73013463 | None:intergenic |
CCTCTTCAAGGCGCGCCAAG+AGG | 0.624523 | 3_1:-73020394 | Msa0373880:five_prime_UTR |
CAAACCATCCAGTTGACTTG+CGG | 0.625928 | 3_1:+73016108 | None:intergenic |
TGAACAAGGGCGCAAAATCG+GGG | 0.626860 | 3_1:-73011077 | Msa0373880:CDS |
ACCACAAGGCGGGCAATTAG+GGG | 0.627913 | 3_1:-73016690 | Msa0373880:CDS |
AACTTGTAAACGTTACTGAA+CGG | 0.628334 | 3_1:+73020568 | None:intergenic |
GAAAGGGAGAAAGAGAGATG+TGG | 0.630616 | 3_1:-73020282 | Msa0373880:exon |
CCATGTTCCCATAGAGTCGG+CGG | 0.631054 | 3_1:+73010116 | None:intergenic |
GAACCATGTTCCCATAGAGT+CGG | 0.631380 | 3_1:+73010113 | None:intergenic |
AGGAAGTTGTATGATATAGG+GGG | 0.634202 | 3_1:+73012156 | None:intergenic |
ACTGAAGCAGAGGATATGGA+TGG | 0.638835 | 3_1:-73011274 | Msa0373880:CDS |
CCTGTCCCCAAATAAAGGGA+CGG | 0.643271 | 3_1:+73011408 | None:intergenic |
GTGTATGTAACCATAATAAG+CGG | 0.646657 | 3_1:+73011370 | None:intergenic |
CTCATCAAGTGACTCAGACG+AGG | 0.649535 | 3_1:+73010474 | None:intergenic |
GAGTTTCAAGTCCAACATAG+GGG | 0.653222 | 3_1:-73010551 | Msa0373880:CDS |
GATTATAGATCGAAATTGTG+AGG | 0.655925 | 3_1:+73020336 | None:intergenic |
GCTTCTCACAATGAGAATGG+AGG | 0.663834 | 3_1:-73019266 | Msa0373880:CDS |
GAAACAAGTTGAGAAAGGCA+TGG | 0.668398 | 3_1:-73013542 | Msa0373880:CDS |
AACGCCGCAAGTCAACTGGA+TGG | 0.668525 | 3_1:-73016112 | Msa0373880:intron |
TGTGGGAAAGAACTTTCTGG+CGG | 0.668683 | 3_1:+73017597 | None:intergenic |
GATCCTTCATTCAAACCACA+AGG | 0.673960 | 3_1:-73016704 | Msa0373880:CDS |
AAACTATGGATGAAGAGACA+AGG | 0.676921 | 3_1:-73010780 | Msa0373880:CDS |
TGAATCGGGTAACAACTATG+TGG | 0.678863 | 3_1:-73011008 | Msa0373880:intron |
AGGAAAATACGGTCTCTCGT+GGG | 0.680794 | 3_1:-73010498 | Msa0373880:CDS |
CCCCGGAAACCAAAACGCGG+TGG | 0.681097 | 3_1:-73020463 | Msa0373880:five_prime_UTR |
ACAGAACCAAGTATATCCAA+CGG | 0.692277 | 3_1:+73020162 | None:intergenic |
TATAGATCGAAATTGTGAGG+TGG | 0.696239 | 3_1:+73020339 | None:intergenic |
CTTCCAAGCAGATGTCCAAG+CGG | 0.707280 | 3_1:-73016884 | Msa0373880:CDS |
ATTACTGAAGAAGAAAACGG+AGG | 0.707582 | 3_1:-73010811 | Msa0373880:CDS |
CCTTCATTCAAACCACAAGG+CGG | 0.708725 | 3_1:-73016701 | Msa0373880:CDS |
GCTGCAATTAGAGGGCAGGG+TGG | 0.716544 | 3_1:-73010718 | Msa0373880:CDS |
GTACCGCCCAAATATCAGCA+GGG | 0.734973 | 3_1:+73020116 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAATTGGAATATATTAT+TGG | - | chr3_1:73012332-73012351 | Msa0373880:CDS | 10.0% |
!!! | AAATTTACTGAATTTTATTT+GGG | + | chr3_1:73016188-73016207 | None:intergenic | 10.0% |
!!! | AAAATTTACTGAATTTTATT+TGG | + | chr3_1:73016189-73016208 | None:intergenic | 10.0% |
!! | AAATAGGATATAAATATAAT+TGG | + | chr3_1:73018366-73018385 | None:intergenic | 10.0% |
!!! | TTTAACTTAGTTAGTATATT+AGG | - | chr3_1:73010556-73010575 | Msa0373880:CDS | 15.0% |
!!! | AGGAAATATATAAGTTTTTA+CGG | - | chr3_1:73011858-73011877 | Msa0373880:intron | 15.0% |
!!! | AGGAAAATAATTTTAATATG+AGG | + | chr3_1:73011900-73011919 | None:intergenic | 15.0% |
!! | GAATAGAATGAAAAAATAAT+AGG | + | chr3_1:73012492-73012511 | None:intergenic | 15.0% |
!! | TTCGTTTATTTGAATTATAT+AGG | - | chr3_1:73013650-73013669 | Msa0373880:intron | 15.0% |
!! | TATATATATATATTTGGTAG+TGG | + | chr3_1:73014256-73014275 | None:intergenic | 15.0% |
!! | AAATTATAGCATGAAAATTT+GGG | + | chr3_1:73014582-73014601 | None:intergenic | 15.0% |
!! | ATATATATATATATAGAGTC+AGG | - | chr3_1:73014759-73014778 | Msa0373880:intron | 15.0% |
!!! | CTTTTAATTTTTGTTTTGTT+GGG | + | chr3_1:73014867-73014886 | None:intergenic | 15.0% |
!!! | TCTTTTAATTTTTGTTTTGT+TGG | + | chr3_1:73014868-73014887 | None:intergenic | 15.0% |
!! | AAAATTAAAAGAACAAATAG+AGG | - | chr3_1:73014876-73014895 | Msa0373880:intron | 15.0% |
!! | ATGATTGTTCTTAAAATTAT+TGG | - | chr3_1:73015159-73015178 | Msa0373880:intron | 15.0% |
!! | TGATTGTTCTTAAAATTATT+GGG | - | chr3_1:73015160-73015179 | Msa0373880:intron | 15.0% |
!!! | TATTTTGTTAGATCTTTATT+AGG | + | chr3_1:73015194-73015213 | None:intergenic | 15.0% |
!! | AAAGATCTAACAAAATAAAT+TGG | - | chr3_1:73015197-73015216 | Msa0373880:intron | 15.0% |
!! | AAGATCTAACAAAATAAATT+GGG | - | chr3_1:73015198-73015217 | Msa0373880:intron | 15.0% |
!! | TATATATATATATATGAGTC+AGG | + | chr3_1:73015507-73015526 | None:intergenic | 15.0% |
!! | ATATATATATATATAGAGAG+AGG | - | chr3_1:73015514-73015533 | Msa0373880:intron | 15.0% |
!!! | TTAGAGAATTTTTTATATGT+TGG | - | chr3_1:73017189-73017208 | Msa0373880:intron | 15.0% |
!! | GTAATTTAGAAGTTAATATT+AGG | - | chr3_1:73017441-73017460 | Msa0373880:intron | 15.0% |
!! | TAACATAATATCAAGATATT+GGG | - | chr3_1:73017486-73017505 | Msa0373880:intron | 15.0% |
!! | TCAAATATAGTTTCTTTATT+AGG | + | chr3_1:73018458-73018477 | None:intergenic | 15.0% |
!! | TAAAGAAACTATATTTGAAA+AGG | - | chr3_1:73018460-73018479 | Msa0373880:intron | 15.0% |
!!! | CTATTTCTTCATTAAATTTA+TGG | - | chr3_1:73018848-73018867 | Msa0373880:intron | 15.0% |
!!! | TTTTTGTAAAATAATTAGTC+CGG | + | chr3_1:73019332-73019351 | None:intergenic | 15.0% |
!! | TTAGTTAGTATATTAGGTTT+AGG | - | chr3_1:73010562-73010581 | Msa0373880:CDS | 20.0% |
!! | TTACAAAAGTTTATGTCATT+GGG | + | chr3_1:73010869-73010888 | None:intergenic | 20.0% |
!!! | AATGACATAAACTTTTGTAA+GGG | - | chr3_1:73010869-73010888 | Msa0373880:intron | 20.0% |
!! | GAAAAAAATGTATTGTTTGA+AGG | + | chr3_1:73011182-73011201 | None:intergenic | 20.0% |
!! | TTCAACTTTATATCGTTATA+AGG | - | chr3_1:73011199-73011218 | Msa0373880:intron | 20.0% |
!! | TGCATTATTTCATTCAATAA+TGG | - | chr3_1:73011255-73011274 | Msa0373880:CDS | 20.0% |
!! | AAATCACAAAAACTTGAAAT+TGG | + | chr3_1:73011385-73011404 | None:intergenic | 20.0% |
!! | CCATATCATGATTAATATTT+AGG | + | chr3_1:73011836-73011855 | None:intergenic | 20.0% |
!! | CCTAAATATTAATCATGATA+TGG | - | chr3_1:73011833-73011852 | Msa0373880:intron | 20.0% |
!!! | TTAAAATTATTTTCCTAAGC+AGG | - | chr3_1:73011904-73011923 | Msa0373880:intron | 20.0% |
!!! | TAAAATTATTTTCCTAAGCA+GGG | - | chr3_1:73011905-73011924 | Msa0373880:intron | 20.0% |
!! | TTATCAGAAATGGAATAAAT+TGG | - | chr3_1:73012319-73012338 | Msa0373880:CDS | 20.0% |
!!! | ATTATTGGATATTTTAACGA+TGG | - | chr3_1:73012347-73012366 | Msa0373880:CDS | 20.0% |
!! | AATCATTCCTATAAAAAGTA+TGG | + | chr3_1:73012795-73012814 | None:intergenic | 20.0% |
!!! | TGCAATATTTTTTTTTTGTG+CGG | - | chr3_1:73013518-73013537 | Msa0373880:CDS | 20.0% |
!! | TCAAAATTCTCAATCAAATA+AGG | + | chr3_1:73013785-73013804 | None:intergenic | 20.0% |
!! | TCTAAACAAAGATAGAAATA+CGG | + | chr3_1:73013816-73013835 | None:intergenic | 20.0% |
!! | ATTTAGCATAAATGTTGTAA+CGG | + | chr3_1:73014048-73014067 | None:intergenic | 20.0% |
!! | ACAAAACAGAAAACAAAATT+AGG | + | chr3_1:73014489-73014508 | None:intergenic | 20.0% |
!!! | AATTTTGTTTTCTGTTTTGT+TGG | - | chr3_1:73014489-73014508 | Msa0373880:intron | 20.0% |
!! | GAAATTATAGCATGAAAATT+TGG | + | chr3_1:73014583-73014602 | None:intergenic | 20.0% |
!!! | AATTTTCATGCTATAATTTC+AGG | - | chr3_1:73014583-73014602 | Msa0373880:intron | 20.0% |
!!! | ATTTTCATGCTATAATTTCA+GGG | - | chr3_1:73014584-73014603 | Msa0373880:intron | 20.0% |
!!! | ATTACCCAAAGTATTAAATA+AGG | + | chr3_1:73014655-73014674 | None:intergenic | 20.0% |
!!! | TTTTGAAACTTACATTAATC+TGG | - | chr3_1:73015000-73015019 | Msa0373880:intron | 20.0% |
!!! | TTTGAAACTTACATTAATCT+GGG | - | chr3_1:73015001-73015020 | Msa0373880:intron | 20.0% |
!! | ATCCAAAATATTAAACCAAT+TGG | + | chr3_1:73015029-73015048 | None:intergenic | 20.0% |
!! | ATGTAATATGAATTGTGATA+AGG | + | chr3_1:73015069-73015088 | None:intergenic | 20.0% |
!! | TATCACAATTCATATTACAT+TGG | - | chr3_1:73015069-73015088 | Msa0373880:intron | 20.0% |
!! | ACTTATATAGAATTATTGAG+TGG | + | chr3_1:73015101-73015120 | None:intergenic | 20.0% |
!! | CAATAATTCTATATAAGTCA+TGG | - | chr3_1:73015103-73015122 | Msa0373880:intron | 20.0% |
!! | TTTCACAGAATCAAAATAAT+TGG | - | chr3_1:73015263-73015282 | Msa0373880:intron | 20.0% |
!!! | TAATTTTTTTTTCCTCATAC+TGG | - | chr3_1:73015847-73015866 | Msa0373880:intron | 20.0% |
!!! | AGTTCCATTTTTATGTTTTT+GGG | + | chr3_1:73015942-73015961 | None:intergenic | 20.0% |
!!! | AAGTTCCATTTTTATGTTTT+TGG | + | chr3_1:73015943-73015962 | None:intergenic | 20.0% |
!!! | TTTTTTTCATGATGTTGAAT+TGG | - | chr3_1:73016205-73016224 | Msa0373880:intron | 20.0% |
!!! | TAATGGTTCAAATTTTTATG+TGG | + | chr3_1:73016354-73016373 | None:intergenic | 20.0% |
!!! | TTTTGATTAGATTTTTGTGA+TGG | - | chr3_1:73016469-73016488 | Msa0373880:intron | 20.0% |
!!! | TAGAATAGGAATTTTTAAAG+AGG | + | chr3_1:73016590-73016609 | None:intergenic | 20.0% |
!! | AGATCAATATTCAATAGAAT+AGG | + | chr3_1:73016604-73016623 | None:intergenic | 20.0% |
!!! | CTTTCGAATAAGAAATATTT+TGG | - | chr3_1:73016931-73016950 | Msa0373880:intron | 20.0% |
!!! | ATAAGAAATATTTTGGTTAG+AGG | - | chr3_1:73016938-73016957 | Msa0373880:intron | 20.0% |
!!! | TATTATTTGCAGAATTCTTT+TGG | - | chr3_1:73016990-73017009 | Msa0373880:intron | 20.0% |
!!! | GAACACAAATTTTATAAGAA+TGG | + | chr3_1:73017255-73017274 | None:intergenic | 20.0% |
!!! | ATCAGATTTTAGATAAAAAG+AGG | - | chr3_1:73017275-73017294 | Msa0373880:intron | 20.0% |
!! | CTAACATAATATCAAGATAT+TGG | - | chr3_1:73017485-73017504 | Msa0373880:intron | 20.0% |
!!! | CCAATTTTTGCTTATATTTT+GGG | + | chr3_1:73017685-73017704 | None:intergenic | 20.0% |
!!! | ACCAATTTTTGCTTATATTT+TGG | + | chr3_1:73017684-73017703 | None:intergenic | 20.0% |
!! | TCAACAAAAGTTAATGTATT+TGG | + | chr3_1:73017665-73017684 | None:intergenic | 20.0% |
!!! | ACCAATTTTTGCTTATATTT+TGG | - | chr3_1:73017684-73017703 | Msa0373880:CDS | 20.0% |
!!! | CCAATTTTTGCTTATATTTT+GGG | - | chr3_1:73017685-73017704 | Msa0373880:CDS | 20.0% |
!!! | ATGTGATTTTCTTCTAAAAT+AGG | - | chr3_1:73017766-73017785 | Msa0373880:intron | 20.0% |
!! | TAATGCAAACAAATTACTAA+TGG | - | chr3_1:73017850-73017869 | Msa0373880:intron | 20.0% |
!!! | TTGTTGTATTTTACAATACA+GGG | + | chr3_1:73018037-73018056 | None:intergenic | 20.0% |
!!! | ATTGTTGTATTTTACAATAC+AGG | + | chr3_1:73018038-73018057 | None:intergenic | 20.0% |
!! | AAATATAGGTTATCTTATGT+TGG | + | chr3_1:73018912-73018931 | None:intergenic | 20.0% |
!! | ACAACAAAACTAAGAAATAT+AGG | + | chr3_1:73018926-73018945 | None:intergenic | 20.0% |
!!! | TGACAAAGTATTTAATTTTC+TGG | - | chr3_1:73019246-73019265 | Msa0373880:CDS | 20.0% |
!!! | GACAAAGTATTTAATTTTCT+GGG | - | chr3_1:73019247-73019266 | Msa0373880:CDS | 20.0% |
!!! | ACAAAGTATTTAATTTTCTG+GGG | - | chr3_1:73019248-73019267 | Msa0373880:CDS | 20.0% |
!!! | GGACTAATTATTTTACAAAA+AGG | - | chr3_1:73019331-73019350 | Msa0373880:intron | 20.0% |
!!! | ACTAAAGTTTTAACAACAAT+GGG | + | chr3_1:73019372-73019391 | None:intergenic | 20.0% |
!!! | AACTAAAGTTTTAACAACAA+TGG | + | chr3_1:73019373-73019392 | None:intergenic | 20.0% |
!! | TTCTTCTTCAGTAATTAAAT+CGG | + | chr3_1:73019753-73019772 | None:intergenic | 20.0% |
!! | TTAATTACTGAAGAAGAAAA+CGG | - | chr3_1:73019755-73019774 | Msa0373880:intron | 20.0% |
!! | AATGATGAATATCATCAAAA+AGG | + | chr3_1:73020203-73020222 | None:intergenic | 20.0% |
!!! | TTTTGATGATATTCATCATT+TGG | - | chr3_1:73020203-73020222 | Msa0373880:CDS | 20.0% |
!! | TATTAGGTTTAGGATATGAT+AGG | - | chr3_1:73010572-73010591 | Msa0373880:CDS | 25.0% |
! | GTAGAAAAACAATGTTGAAT+TGG | - | chr3_1:73010697-73010716 | Msa0373880:CDS | 25.0% |
! | CTTAATGCATTAAGGTATAT+TGG | + | chr3_1:73010765-73010784 | None:intergenic | 25.0% |
! | CAATATACCTTAATGCATTA+AGG | - | chr3_1:73010763-73010782 | Msa0373880:CDS | 25.0% |
! | CTTACAAAAGTTTATGTCAT+TGG | + | chr3_1:73010870-73010889 | None:intergenic | 25.0% |
!! | CAATGACATAAACTTTTGTA+AGG | - | chr3_1:73010868-73010887 | Msa0373880:intron | 25.0% |
!! | ATGACATAAACTTTTGTAAG+GGG | - | chr3_1:73010870-73010889 | Msa0373880:intron | 25.0% |
!! | TGGTTTTTAAATTAGAAACC+AGG | - | chr3_1:73010922-73010941 | Msa0373880:intron | 25.0% |
! | AAAGATTTATAACGTTGGAA+AGG | - | chr3_1:73010947-73010966 | Msa0373880:intron | 25.0% |
!!! | CATATTTTTTGTCAACACTT+TGG | + | chr3_1:73011005-73011024 | None:intergenic | 25.0% |
! | AGCTTAACCAGAAAATAAAA+AGG | + | chr3_1:73011061-73011080 | None:intergenic | 25.0% |
! | TGAACTTAATATGAAAGAAG+AGG | + | chr3_1:73011121-73011140 | None:intergenic | 25.0% |
! | AAGTTCAATTTGACTGTTAT+TGG | - | chr3_1:73011134-73011153 | Msa0373880:intron | 25.0% |
! | AGTTCAATTTGACTGTTATT+GGG | - | chr3_1:73011135-73011154 | Msa0373880:intron | 25.0% |
! | GTTATAAGGTGAAAATATTG+TGG | - | chr3_1:73011213-73011232 | Msa0373880:intron | 25.0% |
! | ATTAGATTAGATGCATAACA+AGG | + | chr3_1:73011558-73011577 | None:intergenic | 25.0% |
! | ATATTAATCATGATATGGCA+AGG | - | chr3_1:73011838-73011857 | Msa0373880:intron | 25.0% |
! | ATCTTCAAAACCTTGAATAA+GGG | + | chr3_1:73011940-73011959 | None:intergenic | 25.0% |
! | ATCAACGATTACAAAAAGTA+AGG | + | chr3_1:73012108-73012127 | None:intergenic | 25.0% |
! | TTTATTCCATTTCTGATAAG+AGG | + | chr3_1:73012318-73012337 | None:intergenic | 25.0% |
! | AAATAATAGGTTCCATTGTT+TGG | + | chr3_1:73012479-73012498 | None:intergenic | 25.0% |
!!! | AATAGAGCCATACTTTTTAT+AGG | - | chr3_1:73012785-73012804 | Msa0373880:intron | 25.0% |
!!! | TTTCAAGTTCTGTATACAAT+TGG | - | chr3_1:73013283-73013302 | Msa0373880:intron | 25.0% |
! | AAATATGCATTGTAGAGTAT+TGG | - | chr3_1:73013339-73013358 | Msa0373880:intron | 25.0% |
! | ACAAAGAAATGAAGAATTGA+CGG | + | chr3_1:73013398-73013417 | None:intergenic | 25.0% |
!!! | GCAATATTTTTTTTTTGTGC+GGG | - | chr3_1:73013519-73013538 | Msa0373880:CDS | 25.0% |
! | TCGTCAATAACATTCATATA+AGG | + | chr3_1:73013723-73013742 | None:intergenic | 25.0% |
!!! | AGGAGTATTATAGATACAAA+AGG | - | chr3_1:73013974-73013993 | Msa0373880:intron | 25.0% |
!!! | TCAGTTATATTTTTACACTG+AGG | - | chr3_1:73014068-73014087 | Msa0373880:intron | 25.0% |
! | ATATATCATATCACCACATA+TGG | + | chr3_1:73014154-73014173 | None:intergenic | 25.0% |
! | ACAATGCATAAAAATATGCA+AGG | - | chr3_1:73014211-73014230 | Msa0373880:intron | 25.0% |
! | TGAGTATATAACTTATGTAC+TGG | - | chr3_1:73014398-73014417 | Msa0373880:intron | 25.0% |
!! | GGATCCTTATTTAATACTTT+GGG | - | chr3_1:73014648-73014667 | Msa0373880:intron | 25.0% |
! | TTGAAACTTACATTAATCTG+GGG | - | chr3_1:73015002-73015021 | Msa0373880:intron | 25.0% |
!!! | GACCAATTGGTTTAATATTT+TGG | - | chr3_1:73015024-73015043 | Msa0373880:intron | 25.0% |
! | CTAACAAAATAAATTGGGAA+TGG | - | chr3_1:73015203-73015222 | Msa0373880:intron | 25.0% |
! | TTCAATATTGGATTATACCA+AGG | - | chr3_1:73015229-73015248 | Msa0373880:intron | 25.0% |
!!! | AAATCATTTTAACTTACACC+TGG | - | chr3_1:73015470-73015489 | Msa0373880:intron | 25.0% |
! | CACAATAAAGATTAATCCAA+GGG | + | chr3_1:73015594-73015613 | None:intergenic | 25.0% |
! | ACACAATAAAGATTAATCCA+AGG | + | chr3_1:73015595-73015614 | None:intergenic | 25.0% |
! | TGAACCCAAAAACATAAAAA+TGG | - | chr3_1:73015935-73015954 | Msa0373880:CDS | 25.0% |
! | TAAAAATGGAACTTTGTAAG+AGG | - | chr3_1:73015949-73015968 | Msa0373880:CDS | 25.0% |
! | AACCATTAAGATTGATCTAA+GGG | - | chr3_1:73016366-73016385 | Msa0373880:intron | 25.0% |
! | CAAAATAAATTTACCTCCTT+CGG | - | chr3_1:73016708-73016727 | Msa0373880:CDS | 25.0% |
! | GATATGAGAGAATTTGAATA+TGG | - | chr3_1:73016735-73016754 | Msa0373880:intron | 25.0% |
!!! | AAATATATTGACTTCTCACT+AGG | + | chr3_1:73016771-73016790 | None:intergenic | 25.0% |
!!! | CTCATACATACTTTTGTTTT+TGG | - | chr3_1:73016792-73016811 | Msa0373880:intron | 25.0% |
! | TTGCACTATTTAAACATTCA+GGG | - | chr3_1:73016888-73016907 | Msa0373880:CDS | 25.0% |
! | AAATTGTGGGTTCTTATTAA+TGG | - | chr3_1:73016966-73016985 | Msa0373880:intron | 25.0% |
! | TTTCCAATTTACTTAGGATT+AGG | + | chr3_1:73017392-73017411 | None:intergenic | 25.0% |
!!! | TTTTTGCTTATATTTTGGGA+CGG | + | chr3_1:73017689-73017708 | None:intergenic | 25.0% |
! | CCCAAAATATAAGCAAAAAT+TGG | - | chr3_1:73017603-73017622 | Msa0373880:CDS | 25.0% |
! | TCAACGAAAGTTAATGTATT+TGG | - | chr3_1:73017626-73017645 | Msa0373880:CDS | 25.0% |
! | CCCAAAATATAAGCAAAAAT+TGG | + | chr3_1:73017603-73017622 | None:intergenic | 25.0% |
!!! | TTTTTGCTTATATTTTGGGA+CGG | - | chr3_1:73017689-73017708 | Msa0373880:CDS | 25.0% |
!!! | CTACTTTTGATTTGAAATGA+AGG | - | chr3_1:73017922-73017941 | Msa0373880:intron | 25.0% |
! | TACTACTCTTTGTTCAAAAT+CGG | - | chr3_1:73018203-73018222 | Msa0373880:intron | 25.0% |
!!! | TTTATATCCTATTTTTTCCC+AGG | - | chr3_1:73018372-73018391 | Msa0373880:intron | 25.0% |
! | AATTATCCAAACCATTAAAG+AGG | - | chr3_1:73018640-73018659 | Msa0373880:CDS | 25.0% |
! | ATTATCCAAACCATTAAAGA+GGG | - | chr3_1:73018641-73018660 | Msa0373880:CDS | 25.0% |
! | AAATCTAAATCCCTCTTTAA+TGG | + | chr3_1:73018654-73018673 | None:intergenic | 25.0% |
! | AGAGGGATTTAGATTTAATA+TGG | - | chr3_1:73018658-73018677 | Msa0373880:intron | 25.0% |
! | TCATTCAACTTGATTCATAT+AGG | - | chr3_1:73018685-73018704 | Msa0373880:intron | 25.0% |
! | GCAAAATAGATGAAATGAAA+CGG | + | chr3_1:73018722-73018741 | None:intergenic | 25.0% |
! | TGCTTTCTTCAAAAATTGTT+TGG | - | chr3_1:73018757-73018776 | Msa0373880:intron | 25.0% |
! | CAAAAATCAAAATAGACAGA+AGG | + | chr3_1:73018888-73018907 | None:intergenic | 25.0% |
! | CAAAATTTATCCGCTTATTA+TGG | - | chr3_1:73019189-73019208 | Msa0373880:intron | 25.0% |
!! | GTTAAAACTTTAGTTCAAGT+TGG | - | chr3_1:73019378-73019397 | Msa0373880:intron | 25.0% |
!! | AATTACTTCCAATTTTGTGA+AGG | + | chr3_1:73019599-73019618 | None:intergenic | 25.0% |
!! | TTGGAACTACTATTTTCTTT+TGG | - | chr3_1:73019655-73019674 | Msa0373880:intron | 25.0% |
! | AAATTATCTTGTACAGTGAT+GGG | - | chr3_1:73020273-73020292 | Msa0373880:exon | 25.0% |
!!! | AGTATTGATTCTAACTTCTA+AGG | + | chr3_1:73020419-73020438 | None:intergenic | 25.0% |
!! | AATAAAAACAATGTTTTGCC+TGG | - | chr3_1:73020567-73020586 | Msa0373880:five_prime_UTR | 25.0% |
AACTTGTAAACGTTACTGAA+CGG | + | chr3_1:73010004-73010023 | None:intergenic | 30.0% | |
! | TTGGAGTTTAAAGTCTGAAT+GGG | + | chr3_1:73010149-73010168 | None:intergenic | 30.0% |
! | ATTGGAGTTTAAAGTCTGAA+TGG | + | chr3_1:73010150-73010169 | None:intergenic | 30.0% |
GATTATAGATCGAAATTGTG+AGG | + | chr3_1:73010236-73010255 | None:intergenic | 30.0% | |
AATGCTATCTAGAAGGTTAT+TGG | - | chr3_1:73010675-73010694 | Msa0373880:CDS | 30.0% | |
! | ACCTTAATGCATTAAGGTTT+TGG | - | chr3_1:73010769-73010788 | Msa0373880:CDS | 30.0% |
TCCAAAACCTTAATGCATTA+AGG | + | chr3_1:73010773-73010792 | None:intergenic | 30.0% | |
AACGTTATAAATCTTTCTCC+TGG | + | chr3_1:73010943-73010962 | None:intergenic | 30.0% | |
AGGAGAAAGATTTATAACGT+TGG | - | chr3_1:73010942-73010961 | Msa0373880:intron | 30.0% | |
!!! | CTTCATGCCTTTTTATTTTC+TGG | - | chr3_1:73011051-73011070 | Msa0373880:CDS | 30.0% |
!!! | ATGGAGGTATTTCTTTCTTT+TGG | - | chr3_1:73011319-73011338 | Msa0373880:CDS | 30.0% |
ACTAAAAACAAGGATTCTGA+AGG | + | chr3_1:73011521-73011540 | None:intergenic | 30.0% | |
!!! | TCAGAATCCTTGTTTTTAGT+CGG | - | chr3_1:73011521-73011540 | Msa0373880:intron | 30.0% |
TGCATTCATACTTACTCATA+AGG | + | chr3_1:73011670-73011689 | None:intergenic | 30.0% | |
! | GTGTTATTCATTACTACTTC+TGG | + | chr3_1:73011733-73011752 | None:intergenic | 30.0% |
GTAGTAATGAATAACACATG+AGG | - | chr3_1:73011736-73011755 | Msa0373880:intron | 30.0% | |
TCTTCAAAACCTTGAATAAG+GGG | + | chr3_1:73011939-73011958 | None:intergenic | 30.0% | |
CATCTTCAAAACCTTGAATA+AGG | + | chr3_1:73011941-73011960 | None:intergenic | 30.0% | |
! | TTGGTCTTCTATCTAATTGT+GGG | - | chr3_1:73012011-73012030 | Msa0373880:intron | 30.0% |
AATAATTCCGAAAAGACCAA+TGG | + | chr3_1:73012039-73012058 | None:intergenic | 30.0% | |
! | GACTCTAAAAAGCAATAACT+TGG | + | chr3_1:73012159-73012178 | None:intergenic | 30.0% |
CATACATTGTTACAATACGA+GGG | - | chr3_1:73012269-73012288 | Msa0373880:intron | 30.0% | |
! | TTGTTTGGAACAGAATTCAA+TGG | + | chr3_1:73012464-73012483 | None:intergenic | 30.0% |
TTGAATTCTGTTCCAAACAA+TGG | - | chr3_1:73012464-73012483 | Msa0373880:intron | 30.0% | |
TTATGATTGGATTGATGCAA+GGG | + | chr3_1:73012519-73012538 | None:intergenic | 30.0% | |
ACTCTTCATTCAATTGTTAG+TGG | - | chr3_1:73012624-73012643 | Msa0373880:intron | 30.0% | |
! | TGATTGATACTTTTGTAAGC+AGG | - | chr3_1:73012821-73012840 | Msa0373880:intron | 30.0% |
!! | AAAAGTATTTGAGCAAGTCA+TGG | + | chr3_1:73012869-73012888 | None:intergenic | 30.0% |
!!! | ATGACTTGCTCAAATACTTT+TGG | - | chr3_1:73012868-73012887 | Msa0373880:intron | 30.0% |
!!! | AATACTTTTGGACTTGTTAC+TGG | - | chr3_1:73012880-73012899 | Msa0373880:intron | 30.0% |
ATCACTTACAACAATAGCAT+TGG | + | chr3_1:73013046-73013065 | None:intergenic | 30.0% | |
! | TTTCTAGTGCACATAAAGTT+TGG | - | chr3_1:73013145-73013164 | Msa0373880:intron | 30.0% |
TAAGCCATATAAACAAGAAC+AGG | + | chr3_1:73013211-73013230 | None:intergenic | 30.0% | |
TGGACAAAGAAAATTAGAGA+GGG | + | chr3_1:73013253-73013272 | None:intergenic | 30.0% | |
! | TCTAATTTTCTTTGTCCAGT+TGG | - | chr3_1:73013255-73013274 | Msa0373880:intron | 30.0% |
AAAGAAATGAAGAATTGACG+GGG | + | chr3_1:73013396-73013415 | None:intergenic | 30.0% | |
CAAAGAAATGAAGAATTGAC+GGG | + | chr3_1:73013397-73013416 | None:intergenic | 30.0% | |
! | TCTTCATTTCTTTGTCCTTT+TGG | - | chr3_1:73013403-73013422 | Msa0373880:intron | 30.0% |
! | CTTCATTTCTTTGTCCTTTT+GGG | - | chr3_1:73013404-73013423 | Msa0373880:intron | 30.0% |
! | TTCATTTCTTTGTCCTTTTG+GGG | - | chr3_1:73013405-73013424 | Msa0373880:intron | 30.0% |
ACATTCATATAAGGTCTCAA+AGG | + | chr3_1:73013714-73013733 | None:intergenic | 30.0% | |
GTGATCAATTTAGTATCTAG+TGG | - | chr3_1:73014004-73014023 | Msa0373880:intron | 30.0% | |
!!! | CGAGTTATTTATTTTTGCTC+TGG | - | chr3_1:73014107-73014126 | Msa0373880:intron | 30.0% |
!! | TATATATATTTGGTAGTGGC+CGG | + | chr3_1:73014252-73014271 | None:intergenic | 30.0% |
CTGTCAAATCTTTACAACAA+AGG | - | chr3_1:73014318-73014337 | Msa0373880:intron | 30.0% | |
!!! | TAAATTTTGACTGTCGTTGA+AGG | + | chr3_1:73014356-73014375 | None:intergenic | 30.0% |
!!! | GTTTTCTGTTTTGTTGGTTT+AGG | - | chr3_1:73014495-73014514 | Msa0373880:intron | 30.0% |
ATAGCATGAAAATTTGGGTA+AGG | + | chr3_1:73014577-73014596 | None:intergenic | 30.0% | |
! | GGGATCCTTATTTAATACTT+TGG | - | chr3_1:73014647-73014666 | Msa0373880:intron | 30.0% |
TCTGTGAACTAATCAACAAA+CGG | + | chr3_1:73014699-73014718 | None:intergenic | 30.0% | |
ACAGAGAAAACAATGAAGAT+TGG | + | chr3_1:73014925-73014944 | None:intergenic | 30.0% | |
!! | TGGGAATGGATTTTCAATAT+TGG | - | chr3_1:73015217-73015236 | Msa0373880:intron | 30.0% |
GTGAAACAATATTTGATCCT+TGG | + | chr3_1:73015249-73015268 | None:intergenic | 30.0% | |
!! | AACTTGTTGAAGTCTAAGAT+CGG | + | chr3_1:73015346-73015365 | None:intergenic | 30.0% |
! | TCCTCTTTTGATATTTTGTG+AGG | - | chr3_1:73015396-73015415 | Msa0373880:intron | 30.0% |
ACCTCACAAAATATCAAAAG+AGG | + | chr3_1:73015400-73015419 | None:intergenic | 30.0% | |
ACAAGATTAATTCGTATGAG+CGG | - | chr3_1:73015433-73015452 | Msa0373880:intron | 30.0% | |
TGAAAGAAAAGAAGAAACGA+GGG | + | chr3_1:73015657-73015676 | None:intergenic | 30.0% | |
! | ATGCGAATTTTCCAGAAATT+GGG | - | chr3_1:73015678-73015697 | Msa0373880:intron | 30.0% |
ATACATCAAATTTGCATCAG+GGG | + | chr3_1:73015758-73015777 | None:intergenic | 30.0% | |
GATACATCAAATTTGCATCA+GGG | + | chr3_1:73015759-73015778 | None:intergenic | 30.0% | |
TGATACATCAAATTTGCATC+AGG | + | chr3_1:73015760-73015779 | None:intergenic | 30.0% | |
!! | TTCACAACTTTAGAATCACA+CGG | - | chr3_1:73015810-73015829 | Msa0373880:intron | 30.0% |
AATCACACGGAAAAGAAATT+GGG | - | chr3_1:73015823-73015842 | Msa0373880:intron | 30.0% | |
ATTAAAAGATGACCAGTATG+AGG | + | chr3_1:73015862-73015881 | None:intergenic | 30.0% | |
AATCATCAAATTGAAACCCA+AGG | - | chr3_1:73015901-73015920 | Msa0373880:intron | 30.0% | |
ATCATCAAATTGAAACCCAA+GGG | - | chr3_1:73015902-73015921 | Msa0373880:intron | 30.0% | |
!!! | TTTATGTTTTTGGGTTCATG+AGG | + | chr3_1:73015933-73015952 | None:intergenic | 30.0% |
! | ACAACAAAGTTGGAGATTTT+AGG | - | chr3_1:73016078-73016097 | Msa0373880:intron | 30.0% |
! | CAACAAAGTTGGAGATTTTA+GGG | - | chr3_1:73016079-73016098 | Msa0373880:intron | 30.0% |
!!! | TCTCTTATTTTTCTGTACGT+GGG | + | chr3_1:73016331-73016350 | None:intergenic | 30.0% |
GAACCATTAAGATTGATCTA+AGG | - | chr3_1:73016365-73016384 | Msa0373880:intron | 30.0% | |
AACCCTTAGATCAATCTTAA+TGG | + | chr3_1:73016371-73016390 | None:intergenic | 30.0% | |
TAAGATTGATCTAAGGGTTA+TGG | - | chr3_1:73016372-73016391 | Msa0373880:intron | 30.0% | |
AATGCATGAGAAGTTAGATA+TGG | + | chr3_1:73016550-73016569 | None:intergenic | 30.0% | |
TGTCTTGTCTTTCTCAAATA+AGG | - | chr3_1:73016846-73016865 | Msa0373880:CDS | 30.0% | |
CTTTCTCAAATAAGGTTTCT+TGG | - | chr3_1:73016854-73016873 | Msa0373880:CDS | 30.0% | |
GTTGCACTATTTAAACATTC+AGG | - | chr3_1:73016887-73016906 | Msa0373880:CDS | 30.0% | |
ATTCGAAAGACAGAAAAATG+AGG | + | chr3_1:73016920-73016939 | None:intergenic | 30.0% | |
!! | TCTTTTGGAAATGCGTTTTA+AGG | - | chr3_1:73017005-73017024 | Msa0373880:intron | 30.0% |
! | TTAAGGAAACAAGTTGAGAA+AGG | - | chr3_1:73017022-73017041 | Msa0373880:intron | 30.0% |
!! | TCGAACGGATTTTATAAGAA+TGG | + | chr3_1:73017134-73017153 | None:intergenic | 30.0% |
AAACATCAACCCCTATTTAT+AGG | - | chr3_1:73017352-73017371 | Msa0373880:intron | 30.0% | |
AACATCAACCCCTATTTATA+GGG | - | chr3_1:73017353-73017372 | Msa0373880:intron | 30.0% | |
AATTTACTTAGGATTAGGAG+GGG | + | chr3_1:73017387-73017406 | None:intergenic | 30.0% | |
CAATTTACTTAGGATTAGGA+GGG | + | chr3_1:73017388-73017407 | None:intergenic | 30.0% | |
CCTAACTTTCCAATTTACTT+AGG | + | chr3_1:73017398-73017417 | None:intergenic | 30.0% | |
CCTAAGTAAATTGGAAAGTT+AGG | - | chr3_1:73017395-73017414 | Msa0373880:intron | 30.0% | |
!!! | TTTTGCTTATATTTTGGGAC+GGG | - | chr3_1:73017690-73017709 | Msa0373880:CDS | 30.0% |
TACACTTCTTTGTGATTAGA+TGG | - | chr3_1:73017715-73017734 | Msa0373880:CDS | 30.0% | |
ACACTTCTTTGTGATTAGAT+GGG | - | chr3_1:73017716-73017735 | Msa0373880:CDS | 30.0% | |
! | AAATAAGCTTACTTCCCTTT+TGG | - | chr3_1:73017813-73017832 | Msa0373880:intron | 30.0% |
! | TTACCTTCATTTTCTTGTAC+AGG | - | chr3_1:73018139-73018158 | Msa0373880:intron | 30.0% |
GAACAACAAACAAATATGAG+TGG | + | chr3_1:73018322-73018341 | None:intergenic | 30.0% | |
TGAGGAAGTTGTATGATATA+GGG | + | chr3_1:73018418-73018437 | None:intergenic | 30.0% | |
TTGAGGAAGTTGTATGATAT+AGG | + | chr3_1:73018419-73018438 | None:intergenic | 30.0% | |
! | TTTCCTTGTGCTTATCTTTT+TGG | - | chr3_1:73018595-73018614 | Msa0373880:CDS | 30.0% |
TAAATCCCTCTTTAATGGTT+TGG | + | chr3_1:73018649-73018668 | None:intergenic | 30.0% | |
!! | ATTTTTGAAGAAAGCACACT+AGG | + | chr3_1:73018753-73018772 | None:intergenic | 30.0% |
GAAATAGTTGAGTGCATTAT+GGG | + | chr3_1:73018835-73018854 | None:intergenic | 30.0% | |
AGAAATAGTTGAGTGCATTA+TGG | + | chr3_1:73018836-73018855 | None:intergenic | 30.0% | |
GGATTAAAAAAGTGAAGGAA+AGG | + | chr3_1:73019093-73019112 | None:intergenic | 30.0% | |
ATCATAGATAAATTGTGCAC+TGG | + | chr3_1:73019114-73019133 | None:intergenic | 30.0% | |
GTGTATGTAACCATAATAAG+CGG | + | chr3_1:73019202-73019221 | None:intergenic | 30.0% | |
! | TATTTTCAAAACTGAAGCAG+AGG | - | chr3_1:73019285-73019304 | Msa0373880:intron | 30.0% |
TGTAAAATAATTAGTCCGGA+TGG | + | chr3_1:73019328-73019347 | None:intergenic | 30.0% | |
TTGCAATACTTATGCTTGAT+TGG | - | chr3_1:73019439-73019458 | Msa0373880:intron | 30.0% | |
!!! | GTTCTGTTTTATTTGTAGAG+CGG | - | chr3_1:73019461-73019480 | Msa0373880:intron | 30.0% |
TAGACATTCCTTCACAAAAT+TGG | - | chr3_1:73019588-73019607 | Msa0373880:intron | 30.0% | |
TTGGAAGTAATTTGACCTAA+TGG | - | chr3_1:73019607-73019626 | Msa0373880:intron | 30.0% | |
! | AGTAATTCTAGAAATTCAGC+TGG | - | chr3_1:73019941-73019960 | Msa0373880:intron | 30.0% |
TAAGTAACTTGGTTCAAAGA+TGG | + | chr3_1:73020142-73020161 | None:intergenic | 30.0% | |
! | ATACAGGTGTAAAGTGTTAT+TGG | - | chr3_1:73020233-73020252 | Msa0373880:CDS | 30.0% |
CATCACTGTACAAGATAATT+TGG | + | chr3_1:73020274-73020293 | None:intergenic | 30.0% | |
CAAATTATCTTGTACAGTGA+TGG | - | chr3_1:73020272-73020291 | Msa0373880:exon | 30.0% | |
! | TAGCCTATCTTTTCATCTTT+AGG | + | chr3_1:73020344-73020363 | None:intergenic | 30.0% |
GAAAGAAAAACTACGCTATA+TGG | + | chr3_1:73020481-73020500 | None:intergenic | 30.0% | |
TATAGATCGAAATTGTGAGG+TGG | + | chr3_1:73010233-73010252 | None:intergenic | 35.0% | |
! | TTTTCACCGTTGGATATACT+TGG | - | chr3_1:73010401-73010420 | Msa0373880:exon | 35.0% |
ACAGAACCAAGTATATCCAA+CGG | + | chr3_1:73010410-73010429 | None:intergenic | 35.0% | |
TATGATAGGATTGCGTATCA+TGG | - | chr3_1:73010586-73010605 | Msa0373880:CDS | 35.0% | |
!! | AGATAGCATTTCTAGTGTCA+TGG | + | chr3_1:73010665-73010684 | None:intergenic | 35.0% |
CACTAGAAATGCTATCTAGA+AGG | - | chr3_1:73010668-73010687 | Msa0373880:CDS | 35.0% | |
!!! | TAAGGTTTTGGATGAAGATG+CGG | - | chr3_1:73010781-73010800 | Msa0373880:CDS | 35.0% |
TTTATGTCATTGGGTCATGA+GGG | + | chr3_1:73010860-73010879 | None:intergenic | 35.0% | |
ATGGAGAAGTTGTGAATAGT+TGG | - | chr3_1:73010902-73010921 | Msa0373880:intron | 35.0% | |
AATATGCTGCCTCCTTATAA+TGG | - | chr3_1:73011019-73011038 | Msa0373880:CDS | 35.0% | |
AAGCTTGTGTCAAATAAGTC+AGG | - | chr3_1:73011076-73011095 | Msa0373880:CDS | 35.0% | |
ATAGCTTCTCACAATGAGAA+TGG | - | chr3_1:73011300-73011319 | Msa0373880:CDS | 35.0% | |
!!! | GTATTTCTTTCTTTTGGAGC+TGG | - | chr3_1:73011325-73011344 | Msa0373880:CDS | 35.0% |
! | GGAGTACATTTTTGCTTACT+TGG | - | chr3_1:73011355-73011374 | Msa0373880:CDS | 35.0% |
!! | GCTCAAATAACTCTGAAGTT+TGG | + | chr3_1:73011451-73011470 | None:intergenic | 35.0% |
! | TGAAGGTATGTTTGGGTTTA+GGG | + | chr3_1:73011504-73011523 | None:intergenic | 35.0% |
! | AGGATTCTGAAGGTATGTTT+GGG | + | chr3_1:73011511-73011530 | None:intergenic | 35.0% |
! | AAGGATTCTGAAGGTATGTT+TGG | + | chr3_1:73011512-73011531 | None:intergenic | 35.0% |
! | ATTCATTACTACTTCTGGAG+TGG | + | chr3_1:73011728-73011747 | None:intergenic | 35.0% |
!!! | ATTCAAGGTTTTGAAGATGC+TGG | - | chr3_1:73011942-73011961 | Msa0373880:intron | 35.0% |
!!! | TTCAAGGTTTTGAAGATGCT+GGG | - | chr3_1:73011943-73011962 | Msa0373880:intron | 35.0% |
! | CTTGGTCTTCTATCTAATTG+TGG | - | chr3_1:73012010-73012029 | Msa0373880:intron | 35.0% |
TATCTAATTGTGGGATCCAT+TGG | - | chr3_1:73012020-73012039 | Msa0373880:intron | 35.0% | |
TTCTTCTCATTATGATGCAC+AGG | - | chr3_1:73012057-73012076 | Msa0373880:intron | 35.0% | |
TTACAAAAAGTAAGGCTAGG+AGG | + | chr3_1:73012100-73012119 | None:intergenic | 35.0% | |
CGATTACAAAAAGTAAGGCT+AGG | + | chr3_1:73012103-73012122 | None:intergenic | 35.0% | |
! | TTTAGAGTCTCTCGTCAAAA+TGG | - | chr3_1:73012170-73012189 | Msa0373880:CDS | 35.0% |
GCATACATTGTTACAATACG+AGG | - | chr3_1:73012268-73012287 | Msa0373880:intron | 35.0% | |
TTGGAAAGTAAGGCAAATTG+TGG | - | chr3_1:73012400-73012419 | Msa0373880:CDS | 35.0% | |
! | AGGCAAATTGTGGTATTGAA+TGG | - | chr3_1:73012410-73012429 | Msa0373880:CDS | 35.0% |
GTTATGATTGGATTGATGCA+AGG | + | chr3_1:73012520-73012539 | None:intergenic | 35.0% | |
CACATGCATACAGTTATGAT+TGG | + | chr3_1:73012532-73012551 | None:intergenic | 35.0% | |
CTCAATTAAGTGTGAGAACT+AGG | - | chr3_1:73012553-73012572 | Msa0373880:intron | 35.0% | |
TTGACAAGTTAGCATGAAGT+AGG | - | chr3_1:73012722-73012741 | Msa0373880:intron | 35.0% | |
! | ATACTTTTGTAAGCAGGAGT+GGG | - | chr3_1:73012827-73012846 | Msa0373880:intron | 35.0% |
!! | GTGAAATTCCTAAAAGCATC+TGG | - | chr3_1:73012929-73012948 | Msa0373880:intron | 35.0% |
! | TTTTGTGGGAAAGAACTTTC+TGG | + | chr3_1:73012978-73012997 | None:intergenic | 35.0% |
! | CAATAGCATTGGAAAGTTCT+TGG | + | chr3_1:73013035-73013054 | None:intergenic | 35.0% |
! | ACCACCTGTTCTTGTTTATA+TGG | - | chr3_1:73013204-73013223 | Msa0373880:intron | 35.0% |
ACAAAGAAAATTAGAGAGGG+TGG | + | chr3_1:73013250-73013269 | None:intergenic | 35.0% | |
CTGGACAAAGAAAATTAGAG+AGG | + | chr3_1:73013254-73013273 | None:intergenic | 35.0% | |
AAAGCAATGATTTCCCCAAA+AGG | + | chr3_1:73013421-73013440 | None:intergenic | 35.0% | |
AAAAACTACGTGTAGGTGTT+GGG | + | chr3_1:73013619-73013638 | None:intergenic | 35.0% | |
TGACGATATGCTTACTCAAA+TGG | - | chr3_1:73013737-73013756 | Msa0373880:intron | 35.0% | |
GCAATTAGGGGAAAATGATA+TGG | - | chr3_1:73013891-73013910 | Msa0373880:intron | 35.0% | |
AGAAGTCAATGGCTAAACTA+AGG | - | chr3_1:73013929-73013948 | Msa0373880:intron | 35.0% | |
GATAATGCCTAAACCATATG+TGG | - | chr3_1:73014138-73014157 | Msa0373880:intron | 35.0% | |
CATATCACCACATATGGTTT+AGG | + | chr3_1:73014148-73014167 | None:intergenic | 35.0% | |
ATAAAAATATGCAAGGTCCG+AGG | - | chr3_1:73014218-73014237 | Msa0373880:intron | 35.0% | |
!! | ATATATATTTGGTAGTGGCC+GGG | + | chr3_1:73014251-73014270 | None:intergenic | 35.0% |
TATCGTATCTTCCAACTCAA+GGG | + | chr3_1:73014427-73014446 | None:intergenic | 35.0% | |
TTATCGTATCTTCCAACTCA+AGG | + | chr3_1:73014428-73014447 | None:intergenic | 35.0% | |
ATGAAAATTTGGGTAAGGTG+GGG | + | chr3_1:73014572-73014591 | None:intergenic | 35.0% | |
CATGAAAATTTGGGTAAGGT+GGG | + | chr3_1:73014573-73014592 | None:intergenic | 35.0% | |
CTGTGAACTAATCAACAAAC+GGG | + | chr3_1:73014698-73014717 | None:intergenic | 35.0% | |
GAATATTTCTTTGCTGCATC+TGG | - | chr3_1:73014717-73014736 | Msa0373880:intron | 35.0% | |
! | GAAGTCTAAGATCGGAAAAA+CGG | + | chr3_1:73015338-73015357 | None:intergenic | 35.0% |
GCTCATACGAATTAATCTTG+TGG | + | chr3_1:73015434-73015453 | None:intergenic | 35.0% | |
! | TTTTTATTGTGAGAGGTGAG+AGG | - | chr3_1:73015556-73015575 | Msa0373880:intron | 35.0% |
! | TTTTATTGTGAGAGGTGAGA+GGG | - | chr3_1:73015557-73015576 | Msa0373880:intron | 35.0% |
TAAAGATTAATCCAAGGGCT+AGG | + | chr3_1:73015589-73015608 | None:intergenic | 35.0% | |
!! | GGTGAGTTGATTATACAATG+TGG | + | chr3_1:73015634-73015653 | None:intergenic | 35.0% |
AAAGAAAAGAAGAAACGAGG+GGG | + | chr3_1:73015655-73015674 | None:intergenic | 35.0% | |
GAAAGAAAAGAAGAAACGAG+GGG | + | chr3_1:73015656-73015675 | None:intergenic | 35.0% | |
GTGAAAGAAAAGAAGAAACG+AGG | + | chr3_1:73015658-73015677 | None:intergenic | 35.0% | |
! | CATGCGAATTTTCCAGAAAT+TGG | - | chr3_1:73015677-73015696 | Msa0373880:intron | 35.0% |
GAATCACACGGAAAAGAAAT+TGG | - | chr3_1:73015822-73015841 | Msa0373880:intron | 35.0% | |
! | CATGGAAGAAGGTACAAAAA+GGG | - | chr3_1:73015975-73015994 | Msa0373880:intron | 35.0% |
TGAGAAGATAGAAGAATCGA+TGG | - | chr3_1:73016046-73016065 | Msa0373880:intron | 35.0% | |
GATGACATGAACAACAAAGT+TGG | - | chr3_1:73016068-73016087 | Msa0373880:intron | 35.0% | |
GGATCTCCAAACTATACATT+TGG | - | chr3_1:73016226-73016245 | Msa0373880:intron | 35.0% | |
!!! | GTCTCTTATTTTTCTGTACG+TGG | + | chr3_1:73016332-73016351 | None:intergenic | 35.0% |
CACAGAAGAGATAATGTTCA+CGG | + | chr3_1:73016496-73016515 | None:intergenic | 35.0% | |
ACATGATTGCAACATTGCAT+AGG | - | chr3_1:73016683-73016702 | Msa0373880:CDS | 35.0% | |
TTCTCTCATATCAAAACCGA+AGG | + | chr3_1:73016727-73016746 | None:intergenic | 35.0% | |
!! | GTTAGAGGCATTGAAATTGT+GGG | - | chr3_1:73016953-73016972 | Msa0373880:intron | 35.0% |
! | TGTTGCAATTCTTTTAGCAG+AGG | - | chr3_1:73017072-73017091 | Msa0373880:intron | 35.0% |
AAAAGCGATAGATCAATGCT+AGG | + | chr3_1:73017109-73017128 | None:intergenic | 35.0% | |
TATAAAATCCGTTCGAACAC+AGG | - | chr3_1:73017138-73017157 | Msa0373880:intron | 35.0% | |
CCTTGTATCCCTATAAATAG+GGG | + | chr3_1:73017364-73017383 | None:intergenic | 35.0% | |
GCCTTGTATCCCTATAAATA+GGG | + | chr3_1:73017365-73017384 | None:intergenic | 35.0% | |
CCAATTTACTTAGGATTAGG+AGG | + | chr3_1:73017389-73017408 | None:intergenic | 35.0% | |
CCTCCTAATCCTAAGTAAAT+TGG | - | chr3_1:73017386-73017405 | Msa0373880:intron | 35.0% | |
GTAATGTGAATCATGTACTG+TGG | - | chr3_1:73018067-73018086 | Msa0373880:intron | 35.0% | |
ATGCCTGTACAAGAAAATGA+AGG | + | chr3_1:73018145-73018164 | None:intergenic | 35.0% | |
CATAAGTAAGTTAACTGAGC+TGG | + | chr3_1:73018264-73018283 | None:intergenic | 35.0% | |
CAACAAACAAATATGAGTGG+TGG | + | chr3_1:73018319-73018338 | None:intergenic | 35.0% | |
TGGTATTCATTTGACAGCAT+AGG | + | chr3_1:73018346-73018365 | None:intergenic | 35.0% | |
!!! | TATCCTATTTTTTCCCAGGA+TGG | - | chr3_1:73018376-73018395 | Msa0373880:intron | 35.0% |
AGGAAGTTGTATGATATAGG+GGG | + | chr3_1:73018416-73018435 | None:intergenic | 35.0% | |
GAGGAAGTTGTATGATATAG+GGG | + | chr3_1:73018417-73018436 | None:intergenic | 35.0% | |
TAGTTTCTTTATTAGGACCG+AGG | + | chr3_1:73018451-73018470 | None:intergenic | 35.0% | |
TGACGAATCAAAAGAGTCAT+AGG | + | chr3_1:73018490-73018509 | None:intergenic | 35.0% | |
TAATCCAACAAAACTGTCGA+CGG | - | chr3_1:73018539-73018558 | Msa0373880:CDS | 35.0% | |
ATGCCAAAAAGATAAGCACA+AGG | + | chr3_1:73018601-73018620 | None:intergenic | 35.0% | |
TAGTAGTTGCTAACTAAGTC+AGG | + | chr3_1:73019035-73019054 | None:intergenic | 35.0% | |
AAAGGAGCAAAAATGTTACG+GGG | + | chr3_1:73019075-73019094 | None:intergenic | 35.0% | |
GAAAGGAGCAAAAATGTTAC+GGG | + | chr3_1:73019076-73019095 | None:intergenic | 35.0% | |
GGAAAGGAGCAAAAATGTTA+CGG | + | chr3_1:73019077-73019096 | None:intergenic | 35.0% | |
GCACTGGATTAAAAAAGTGA+AGG | + | chr3_1:73019098-73019117 | None:intergenic | 35.0% | |
TTATCTATGATTGCAGCGAA+TGG | - | chr3_1:73019123-73019142 | Msa0373880:intron | 35.0% | |
TATCTATGATTGCAGCGAAT+GGG | - | chr3_1:73019124-73019143 | Msa0373880:intron | 35.0% | |
TAAACCTGTCCCCAAATAAA+GGG | + | chr3_1:73019168-73019187 | None:intergenic | 35.0% | |
TTAAACCTGTCCCCAAATAA+AGG | + | chr3_1:73019169-73019188 | None:intergenic | 35.0% | |
! | TATGGTTACATACACCGTTT+TGG | - | chr3_1:73019207-73019226 | Msa0373880:intron | 35.0% |
!! | TATTTAATTTTCTGGGGAGC+TGG | - | chr3_1:73019254-73019273 | Msa0373880:CDS | 35.0% |
!! | TTTTATTTGTAGAGCGGTCT+TGG | - | chr3_1:73019467-73019486 | Msa0373880:intron | 35.0% |
! | CAACGGACTTGATATTGAAT+CGG | - | chr3_1:73019546-73019565 | Msa0373880:intron | 35.0% |
! | AACGGACTTGATATTGAATC+GGG | - | chr3_1:73019547-73019566 | Msa0373880:intron | 35.0% |
CTTAGACCTTGTATTTCTTC+AGG | - | chr3_1:73019697-73019716 | Msa0373880:intron | 35.0% | |
ATTACTGAAGAAGAAAACGG+AGG | - | chr3_1:73019758-73019777 | Msa0373880:intron | 35.0% | |
! | TGTCTCTTCATCCATAGTTT+TGG | + | chr3_1:73019789-73019808 | None:intergenic | 35.0% |
AAACTATGGATGAAGAGACA+AGG | - | chr3_1:73019789-73019808 | Msa0373880:intron | 35.0% | |
! | AGAGTTTCAAGTCCAACATA+GGG | - | chr3_1:73020017-73020036 | Msa0373880:intron | 35.0% |
! | CCAAAAAGTTTTTACCCCTA+CGG | - | chr3_1:73020041-73020060 | Msa0373880:intron | 35.0% |
TACAATGACGAGGATTAAGA+TGG | - | chr3_1:73020160-73020179 | Msa0373880:CDS | 35.0% | |
TTTCATCTTTAGGCTGCAAT+GGG | + | chr3_1:73020334-73020353 | None:intergenic | 35.0% | |
! | TTTTCATCTTTAGGCTGCAA+TGG | + | chr3_1:73020335-73020354 | None:intergenic | 35.0% |
CAGCCTAAAGATGAAAAGAT+AGG | - | chr3_1:73020338-73020357 | Msa0373880:five_prime_UTR | 35.0% | |
ATGAAAAGATAGGCTACTAC+AGG | - | chr3_1:73020348-73020367 | Msa0373880:five_prime_UTR | 35.0% | |
ACAAAGCTAAAGCAGCTATA+TGG | + | chr3_1:73020522-73020541 | None:intergenic | 35.0% | |
!!! | CAATAAGTGCTTTTTTCCCC+CGG | - | chr3_1:73010089-73010108 | Msa0373880:three_prime_UTR | 40.0% |
!! | CTCCAATTTTGACCTCTTCA+AGG | - | chr3_1:73010163-73010182 | Msa0373880:three_prime_UTR | 40.0% |
TAATCGCGTTTGTGTGTGAA+AGG | - | chr3_1:73010270-73010289 | Msa0373880:three_prime_UTR | 40.0% | |
AATCGCGTTTGTGTGTGAAA+GGG | - | chr3_1:73010271-73010290 | Msa0373880:three_prime_UTR | 40.0% | |
AAAGGGAGAAAGAGAGATGT+GGG | - | chr3_1:73010288-73010307 | Msa0373880:three_prime_UTR | 40.0% | |
TGAGTTTGTCAGAATCACAG+TGG | + | chr3_1:73010642-73010661 | None:intergenic | 40.0% | |
! | CGGTGTTAAAGTCACTTATG+TGG | - | chr3_1:73010801-73010820 | Msa0373880:CDS | 40.0% |
GTTTATGTCATTGGGTCATG+AGG | + | chr3_1:73010861-73010880 | None:intergenic | 40.0% | |
GAAAGGAATGATGTACTGTG+TGG | - | chr3_1:73010964-73010983 | Msa0373880:intron | 40.0% | |
AAGCTGTCTGGTCCATTATA+AGG | + | chr3_1:73011034-73011053 | None:intergenic | 40.0% | |
! | TAAAAAGGCATGAAGCTGTC+TGG | + | chr3_1:73011046-73011065 | None:intergenic | 40.0% |
!!! | TCTTTTGGAGCTGGTCATAT+TGG | - | chr3_1:73011334-73011353 | Msa0373880:CDS | 40.0% |
AAACATGTGCAGCTCAGAAT+TGG | + | chr3_1:73011420-73011439 | None:intergenic | 40.0% | |
! | CTGAAGGTATGTTTGGGTTT+AGG | + | chr3_1:73011505-73011524 | None:intergenic | 40.0% |
!!! | GAATCCTTGTTTTTAGTCGG+TGG | - | chr3_1:73011524-73011543 | Msa0373880:intron | 40.0% |
!!! | TCAAGGTTTTGAAGATGCTG+GGG | - | chr3_1:73011944-73011963 | Msa0373880:intron | 40.0% |
GACTAGTGTGCATGTTAACT+TGG | - | chr3_1:73011992-73012011 | Msa0373880:intron | 40.0% | |
GATAAGAGGCTCAACACTAT+TGG | + | chr3_1:73012304-73012323 | None:intergenic | 40.0% | |
GTTGAGCCTCTTATCAGAAA+TGG | - | chr3_1:73012309-73012328 | Msa0373880:CDS | 40.0% | |
!! | TTTCCAACTCGAGGGTATTT+GGG | + | chr3_1:73012387-73012406 | None:intergenic | 40.0% |
ATTGGATTGATGCAAGGGAA+AGG | + | chr3_1:73012514-73012533 | None:intergenic | 40.0% | |
! | GATACTTTTGTAAGCAGGAG+TGG | - | chr3_1:73012826-73012845 | Msa0373880:intron | 40.0% |
AAGTCATGGCAAATCCCATA+AGG | + | chr3_1:73012855-73012874 | None:intergenic | 40.0% | |
GTTACTGGTGCATTTCTTCT+TGG | - | chr3_1:73012895-73012914 | Msa0373880:intron | 40.0% | |
! | GGTGCATTTCTTCTTGGTTT+TGG | - | chr3_1:73012901-73012920 | Msa0373880:intron | 40.0% |
! | GCATTTCTCCAGATGCTTTT+AGG | + | chr3_1:73012940-73012959 | None:intergenic | 40.0% |
TTCCCACAAAATTGCCCAAA+TGG | - | chr3_1:73012987-73013006 | Msa0373880:intron | 40.0% | |
! | AGCCATTTGGGCAATTTTGT+GGG | + | chr3_1:73012992-73013011 | None:intergenic | 40.0% |
ATCCAGTTTGACAGCCATTT+GGG | + | chr3_1:73013004-73013023 | None:intergenic | 40.0% | |
GCCATATAAACAAGAACAGG+TGG | + | chr3_1:73013208-73013227 | None:intergenic | 40.0% | |
GAACTTGAAATGAAGCCAAC+TGG | + | chr3_1:73013273-73013292 | None:intergenic | 40.0% | |
! | GCTTTTGACCAGTGTATTGT+TGG | - | chr3_1:73013436-73013455 | Msa0373880:CDS | 40.0% |
TTTGACCAGTGTATTGTTGG+CGG | - | chr3_1:73013439-73013458 | Msa0373880:CDS | 40.0% | |
TTATACCGCCAACAATACAC+TGG | + | chr3_1:73013447-73013466 | None:intergenic | 40.0% | |
GCGGTATAAGCAATGCAAAT+TGG | - | chr3_1:73013458-73013477 | Msa0373880:CDS | 40.0% | |
! | AAAACTACGTGTAGGTGTTG+GGG | + | chr3_1:73013618-73013637 | None:intergenic | 40.0% |
CAAAAACTACGTGTAGGTGT+TGG | + | chr3_1:73013620-73013639 | None:intergenic | 40.0% | |
! | CAACACCTACACGTAGTTTT+TGG | - | chr3_1:73013618-73013637 | Msa0373880:intron | 40.0% |
AAGCTCCAAAAACTACGTGT+AGG | + | chr3_1:73013626-73013645 | None:intergenic | 40.0% | |
GATCCTTCATTCAAACCACA+AGG | - | chr3_1:73013865-73013884 | Msa0373880:intron | 40.0% | |
TGACACAGATGAGAAGTCAA+TGG | - | chr3_1:73013918-73013937 | Msa0373880:intron | 40.0% | |
! | CTAAACTAAGGCGTCATCTT+CGG | - | chr3_1:73013941-73013960 | Msa0373880:intron | 40.0% |
!! | TATATATTTGGTAGTGGCCG+GGG | + | chr3_1:73014250-73014269 | None:intergenic | 40.0% |
CTGTCGTTGAAGGAAATCTA+TGG | + | chr3_1:73014346-73014365 | None:intergenic | 40.0% | |
TGAAAATTTGGGTAAGGTGG+GGG | + | chr3_1:73014571-73014590 | None:intergenic | 40.0% | |
GCATGAAAATTTGGGTAAGG+TGG | + | chr3_1:73014574-73014593 | None:intergenic | 40.0% | |
ATTCAAGCATCAGACCTGTT+CGG | - | chr3_1:73014613-73014632 | Msa0373880:intron | 40.0% | |
TTACACCAAATCTGCACTGT+CGG | - | chr3_1:73014813-73014832 | Msa0373880:intron | 40.0% | |
GTCGGAACTAATTGATCCTA+AGG | - | chr3_1:73014831-73014850 | Msa0373880:intron | 40.0% | |
ACATTAATCTGGGGACCAAT+TGG | - | chr3_1:73015011-73015030 | Msa0373880:intron | 40.0% | |
! | AGGGGGAGTGTAAAATTGAT+AGG | + | chr3_1:73015297-73015316 | None:intergenic | 40.0% |
CTTCAACAAGTTCAAGAAGC+AGG | - | chr3_1:73015354-73015373 | Msa0373880:intron | 40.0% | |
TATATATGAGTCAGGATCCG+TGG | + | chr3_1:73015499-73015518 | None:intergenic | 40.0% | |
AGAGGACATATCAAGTGAGA+GGG | - | chr3_1:73015532-73015551 | Msa0373880:intron | 40.0% | |
! | AGAGGGCTTTTTATTGTGAG+AGG | - | chr3_1:73015549-73015568 | Msa0373880:intron | 40.0% |
TGTGATTCTTGCCCAATTTC+TGG | + | chr3_1:73015692-73015711 | None:intergenic | 40.0% | |
GAAATTGGGCAAGAATCACA+TGG | - | chr3_1:73015692-73015711 | Msa0373880:intron | 40.0% | |
! | CCTTTTTGTACCTTCTTCCA+TGG | + | chr3_1:73015977-73015996 | None:intergenic | 40.0% |
! | CCATGGAAGAAGGTACAAAA+AGG | - | chr3_1:73015974-73015993 | Msa0373880:intron | 40.0% |
! | CAAAAAGGGTGTAGTTGCTT+TGG | - | chr3_1:73015989-73016008 | Msa0373880:intron | 40.0% |
TTAGGGTAGTTGAATCGATG+AGG | - | chr3_1:73016096-73016115 | Msa0373880:intron | 40.0% | |
! | GCAGATCTGGAATATGAGAA+GGG | - | chr3_1:73016139-73016158 | Msa0373880:CDS | 40.0% |
! | ATCTGGAATATGAGAAGGGA+AGG | - | chr3_1:73016143-73016162 | Msa0373880:CDS | 40.0% |
CACTGGCCAAATGTATAGTT+TGG | + | chr3_1:73016235-73016254 | None:intergenic | 40.0% | |
CCTCACAACAATTTGATCAC+TGG | + | chr3_1:73016252-73016271 | None:intergenic | 40.0% | |
CCAGTGATCAAATTGTTGTG+AGG | - | chr3_1:73016249-73016268 | Msa0373880:intron | 40.0% | |
TTGTTGTGAGGTGTGAAGTA+AGG | - | chr3_1:73016261-73016280 | Msa0373880:intron | 40.0% | |
TGTTGTGAGGTGTGAAGTAA+GGG | - | chr3_1:73016262-73016281 | Msa0373880:intron | 40.0% | |
AGTAAGGGAAAAGTCGAAAC+TGG | - | chr3_1:73016277-73016296 | Msa0373880:intron | 40.0% | |
GGAAAAGTCGAAACTGGAAT+GGG | - | chr3_1:73016283-73016302 | Msa0373880:intron | 40.0% | |
GAAAAGTCGAAACTGGAATG+GGG | - | chr3_1:73016284-73016303 | Msa0373880:intron | 40.0% | |
CTTTATTGTGAGAGGTGAGA+GGG | + | chr3_1:73016403-73016422 | None:intergenic | 40.0% | |
TCTCATATCAAAACCGAAGG+AGG | + | chr3_1:73016724-73016743 | None:intergenic | 40.0% | |
!! | GGTTAGAGGCATTGAAATTG+TGG | - | chr3_1:73016952-73016971 | Msa0373880:intron | 40.0% |
! | GAAACAAGTTGAGAAAGGCA+TGG | - | chr3_1:73017027-73017046 | Msa0373880:intron | 40.0% |
!! | AAAGGCATGGCTGTTTTACT+TGG | - | chr3_1:73017040-73017059 | Msa0373880:intron | 40.0% |
CCCCTATTTATAGGGATACA+AGG | - | chr3_1:73017361-73017380 | Msa0373880:intron | 40.0% | |
! | GGCCTTGTATCCCTATAAAT+AGG | + | chr3_1:73017366-73017385 | None:intergenic | 40.0% |
!!! | TGCTTATATTTTGGGACGGA+GGG | + | chr3_1:73017598-73017617 | None:intergenic | 40.0% |
!!! | TTGCTTATATTTTGGGACGG+AGG | + | chr3_1:73017692-73017711 | None:intergenic | 40.0% |
!!! | GATGGGCTTTGTTAGTGTTT+TGG | - | chr3_1:73017733-73017752 | Msa0373880:intron | 40.0% |
!!! | CTTACTTCCCTTTTGGCTTA+GGG | - | chr3_1:73017820-73017839 | Msa0373880:intron | 40.0% |
CAGATGCACATGTACATTAG+TGG | + | chr3_1:73018179-73018198 | None:intergenic | 40.0% | |
!! | TTAACTGAGCTGGTTTGTCT+GGG | + | chr3_1:73018254-73018273 | None:intergenic | 40.0% |
CAACCATCCTGGGAAAAAAT+AGG | + | chr3_1:73018382-73018401 | None:intergenic | 40.0% | |
! | ATGATATAGGGGGTGCATAA+CGG | + | chr3_1:73018406-73018425 | None:intergenic | 40.0% |
TCACAGCAGACAGTAATACA+TGG | + | chr3_1:73018573-73018592 | None:intergenic | 40.0% | |
TAGAAAAGTCCGCAATAAGC+TGG | - | chr3_1:73018799-73018818 | Msa0373880:intron | 40.0% | |
AGAAAAGTCCGCAATAAGCT+GGG | - | chr3_1:73018800-73018819 | Msa0373880:intron | 40.0% | |
ATCTATGATTGCAGCGAATG+GGG | - | chr3_1:73019125-73019144 | Msa0373880:intron | 40.0% | |
GAAGTTGCTTGCAACCAAAA+CGG | + | chr3_1:73019224-73019243 | None:intergenic | 40.0% | |
CAAAACTGAAGCAGAGGATA+TGG | - | chr3_1:73019291-73019310 | Msa0373880:intron | 40.0% | |
! | CCACTTGCTAGGAATTTCAA+CGG | - | chr3_1:73019529-73019548 | Msa0373880:intron | 40.0% |
TGAATCGGGTAACAACTATG+TGG | - | chr3_1:73019561-73019580 | Msa0373880:intron | 40.0% | |
CTGCAGCTAAAGAATCCATT+AGG | + | chr3_1:73019625-73019644 | None:intergenic | 40.0% | |
TAGCTGCAGTGTATGACATT+TGG | - | chr3_1:73019636-73019655 | Msa0373880:intron | 40.0% | |
ACCTTGTATTTCTTCAGGAG+AGG | - | chr3_1:73019702-73019721 | Msa0373880:intron | 40.0% | |
TCCTCTCCTGAAGAAATACA+AGG | + | chr3_1:73019706-73019725 | None:intergenic | 40.0% | |
GTATTTCTTCAGGAGAGGAA+CGG | - | chr3_1:73019707-73019726 | Msa0373880:intron | 40.0% | |
! | CGGAGGTATATCCAAAACTA+TGG | - | chr3_1:73019775-73019794 | Msa0373880:intron | 40.0% |
GATGAAGAGACAAGGAGATA+TGG | - | chr3_1:73019797-73019816 | Msa0373880:intron | 40.0% | |
TTCATCAAGCGCAGAATAAG+AGG | + | chr3_1:73019915-73019934 | None:intergenic | 40.0% | |
TCTTATTCTGCGCTTGATGA+AGG | - | chr3_1:73019914-73019933 | Msa0373880:intron | 40.0% | |
! | CAGAGTTTCAAGTCCAACAT+AGG | - | chr3_1:73020016-73020035 | Msa0373880:intron | 40.0% |
! | GAGTTTCAAGTCCAACATAG+GGG | - | chr3_1:73020018-73020037 | Msa0373880:intron | 40.0% |
!! | AAACTTTTTGGCCCCTATGT+TGG | + | chr3_1:73020032-73020051 | None:intergenic | 40.0% |
! | CCGTAGGGGTAAAAACTTTT+TGG | + | chr3_1:73020044-73020063 | None:intergenic | 40.0% |
! | ATTTTCCTGTGTTTGCCGTA+GGG | + | chr3_1:73020059-73020078 | None:intergenic | 40.0% |
! | TATTTTCCTGTGTTTGCCGT+AGG | + | chr3_1:73020060-73020079 | None:intergenic | 40.0% |
ACGGCAAACACAGGAAAATA+CGG | - | chr3_1:73020060-73020079 | Msa0373880:intron | 40.0% | |
CCTCGTCATTGTAAGTAACT+TGG | + | chr3_1:73020153-73020172 | None:intergenic | 40.0% | |
CCAAGTTACTTACAATGACG+AGG | - | chr3_1:73020150-73020169 | Msa0373880:CDS | 40.0% | |
TCAAAAAGGACTACAAGCAC+CGG | + | chr3_1:73020189-73020208 | None:intergenic | 40.0% | |
! | ATCATTTGGCAAGAGCATAC+AGG | - | chr3_1:73020217-73020236 | Msa0373880:CDS | 40.0% |
! | AAACAATGTTTTGCCTGGCT+TGG | - | chr3_1:73020572-73020591 | Msa0373880:five_prime_UTR | 40.0% |
CGCCTTGAAGAGGTCAAAAT+TGG | + | chr3_1:73010168-73010187 | None:intergenic | 45.0% | |
GAAAGGGAGAAAGAGAGATG+TGG | - | chr3_1:73010287-73010306 | Msa0373880:three_prime_UTR | 45.0% | |
TTGTTAGAGGAAGCGAGATC+AGG | + | chr3_1:73010321-73010340 | None:intergenic | 45.0% | |
GATCTCGCTTCCTCTAACAA+CGG | - | chr3_1:73010321-73010340 | Msa0373880:three_prime_UTR | 45.0% | |
ATCTCGCTTCCTCTAACAAC+GGG | - | chr3_1:73010322-73010341 | Msa0373880:three_prime_UTR | 45.0% | |
! | GAATGGTGCTTTTCACGTTG+AGG | - | chr3_1:73010344-73010363 | Msa0373880:three_prime_UTR | 45.0% |
AGCACGTATCTAGGAACATC+TGG | + | chr3_1:73010382-73010401 | None:intergenic | 45.0% | |
! | ACGGTGAAAAGCACGTATCT+AGG | + | chr3_1:73010391-73010410 | None:intergenic | 45.0% |
! | AGATACGTGCTTTTCACCGT+TGG | - | chr3_1:73010391-73010410 | Msa0373880:three_prime_UTR | 45.0% |
AGCAGGGACGAGAATGATAA+TGG | + | chr3_1:73010440-73010459 | None:intergenic | 45.0% | |
TTCTCGTCCCTGCTGATATT+TGG | - | chr3_1:73010446-73010465 | Msa0373880:CDS | 45.0% | |
TCTCGTCCCTGCTGATATTT+GGG | - | chr3_1:73010447-73010466 | Msa0373880:CDS | 45.0% | |
! | TGGTTGCTATTGACCCAATG+TGG | - | chr3_1:73010821-73010840 | Msa0373880:CDS | 45.0% |
TTGTAAGGGGCTTGTGTACA+TGG | - | chr3_1:73010883-73010902 | Msa0373880:intron | 45.0% | |
CTGTCTGGTCCATTATAAGG+AGG | + | chr3_1:73011031-73011050 | None:intergenic | 45.0% | |
GCTTCTCACAATGAGAATGG+AGG | - | chr3_1:73011303-73011322 | Msa0373880:CDS | 45.0% | |
!! | TGTTTGGGTTTAGGGCATTG+AGG | + | chr3_1:73011496-73011515 | None:intergenic | 45.0% |
! | CAGTCCACCGACTAAAAACA+AGG | + | chr3_1:73011531-73011550 | None:intergenic | 45.0% |
! | TATTTTCCTAAGCAGGGCTG+TGG | - | chr3_1:73011911-73011930 | Msa0373880:intron | 45.0% |
!!! | GTGGGATCCATTGGTCTTTT+CGG | - | chr3_1:73012029-73012048 | Msa0373880:intron | 45.0% |
TCATTATGATGCACAGGACC+TGG | - | chr3_1:73012063-73012082 | Msa0373880:intron | 45.0% | |
TAGGAGGATGAGAACAAACC+AGG | + | chr3_1:73012084-73012103 | None:intergenic | 45.0% | |
ACTTCCTACCGTATCCTCAA+TGG | - | chr3_1:73012209-73012228 | Msa0373880:intron | 45.0% | |
!! | TTCCAACTCGAGGGTATTTG+GGG | + | chr3_1:73012386-73012405 | None:intergenic | 45.0% |
!! | CTTTCCAACTCGAGGGTATT+TGG | + | chr3_1:73012388-73012407 | None:intergenic | 45.0% |
!! | TACCCTCGAGTTGGAAAGTA+AGG | - | chr3_1:73012390-73012409 | Msa0373880:CDS | 45.0% |
TGCCTTACTTTCCAACTCGA+GGG | + | chr3_1:73012395-73012414 | None:intergenic | 45.0% | |
TTGCCTTACTTTCCAACTCG+AGG | + | chr3_1:73012396-73012415 | None:intergenic | 45.0% | |
AAGTGTGAGAACTAGGCTCA+TGG | - | chr3_1:73012560-73012579 | Msa0373880:intron | 45.0% | |
AGTGTGAGAACTAGGCTCAT+GGG | - | chr3_1:73012561-73012580 | Msa0373880:intron | 45.0% | |
GCATCTGGAGAAATGCTGAT+TGG | - | chr3_1:73012944-73012963 | Msa0373880:intron | 45.0% | |
TGTGGGAAAGAACTTTCTGG+CGG | + | chr3_1:73012975-73012994 | None:intergenic | 45.0% | |
! | CAGCCATTTGGGCAATTTTG+TGG | + | chr3_1:73012993-73013012 | None:intergenic | 45.0% |
CATCCAGTTTGACAGCCATT+TGG | + | chr3_1:73013005-73013024 | None:intergenic | 45.0% | |
CAAATGTCACTCACTGACAC+TGG | + | chr3_1:73013368-73013387 | None:intergenic | 45.0% | |
!! | AAACTACGTGTAGGTGTTGG+GGG | + | chr3_1:73013617-73013636 | None:intergenic | 45.0% |
CATCTGCTTGGAAGTTGCTT+GGG | + | chr3_1:73013679-73013698 | None:intergenic | 45.0% | |
ACATCTGCTTGGAAGTTGCT+TGG | + | chr3_1:73013680-73013699 | None:intergenic | 45.0% | |
CCTTCATTCAAACCACAAGG+CGG | - | chr3_1:73013868-73013887 | Msa0373880:intron | 45.0% | |
CTTCATTCAAACCACAAGGC+GGG | - | chr3_1:73013869-73013888 | Msa0373880:intron | 45.0% | |
!! | CAAACCATCCAGTTGACTTG+CGG | + | chr3_1:73014464-73014483 | None:intergenic | 45.0% |
GAAAATTTGGGTAAGGTGGG+GGG | + | chr3_1:73014570-73014589 | None:intergenic | 45.0% | |
GCACTTACACCTAGTGTCAA+CGG | + | chr3_1:73014787-73014806 | None:intergenic | 45.0% | |
TAGTTCCGACAGTGCAGATT+TGG | + | chr3_1:73014821-73014840 | None:intergenic | 45.0% | |
GTTGGGATATTACGAGCCTT+AGG | + | chr3_1:73014850-73014869 | None:intergenic | 45.0% | |
CTCTGTTCACCTTTCTTCTC+CGG | - | chr3_1:73014939-73014958 | Msa0373880:intron | 45.0% | |
!! | AAAACAACGAAAGTGCCGAC+CGG | + | chr3_1:73014961-73014980 | None:intergenic | 45.0% |
TCGTATGAGCGGTTGAGATT+TGG | - | chr3_1:73015444-73015463 | Msa0373880:intron | 45.0% | |
TAACTTACACCTGGTGTCCA+CGG | - | chr3_1:73015479-73015498 | Msa0373880:intron | 45.0% | |
GAGAGGACATATCAAGTGAG+AGG | - | chr3_1:73015531-73015550 | Msa0373880:intron | 45.0% | |
GTTCATGAGGATCTACCCTT+GGG | + | chr3_1:73015920-73015939 | None:intergenic | 45.0% | |
GAACTTTGTAAGAGGCTCCA+TGG | - | chr3_1:73015957-73015976 | Msa0373880:CDS | 45.0% | |
! | AAAGGGTGTAGTTGCTTTGG+TGG | - | chr3_1:73015992-73016011 | Msa0373880:intron | 45.0% |
GGTAGTTGAATCGATGAGGA+AGG | - | chr3_1:73016100-73016119 | Msa0373880:intron | 45.0% | |
TCGATGAGGAAGGAGAGAAT+TGG | - | chr3_1:73016110-73016129 | Msa0373880:intron | 45.0% | |
CGATGAGGAAGGAGAGAATT+GGG | - | chr3_1:73016111-73016130 | Msa0373880:intron | 45.0% | |
GATGAGGAAGGAGAGAATTG+GGG | - | chr3_1:73016112-73016131 | Msa0373880:intron | 45.0% | |
! | GGCAGATCTGGAATATGAGA+AGG | - | chr3_1:73016138-73016157 | Msa0373880:CDS | 45.0% |
TGGAATATGAGAAGGGAAGG+AGG | - | chr3_1:73016146-73016165 | Msa0373880:CDS | 45.0% | |
GGGAAAAGTCGAAACTGGAA+TGG | - | chr3_1:73016282-73016301 | Msa0373880:intron | 45.0% | |
AAACTGGAATGGGGAGCAAA+AGG | - | chr3_1:73016293-73016312 | Msa0373880:intron | 45.0% | |
AACTGGAATGGGGAGCAAAA+GGG | - | chr3_1:73016294-73016313 | Msa0373880:intron | 45.0% | |
! | GCTTTATTGTGAGAGGTGAG+AGG | + | chr3_1:73016404-73016423 | None:intergenic | 45.0% |
!! | GAGAGGAGCTTTATTGTGAG+AGG | + | chr3_1:73016411-73016430 | None:intergenic | 45.0% |
! | ATGAGGGCATATCAAGTGAG+AGG | + | chr3_1:73016428-73016447 | None:intergenic | 45.0% |
AAGTAGCTCCTGTGTTCGAA+CGG | + | chr3_1:73017149-73017168 | None:intergenic | 45.0% | |
!!! | GCTTACTTCCCTTTTGGCTT+AGG | - | chr3_1:73017819-73017838 | Msa0373880:intron | 45.0% |
CGTACATCCCTAAGCCAAAA+GGG | + | chr3_1:73017830-73017849 | None:intergenic | 45.0% | |
ACGTACATCCCTAAGCCAAA+AGG | + | chr3_1:73017831-73017850 | None:intergenic | 45.0% | |
!! | GTTAACTGAGCTGGTTTGTC+TGG | + | chr3_1:73018255-73018274 | None:intergenic | 45.0% |
! | TGATATAGGGGGTGCATAAC+GGG | + | chr3_1:73018405-73018424 | None:intergenic | 45.0% |
TTCCTCAATCTCATTCGCCT+CGG | - | chr3_1:73018431-73018450 | Msa0373880:intron | 45.0% | |
!! | ACATCCGTCGACAGTTTTGT+TGG | + | chr3_1:73018546-73018565 | None:intergenic | 45.0% |
! | TGAAGAAAGCACACTAGGCA+AGG | + | chr3_1:73018748-73018767 | None:intergenic | 45.0% |
GTTTGGCACAACTTCTCTGA+AGG | - | chr3_1:73018774-73018793 | Msa0373880:intron | 45.0% | |
!! | GAGTGCATTATGGGAGTGTT+TGG | + | chr3_1:73018826-73018845 | None:intergenic | 45.0% |
! | ACAACGCCGTCCCTTTATTT+GGG | - | chr3_1:73019155-73019174 | Msa0373880:intron | 45.0% |
ACTGAAGCAGAGGATATGGA+TGG | - | chr3_1:73019295-73019314 | Msa0373880:intron | 45.0% | |
AGCAGAGGATATGGATGGTT+TGG | - | chr3_1:73019300-73019319 | Msa0373880:intron | 45.0% | |
! | ATGGATGGTTTGGATCCATC+CGG | - | chr3_1:73019310-73019329 | Msa0373880:intron | 45.0% |
! | CTTGAACAAGGGCGCAAAAT+CGG | - | chr3_1:73019490-73019509 | Msa0373880:intron | 45.0% |
! | TTGAACAAGGGCGCAAAATC+GGG | - | chr3_1:73019491-73019510 | Msa0373880:intron | 45.0% |
CCGTTGAAATTCCTAGCAAG+TGG | + | chr3_1:73019532-73019551 | None:intergenic | 45.0% | |
AGCAAGTACGCTGCAATTAG+AGG | - | chr3_1:73019842-73019861 | Msa0373880:intron | 45.0% | |
GCAAGTACGCTGCAATTAGA+GGG | - | chr3_1:73019843-73019862 | Msa0373880:intron | 45.0% | |
! | TTTTCCTGTGTTTGCCGTAG+GGG | + | chr3_1:73020058-73020077 | None:intergenic | 45.0% |
AGGAAAATACGGTCTCTCGT+GGG | - | chr3_1:73020071-73020090 | Msa0373880:intron | 45.0% | |
ACGAGGATTAAGATGGAAGC+CGG | - | chr3_1:73020167-73020186 | Msa0373880:CDS | 45.0% | |
GAACCATGTTCCCATAGAGT+CGG | + | chr3_1:73020459-73020478 | None:intergenic | 45.0% | |
!! | GATATATATATATATATATT+TGG | + | chr3_1:73014262-73014281 | None:intergenic | 5.0% |
!! | TTATATATATATATATATGA+GGG | + | chr3_1:73016444-73016463 | None:intergenic | 5.0% |
!! | TTTATATATATATATATATG+AGG | + | chr3_1:73016445-73016464 | None:intergenic | 5.0% |
!! | AAGAAAAATAATATTTAAAA+TGG | + | chr3_1:73018516-73018535 | None:intergenic | 5.0% |
!!! | AGTTTGTTGCCACCGCGTTT+TGG | + | chr3_1:73010118-73010137 | None:intergenic | 50.0% |
GCTTCCTCTAACAACGGGAA+TGG | - | chr3_1:73010327-73010346 | Msa0373880:three_prime_UTR | 50.0% | |
AGCACCATTCCCGTTGTTAG+AGG | + | chr3_1:73010334-73010353 | None:intergenic | 50.0% | |
! | TTCACGTTGAGGTACTTCGC+TGG | - | chr3_1:73010355-73010374 | Msa0373880:three_prime_UTR | 50.0% |
GTACCGCCCAAATATCAGCA+GGG | + | chr3_1:73010456-73010475 | None:intergenic | 50.0% | |
AGTACCGCCCAAATATCAGC+AGG | + | chr3_1:73010457-73010476 | None:intergenic | 50.0% | |
AGCCTGACGATCACCACATT+GGG | + | chr3_1:73010837-73010856 | None:intergenic | 50.0% | |
! | TGTGCCATTGAGGATACGGT+AGG | + | chr3_1:73012216-73012235 | None:intergenic | 50.0% |
! | CACGTGTGCCATTGAGGATA+CGG | + | chr3_1:73012220-73012239 | None:intergenic | 50.0% |
!! | TCCAACTCGAGGGTATTTGG+GGG | + | chr3_1:73012385-73012404 | None:intergenic | 50.0% |
! | GTGGGAAAGAACTTTCTGGC+GGG | + | chr3_1:73012974-73012993 | None:intergenic | 50.0% |
TGCCCAAATGGCTGTCAAAC+TGG | - | chr3_1:73012999-73013018 | Msa0373880:intron | 50.0% | |
!! | AACTACGTGTAGGTGTTGGG+GGG | + | chr3_1:73013616-73013635 | None:intergenic | 50.0% |
CTTCCAAGCAGATGTCCAAG+CGG | - | chr3_1:73013685-73013704 | Msa0373880:intron | 50.0% | |
TTCCAAGCAGATGTCCAAGC+GGG | - | chr3_1:73013686-73013705 | Msa0373880:intron | 50.0% | |
CCGCCTTGTGGTTTGAATGA+AGG | + | chr3_1:73013871-73013890 | None:intergenic | 50.0% | |
AAACCACAAGGCGGGCAATT+AGG | - | chr3_1:73013877-73013896 | Msa0373880:intron | 50.0% | |
AACCACAAGGCGGGCAATTA+GGG | - | chr3_1:73013878-73013897 | Msa0373880:intron | 50.0% | |
TCATCTTCGGAATGCTCGTG+AGG | - | chr3_1:73013954-73013973 | Msa0373880:intron | 50.0% | |
GTGAGCTTAGCTCAGTTGGT+TGG | - | chr3_1:73014188-73014207 | Msa0373880:intron | 50.0% | |
TGTACTGGAAGCCCTTGAGT+TGG | - | chr3_1:73014413-73014432 | Msa0373880:intron | 50.0% | |
TATGAACGCCGCAAGTCAAC+TGG | - | chr3_1:73014453-73014472 | Msa0373880:intron | 50.0% | |
AGTCAGGATCCGTTGACACT+AGG | - | chr3_1:73014775-73014794 | Msa0373880:intron | 50.0% | |
GTTCACCTTTCTTCTCCGGT+CGG | - | chr3_1:73014943-73014962 | Msa0373880:intron | 50.0% | |
GGTTCATGAGGATCTACCCT+TGG | + | chr3_1:73015921-73015940 | None:intergenic | 50.0% | |
GTAAGAGGCTCCATGGAAGA+AGG | - | chr3_1:73015964-73015983 | Msa0373880:CDS | 50.0% | |
GGAAGGAGAGAATTGGGGAA+AGG | - | chr3_1:73016117-73016136 | Msa0373880:CDS | 50.0% | |
GAATTGGGGAAAGGCAGATC+TGG | - | chr3_1:73016126-73016145 | Msa0373880:CDS | 50.0% | |
ACTGGAATGGGGAGCAAAAG+GGG | - | chr3_1:73016295-73016314 | Msa0373880:intron | 50.0% | |
AACACAGGAGCTACTTGTGC+AGG | - | chr3_1:73017153-73017172 | Msa0373880:intron | 50.0% | |
! | ACGGAGGGAGTATATCGGAT+AGG | + | chr3_1:73017583-73017602 | None:intergenic | 50.0% |
! | TTGGGACGGAGGGAGTATAT+CGG | + | chr3_1:73017588-73017607 | None:intergenic | 50.0% |
! | GAAAGCACACTAGGCAAGGT+TGG | + | chr3_1:73018744-73018763 | None:intergenic | 50.0% |
GTGTTTGGCCCAGCTTATTG+CGG | + | chr3_1:73018811-73018830 | None:intergenic | 50.0% | |
GACAACGCCGTCCCTTTATT+TGG | - | chr3_1:73019154-73019173 | Msa0373880:intron | 50.0% | |
! | CAACGCCGTCCCTTTATTTG+GGG | - | chr3_1:73019156-73019175 | Msa0373880:intron | 50.0% |
CCTGTCCCCAAATAAAGGGA+CGG | + | chr3_1:73019164-73019183 | None:intergenic | 50.0% | |
! | AGCGGTCTTGGCTTGAACAA+GGG | - | chr3_1:73019479-73019498 | Msa0373880:intron | 50.0% |
! | TGAACAAGGGCGCAAAATCG+GGG | - | chr3_1:73019492-73019511 | Msa0373880:intron | 50.0% |
AGCAGGTTGTTCCACTTGCT+AGG | - | chr3_1:73019518-73019537 | Msa0373880:intron | 50.0% | |
! | TGCAGCGTACTTGCTGCTTA+TGG | + | chr3_1:73019837-73019856 | None:intergenic | 50.0% |
TACGCTGCAATTAGAGGGCA+GGG | - | chr3_1:73019848-73019867 | Msa0373880:intron | 50.0% | |
! | TTCAGCTGGAGCACCATCTT+CGG | - | chr3_1:73019955-73019974 | Msa0373880:intron | 50.0% |
TTTACCCCTACGGCAAACAC+AGG | - | chr3_1:73020051-73020070 | Msa0373880:intron | 50.0% | |
CAGGAAAATACGGTCTCTCG+TGG | - | chr3_1:73020070-73020089 | Msa0373880:intron | 50.0% | |
CTCATCAAGTGACTCAGACG+AGG | + | chr3_1:73020098-73020117 | None:intergenic | 50.0% | |
TTCCCCCGGAAACCAAAACG+CGG | - | chr3_1:73010103-73010122 | Msa0373880:three_prime_UTR | 55.0% | |
!!! | TGCCACCGCGTTTTGGTTTC+CGG | + | chr3_1:73010111-73010130 | None:intergenic | 55.0% |
CGTCCCTGCTGATATTTGGG+CGG | - | chr3_1:73010450-73010469 | Msa0373880:CDS | 55.0% | |
GACCCAATGTGGTGATCGTC+AGG | - | chr3_1:73010832-73010851 | Msa0373880:CDS | 55.0% | |
GAGCCTGACGATCACCACAT+TGG | + | chr3_1:73010838-73010857 | None:intergenic | 55.0% | |
GCTGTGGCACCCCTTATTCA+AGG | - | chr3_1:73011927-73011946 | Msa0373880:intron | 55.0% | |
! | TGTCTGCACGTGTGCCATTG+AGG | + | chr3_1:73012226-73012245 | None:intergenic | 55.0% |
TCCCCCAAATACCCTCGAGT+TGG | - | chr3_1:73012381-73012400 | Msa0373880:CDS | 55.0% | |
AAGCAGGAGTGGGAGCCTTA+TGG | - | chr3_1:73012837-73012856 | Msa0373880:intron | 55.0% | |
! | AGCAGGAGTGGGAGCCTTAT+GGG | - | chr3_1:73012838-73012857 | Msa0373880:intron | 55.0% |
ATCCCGCTTGGACATCTGCT+TGG | + | chr3_1:73013691-73013710 | None:intergenic | 55.0% | |
AGGTCTCAAAGGATCCCGCT+TGG | + | chr3_1:73013703-73013722 | None:intergenic | 55.0% | |
ACCACAAGGCGGGCAATTAG+GGG | - | chr3_1:73013879-73013898 | Msa0373880:intron | 55.0% | |
CCAACTGAGCTAAGCTCACG+AGG | + | chr3_1:73014187-73014206 | None:intergenic | 55.0% | |
CCTCGTGAGCTTAGCTCAGT+TGG | - | chr3_1:73014184-73014203 | Msa0373880:intron | 55.0% | |
AAGGTCCGAGGTTCAAACCC+CGG | - | chr3_1:73014230-73014249 | Msa0373880:intron | 55.0% | |
AACGCCGCAAGTCAACTGGA+TGG | - | chr3_1:73014457-73014476 | Msa0373880:intron | 55.0% | |
AGCATCAGACCTGTTCGGAC+TGG | - | chr3_1:73014618-73014637 | Msa0373880:intron | 55.0% | |
!! | ACCTGTTCGGACTGGCAAGT+TGG | - | chr3_1:73014626-73014645 | Msa0373880:intron | 55.0% |
!! | CCTGTTCGGACTGGCAAGTT+GGG | - | chr3_1:73014627-73014646 | Msa0373880:intron | 55.0% |
!! | AAGTGCCGACCGGAGAAGAA+AGG | + | chr3_1:73014951-73014970 | None:intergenic | 55.0% |
GAGGGTTGAATCCTAGCCCT+TGG | - | chr3_1:73015575-73015594 | Msa0373880:intron | 55.0% | |
!! | GCATAACGGGCAACCATCCT+GGG | + | chr3_1:73018392-73018411 | None:intergenic | 55.0% |
!! | TGCATAACGGGCAACCATCC+TGG | + | chr3_1:73018393-73018412 | None:intergenic | 55.0% |
GACCGAGGCGAATGAGATTG+AGG | + | chr3_1:73018436-73018455 | None:intergenic | 55.0% | |
! | CCGTCCCTTTATTTGGGGAC+AGG | - | chr3_1:73019161-73019180 | Msa0373880:intron | 55.0% |
! | GAGCGGTCTTGGCTTGAACA+AGG | - | chr3_1:73019478-73019497 | Msa0373880:intron | 55.0% |
GTACGCTGCAATTAGAGGGC+AGG | - | chr3_1:73019847-73019866 | Msa0373880:intron | 55.0% | |
CTGCAATTAGAGGGCAGGGT+GGG | - | chr3_1:73019852-73019871 | Msa0373880:intron | 55.0% | |
! | TCAGCTGGAGCACCATCTTC+GGG | - | chr3_1:73019956-73019975 | Msa0373880:intron | 55.0% |
! | TGGAGCACCATCTTCGGGTT+TGG | - | chr3_1:73019961-73019980 | Msa0373880:intron | 55.0% |
GTCGAAGCCAAACCCGAAGA+TGG | + | chr3_1:73019971-73019990 | None:intergenic | 55.0% | |
!! | TGACCTTTCCGCCGACTCTA+TGG | - | chr3_1:73020445-73020464 | Msa0373880:five_prime_UTR | 55.0% |
!! | GACCTTTCCGCCGACTCTAT+GGG | - | chr3_1:73020446-73020465 | Msa0373880:five_prime_UTR | 55.0% |
TTCCCATAGAGTCGGCGGAA+AGG | + | chr3_1:73020451-73020470 | None:intergenic | 55.0% | |
CCATGTTCCCATAGAGTCGG+CGG | + | chr3_1:73020456-73020475 | None:intergenic | 55.0% | |
!!! | CACCGCGTTTTGGTTTCCGG+GGG | + | chr3_1:73010108-73010127 | None:intergenic | 60.0% |
!!! | CCACCGCGTTTTGGTTTCCG+GGG | + | chr3_1:73010109-73010128 | None:intergenic | 60.0% |
!!! | GCCACCGCGTTTTGGTTTCC+GGG | + | chr3_1:73010110-73010129 | None:intergenic | 60.0% |
TCCCCTAATTGCCCGCCTTG+TGG | + | chr3_1:73013883-73013902 | None:intergenic | 60.0% | |
AGTGGCCGGGGTTTGAACCT+CGG | + | chr3_1:73014238-73014257 | None:intergenic | 60.0% | |
CCCAACTTGCCAGTCCGAAC+AGG | + | chr3_1:73014630-73014649 | None:intergenic | 60.0% | |
CACCATCATCTGCTGCGAGG+GGG | + | chr3_1:73015314-73015333 | None:intergenic | 60.0% | |
CCACCATCATCTGCTGCGAG+GGG | + | chr3_1:73015315-73015334 | None:intergenic | 60.0% | |
GCCACCATCATCTGCTGCGA+GGG | + | chr3_1:73015316-73015335 | None:intergenic | 60.0% | |
AGTCAGGATCCGTGGACACC+AGG | + | chr3_1:73015491-73015510 | None:intergenic | 60.0% | |
GCGCAAAATCGGGGAAGAGC+AGG | - | chr3_1:73019501-73019520 | Msa0373880:intron | 60.0% | |
GCTGCAATTAGAGGGCAGGG+TGG | - | chr3_1:73019851-73019870 | Msa0373880:intron | 60.0% | |
!! | CCGCCGACTCTATGGGAACA+TGG | - | chr3_1:73020453-73020472 | Msa0373880:five_prime_UTR | 60.0% |
CCCCGGAAACCAAAACGCGG+TGG | - | chr3_1:73010106-73010125 | Msa0373880:three_prime_UTR | 65.0% | |
CCTCTTGGCGCGCCTTGAAG+AGG | + | chr3_1:73010178-73010197 | None:intergenic | 65.0% | |
CCTCTTCAAGGCGCGCCAAG+AGG | - | chr3_1:73010175-73010194 | Msa0373880:three_prime_UTR | 65.0% | |
CTTCAAGGCGCGCCAAGAGG+TGG | - | chr3_1:73010178-73010197 | Msa0373880:three_prime_UTR | 65.0% | |
CTCGCATCAGCGCCACCTCT+TGG | + | chr3_1:73010193-73010212 | None:intergenic | 65.0% | |
!! | ACGTGTAGGTGTTGGGGGGC+AGG | + | chr3_1:73013612-73013631 | None:intergenic | 65.0% |
CTCCCCCTCGCAGCAGATGA+TGG | - | chr3_1:73015309-73015328 | Msa0373880:intron | 65.0% | |
! | CCCCTCGCAGCAGATGATGG+TGG | - | chr3_1:73015312-73015331 | Msa0373880:intron | 65.0% |
GGCCACCATCATCTGCTGCG+AGG | + | chr3_1:73015317-73015336 | None:intergenic | 65.0% | |
! | GGGGTGCCACAGCCCTGCTT+AGG | + | chr3_1:73011920-73011939 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 73009991 | 73020600 | 73009991 | ID=Msa0373880;Name=Msa0373880 |
chr3_1 | mRNA | 73009991 | 73020600 | 73009991 | ID=Msa0373880-mRNA-1;Parent=Msa0373880;Name=Msa0373880-mRNA-1;_AED=0.10;_eAED=0.10;_QI=313|1|1|1|1|1|14|423|720 |
chr3_1 | exon | 73009991 | 73010872 | 73009991 | ID=Msa0373880-mRNA-1:exon:16561;Parent=Msa0373880-mRNA-1 |
chr3_1 | exon | 73011009 | 73011112 | 73011009 | ID=Msa0373880-mRNA-1:exon:16560;Parent=Msa0373880-mRNA-1 |
chr3_1 | exon | 73011239 | 73011452 | 73011239 | ID=Msa0373880-mRNA-1:exon:16559;Parent=Msa0373880-mRNA-1 |
chr3_1 | exon | 73012110 | 73012197 | 73012110 | ID=Msa0373880-mRNA-1:exon:16558;Parent=Msa0373880-mRNA-1 |
chr3_1 | exon | 73012300 | 73012430 | 73012300 | ID=Msa0373880-mRNA-1:exon:16557;Parent=Msa0373880-mRNA-1 |
chr3_1 | exon | 73013417 | 73013589 | 73013417 | ID=Msa0373880-mRNA-1:exon:16556;Parent=Msa0373880-mRNA-1 |
chr3_1 | exon | 73015922 | 73015986 | 73015922 | ID=Msa0373880-mRNA-1:exon:16555;Parent=Msa0373880-mRNA-1 |
chr3_1 | exon | 73016113 | 73016193 | 73016113 | ID=Msa0373880-mRNA-1:exon:16554;Parent=Msa0373880-mRNA-1 |
chr3_1 | exon | 73016596 | 73016735 | 73016596 | ID=Msa0373880-mRNA-1:exon:16553;Parent=Msa0373880-mRNA-1 |
chr3_1 | exon | 73016833 | 73016919 | 73016833 | ID=Msa0373880-mRNA-1:exon:16552;Parent=Msa0373880-mRNA-1 |
chr3_1 | exon | 73017535 | 73017748 | 73017535 | ID=Msa0373880-mRNA-1:exon:16551;Parent=Msa0373880-mRNA-1 |
chr3_1 | exon | 73018507 | 73018665 | 73018507 | ID=Msa0373880-mRNA-1:exon:16550;Parent=Msa0373880-mRNA-1 |
chr3_1 | exon | 73019215 | 73019294 | 73019215 | ID=Msa0373880-mRNA-1:exon:16549;Parent=Msa0373880-mRNA-1 |
chr3_1 | exon | 73020120 | 73020600 | 73020120 | ID=Msa0373880-mRNA-1:exon:16548;Parent=Msa0373880-mRNA-1 |
chr3_1 | five_prime_UTR | 73020288 | 73020600 | 73020288 | ID=Msa0373880-mRNA-1:five_prime_utr;Parent=Msa0373880-mRNA-1 |
chr3_1 | CDS | 73020120 | 73020287 | 73020120 | ID=Msa0373880-mRNA-1:cds;Parent=Msa0373880-mRNA-1 |
chr3_1 | CDS | 73019215 | 73019294 | 73019215 | ID=Msa0373880-mRNA-1:cds;Parent=Msa0373880-mRNA-1 |
chr3_1 | CDS | 73018507 | 73018665 | 73018507 | ID=Msa0373880-mRNA-1:cds;Parent=Msa0373880-mRNA-1 |
chr3_1 | CDS | 73017535 | 73017748 | 73017535 | ID=Msa0373880-mRNA-1:cds;Parent=Msa0373880-mRNA-1 |
chr3_1 | CDS | 73016833 | 73016919 | 73016833 | ID=Msa0373880-mRNA-1:cds;Parent=Msa0373880-mRNA-1 |
chr3_1 | CDS | 73016596 | 73016735 | 73016596 | ID=Msa0373880-mRNA-1:cds;Parent=Msa0373880-mRNA-1 |
chr3_1 | CDS | 73016113 | 73016193 | 73016113 | ID=Msa0373880-mRNA-1:cds;Parent=Msa0373880-mRNA-1 |
chr3_1 | CDS | 73015922 | 73015986 | 73015922 | ID=Msa0373880-mRNA-1:cds;Parent=Msa0373880-mRNA-1 |
chr3_1 | CDS | 73013417 | 73013589 | 73013417 | ID=Msa0373880-mRNA-1:cds;Parent=Msa0373880-mRNA-1 |
chr3_1 | CDS | 73012300 | 73012430 | 73012300 | ID=Msa0373880-mRNA-1:cds;Parent=Msa0373880-mRNA-1 |
chr3_1 | CDS | 73012110 | 73012197 | 73012110 | ID=Msa0373880-mRNA-1:cds;Parent=Msa0373880-mRNA-1 |
chr3_1 | CDS | 73011239 | 73011452 | 73011239 | ID=Msa0373880-mRNA-1:cds;Parent=Msa0373880-mRNA-1 |
chr3_1 | CDS | 73011009 | 73011112 | 73011009 | ID=Msa0373880-mRNA-1:cds;Parent=Msa0373880-mRNA-1 |
chr3_1 | CDS | 73010414 | 73010872 | 73010414 | ID=Msa0373880-mRNA-1:cds;Parent=Msa0373880-mRNA-1 |
chr3_1 | three_prime_UTR | 73009991 | 73010413 | 73009991 | ID=Msa0373880-mRNA-1:three_prime_utr;Parent=Msa0373880-mRNA-1 |
Gene Sequence |
Protein sequence |