AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0473380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0473380 MtrunA17_Chr3g0129221 93.215 339 6 3 1 324 16 352 0.0 635
Msa0473380 MtrunA17_Chr8g0348991 30.196 255 148 9 1 235 32 276 6.33e-25 103
Msa0473380 MtrunA17_Chr4g0063531 30.488 246 157 8 1 235 74 316 8.64e-20 89.7
Msa0473380 MtrunA17_Chr2g0285851 28.736 261 161 9 1 241 59 314 1.15e-19 89.4
Msa0473380 MtrunA17_Chr8g0378511 27.935 247 162 8 1 235 84 326 1.81e-17 83.2
Msa0473380 MtrunA17_Chr3g0115401 23.052 308 163 7 1 235 50 356 1.82e-15 77.0
Msa0473380 MtrunA17_Chr8g0377241 27.111 225 144 7 1 209 58 278 2.93e-15 76.3
Msa0473380 MtrunA17_Chr2g0278921 21.935 310 167 6 1 235 50 359 2.09e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0473380 AT2G21950.1 54.624 346 129 7 1 323 27 367 2.94e-128 372
Msa0473380 AT4G39550.1 36.712 365 180 12 1 322 30 386 3.17e-61 201
Msa0473380 AT4G39580.1 35.613 351 187 12 1 322 29 369 2.85e-57 190
Msa0473380 AT4G39240.1 32.857 350 189 11 1 323 40 370 3.68e-53 179
Msa0473380 AT5G49000.2 34.286 350 189 14 1 321 28 365 4.79e-48 166
Msa0473380 AT4G23580.1 35.097 359 181 16 1 317 22 370 3.81e-47 164
Msa0473380 AT4G33900.1 34.659 352 179 15 1 312 18 358 1.49e-46 162
Msa0473380 AT4G39590.1 35.537 363 177 18 1 320 44 392 2.41e-46 162
Msa0473380 AT4G19870.2 31.436 369 198 9 1 323 36 395 3.03e-46 162
Msa0473380 AT4G19870.1 31.436 369 198 9 1 323 36 395 3.03e-46 162
Msa0473380 AT4G19330.1 31.680 363 197 12 1 328 37 383 1.46e-44 157
Msa0473380 AT4G11770.1 32.143 392 177 16 1 322 18 390 3.31e-44 156
Msa0473380 AT4G39600.1 32.869 359 187 15 1 322 20 361 1.28e-43 154
Msa0473380 AT5G48990.1 32.133 361 187 13 1 321 23 365 1.43e-43 154
Msa0473380 AT4G39600.2 32.869 359 187 15 1 322 31 372 1.64e-43 154
Msa0473380 AT4G14905.1 30.294 340 193 10 1 314 37 358 1.93e-43 154
Msa0473380 AT4G14905.2 30.294 340 193 10 1 314 37 358 1.93e-43 154
Msa0473380 AT4G29370.1 30.595 353 202 12 1 322 32 372 3.07e-42 151
Msa0473380 AT3G43710.1 33.038 339 195 11 1 314 32 363 3.19e-41 148
Msa0473380 AT2G29600.1 33.432 338 183 15 1 305 64 392 3.91e-41 149
Msa0473380 AT2G29810.1 33.724 341 194 12 1 316 38 371 1.87e-40 146
Msa0473380 AT1G60570.1 33.626 342 191 13 1 312 28 363 4.54e-40 145
Msa0473380 AT4G34170.1 33.677 291 161 10 1 277 18 290 8.28e-40 142
Msa0473380 AT2G29830.1 32.132 333 177 13 7 305 42 359 1.42e-39 144
Msa0473380 AT4G39290.1 30.447 358 196 12 1 322 19 359 1.78e-39 143
Msa0473380 AT4G35120.1 32.676 355 206 12 1 324 33 385 3.14e-39 143
Msa0473380 AT2G29770.1 32.558 344 187 14 10 320 48 379 3.21e-38 140
Msa0473380 AT4G38940.1 31.700 347 187 12 1 313 27 357 2.88e-37 137
Msa0473380 AT2G44030.1 32.033 359 198 13 1 327 25 369 5.27e-37 137
Msa0473380 AT4G39756.1 30.471 361 200 15 1 325 26 371 2.79e-36 135
Msa0473380 AT4G39570.1 31.956 363 197 14 1 323 38 390 3.46e-36 135
Msa0473380 AT1G19930.1 32.362 343 168 10 1 312 17 326 8.15e-36 133
Msa0473380 AT3G27910.1 34.902 255 133 9 90 323 47 289 9.32e-36 132
Msa0473380 AT4G11750.1 30.607 379 194 15 1 322 14 380 1.16e-35 134
Msa0473380 AT4G19865.1 30.055 366 200 12 1 323 36 388 1.50e-35 133
Msa0473380 AT3G06570.1 31.405 363 196 13 1 321 32 383 2.24e-35 133
Msa0473380 AT5G49000.1 31.157 337 173 14 1 321 28 321 3.19e-35 131
Msa0473380 AT5G03000.1 34.259 324 168 13 1 313 46 335 6.40e-35 131
Msa0473380 AT4G39560.2 39.394 231 126 7 1 220 33 260 6.68e-35 129
Msa0473380 AT4G39560.1 39.394 231 126 7 1 220 33 260 6.68e-35 129
Msa0473380 AT1G19470.1 32.194 351 198 15 6 324 66 408 7.11e-35 132
Msa0473380 AT5G48980.1 31.565 377 180 17 1 321 38 392 7.35e-35 132
Msa0473380 AT3G46050.1 33.628 339 182 13 1 313 24 345 1.39e-34 130
Msa0473380 AT5G02980.1 31.778 343 158 10 1 313 20 316 1.59e-34 129
Msa0473380 AT5G38680.1 31.765 340 186 12 4 316 25 345 2.00e-34 129
Msa0473380 AT1G61540.1 32.000 375 187 18 1 321 33 393 2.98e-34 130
Msa0473380 AT2G21680.1 30.964 394 187 17 1 323 45 424 5.11e-34 130
Msa0473380 AT5G51250.1 32.113 355 197 13 1 316 7 356 1.17e-33 128
Msa0473380 AT2G29780.1 31.307 329 170 10 7 296 57 368 2.87e-33 127
Msa0473380 AT4G19250.1 34.298 242 129 9 102 328 2 228 5.58e-33 122
Msa0473380 AT1G19460.1 30.994 342 194 13 6 312 66 400 1.32e-32 126
Msa0473380 AT2G29780.2 32.143 308 159 10 7 296 57 332 1.36e-32 125
Msa0473380 AT4G39760.1 29.363 361 204 15 1 326 23 367 2.40e-32 124
Msa0473380 AT5G39560.1 31.234 381 196 16 1 328 35 402 6.42e-32 124
Msa0473380 AT2G29800.1 31.395 344 191 12 5 315 70 401 1.53e-31 123
Msa0473380 AT4G11745.1 34.387 253 128 12 92 320 36 274 1.81e-31 120
Msa0473380 AT2G29820.1 29.755 326 188 11 7 305 53 364 1.20e-30 120
Msa0473380 AT2G22030.1 30.939 362 196 16 1 323 32 378 1.93e-29 117
Msa0473380 AT2G44630.1 30.675 326 182 11 1 295 30 342 7.46e-29 115
Msa0473380 AT5G28180.1 27.809 356 183 15 1 329 43 351 8.86e-29 114
Msa0473380 AT5G28160.1 27.616 344 186 12 1 322 16 318 2.06e-27 110
Msa0473380 AT5G03020.1 30.409 342 206 11 1 331 23 343 5.51e-26 106
Msa0473380 AT2G22050.2 35.065 231 115 12 1 208 37 255 5.95e-26 104
Msa0473380 AT4G25710.1 29.692 357 199 12 1 316 33 378 6.81e-26 107
Msa0473380 AT2G29860.1 36.082 194 112 6 5 191 30 218 2.87e-25 102
Msa0473380 AT2G22050.1 35.242 227 112 12 1 204 37 251 2.96e-25 102
Msa0473380 AT3G24610.1 27.793 367 163 12 2 314 35 353 3.35e-23 99.4
Msa0473380 AT2G03460.1 30.901 233 139 7 109 322 21 250 7.60e-23 96.3
Msa0473380 AT1G55270.1 30.364 247 156 7 1 235 85 327 4.55e-22 97.1
Msa0473380 AT2G44700.1 28.107 338 208 13 7 323 40 363 2.55e-21 94.0
Msa0473380 AT3G10510.1 27.350 351 188 15 1 305 21 350 1.15e-20 92.0
Msa0473380 AT4G02310.1 29.191 346 199 16 1 322 19 342 1.36e-20 91.7
Msa0473380 AT3G08810.1 27.246 345 190 11 1 321 29 336 7.74e-20 89.4
Msa0473380 AT2G41360.1 26.975 367 209 18 1 323 17 368 8.85e-20 89.7
Msa0473380 AT4G25710.2 30.638 235 141 5 1 213 33 267 3.87e-19 86.3
Msa0473380 AT5G02995.1 28.758 306 191 9 14 304 2 295 5.92e-19 86.7
Msa0473380 AT3G61350.2 27.126 247 162 9 1 235 28 268 1.85e-18 85.9
Msa0473380 AT3G61350.1 27.126 247 162 9 1 235 28 268 1.85e-18 85.9
Msa0473380 AT4G36840.1 28.926 242 133 9 123 331 1 236 3.54e-18 82.8
Msa0473380 AT5G38670.1 26.687 326 179 15 1 321 14 284 2.00e-17 81.6
Msa0473380 AT1G67480.3 29.778 225 138 8 1 209 46 266 3.08e-16 79.3
Msa0473380 AT1G67480.1 29.778 225 138 8 1 209 46 266 3.08e-16 79.3
Msa0473380 AT1G67480.2 29.778 225 138 8 1 209 46 266 3.08e-16 79.3
Msa0473380 AT1G30090.1 27.969 261 163 9 1 241 60 315 9.69e-15 75.1
Msa0473380 AT2G45406.1 42.169 83 46 2 94 175 1 82 2.43e-14 69.3
Msa0473380 AT3G63220.1 27.381 252 158 8 2 236 12 255 5.58e-14 72.4
Msa0473380 AT3G63220.3 27.381 252 158 8 2 236 19 262 6.16e-14 72.4
Msa0473380 AT3G63220.2 27.381 252 158 8 2 236 19 262 6.16e-14 72.4
Msa0473380 AT4G36840.2 29.126 206 109 8 123 295 1 202 7.29e-14 70.1
Msa0473380 AT5G02990.1 35.556 135 83 2 1 131 24 158 1.89e-13 67.8
Msa0473380 AT1G27420.1 25.940 266 163 10 1 248 17 266 2.51e-13 70.5

Find 159 sgRNAs with CRISPR-Local

Find 452 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTATTGCTATGATTATTT+AGG 0.101723 3_3:+75994557 Msa0473380:CDS
TGGGAAATTGGTTGTGGTTT+GGG 0.195904 3_3:+75994685 Msa0473380:CDS
CTTAACTATTTCGCACAAAT+TGG 0.211618 3_3:+75996119 Msa0473380:three_prime_UTR
ATCCATTTCTCACGAATTTC+TGG 0.252013 3_3:-75994386 None:intergenic
GACCCGTGCAAGGCAGTTTA+TGG 0.265673 3_3:-75993874 None:intergenic
TGTATTGCTATGATTATTTA+GGG 0.266313 3_3:+75994558 Msa0473380:CDS
TGATTATTTAGGGAAAATTA+AGG 0.267251 3_3:+75994568 Msa0473380:CDS
GTGGGAAATTGGTTGTGGTT+TGG 0.275006 3_3:+75994684 Msa0473380:CDS
CTCTCCCACGCTCCATTATA+AGG 0.279859 3_3:-75994476 None:intergenic
ATGATAGAAAACGCAAATAA+AGG 0.298035 3_3:-75996066 None:intergenic
GGCTGATGTTGGTGGGAAAT+TGG 0.300862 3_3:+75994673 Msa0473380:CDS
AAGGAAGAGGAGGGAGAGGG+AGG 0.303836 3_3:-75994076 None:intergenic
AATTGTGGGGTGAAGTTTGT+TGG 0.325029 3_3:+75994804 Msa0473380:CDS
CTTTCCCAGCGGTTGGTAAC+AGG 0.327535 3_3:-75994350 None:intergenic
GTTGGGAGGGAGCTTGATTT+AGG 0.327637 3_3:+75994500 Msa0473380:CDS
GGGGAAGGAAGAGGAGGGAG+AGG 0.332205 3_3:-75994080 None:intergenic
GTGGAGAAGAGAGGAGAGAA+TGG 0.338796 3_3:-75993941 None:intergenic
CTTCAACTACGTGGAACTTA+AGG 0.342373 3_3:-75996096 None:intergenic
CTATGCAATCATGAGGTGTT+TGG 0.345216 3_3:-75995842 None:intergenic
TATGATTTATGACACATCTA+TGG 0.348075 3_3:-75996040 None:intergenic
CTCCGACCAATTTGCTGATC+TGG 0.348732 3_3:-75994318 None:intergenic
GAGGAGAGAATGGATTGGTT+TGG 0.385212 3_3:-75993931 None:intergenic
TATGCAATCATGAGGTGTTT+GGG 0.386927 3_3:-75995841 None:intergenic
CGCCACCCGCATGGAGGGAC+CGG 0.390576 3_3:-75994222 None:intergenic
CGGGGAGCCAGCGGTGGAAT+CGG 0.393995 3_3:-75994202 None:intergenic
GGAGGAGACGGTGGTTATTG+TGG 0.394778 3_3:-75994058 None:intergenic
GAGGAGGGAGAGGGAGGAGA+CGG 0.398264 3_3:-75994070 None:intergenic
CACCAGAAATTCGTGAGAAA+TGG 0.399575 3_3:+75994384 Msa0473380:CDS
AGGGGAAAGAAATGGAGATT+TGG 0.400105 3_3:+75994738 Msa0473380:CDS
TATAACTGCTATCAAATTGT+TGG 0.409886 3_3:+75996213 Msa0473380:three_prime_UTR
GAGAGAGGTAGAGGATGTGT+TGG 0.414107 3_3:-75993998 None:intergenic
TTGATTGCCGATTCCACCGC+TGG 0.415692 3_3:+75994195 Msa0473380:CDS
TATTGTGGAGGGTGAAGAAT+TGG 0.417411 3_3:-75994043 None:intergenic
GAATAAGGATGGGGAATTGT+GGG 0.418586 3_3:+75994790 Msa0473380:CDS
TATGAATAATGCTCAAGTAC+TGG 0.419340 3_3:+75995930 Msa0473380:three_prime_UTR
TGAACAATGGAAGATCCTTT+AGG 0.424469 3_3:-75994848 None:intergenic
ATCAAAATTGCTGGTTGTAA+TGG 0.426053 3_3:+75996182 Msa0473380:three_prime_UTR
AATGTTCTTTCTGTTCCTAA+AGG 0.426640 3_3:+75994833 Msa0473380:CDS
GATTATTTAGGGAAAATTAA+GGG 0.427665 3_3:+75994569 Msa0473380:CDS
TGATAGAAAACGCAAATAAA+GGG 0.432589 3_3:-75996065 None:intergenic
CGTGTCATTTATTGCTCCAC+TGG 0.439557 3_3:+75995905 Msa0473380:three_prime_UTR
TTGGTTTGGAAACGAGGGTG+AGG 0.443707 3_3:-75993917 None:intergenic
ATGGAGCGTGGGAGAGCGTT+GGG 0.446205 3_3:+75994483 Msa0473380:CDS
ATTATGACTATCAAAATTGC+TGG 0.446957 3_3:+75996173 Msa0473380:three_prime_UTR
ATGTACCATCTCGTCATGTA+TGG 0.447118 3_3:+75994168 Msa0473380:CDS
GCGCGTGAATTCGCAGCTGC+TGG 0.448675 3_3:+75994242 Msa0473380:CDS
CGATTCCACCGCTGGCTCCC+CGG 0.454099 3_3:+75994203 Msa0473380:CDS
TAGAGGATGTGTTGGGTGGA+AGG 0.455700 3_3:-75993990 None:intergenic
GAGGGAGAGGGAGGAGACGG+TGG 0.459896 3_3:-75994067 None:intergenic
AAGAAGAAGAAGAATAAGGA+TGG 0.461286 3_3:+75994779 Msa0473380:CDS
GGAGGGAGCTTGATTTAGGT+TGG 0.464558 3_3:+75994504 Msa0473380:CDS
GGGAAGGAAGAGGAGGGAGA+GGG 0.467938 3_3:-75994079 None:intergenic
GCGTAAGCGGAGCCGATTGT+AGG 0.471244 3_3:-75994101 None:intergenic
CGTAAGCGGAGCCGATTGTA+GGG 0.471976 3_3:-75994100 None:intergenic
AGAATAAGGATGGGGAATTG+TGG 0.475295 3_3:+75994789 Msa0473380:CDS
GTGTGCGGAGAGAGAGGTAG+AGG 0.475726 3_3:-75994007 None:intergenic
TGTTGGTGGGAAATTGGTTG+TGG 0.476458 3_3:+75994679 Msa0473380:CDS
CCTCTTCCTTCCCCTACAAT+CGG 0.477902 3_3:+75994089 Msa0473380:CDS
AATGCTCAAGTACTGGGCTT+CGG 0.490081 3_3:+75995937 Msa0473380:three_prime_UTR
TCGATCCTGTTACCAACCGC+TGG 0.491929 3_3:+75994345 Msa0473380:CDS
AGAGGATGTGTTGGGTGGAA+GGG 0.494197 3_3:-75993989 None:intergenic
AGCGGTGGAATCGGCAATCA+AGG 0.496819 3_3:-75994193 None:intergenic
AAATAAGAAGGGGAAAGAAA+TGG 0.497591 3_3:+75994730 Msa0473380:CDS
GCTCCCCGGTCCCTCCATGC+GGG 0.498399 3_3:+75994217 Msa0473380:CDS
TGGTTTGGAAACGAGGGTGA+GGG 0.501416 3_3:-75993916 None:intergenic
GCCACCCGCATGGAGGGACC+GGG 0.502655 3_3:-75994221 None:intergenic
AGGGTTGTGTGGTGAGAGCG+TGG 0.503990 3_3:-75993897 None:intergenic
TCACGAATTTCTGGTGGACT+AGG 0.504253 3_3:-75994377 None:intergenic
GAAGAGAGGAGAGAATGGAT+TGG 0.505986 3_3:-75993936 None:intergenic
GTTTACCAAGGTTTCTGTGT+GGG 0.506144 3_3:+75994642 Msa0473380:CDS
AGGGACCGGGGAGCCAGCGG+TGG 0.509897 3_3:-75994208 None:intergenic
GGGAGAGCAACTGTTGTGGA+TGG 0.510495 3_3:+75994530 Msa0473380:CDS
GCTACAATGGCTGATGTTGG+TGG 0.511043 3_3:+75994665 Msa0473380:CDS
GAATTTGAATGCAAATAAGA+AGG 0.511518 3_3:+75994718 Msa0473380:CDS
CACGCTAGCGCGGTCGTAGA+CGG 0.513221 3_3:+75994410 Msa0473380:CDS
AGAGAGGTAGAGGATGTGTT+GGG 0.517370 3_3:-75993997 None:intergenic
AATTTGAATGCAAATAAGAA+GGG 0.517396 3_3:+75994719 Msa0473380:CDS
ATGAATAATGCTCAAGTACT+GGG 0.517583 3_3:+75995931 Msa0473380:three_prime_UTR
TTGTGGTTTGGGAGTGTCAA+AGG 0.519615 3_3:+75994696 Msa0473380:CDS
CATTTCTCACGAATTTCTGG+TGG 0.520076 3_3:-75994383 None:intergenic
GGTGAAGAATTGGAGAGAGG+TGG 0.521152 3_3:-75994033 None:intergenic
GTTTCTGTGTGGGGCTACAA+TGG 0.522064 3_3:+75994652 Msa0473380:CDS
GATTGCATAGAATTTCTGCT+TGG 0.522998 3_3:+75995855 Msa0473380:exon
CCGATTGTAGGGGAAGGAAG+AGG 0.526253 3_3:-75994089 None:intergenic
AATGGATTGGTTTGGAAACG+AGG 0.527115 3_3:-75993923 None:intergenic
CGTCATCGGTGGTTGCGTGC+CGG 0.527892 3_3:+75994286 Msa0473380:CDS
GTTTGGGATCTTGATCCTGC+GGG 0.532007 3_3:-75995825 None:intergenic
GAGGTAGAGGATGTGTTGGG+TGG 0.532415 3_3:-75993994 None:intergenic
TGAAGAAGAGTGGAGAAGAG+AGG 0.534364 3_3:-75993950 None:intergenic
GGGGCTACAATGGCTGATGT+TGG 0.535073 3_3:+75994662 Msa0473380:CDS
AGAAGAAGAAGAATAAGGAT+GGG 0.535671 3_3:+75994780 Msa0473380:CDS
TTGGTGTGTATGTATTCAGT+TGG 0.536908 3_3:+75996232 Msa0473380:three_prime_UTR
TAGCCATAAACTGCCTTGCA+CGG 0.537984 3_3:+75993871 Msa0473380:CDS
AATGGAGCGTGGGAGAGCGT+TGG 0.540307 3_3:+75994482 Msa0473380:CDS
TGGAGCGTGTGCGGAGAGAG+AGG 0.541247 3_3:-75994013 None:intergenic
CAGCTGCTGGTGTTATCGAC+GGG 0.541290 3_3:+75994255 Msa0473380:CDS
TTTACCAAGGTTTCTGTGTG+GGG 0.550464 3_3:+75994643 Msa0473380:CDS
TCACGCGCCACCCGCATGGA+GGG 0.550890 3_3:-75994227 None:intergenic
AGCTTGATTTAGGTTGGCGC+GGG 0.552408 3_3:+75994510 Msa0473380:CDS
AGGAACACTTTCCCAGCGGT+TGG 0.557279 3_3:-75994357 None:intergenic
GGAGACGGTGGTTATTGTGG+AGG 0.557706 3_3:-75994055 None:intergenic
CTACAATGGCTGATGTTGGT+GGG 0.559479 3_3:+75994666 Msa0473380:CDS
TGGAGGGACCGGGGAGCCAG+CGG 0.559843 3_3:-75994211 None:intergenic
GAGCGAGCGGTGAAGAAGAG+TGG 0.563340 3_3:-75993960 None:intergenic
GAAGAAGAAGAATAAGGATG+GGG 0.563686 3_3:+75994781 Msa0473380:CDS
CGATCCTGTTACCAACCGCT+GGG 0.564306 3_3:+75994346 Msa0473380:CDS
GAGAGCGTGGGACCCGTGCA+AGG 0.565651 3_3:-75993884 None:intergenic
GGAGAGAGGTGGAGCGTGTG+CGG 0.565891 3_3:-75994022 None:intergenic
TTCCAGATCAGCAAATTGGT+CGG 0.568075 3_3:+75994316 Msa0473380:CDS
ATTGTAGGGGAAGGAAGAGG+AGG 0.569549 3_3:-75994086 None:intergenic
AGCCATAAACTGCCTTGCAC+GGG 0.572097 3_3:+75993872 Msa0473380:CDS
ATGGATTGGTTTGGAAACGA+GGG 0.575321 3_3:-75993922 None:intergenic
AGCGTGGGAGAGCGTTGGGA+GGG 0.581664 3_3:+75994487 Msa0473380:CDS
GAATTCACGCGCCACCCGCA+TGG 0.582008 3_3:-75994231 None:intergenic
CCCCGGTCCCTCCATGCGGG+TGG 0.583728 3_3:+75994220 Msa0473380:CDS
GGCTCCCCGGTCCCTCCATG+CGG 0.585977 3_3:+75994216 Msa0473380:CDS
CAGATCAGCAAATTGGTCGG+AGG 0.586808 3_3:+75994319 Msa0473380:CDS
GCAGCTGCTGGTGTTATCGA+CGG 0.586899 3_3:+75994254 Msa0473380:CDS
TGTTTGGGATCTTGATCCTG+CGG 0.588343 3_3:-75995826 None:intergenic
GAGCGTGGGAGAGCGTTGGG+AGG 0.588514 3_3:+75994486 Msa0473380:CDS
GAGGGTGAAGAATTGGAGAG+AGG 0.589538 3_3:-75994036 None:intergenic
GAGCTTGATTTAGGTTGGCG+CGG 0.591579 3_3:+75994509 Msa0473380:CDS
GGAGAGCAACTGTTGTGGAT+GGG 0.594745 3_3:+75994531 Msa0473380:CDS
CACCACAAAATCTACCTCAT+CGG 0.600911 3_3:+75994131 Msa0473380:CDS
TTGTAGGGGAAGGAAGAGGA+GGG 0.601044 3_3:-75994085 None:intergenic
AATAAGGATGGGGAATTGTG+GGG 0.601563 3_3:+75994791 Msa0473380:CDS
TTCACGCGCCACCCGCATGG+AGG 0.601818 3_3:-75994228 None:intergenic
TCTATCAAAACATGTCCCGC+AGG 0.606886 3_3:+75995810 Msa0473380:CDS
AAACGAGGGTGAGGGTTGTG+TGG 0.611470 3_3:-75993908 None:intergenic
GTGGTGGATGACAGCGTAAG+CGG 0.611973 3_3:-75994114 None:intergenic
CCACCCGCATGGAGGGACCG+GGG 0.612009 3_3:-75994220 None:intergenic
GTAGCCCCACACAGAAACCT+TGG 0.612328 3_3:-75994647 None:intergenic
GACGGGAAAATCTACGTCAT+CGG 0.619777 3_3:+75994272 Msa0473380:CDS
GCGGAGCCGATTGTAGGGGA+AGG 0.620894 3_3:-75994095 None:intergenic
TGATCCTTATAATGGAGCGT+GGG 0.625550 3_3:+75994472 Msa0473380:CDS
TTGATCCTTATAATGGAGCG+TGG 0.628287 3_3:+75994471 Msa0473380:CDS
AGGATCCATACATGACGAGA+TGG 0.628694 3_3:-75994173 None:intergenic
AGAAATTCTATGCAATCATG+AGG 0.632388 3_3:-75995849 None:intergenic
ATTTGAATGCAAATAAGAAG+GGG 0.632620 3_3:+75994720 Msa0473380:CDS
CACAAAATCTACCTCATCGG+TGG 0.633655 3_3:+75994134 Msa0473380:CDS
GGGAAAATCTACGTCATCGG+TGG 0.638696 3_3:+75994275 Msa0473380:CDS
GAGACGGTGGTTATTGTGGA+GGG 0.639572 3_3:-75994054 None:intergenic
GGAAGGGATGAGAGAGCGAG+CGG 0.643411 3_3:-75993973 None:intergenic
GCGCGGGAGAGCAACTGTTG+TGG 0.648340 3_3:+75994526 Msa0473380:CDS
TACGCGATGGCGGATCGCGG+TGG 0.651378 3_3:+75994440 Msa0473380:CDS
AACAGAAGAACAATGAACAA+TGG 0.652676 3_3:-75994861 None:intergenic
GTTTACGCGATGGCGGATCG+CGG 0.654239 3_3:+75994437 Msa0473380:CDS
ACAAATTGGACAAGATCTAG+TGG 0.655753 3_3:+75996133 Msa0473380:three_prime_UTR
AGACGGCAAAGTTTACGCGA+TGG 0.658808 3_3:+75994427 Msa0473380:CDS
GGGTTGTGTGGTGAGAGCGT+GGG 0.659765 3_3:-75993896 None:intergenic
CGGCAAAGTTTACGCGATGG+CGG 0.661397 3_3:+75994430 Msa0473380:CDS
GAGCATTATTCATACACCAG+TGG 0.672802 3_3:-75995921 None:intergenic
ATAGTTAAGCTTCAACTACG+TGG 0.679050 3_3:-75996105 None:intergenic
GAAATGGATGCACGCTAGCG+CGG 0.679178 3_3:+75994400 Msa0473380:CDS
AGTTTACCAAGGTTTCTGTG+TGG 0.681635 3_3:+75994641 Msa0473380:CDS
GTTTGGATAAGAGTTTACCA+AGG 0.687199 3_3:+75994630 Msa0473380:CDS
GACTAGGAACACTTTCCCAG+CGG 0.689950 3_3:-75994361 None:intergenic
CGTTGACTGAACCACCGATG+AGG 0.690906 3_3:-75994145 None:intergenic
GTAAGCGGAGCCGATTGTAG+GGG 0.695680 3_3:-75994099 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCTATTGAAGATAATTAT+TGG - chr3_3:75995691-75995710 None:intergenic 15.0%
!! AATCTATTGAAGATAATTAT+TGG - chr3_3:75995691-75995710 None:intergenic 15.0%
!! TTGTATTGCTATGATTATTT+AGG + chr3_3:75994557-75994576 Msa0473380:CDS 20.0%
!! TGTATTGCTATGATTATTTA+GGG + chr3_3:75994558-75994577 Msa0473380:CDS 20.0%
!! TGATTATTTAGGGAAAATTA+AGG + chr3_3:75994568-75994587 Msa0473380:CDS 20.0%
!! GATTATTTAGGGAAAATTAA+GGG + chr3_3:75994569-75994588 Msa0473380:CDS 20.0%
!! AATTTGAATGCAAATAAGAA+GGG + chr3_3:75994719-75994738 Msa0473380:CDS 20.0%
!! TTATTAATGAATCATGATCA+TGG - chr3_3:75995239-75995258 None:intergenic 20.0%
!!! CAATTTAAATTTTGAAGGAA+TGG - chr3_3:75995297-75995316 None:intergenic 20.0%
!!! CATTGCAATTTAAATTTTGA+AGG - chr3_3:75995302-75995321 None:intergenic 20.0%
!! CAAAATTTAAATTGCAATGT+TGG + chr3_3:75995303-75995322 Msa0473380:intron 20.0%
!! TTAACCAATATGTTATGAAA+TGG - chr3_3:75995332-75995351 None:intergenic 20.0%
!!! AAATTCTTTCTGTTTTTTTC+AGG + chr3_3:75995778-75995797 Msa0473380:intron 20.0%
!!! CAACTTTTTTTTATTACAGA+GGG - chr3_3:75995963-75995982 None:intergenic 20.0%
!! TTGTATTGCTATGATTATTT+AGG + chr3_3:75994557-75994576 Msa0473380:CDS 20.0%
!! TGTATTGCTATGATTATTTA+GGG + chr3_3:75994558-75994577 Msa0473380:CDS 20.0%
!! TGATTATTTAGGGAAAATTA+AGG + chr3_3:75994568-75994587 Msa0473380:CDS 20.0%
!! GATTATTTAGGGAAAATTAA+GGG + chr3_3:75994569-75994588 Msa0473380:CDS 20.0%
!! AATTTGAATGCAAATAAGAA+GGG + chr3_3:75994719-75994738 Msa0473380:CDS 20.0%
!! TTATTAATGAATCATGATCA+TGG - chr3_3:75995239-75995258 None:intergenic 20.0%
!!! CAATTTAAATTTTGAAGGAA+TGG - chr3_3:75995297-75995316 None:intergenic 20.0%
!!! CATTGCAATTTAAATTTTGA+AGG - chr3_3:75995302-75995321 None:intergenic 20.0%
!! CAAAATTTAAATTGCAATGT+TGG + chr3_3:75995303-75995322 Msa0473380:intron 20.0%
!! TTAACCAATATGTTATGAAA+TGG - chr3_3:75995332-75995351 None:intergenic 20.0%
!!! AAATTCTTTCTGTTTTTTTC+AGG + chr3_3:75995778-75995797 Msa0473380:intron 20.0%
!!! CAACTTTTTTTTATTACAGA+GGG - chr3_3:75995963-75995982 None:intergenic 20.0%
!!! GTTTTGTTTGATCCTTATAA+TGG + chr3_3:75994464-75994483 Msa0473380:CDS 25.0%
! GAATTTGAATGCAAATAAGA+AGG + chr3_3:75994718-75994737 Msa0473380:CDS 25.0%
! ATTTGAATGCAAATAAGAAG+GGG + chr3_3:75994720-75994739 Msa0473380:CDS 25.0%
!! CATTTTATAGAAAGAAACTG+CGG - chr3_3:75994997-75995016 None:intergenic 25.0%
! CTATGATGATCTTATAACAA+GGG - chr3_3:75995033-75995052 None:intergenic 25.0%
! AGAACACAACAAAAATCAAA+AGG - chr3_3:75995754-75995773 None:intergenic 25.0%
!!! TTTTGATTTTTGTTGTGTTC+TGG + chr3_3:75995753-75995772 Msa0473380:intron 25.0%
!!! GCAACTTTTTTTTATTACAG+AGG - chr3_3:75995964-75995983 None:intergenic 25.0%
! TATGATTTATGACACATCTA+TGG - chr3_3:75996043-75996062 None:intergenic 25.0%
! TGATAGAAAACGCAAATAAA+GGG - chr3_3:75996068-75996087 None:intergenic 25.0%
! ATGATAGAAAACGCAAATAA+AGG - chr3_3:75996069-75996088 None:intergenic 25.0%
! ATTATGACTATCAAAATTGC+TGG + chr3_3:75996173-75996192 Msa0473380:three_prime_UTR 25.0%
! TATAACTGCTATCAAATTGT+TGG + chr3_3:75996213-75996232 Msa0473380:three_prime_UTR 25.0%
!!! GTTTTGTTTGATCCTTATAA+TGG + chr3_3:75994464-75994483 Msa0473380:CDS 25.0%
! GAATTTGAATGCAAATAAGA+AGG + chr3_3:75994718-75994737 Msa0473380:CDS 25.0%
! ATTTGAATGCAAATAAGAAG+GGG + chr3_3:75994720-75994739 Msa0473380:CDS 25.0%
!! CATTTTATAGAAAGAAACTG+CGG - chr3_3:75994997-75995016 None:intergenic 25.0%
! CTATGATGATCTTATAACAA+GGG - chr3_3:75995033-75995052 None:intergenic 25.0%
! AGAACACAACAAAAATCAAA+AGG - chr3_3:75995754-75995773 None:intergenic 25.0%
!!! TTTTGATTTTTGTTGTGTTC+TGG + chr3_3:75995753-75995772 Msa0473380:intron 25.0%
!!! GCAACTTTTTTTTATTACAG+AGG - chr3_3:75995964-75995983 None:intergenic 25.0%
! TATGATTTATGACACATCTA+TGG - chr3_3:75996043-75996062 None:intergenic 25.0%
! TGATAGAAAACGCAAATAAA+GGG - chr3_3:75996068-75996087 None:intergenic 25.0%
! ATGATAGAAAACGCAAATAA+AGG - chr3_3:75996069-75996088 None:intergenic 25.0%
! ATTATGACTATCAAAATTGC+TGG + chr3_3:75996173-75996192 Msa0473380:three_prime_UTR 25.0%
! TATAACTGCTATCAAATTGT+TGG + chr3_3:75996213-75996232 Msa0473380:three_prime_UTR 25.0%
! ATTTTTCCAGATCAGCAAAT+TGG + chr3_3:75994312-75994331 Msa0473380:CDS 30.0%
AAATAAGAAGGGGAAAGAAA+TGG + chr3_3:75994730-75994749 Msa0473380:CDS 30.0%
TGTGAAGAAGAAGAAGAATA+AGG + chr3_3:75994775-75994794 Msa0473380:CDS 30.0%
AAGAAGAAGAAGAATAAGGA+TGG + chr3_3:75994779-75994798 Msa0473380:CDS 30.0%
AGAAGAAGAAGAATAAGGAT+GGG + chr3_3:75994780-75994799 Msa0473380:CDS 30.0%
AATGTTCTTTCTGTTCCTAA+AGG + chr3_3:75994833-75994852 Msa0473380:CDS 30.0%
AACAGAAGAACAATGAACAA+TGG - chr3_3:75994864-75994883 None:intergenic 30.0%
TTCTTCTGTTGCATTATGAT+TGG + chr3_3:75994874-75994893 Msa0473380:intron 30.0%
TGTTGCATTATGATTGGATT+TGG + chr3_3:75994880-75994899 Msa0473380:intron 30.0%
GTTGCATTATGATTGGATTT+GGG + chr3_3:75994881-75994900 Msa0473380:intron 30.0%
!! CTTGTTTTCTTTCCTCATTA+TGG + chr3_3:75994943-75994962 Msa0473380:intron 30.0%
TTCTTTCCTCATTATGGAAT+AGG + chr3_3:75994949-75994968 Msa0473380:intron 30.0%
TCATTATGGAATAGGTCAAT+GGG + chr3_3:75994957-75994976 Msa0473380:intron 30.0%
ATAACAAGGGACAAACATAA+AGG - chr3_3:75995020-75995039 None:intergenic 30.0%
CCTATGATGATCTTATAACA+AGG - chr3_3:75995034-75995053 None:intergenic 30.0%
! CCTTGTTATAAGATCATCAT+AGG + chr3_3:75995031-75995050 Msa0473380:intron 30.0%
GTTATATGATCAGTTGCTTA+AGG - chr3_3:75995119-75995138 None:intergenic 30.0%
GTCACCATTTCATAACATAT+TGG + chr3_3:75995325-75995344 Msa0473380:intron 30.0%
!! TTTCATAGTAGCCTTAGTTT+TGG + chr3_3:75995463-75995482 Msa0473380:intron 30.0%
!! TTCATAGTAGCCTTAGTTTT+GGG + chr3_3:75995464-75995483 Msa0473380:intron 30.0%
!!! TCCTCTCAATTTTTTTCAAG+TGG + chr3_3:75995507-75995526 Msa0473380:intron 30.0%
TCCACTTGAAAAAAATTGAG+AGG - chr3_3:75995511-75995530 None:intergenic 30.0%
! CTTTTCTTTCTCATGTTTGA+TGG - chr3_3:75995541-75995560 None:intergenic 30.0%
TCAAACATGAGAAAGAAAAG+TGG + chr3_3:75995541-75995560 Msa0473380:intron 30.0%
!!! TGGATTGTGTGTTTTAATGA+GGG + chr3_3:75995561-75995580 Msa0473380:intron 30.0%
! AATTCACAAAACAACGGATT+TGG - chr3_3:75995633-75995652 None:intergenic 30.0%
!! AAATCCGTTGTTTTGTGAAT+TGG + chr3_3:75995632-75995651 Msa0473380:intron 30.0%
!! AATCCGTTGTTTTGTGAATT+GGG + chr3_3:75995633-75995652 Msa0473380:intron 30.0%
AAACCCAATTCACAAAACAA+CGG - chr3_3:75995639-75995658 None:intergenic 30.0%
!!! TTTTTTTATCTCCTTCTCGT+AGG + chr3_3:75995723-75995742 Msa0473380:intron 30.0%
AGAAATTCTATGCAATCATG+AGG - chr3_3:75995852-75995871 None:intergenic 30.0%
TATGAATAATGCTCAAGTAC+TGG + chr3_3:75995930-75995949 Msa0473380:three_prime_UTR 30.0%
ATGAATAATGCTCAAGTACT+GGG + chr3_3:75995931-75995950 Msa0473380:three_prime_UTR 30.0%
CTTAACTATTTCGCACAAAT+TGG + chr3_3:75996119-75996138 Msa0473380:three_prime_UTR 30.0%
! ATCAAAATTGCTGGTTGTAA+TGG + chr3_3:75996182-75996201 Msa0473380:three_prime_UTR 30.0%
! ATTTTTCCAGATCAGCAAAT+TGG + chr3_3:75994312-75994331 Msa0473380:CDS 30.0%
AAATAAGAAGGGGAAAGAAA+TGG + chr3_3:75994730-75994749 Msa0473380:CDS 30.0%
TGTGAAGAAGAAGAAGAATA+AGG + chr3_3:75994775-75994794 Msa0473380:CDS 30.0%
AAGAAGAAGAAGAATAAGGA+TGG + chr3_3:75994779-75994798 Msa0473380:CDS 30.0%
AGAAGAAGAAGAATAAGGAT+GGG + chr3_3:75994780-75994799 Msa0473380:CDS 30.0%
AATGTTCTTTCTGTTCCTAA+AGG + chr3_3:75994833-75994852 Msa0473380:CDS 30.0%
AACAGAAGAACAATGAACAA+TGG - chr3_3:75994864-75994883 None:intergenic 30.0%
TTCTTCTGTTGCATTATGAT+TGG + chr3_3:75994874-75994893 Msa0473380:intron 30.0%
TGTTGCATTATGATTGGATT+TGG + chr3_3:75994880-75994899 Msa0473380:intron 30.0%
GTTGCATTATGATTGGATTT+GGG + chr3_3:75994881-75994900 Msa0473380:intron 30.0%
!! CTTGTTTTCTTTCCTCATTA+TGG + chr3_3:75994943-75994962 Msa0473380:intron 30.0%
TTCTTTCCTCATTATGGAAT+AGG + chr3_3:75994949-75994968 Msa0473380:intron 30.0%
TCATTATGGAATAGGTCAAT+GGG + chr3_3:75994957-75994976 Msa0473380:intron 30.0%
ATAACAAGGGACAAACATAA+AGG - chr3_3:75995020-75995039 None:intergenic 30.0%
CCTATGATGATCTTATAACA+AGG - chr3_3:75995034-75995053 None:intergenic 30.0%
! CCTTGTTATAAGATCATCAT+AGG + chr3_3:75995031-75995050 Msa0473380:intron 30.0%
GTTATATGATCAGTTGCTTA+AGG - chr3_3:75995119-75995138 None:intergenic 30.0%
GTCACCATTTCATAACATAT+TGG + chr3_3:75995325-75995344 Msa0473380:intron 30.0%
!! TTTCATAGTAGCCTTAGTTT+TGG + chr3_3:75995463-75995482 Msa0473380:intron 30.0%
!! TTCATAGTAGCCTTAGTTTT+GGG + chr3_3:75995464-75995483 Msa0473380:intron 30.0%
!!! TCCTCTCAATTTTTTTCAAG+TGG + chr3_3:75995507-75995526 Msa0473380:intron 30.0%
TCCACTTGAAAAAAATTGAG+AGG - chr3_3:75995511-75995530 None:intergenic 30.0%
! CTTTTCTTTCTCATGTTTGA+TGG - chr3_3:75995541-75995560 None:intergenic 30.0%
TCAAACATGAGAAAGAAAAG+TGG + chr3_3:75995541-75995560 Msa0473380:intron 30.0%
!!! TGGATTGTGTGTTTTAATGA+GGG + chr3_3:75995561-75995580 Msa0473380:intron 30.0%
! AATTCACAAAACAACGGATT+TGG - chr3_3:75995633-75995652 None:intergenic 30.0%
!! AAATCCGTTGTTTTGTGAAT+TGG + chr3_3:75995632-75995651 Msa0473380:intron 30.0%
!! AATCCGTTGTTTTGTGAATT+GGG + chr3_3:75995633-75995652 Msa0473380:intron 30.0%
AAACCCAATTCACAAAACAA+CGG - chr3_3:75995639-75995658 None:intergenic 30.0%
!!! TTTTTTTATCTCCTTCTCGT+AGG + chr3_3:75995723-75995742 Msa0473380:intron 30.0%
AGAAATTCTATGCAATCATG+AGG - chr3_3:75995852-75995871 None:intergenic 30.0%
TATGAATAATGCTCAAGTAC+TGG + chr3_3:75995930-75995949 Msa0473380:three_prime_UTR 30.0%
ATGAATAATGCTCAAGTACT+GGG + chr3_3:75995931-75995950 Msa0473380:three_prime_UTR 30.0%
CTTAACTATTTCGCACAAAT+TGG + chr3_3:75996119-75996138 Msa0473380:three_prime_UTR 30.0%
! ATCAAAATTGCTGGTTGTAA+TGG + chr3_3:75996182-75996201 Msa0473380:three_prime_UTR 30.0%
GCTGATCTGGAAAAATTATC+CGG - chr3_3:75994308-75994327 None:intergenic 35.0%
ATCCATTTCTCACGAATTTC+TGG - chr3_3:75994389-75994408 None:intergenic 35.0%
!! AAGGGTTTTGATGTGAAGAA+AGG + chr3_3:75994587-75994606 Msa0473380:intron 35.0%
!! AGGGTTTTGATGTGAAGAAA+GGG + chr3_3:75994588-75994607 Msa0473380:intron 35.0%
GTTTGGATAAGAGTTTACCA+AGG + chr3_3:75994630-75994649 Msa0473380:CDS 35.0%
GAAGAAGAAGAATAAGGATG+GGG + chr3_3:75994781-75994800 Msa0473380:CDS 35.0%
TGAACAATGGAAGATCCTTT+AGG - chr3_3:75994851-75994870 None:intergenic 35.0%
CATTGACCTATTCCATAATG+AGG - chr3_3:75994958-75994977 None:intergenic 35.0%
CTCATTATGGAATAGGTCAA+TGG + chr3_3:75994956-75994975 Msa0473380:intron 35.0%
TTTATAGAAAGAAACTGCGG+AGG - chr3_3:75994994-75995013 None:intergenic 35.0%
! ATCAGATCAGTTTTCTGTCA+TGG + chr3_3:75995179-75995198 Msa0473380:intron 35.0%
! GGTTTTGCAGGATAAATACT+TGG + chr3_3:75995200-75995219 Msa0473380:intron 35.0%
AATGACTAGCATGGAAATGA+TGG + chr3_3:75995421-75995440 Msa0473380:intron 35.0%
! AAATGATGGAACTCAGCTAT+AGG + chr3_3:75995435-75995454 Msa0473380:intron 35.0%
CGATTCAAATCCCAAAACTA+AGG - chr3_3:75995477-75995496 None:intergenic 35.0%
! TTTGGGATTTGAATCGTCAT+TGG + chr3_3:75995481-75995500 Msa0473380:intron 35.0%
!!! GTGGATTGTGTGTTTTAATG+AGG + chr3_3:75995560-75995579 Msa0473380:intron 35.0%
! TGATTGTCATAGAGCTTTTG+AGG + chr3_3:75995665-75995684 Msa0473380:intron 35.0%
!!! GGACATGTTTTGATAGAAAC+AGG - chr3_3:75995807-75995826 None:intergenic 35.0%
! TATGCAATCATGAGGTGTTT+GGG - chr3_3:75995844-75995863 None:intergenic 35.0%
GATTGCATAGAATTTCTGCT+TGG + chr3_3:75995855-75995874 Msa0473380:exon 35.0%
ATAGTTAAGCTTCAACTACG+TGG - chr3_3:75996108-75996127 None:intergenic 35.0%
ACAAATTGGACAAGATCTAG+TGG + chr3_3:75996133-75996152 Msa0473380:three_prime_UTR 35.0%
TTGGTGTGTATGTATTCAGT+TGG + chr3_3:75996232-75996251 Msa0473380:three_prime_UTR 35.0%
GCTGATCTGGAAAAATTATC+CGG - chr3_3:75994308-75994327 None:intergenic 35.0%
ATCCATTTCTCACGAATTTC+TGG - chr3_3:75994389-75994408 None:intergenic 35.0%
!! AAGGGTTTTGATGTGAAGAA+AGG + chr3_3:75994587-75994606 Msa0473380:intron 35.0%
!! AGGGTTTTGATGTGAAGAAA+GGG + chr3_3:75994588-75994607 Msa0473380:intron 35.0%
GTTTGGATAAGAGTTTACCA+AGG + chr3_3:75994630-75994649 Msa0473380:CDS 35.0%
GAAGAAGAAGAATAAGGATG+GGG + chr3_3:75994781-75994800 Msa0473380:CDS 35.0%
TGAACAATGGAAGATCCTTT+AGG - chr3_3:75994851-75994870 None:intergenic 35.0%
CATTGACCTATTCCATAATG+AGG - chr3_3:75994958-75994977 None:intergenic 35.0%
CTCATTATGGAATAGGTCAA+TGG + chr3_3:75994956-75994975 Msa0473380:intron 35.0%
TTTATAGAAAGAAACTGCGG+AGG - chr3_3:75994994-75995013 None:intergenic 35.0%
! ATCAGATCAGTTTTCTGTCA+TGG + chr3_3:75995179-75995198 Msa0473380:intron 35.0%
! GGTTTTGCAGGATAAATACT+TGG + chr3_3:75995200-75995219 Msa0473380:intron 35.0%
AATGACTAGCATGGAAATGA+TGG + chr3_3:75995421-75995440 Msa0473380:intron 35.0%
! AAATGATGGAACTCAGCTAT+AGG + chr3_3:75995435-75995454 Msa0473380:intron 35.0%
CGATTCAAATCCCAAAACTA+AGG - chr3_3:75995477-75995496 None:intergenic 35.0%
! TTTGGGATTTGAATCGTCAT+TGG + chr3_3:75995481-75995500 Msa0473380:intron 35.0%
!!! GTGGATTGTGTGTTTTAATG+AGG + chr3_3:75995560-75995579 Msa0473380:intron 35.0%
! TGATTGTCATAGAGCTTTTG+AGG + chr3_3:75995665-75995684 Msa0473380:intron 35.0%
!!! GGACATGTTTTGATAGAAAC+AGG - chr3_3:75995807-75995826 None:intergenic 35.0%
! TATGCAATCATGAGGTGTTT+GGG - chr3_3:75995844-75995863 None:intergenic 35.0%
GATTGCATAGAATTTCTGCT+TGG + chr3_3:75995855-75995874 Msa0473380:exon 35.0%
ATAGTTAAGCTTCAACTACG+TGG - chr3_3:75996108-75996127 None:intergenic 35.0%
ACAAATTGGACAAGATCTAG+TGG + chr3_3:75996133-75996152 Msa0473380:three_prime_UTR 35.0%
TTGGTGTGTATGTATTCAGT+TGG + chr3_3:75996232-75996251 Msa0473380:three_prime_UTR 35.0%
!! ATGGATTGGTTTGGAAACGA+GGG - chr3_3:75993925-75993944 None:intergenic 40.0%
!! AATGGATTGGTTTGGAAACG+AGG - chr3_3:75993926-75993945 None:intergenic 40.0%
TATTGTGGAGGGTGAAGAAT+TGG - chr3_3:75994046-75994065 None:intergenic 40.0%
CACCACAAAATCTACCTCAT+CGG + chr3_3:75994131-75994150 Msa0473380:CDS 40.0%
ATGTACCATCTCGTCATGTA+TGG + chr3_3:75994168-75994187 Msa0473380:CDS 40.0%
TTCCAGATCAGCAAATTGGT+CGG + chr3_3:75994316-75994335 Msa0473380:CDS 40.0%
! CATTTCTCACGAATTTCTGG+TGG - chr3_3:75994386-75994405 None:intergenic 40.0%
CACCAGAAATTCGTGAGAAA+TGG + chr3_3:75994384-75994403 Msa0473380:CDS 40.0%
! TTGATCCTTATAATGGAGCG+TGG + chr3_3:75994471-75994490 Msa0473380:CDS 40.0%
! TGATCCTTATAATGGAGCGT+GGG + chr3_3:75994472-75994491 Msa0473380:CDS 40.0%
TTGATGTGAAGAAAGGGTTG+TGG + chr3_3:75994594-75994613 Msa0473380:intron 40.0%
AGTTTACCAAGGTTTCTGTG+TGG + chr3_3:75994641-75994660 Msa0473380:CDS 40.0%
GTTTACCAAGGTTTCTGTGT+GGG + chr3_3:75994642-75994661 Msa0473380:CDS 40.0%
TTTACCAAGGTTTCTGTGTG+GGG + chr3_3:75994643-75994662 Msa0473380:CDS 40.0%
TGGGAAATTGGTTGTGGTTT+GGG + chr3_3:75994685-75994704 Msa0473380:CDS 40.0%
AGGGGAAAGAAATGGAGATT+TGG + chr3_3:75994738-75994757 Msa0473380:CDS 40.0%
AGAATAAGGATGGGGAATTG+TGG + chr3_3:75994789-75994808 Msa0473380:CDS 40.0%
GAATAAGGATGGGGAATTGT+GGG + chr3_3:75994790-75994809 Msa0473380:CDS 40.0%
AATAAGGATGGGGAATTGTG+GGG + chr3_3:75994791-75994810 Msa0473380:CDS 40.0%
AATTGTGGGGTGAAGTTTGT+TGG + chr3_3:75994804-75994823 Msa0473380:CDS 40.0%
AAGACACGCAATGTGAAAGA+TGG - chr3_3:75994908-75994927 None:intergenic 40.0%
TTCACATTGCGTGTCTTGTA+AGG + chr3_3:75994911-75994930 Msa0473380:intron 40.0%
ATGGAATAGGTCAATGGGAT+AGG + chr3_3:75994962-75994981 Msa0473380:intron 40.0%
!! GTTTTCTGTCATGGTTTTGC+AGG + chr3_3:75995188-75995207 Msa0473380:intron 40.0%
TCGTTAGAACTTGAACTAGC+TGG - chr3_3:75995399-75995418 None:intergenic 40.0%
CTAACGATGAATGACTAGCA+TGG + chr3_3:75995412-75995431 Msa0473380:intron 40.0%
! CTATGCAATCATGAGGTGTT+TGG - chr3_3:75995845-75995864 None:intergenic 40.0%
GAGCATTATTCATACACCAG+TGG - chr3_3:75995924-75995943 None:intergenic 40.0%
CTTCAACTACGTGGAACTTA+AGG - chr3_3:75996099-75996118 None:intergenic 40.0%
!! ATGGATTGGTTTGGAAACGA+GGG - chr3_3:75993925-75993944 None:intergenic 40.0%
!! AATGGATTGGTTTGGAAACG+AGG - chr3_3:75993926-75993945 None:intergenic 40.0%
TATTGTGGAGGGTGAAGAAT+TGG - chr3_3:75994046-75994065 None:intergenic 40.0%
CACCACAAAATCTACCTCAT+CGG + chr3_3:75994131-75994150 Msa0473380:CDS 40.0%
ATGTACCATCTCGTCATGTA+TGG + chr3_3:75994168-75994187 Msa0473380:CDS 40.0%
TTCCAGATCAGCAAATTGGT+CGG + chr3_3:75994316-75994335 Msa0473380:CDS 40.0%
! CATTTCTCACGAATTTCTGG+TGG - chr3_3:75994386-75994405 None:intergenic 40.0%
CACCAGAAATTCGTGAGAAA+TGG + chr3_3:75994384-75994403 Msa0473380:CDS 40.0%
! TTGATCCTTATAATGGAGCG+TGG + chr3_3:75994471-75994490 Msa0473380:CDS 40.0%
! TGATCCTTATAATGGAGCGT+GGG + chr3_3:75994472-75994491 Msa0473380:CDS 40.0%
TTGATGTGAAGAAAGGGTTG+TGG + chr3_3:75994594-75994613 Msa0473380:intron 40.0%
AGTTTACCAAGGTTTCTGTG+TGG + chr3_3:75994641-75994660 Msa0473380:CDS 40.0%
GTTTACCAAGGTTTCTGTGT+GGG + chr3_3:75994642-75994661 Msa0473380:CDS 40.0%
TTTACCAAGGTTTCTGTGTG+GGG + chr3_3:75994643-75994662 Msa0473380:CDS 40.0%
TGGGAAATTGGTTGTGGTTT+GGG + chr3_3:75994685-75994704 Msa0473380:CDS 40.0%
AGGGGAAAGAAATGGAGATT+TGG + chr3_3:75994738-75994757 Msa0473380:CDS 40.0%
AGAATAAGGATGGGGAATTG+TGG + chr3_3:75994789-75994808 Msa0473380:CDS 40.0%
GAATAAGGATGGGGAATTGT+GGG + chr3_3:75994790-75994809 Msa0473380:CDS 40.0%
AATAAGGATGGGGAATTGTG+GGG + chr3_3:75994791-75994810 Msa0473380:CDS 40.0%
AATTGTGGGGTGAAGTTTGT+TGG + chr3_3:75994804-75994823 Msa0473380:CDS 40.0%
AAGACACGCAATGTGAAAGA+TGG - chr3_3:75994908-75994927 None:intergenic 40.0%
TTCACATTGCGTGTCTTGTA+AGG + chr3_3:75994911-75994930 Msa0473380:intron 40.0%
ATGGAATAGGTCAATGGGAT+AGG + chr3_3:75994962-75994981 Msa0473380:intron 40.0%
!! GTTTTCTGTCATGGTTTTGC+AGG + chr3_3:75995188-75995207 Msa0473380:intron 40.0%
TCGTTAGAACTTGAACTAGC+TGG - chr3_3:75995399-75995418 None:intergenic 40.0%
CTAACGATGAATGACTAGCA+TGG + chr3_3:75995412-75995431 Msa0473380:intron 40.0%
! CTATGCAATCATGAGGTGTT+TGG - chr3_3:75995845-75995864 None:intergenic 40.0%
GAGCATTATTCATACACCAG+TGG - chr3_3:75995924-75995943 None:intergenic 40.0%
CTTCAACTACGTGGAACTTA+AGG - chr3_3:75996099-75996118 None:intergenic 40.0%
TAGCCATAAACTGCCTTGCA+CGG + chr3_3:75993871-75993890 Msa0473380:CDS 45.0%
!! GAGGAGAGAATGGATTGGTT+TGG - chr3_3:75993934-75993953 None:intergenic 45.0%
GAAGAGAGGAGAGAATGGAT+TGG - chr3_3:75993939-75993958 None:intergenic 45.0%
TGAAGAAGAGTGGAGAAGAG+AGG - chr3_3:75993953-75993972 None:intergenic 45.0%
AGAGAGGTAGAGGATGTGTT+GGG - chr3_3:75994000-75994019 None:intergenic 45.0%
! CGATGAGGTAGATTTTGTGG+TGG - chr3_3:75994133-75994152 None:intergenic 45.0%
! CACCGATGAGGTAGATTTTG+TGG - chr3_3:75994136-75994155 None:intergenic 45.0%
CACAAAATCTACCTCATCGG+TGG + chr3_3:75994134-75994153 Msa0473380:CDS 45.0%
AGGATCCATACATGACGAGA+TGG - chr3_3:75994176-75994195 None:intergenic 45.0%
GACGGGAAAATCTACGTCAT+CGG + chr3_3:75994272-75994291 Msa0473380:CDS 45.0%
!! TCACGAATTTCTGGTGGACT+AGG - chr3_3:75994380-75994399 None:intergenic 45.0%
TGTGAAGAAAGGGTTGTGGA+AGG + chr3_3:75994598-75994617 Msa0473380:intron 45.0%
GTGGAAGGAGTTGAAAGGTT+TGG + chr3_3:75994613-75994632 Msa0473380:intron 45.0%
CTACAATGGCTGATGTTGGT+GGG + chr3_3:75994666-75994685 Msa0473380:CDS 45.0%
! TGTTGGTGGGAAATTGGTTG+TGG + chr3_3:75994679-75994698 Msa0473380:CDS 45.0%
GTGGGAAATTGGTTGTGGTT+TGG + chr3_3:75994684-75994703 Msa0473380:CDS 45.0%
!! TTGTGGTTTGGGAGTGTCAA+AGG + chr3_3:75994696-75994715 Msa0473380:CDS 45.0%
!! AAAAGGCATTGCCTACGAGA+AGG - chr3_3:75995737-75995756 None:intergenic 45.0%
TCTATCAAAACATGTCCCGC+AGG + chr3_3:75995810-75995829 Msa0473380:CDS 45.0%
! TGTTTGGGATCTTGATCCTG+CGG - chr3_3:75995829-75995848 None:intergenic 45.0%
!! CGTGTCATTTATTGCTCCAC+TGG + chr3_3:75995905-75995924 Msa0473380:three_prime_UTR 45.0%
!! AATGCTCAAGTACTGGGCTT+CGG + chr3_3:75995937-75995956 Msa0473380:three_prime_UTR 45.0%
TAGCCATAAACTGCCTTGCA+CGG + chr3_3:75993871-75993890 Msa0473380:CDS 45.0%
!! GAGGAGAGAATGGATTGGTT+TGG - chr3_3:75993934-75993953 None:intergenic 45.0%
GAAGAGAGGAGAGAATGGAT+TGG - chr3_3:75993939-75993958 None:intergenic 45.0%
TGAAGAAGAGTGGAGAAGAG+AGG - chr3_3:75993953-75993972 None:intergenic 45.0%
AGAGAGGTAGAGGATGTGTT+GGG - chr3_3:75994000-75994019 None:intergenic 45.0%
! CGATGAGGTAGATTTTGTGG+TGG - chr3_3:75994133-75994152 None:intergenic 45.0%
! CACCGATGAGGTAGATTTTG+TGG - chr3_3:75994136-75994155 None:intergenic 45.0%
CACAAAATCTACCTCATCGG+TGG + chr3_3:75994134-75994153 Msa0473380:CDS 45.0%
AGGATCCATACATGACGAGA+TGG - chr3_3:75994176-75994195 None:intergenic 45.0%
GACGGGAAAATCTACGTCAT+CGG + chr3_3:75994272-75994291 Msa0473380:CDS 45.0%
!! TCACGAATTTCTGGTGGACT+AGG - chr3_3:75994380-75994399 None:intergenic 45.0%
TGTGAAGAAAGGGTTGTGGA+AGG + chr3_3:75994598-75994617 Msa0473380:intron 45.0%
GTGGAAGGAGTTGAAAGGTT+TGG + chr3_3:75994613-75994632 Msa0473380:intron 45.0%
CTACAATGGCTGATGTTGGT+GGG + chr3_3:75994666-75994685 Msa0473380:CDS 45.0%
! TGTTGGTGGGAAATTGGTTG+TGG + chr3_3:75994679-75994698 Msa0473380:CDS 45.0%
GTGGGAAATTGGTTGTGGTT+TGG + chr3_3:75994684-75994703 Msa0473380:CDS 45.0%
!! TTGTGGTTTGGGAGTGTCAA+AGG + chr3_3:75994696-75994715 Msa0473380:CDS 45.0%
!! AAAAGGCATTGCCTACGAGA+AGG - chr3_3:75995737-75995756 None:intergenic 45.0%
TCTATCAAAACATGTCCCGC+AGG + chr3_3:75995810-75995829 Msa0473380:CDS 45.0%
! TGTTTGGGATCTTGATCCTG+CGG - chr3_3:75995829-75995848 None:intergenic 45.0%
!! CGTGTCATTTATTGCTCCAC+TGG + chr3_3:75995905-75995924 Msa0473380:three_prime_UTR 45.0%
!! AATGCTCAAGTACTGGGCTT+CGG + chr3_3:75995937-75995956 Msa0473380:three_prime_UTR 45.0%
AGCCATAAACTGCCTTGCAC+GGG + chr3_3:75993872-75993891 Msa0473380:CDS 50.0%
! TGGTTTGGAAACGAGGGTGA+GGG - chr3_3:75993919-75993938 None:intergenic 50.0%
!! TTGGTTTGGAAACGAGGGTG+AGG - chr3_3:75993920-75993939 None:intergenic 50.0%
GTGGAGAAGAGAGGAGAGAA+TGG - chr3_3:75993944-75993963 None:intergenic 50.0%
AGAGGATGTGTTGGGTGGAA+GGG - chr3_3:75993992-75994011 None:intergenic 50.0%
TAGAGGATGTGTTGGGTGGA+AGG - chr3_3:75993993-75994012 None:intergenic 50.0%
GAGAGAGGTAGAGGATGTGT+TGG - chr3_3:75994001-75994020 None:intergenic 50.0%
GGTGAAGAATTGGAGAGAGG+TGG - chr3_3:75994036-75994055 None:intergenic 50.0%
GAGGGTGAAGAATTGGAGAG+AGG - chr3_3:75994039-75994058 None:intergenic 50.0%
GAGACGGTGGTTATTGTGGA+GGG - chr3_3:75994057-75994076 None:intergenic 50.0%
TTGTAGGGGAAGGAAGAGGA+GGG - chr3_3:75994088-75994107 None:intergenic 50.0%
ATTGTAGGGGAAGGAAGAGG+AGG - chr3_3:75994089-75994108 None:intergenic 50.0%
CCTCTTCCTTCCCCTACAAT+CGG + chr3_3:75994089-75994108 Msa0473380:CDS 50.0%
GGGAAAATCTACGTCATCGG+TGG + chr3_3:75994275-75994294 Msa0473380:CDS 50.0%
!! CTCCGACCAATTTGCTGATC+TGG - chr3_3:75994321-75994340 None:intergenic 50.0%
CAGATCAGCAAATTGGTCGG+AGG + chr3_3:75994319-75994338 Msa0473380:CDS 50.0%
GACTAGGAACACTTTCCCAG+CGG - chr3_3:75994364-75994383 None:intergenic 50.0%
AGACGGCAAAGTTTACGCGA+TGG + chr3_3:75994427-75994446 Msa0473380:CDS 50.0%
CTCTCCCACGCTCCATTATA+AGG - chr3_3:75994479-75994498 None:intergenic 50.0%
GTTGGGAGGGAGCTTGATTT+AGG + chr3_3:75994500-75994519 Msa0473380:CDS 50.0%
GGAGGGAGCTTGATTTAGGT+TGG + chr3_3:75994504-75994523 Msa0473380:CDS 50.0%
!! GAGCTTGATTTAGGTTGGCG+CGG + chr3_3:75994509-75994528 Msa0473380:CDS 50.0%
!! AGCTTGATTTAGGTTGGCGC+GGG + chr3_3:75994510-75994529 Msa0473380:CDS 50.0%
GGAGAGCAACTGTTGTGGAT+GGG + chr3_3:75994531-75994550 Msa0473380:CDS 50.0%
GGGTTGTGGAAGGAGTTGAA+AGG + chr3_3:75994608-75994627 Msa0473380:intron 50.0%
GTTTCTGTGTGGGGCTACAA+TGG + chr3_3:75994652-75994671 Msa0473380:CDS 50.0%
GCTACAATGGCTGATGTTGG+TGG + chr3_3:75994665-75994684 Msa0473380:CDS 50.0%
! GGCTGATGTTGGTGGGAAAT+TGG + chr3_3:75994673-75994692 Msa0473380:CDS 50.0%
! GTTTGGGATCTTGATCCTGC+GGG - chr3_3:75995828-75995847 None:intergenic 50.0%
AGCCATAAACTGCCTTGCAC+GGG + chr3_3:75993872-75993891 Msa0473380:CDS 50.0%
! TGGTTTGGAAACGAGGGTGA+GGG - chr3_3:75993919-75993938 None:intergenic 50.0%
!! TTGGTTTGGAAACGAGGGTG+AGG - chr3_3:75993920-75993939 None:intergenic 50.0%
GTGGAGAAGAGAGGAGAGAA+TGG - chr3_3:75993944-75993963 None:intergenic 50.0%
AGAGGATGTGTTGGGTGGAA+GGG - chr3_3:75993992-75994011 None:intergenic 50.0%
TAGAGGATGTGTTGGGTGGA+AGG - chr3_3:75993993-75994012 None:intergenic 50.0%
GAGAGAGGTAGAGGATGTGT+TGG - chr3_3:75994001-75994020 None:intergenic 50.0%
GGTGAAGAATTGGAGAGAGG+TGG - chr3_3:75994036-75994055 None:intergenic 50.0%
GAGGGTGAAGAATTGGAGAG+AGG - chr3_3:75994039-75994058 None:intergenic 50.0%
GAGACGGTGGTTATTGTGGA+GGG - chr3_3:75994057-75994076 None:intergenic 50.0%
TTGTAGGGGAAGGAAGAGGA+GGG - chr3_3:75994088-75994107 None:intergenic 50.0%
ATTGTAGGGGAAGGAAGAGG+AGG - chr3_3:75994089-75994108 None:intergenic 50.0%
CCTCTTCCTTCCCCTACAAT+CGG + chr3_3:75994089-75994108 Msa0473380:CDS 50.0%
GGGAAAATCTACGTCATCGG+TGG + chr3_3:75994275-75994294 Msa0473380:CDS 50.0%
!! CTCCGACCAATTTGCTGATC+TGG - chr3_3:75994321-75994340 None:intergenic 50.0%
CAGATCAGCAAATTGGTCGG+AGG + chr3_3:75994319-75994338 Msa0473380:CDS 50.0%
GACTAGGAACACTTTCCCAG+CGG - chr3_3:75994364-75994383 None:intergenic 50.0%
AGACGGCAAAGTTTACGCGA+TGG + chr3_3:75994427-75994446 Msa0473380:CDS 50.0%
CTCTCCCACGCTCCATTATA+AGG - chr3_3:75994479-75994498 None:intergenic 50.0%
GTTGGGAGGGAGCTTGATTT+AGG + chr3_3:75994500-75994519 Msa0473380:CDS 50.0%
GGAGGGAGCTTGATTTAGGT+TGG + chr3_3:75994504-75994523 Msa0473380:CDS 50.0%
!! GAGCTTGATTTAGGTTGGCG+CGG + chr3_3:75994509-75994528 Msa0473380:CDS 50.0%
!! AGCTTGATTTAGGTTGGCGC+GGG + chr3_3:75994510-75994529 Msa0473380:CDS 50.0%
GGAGAGCAACTGTTGTGGAT+GGG + chr3_3:75994531-75994550 Msa0473380:CDS 50.0%
GGGTTGTGGAAGGAGTTGAA+AGG + chr3_3:75994608-75994627 Msa0473380:intron 50.0%
GTTTCTGTGTGGGGCTACAA+TGG + chr3_3:75994652-75994671 Msa0473380:CDS 50.0%
GCTACAATGGCTGATGTTGG+TGG + chr3_3:75994665-75994684 Msa0473380:CDS 50.0%
! GGCTGATGTTGGTGGGAAAT+TGG + chr3_3:75994673-75994692 Msa0473380:CDS 50.0%
! GTTTGGGATCTTGATCCTGC+GGG - chr3_3:75995828-75995847 None:intergenic 50.0%
GACCCGTGCAAGGCAGTTTA+TGG - chr3_3:75993877-75993896 None:intergenic 55.0%
AAACGAGGGTGAGGGTTGTG+TGG - chr3_3:75993911-75993930 None:intergenic 55.0%
GAGGTAGAGGATGTGTTGGG+TGG - chr3_3:75993997-75994016 None:intergenic 55.0%
GGAGACGGTGGTTATTGTGG+AGG - chr3_3:75994058-75994077 None:intergenic 55.0%
GGAGGAGACGGTGGTTATTG+TGG - chr3_3:75994061-75994080 None:intergenic 55.0%
CCGATTGTAGGGGAAGGAAG+AGG - chr3_3:75994092-75994111 None:intergenic 55.0%
GTAAGCGGAGCCGATTGTAG+GGG - chr3_3:75994102-75994121 None:intergenic 55.0%
CGTAAGCGGAGCCGATTGTA+GGG - chr3_3:75994103-75994122 None:intergenic 55.0%
!! GTGGTGGATGACAGCGTAAG+CGG - chr3_3:75994117-75994136 None:intergenic 55.0%
! CGTTGACTGAACCACCGATG+AGG - chr3_3:75994148-75994167 None:intergenic 55.0%
AGCGGTGGAATCGGCAATCA+AGG - chr3_3:75994196-75994215 None:intergenic 55.0%
!! TTGATTGCCGATTCCACCGC+TGG + chr3_3:75994195-75994214 Msa0473380:CDS 55.0%
!! GCAGCTGCTGGTGTTATCGA+CGG + chr3_3:75994254-75994273 Msa0473380:CDS 55.0%
!! CAGCTGCTGGTGTTATCGAC+GGG + chr3_3:75994255-75994274 Msa0473380:CDS 55.0%
TCGATCCTGTTACCAACCGC+TGG + chr3_3:75994345-75994364 Msa0473380:CDS 55.0%
CGATCCTGTTACCAACCGCT+GGG + chr3_3:75994346-75994365 Msa0473380:CDS 55.0%
!! CTTTCCCAGCGGTTGGTAAC+AGG - chr3_3:75994353-75994372 None:intergenic 55.0%
AGGAACACTTTCCCAGCGGT+TGG - chr3_3:75994360-75994379 None:intergenic 55.0%
GAAATGGATGCACGCTAGCG+CGG + chr3_3:75994400-75994419 Msa0473380:CDS 55.0%
CGGCAAAGTTTACGCGATGG+CGG + chr3_3:75994430-75994449 Msa0473380:CDS 55.0%
GGGAGAGCAACTGTTGTGGA+TGG + chr3_3:75994530-75994549 Msa0473380:CDS 55.0%
GTAGCCCCACACAGAAACCT+TGG - chr3_3:75994650-75994669 None:intergenic 55.0%
GGGGCTACAATGGCTGATGT+TGG + chr3_3:75994662-75994681 Msa0473380:CDS 55.0%
GACCCGTGCAAGGCAGTTTA+TGG - chr3_3:75993877-75993896 None:intergenic 55.0%
AAACGAGGGTGAGGGTTGTG+TGG - chr3_3:75993911-75993930 None:intergenic 55.0%
GAGGTAGAGGATGTGTTGGG+TGG - chr3_3:75993997-75994016 None:intergenic 55.0%
GGAGACGGTGGTTATTGTGG+AGG - chr3_3:75994058-75994077 None:intergenic 55.0%
GGAGGAGACGGTGGTTATTG+TGG - chr3_3:75994061-75994080 None:intergenic 55.0%
CCGATTGTAGGGGAAGGAAG+AGG - chr3_3:75994092-75994111 None:intergenic 55.0%
GTAAGCGGAGCCGATTGTAG+GGG - chr3_3:75994102-75994121 None:intergenic 55.0%
CGTAAGCGGAGCCGATTGTA+GGG - chr3_3:75994103-75994122 None:intergenic 55.0%
!! GTGGTGGATGACAGCGTAAG+CGG - chr3_3:75994117-75994136 None:intergenic 55.0%
! CGTTGACTGAACCACCGATG+AGG - chr3_3:75994148-75994167 None:intergenic 55.0%
AGCGGTGGAATCGGCAATCA+AGG - chr3_3:75994196-75994215 None:intergenic 55.0%
!! TTGATTGCCGATTCCACCGC+TGG + chr3_3:75994195-75994214 Msa0473380:CDS 55.0%
!! GCAGCTGCTGGTGTTATCGA+CGG + chr3_3:75994254-75994273 Msa0473380:CDS 55.0%
!! CAGCTGCTGGTGTTATCGAC+GGG + chr3_3:75994255-75994274 Msa0473380:CDS 55.0%
TCGATCCTGTTACCAACCGC+TGG + chr3_3:75994345-75994364 Msa0473380:CDS 55.0%
CGATCCTGTTACCAACCGCT+GGG + chr3_3:75994346-75994365 Msa0473380:CDS 55.0%
!! CTTTCCCAGCGGTTGGTAAC+AGG - chr3_3:75994353-75994372 None:intergenic 55.0%
AGGAACACTTTCCCAGCGGT+TGG - chr3_3:75994360-75994379 None:intergenic 55.0%
GAAATGGATGCACGCTAGCG+CGG + chr3_3:75994400-75994419 Msa0473380:CDS 55.0%
CGGCAAAGTTTACGCGATGG+CGG + chr3_3:75994430-75994449 Msa0473380:CDS 55.0%
GGGAGAGCAACTGTTGTGGA+TGG + chr3_3:75994530-75994549 Msa0473380:CDS 55.0%
GTAGCCCCACACAGAAACCT+TGG - chr3_3:75994650-75994669 None:intergenic 55.0%
GGGGCTACAATGGCTGATGT+TGG + chr3_3:75994662-75994681 Msa0473380:CDS 55.0%
! GGGTTGTGTGGTGAGAGCGT+GGG - chr3_3:75993899-75993918 None:intergenic 60.0%
AGGGTTGTGTGGTGAGAGCG+TGG - chr3_3:75993900-75993919 None:intergenic 60.0%
GAGCGAGCGGTGAAGAAGAG+TGG - chr3_3:75993963-75993982 None:intergenic 60.0%
GGAAGGGATGAGAGAGCGAG+CGG - chr3_3:75993976-75993995 None:intergenic 60.0%
GTGTGCGGAGAGAGAGGTAG+AGG - chr3_3:75994010-75994029 None:intergenic 60.0%
AAGGAAGAGGAGGGAGAGGG+AGG - chr3_3:75994079-75994098 None:intergenic 60.0%
GGGAAGGAAGAGGAGGGAGA+GGG - chr3_3:75994082-75994101 None:intergenic 60.0%
GCGTAAGCGGAGCCGATTGT+AGG - chr3_3:75994104-75994123 None:intergenic 60.0%
!! GTTTACGCGATGGCGGATCG+CGG + chr3_3:75994437-75994456 Msa0473380:CDS 60.0%
! AATGGAGCGTGGGAGAGCGT+TGG + chr3_3:75994482-75994501 Msa0473380:CDS 60.0%
!! ATGGAGCGTGGGAGAGCGTT+GGG + chr3_3:75994483-75994502 Msa0473380:CDS 60.0%
! GGGTTGTGTGGTGAGAGCGT+GGG - chr3_3:75993899-75993918 None:intergenic 60.0%
AGGGTTGTGTGGTGAGAGCG+TGG - chr3_3:75993900-75993919 None:intergenic 60.0%
GAGCGAGCGGTGAAGAAGAG+TGG - chr3_3:75993963-75993982 None:intergenic 60.0%
GGAAGGGATGAGAGAGCGAG+CGG - chr3_3:75993976-75993995 None:intergenic 60.0%
GTGTGCGGAGAGAGAGGTAG+AGG - chr3_3:75994010-75994029 None:intergenic 60.0%
AAGGAAGAGGAGGGAGAGGG+AGG - chr3_3:75994079-75994098 None:intergenic 60.0%
GGGAAGGAAGAGGAGGGAGA+GGG - chr3_3:75994082-75994101 None:intergenic 60.0%
GCGTAAGCGGAGCCGATTGT+AGG - chr3_3:75994104-75994123 None:intergenic 60.0%
!! GTTTACGCGATGGCGGATCG+CGG + chr3_3:75994437-75994456 Msa0473380:CDS 60.0%
! AATGGAGCGTGGGAGAGCGT+TGG + chr3_3:75994482-75994501 Msa0473380:CDS 60.0%
!! ATGGAGCGTGGGAGAGCGTT+GGG + chr3_3:75994483-75994502 Msa0473380:CDS 60.0%
TGGAGCGTGTGCGGAGAGAG+AGG - chr3_3:75994016-75994035 None:intergenic 65.0%
GGAGAGAGGTGGAGCGTGTG+CGG - chr3_3:75994025-75994044 None:intergenic 65.0%
GAGGAGGGAGAGGGAGGAGA+CGG - chr3_3:75994073-75994092 None:intergenic 65.0%
GGGGAAGGAAGAGGAGGGAG+AGG - chr3_3:75994083-75994102 None:intergenic 65.0%
GCGGAGCCGATTGTAGGGGA+AGG - chr3_3:75994098-75994117 None:intergenic 65.0%
GAATTCACGCGCCACCCGCA+TGG - chr3_3:75994234-75994253 None:intergenic 65.0%
GCGCGTGAATTCGCAGCTGC+TGG + chr3_3:75994242-75994261 Msa0473380:CDS 65.0%
CGTCATCGGTGGTTGCGTGC+CGG + chr3_3:75994286-75994305 Msa0473380:CDS 65.0%
CACGCTAGCGCGGTCGTAGA+CGG + chr3_3:75994410-75994429 Msa0473380:CDS 65.0%
!! AGCGTGGGAGAGCGTTGGGA+GGG + chr3_3:75994487-75994506 Msa0473380:CDS 65.0%
GCGCGGGAGAGCAACTGTTG+TGG + chr3_3:75994526-75994545 Msa0473380:CDS 65.0%
TGGAGCGTGTGCGGAGAGAG+AGG - chr3_3:75994016-75994035 None:intergenic 65.0%
GGAGAGAGGTGGAGCGTGTG+CGG - chr3_3:75994025-75994044 None:intergenic 65.0%
GAGGAGGGAGAGGGAGGAGA+CGG - chr3_3:75994073-75994092 None:intergenic 65.0%
GGGGAAGGAAGAGGAGGGAG+AGG - chr3_3:75994083-75994102 None:intergenic 65.0%
GCGGAGCCGATTGTAGGGGA+AGG - chr3_3:75994098-75994117 None:intergenic 65.0%
GAATTCACGCGCCACCCGCA+TGG - chr3_3:75994234-75994253 None:intergenic 65.0%
GCGCGTGAATTCGCAGCTGC+TGG + chr3_3:75994242-75994261 Msa0473380:CDS 65.0%
CGTCATCGGTGGTTGCGTGC+CGG + chr3_3:75994286-75994305 Msa0473380:CDS 65.0%
CACGCTAGCGCGGTCGTAGA+CGG + chr3_3:75994410-75994429 Msa0473380:CDS 65.0%
!! AGCGTGGGAGAGCGTTGGGA+GGG + chr3_3:75994487-75994506 Msa0473380:CDS 65.0%
GCGCGGGAGAGCAACTGTTG+TGG + chr3_3:75994526-75994545 Msa0473380:CDS 65.0%
! GAGAGCGTGGGACCCGTGCA+AGG - chr3_3:75993887-75993906 None:intergenic 70.0%
GAGGGAGAGGGAGGAGACGG+TGG - chr3_3:75994070-75994089 None:intergenic 70.0%
CGGGGAGCCAGCGGTGGAAT+CGG - chr3_3:75994205-75994224 None:intergenic 70.0%
!! CGATTCCACCGCTGGCTCCC+CGG + chr3_3:75994203-75994222 Msa0473380:CDS 70.0%
TCACGCGCCACCCGCATGGA+GGG - chr3_3:75994230-75994249 None:intergenic 70.0%
TTCACGCGCCACCCGCATGG+AGG - chr3_3:75994231-75994250 None:intergenic 70.0%
!! TACGCGATGGCGGATCGCGG+TGG + chr3_3:75994440-75994459 Msa0473380:CDS 70.0%
!! GAGCGTGGGAGAGCGTTGGG+AGG + chr3_3:75994486-75994505 Msa0473380:CDS 70.0%
! GAGAGCGTGGGACCCGTGCA+AGG - chr3_3:75993887-75993906 None:intergenic 70.0%
GAGGGAGAGGGAGGAGACGG+TGG - chr3_3:75994070-75994089 None:intergenic 70.0%
CGGGGAGCCAGCGGTGGAAT+CGG - chr3_3:75994205-75994224 None:intergenic 70.0%
!! CGATTCCACCGCTGGCTCCC+CGG + chr3_3:75994203-75994222 Msa0473380:CDS 70.0%
TCACGCGCCACCCGCATGGA+GGG - chr3_3:75994230-75994249 None:intergenic 70.0%
TTCACGCGCCACCCGCATGG+AGG - chr3_3:75994231-75994250 None:intergenic 70.0%
!! TACGCGATGGCGGATCGCGG+TGG + chr3_3:75994440-75994459 Msa0473380:CDS 70.0%
!! GAGCGTGGGAGAGCGTTGGG+AGG + chr3_3:75994486-75994505 Msa0473380:CDS 70.0%
TGGAGGGACCGGGGAGCCAG+CGG - chr3_3:75994214-75994233 None:intergenic 75.0%
GGCTCCCCGGTCCCTCCATG+CGG + chr3_3:75994216-75994235 Msa0473380:CDS 75.0%
GCTCCCCGGTCCCTCCATGC+GGG + chr3_3:75994217-75994236 Msa0473380:CDS 75.0%
CCACCCGCATGGAGGGACCG+GGG - chr3_3:75994223-75994242 None:intergenic 75.0%
GCCACCCGCATGGAGGGACC+GGG - chr3_3:75994224-75994243 None:intergenic 75.0%
CGCCACCCGCATGGAGGGAC+CGG - chr3_3:75994225-75994244 None:intergenic 75.0%
TGGAGGGACCGGGGAGCCAG+CGG - chr3_3:75994214-75994233 None:intergenic 75.0%
GGCTCCCCGGTCCCTCCATG+CGG + chr3_3:75994216-75994235 Msa0473380:CDS 75.0%
GCTCCCCGGTCCCTCCATGC+GGG + chr3_3:75994217-75994236 Msa0473380:CDS 75.0%
CCACCCGCATGGAGGGACCG+GGG - chr3_3:75994223-75994242 None:intergenic 75.0%
GCCACCCGCATGGAGGGACC+GGG - chr3_3:75994224-75994243 None:intergenic 75.0%
CGCCACCCGCATGGAGGGAC+CGG - chr3_3:75994225-75994244 None:intergenic 75.0%
! AGGGACCGGGGAGCCAGCGG+TGG - chr3_3:75994211-75994230 None:intergenic 80.0%
! CCCCGGTCCCTCCATGCGGG+TGG + chr3_3:75994220-75994239 Msa0473380:CDS 80.0%
! AGGGACCGGGGAGCCAGCGG+TGG - chr3_3:75994211-75994230 None:intergenic 80.0%
! CCCCGGTCCCTCCATGCGGG+TGG + chr3_3:75994220-75994239 Msa0473380:CDS 80.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 75993867 75996261 75993867 ID=Msa0473380;Name=Msa0473380
chr3_3 mRNA 75993867 75996261 75993867 ID=Msa0473380-mRNA-1;Parent=Msa0473380;Name=Msa0473380-mRNA-1;_AED=0.06;_eAED=0.07;_QI=0|0|0.33|1|0|0|3|397|343
chr3_3 exon 75993867 75994590 75993867 ID=Msa0473380-mRNA-1:exon:19837;Parent=Msa0473380-mRNA-1
chr3_3 exon 75994630 75994872 75994630 ID=Msa0473380-mRNA-1:exon:19838;Parent=Msa0473380-mRNA-1
chr3_3 exon 75995800 75996261 75995800 ID=Msa0473380-mRNA-1:exon:19839;Parent=Msa0473380-mRNA-1
chr3_3 CDS 75993867 75994590 75993867 ID=Msa0473380-mRNA-1:cds;Parent=Msa0473380-mRNA-1
chr3_3 CDS 75994630 75994872 75994630 ID=Msa0473380-mRNA-1:cds;Parent=Msa0473380-mRNA-1
chr3_3 CDS 75995800 75995864 75995800 ID=Msa0473380-mRNA-1:cds;Parent=Msa0473380-mRNA-1
chr3_3 three_prime_UTR 75995865 75996261 75995865 ID=Msa0473380-mRNA-1:three_prime_utr;Parent=Msa0473380-mRNA-1
Gene Sequence

>Msa0473380

GACGTAGCCATAAACTGCCTTGCACGGGTCCCACGCTCTCACCACACAACCCTCACCCTCGTTTCCAAACCAATCCATTCTCTCCTCTCTTCTCCACTCTTCTTCACCGCTCGCTCTCTCATCCCTTCCACCCAACACATCCTCTACCTCTCTCTCCGCACACGCTCCACCTCTCTCCAATTCTTCACCCTCCACAATAACCACCGTCTCCTCCCTCTCCCTCCTCTTCCTTCCCCTACAATCGGCTCCGCTTACGCTGTCATCCACCACAAAATCTACCTCATCGGTGGTTCAGTCAACGATGTACCATCTCGTCATGTATGGATCCTTGATTGCCGATTCCACCGCTGGCTCCCCGGTCCCTCCATGCGGGTGGCGCGTGAATTCGCAGCTGCTGGTGTTATCGACGGGAAAATCTACGTCATCGGTGGTTGCGTGCCGGATAATTTTTCCAGATCAGCAAATTGGTCGGAGGTTTTCGATCCTGTTACCAACCGCTGGGAAAGTGTTCCTAGTCCACCAGAAATTCGTGAGAAATGGATGCACGCTAGCGCGGTCGTAGACGGCAAAGTTTACGCGATGGCGGATCGCGGTGGTGTTTTGTTTGATCCTTATAATGGAGCGTGGGAGAGCGTTGGGAGGGAGCTTGATTTAGGTTGGCGCGGGAGAGCAACTGTTGTGGATGGGATTTTGTATTGCTATGATTATTTAGGGAAAATTAAGGGTTTGGATAAGAGTTTACCAAGGTTTCTGTGTGGGGCTACAATGGCTGATGTTGGTGGGAAATTGGTTGTGGTTTGGGAGTGTCAAAGGAATTTGAATGCAAATAAGAAGGGGAAAGAAATGGAGATTTGGTGTGCTGAGATTGATGTGAAGAAGAAGAAGAATAAGGATGGGGAATTGTGGGGTGAAGTTTGTTGGTTGAATAATGTTCTTTCTGTTCCTAAAGGATCTTCCATTGTTCATTGTCACCTGTTTCTATCAAAACATGTCCCGCAGGATCAAGATCCCAAACACCTCATGATTGCATAG
Protein sequence

>Msa0473380

DVAINCLARVPRSHHTTLTLVSKPIHSLLSSPLFFTARSLIPSTQHILYLSLRTRSTSLQFFTLHNNHRLLPLPPLPSPTIGSAYAVIHHKIYLIGGSVNDVPSRHVWILDCRFHRWLPGPSMRVAREFAAAGVIDGKIYVIGGCVPDNFSRSANWSEVFDPVTNRWESVPSPPEIREKWMHASAVVDGKVYAMADRGGVLFDPYNGAWESVGRELDLGWRGRATVVDGILYCYDYLGKIKGLDKSLPRFLCGATMADVGGKLVVVWECQRNLNANKKGKEMEIWCAEIDVKKKKNKDGELWGEVCWLNNVLSVPKGSSIVHCHLFLSKHVPQDQDPKHLMIA*