Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238440 | XP_003627593.1 | 85.714 | 273 | 9 | 2 | 1 | 245 | 1 | 271 | 1.48e-160 | 457 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238440 | sp|Q9M2E2|SDR1_ARATH | 51.282 | 273 | 101 | 4 | 1 | 243 | 1 | 271 | 2.35e-90 | 272 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238440 | G7LBT1 | 85.714 | 273 | 9 | 2 | 1 | 245 | 1 | 271 | 7.09e-161 | 457 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0640290 | Msa1238440 | 0.806014 | 1.010359e-49 | -8.615850e-47 |
| Msa0645150 | Msa1238440 | 0.804691 | 1.913284e-49 | -8.615850e-47 |
| Msa0824860 | Msa1238440 | 0.812914 | 3.335312e-51 | -8.615850e-47 |
| Msa0163340 | Msa1238440 | 0.804374 | 2.227703e-49 | -8.615850e-47 |
| Msa1233650 | Msa1238440 | 0.800925 | 1.146626e-48 | -8.615850e-47 |
| Msa1238210 | Msa1238440 | 0.807306 | 5.391747e-50 | -8.615850e-47 |
| Msa1238440 | Msa1270010 | 0.879250 | 1.452545e-69 | -8.615850e-47 |
| Msa1238440 | Msa1319290 | 0.822285 | 2.570616e-53 | -8.615850e-47 |
| Msa1238440 | Msa1411550 | 0.823717 | 1.191793e-53 | -8.615850e-47 |
| Msa1238440 | Msa1459610 | 0.803259 | 3.796567e-49 | -8.615850e-47 |
| Msa0366510 | Msa1238440 | 0.814534 | 1.467385e-51 | -8.615850e-47 |
| Msa0414480 | Msa1238440 | 0.801487 | 8.800113e-49 | -8.615850e-47 |
| Msa0481410 | Msa1238440 | 0.826143 | 3.189166e-54 | -8.615850e-47 |
| Msa1024350 | Msa1238440 | 0.801052 | 1.080093e-48 | -8.615850e-47 |
| Msa1061670 | Msa1238440 | 0.843144 | 1.678007e-58 | -8.615850e-47 |
| Msa1106680 | Msa1238440 | 0.807976 | 3.885585e-50 | -8.615850e-47 |
| Msa1106960 | Msa1238440 | 0.834562 | 2.789588e-56 | -8.615850e-47 |
| Msa0266650 | Msa1238440 | 0.800227 | 1.590681e-48 | -8.615850e-47 |
| Msa1109880 | Msa1238440 | 0.804922 | 1.711536e-49 | -8.615850e-47 |
| Msa0532680 | Msa1238440 | 0.801896 | 7.253636e-49 | -8.615850e-47 |
| Msa0533520 | Msa1238440 | 0.800912 | 1.153777e-48 | -8.615850e-47 |
| Msa0535570 | Msa1238440 | 0.800455 | 1.429648e-48 | -8.615850e-47 |
| Msa0538450 | Msa1238440 | 0.806442 | 8.209300e-50 | -8.615850e-47 |
| Msa0543740 | Msa1238440 | 0.803773 | 2.971119e-49 | -8.615850e-47 |
| Msa0589450 | Msa1238440 | 0.800133 | 1.662493e-48 | -8.615850e-47 |
| Msa0591490 | Msa1238440 | 0.820307 | 7.350846e-53 | -8.615850e-47 |
| Msa0863840 | Msa1238440 | 0.804490 | 2.107413e-49 | -8.615850e-47 |
| Msa0896920 | Msa1238440 | 0.807150 | 5.818248e-50 | -8.615850e-47 |
| Msa0913550 | Msa1238440 | 0.811424 | 7.051475e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238440 | MtrunA17_Chr8g0349721 | 85.714 | 273 | 9 | 2 | 1 | 245 | 1 | 271 | 1.37e-164 | 457 |
| Msa1238440 | MtrunA17_Chr8g0349701 | 85.714 | 273 | 9 | 2 | 1 | 245 | 1 | 271 | 1.74e-164 | 457 |
| Msa1238440 | MtrunA17_Chr7g0247041 | 61.798 | 267 | 70 | 4 | 7 | 243 | 6 | 270 | 2.45e-105 | 307 |
| Msa1238440 | MtrunA17_Chr8g0349801 | 51.825 | 274 | 101 | 3 | 1 | 243 | 1 | 274 | 1.94e-92 | 275 |
| Msa1238440 | MtrunA17_Chr8g0349781 | 51.460 | 274 | 102 | 3 | 1 | 243 | 1 | 274 | 2.23e-91 | 272 |
| Msa1238440 | MtrunA17_Chr8g0349811 | 51.095 | 274 | 103 | 3 | 1 | 243 | 1 | 274 | 5.13e-90 | 268 |
| Msa1238440 | MtrunA17_Chr8g0349671 | 52.555 | 274 | 97 | 5 | 1 | 242 | 1 | 273 | 5.73e-90 | 268 |
| Msa1238440 | MtrunA17_Chr8g0349851 | 50.909 | 275 | 103 | 4 | 1 | 243 | 1 | 275 | 4.20e-89 | 266 |
| Msa1238440 | MtrunA17_Chr8g0349751 | 51.471 | 272 | 100 | 4 | 1 | 240 | 51 | 322 | 2.75e-88 | 266 |
| Msa1238440 | MtrunA17_Chr8g0349641 | 49.324 | 296 | 114 | 5 | 1 | 261 | 1 | 295 | 5.93e-88 | 263 |
| Msa1238440 | MtrunA17_Chr8g0349831 | 50.549 | 273 | 103 | 3 | 3 | 243 | 4 | 276 | 1.17e-86 | 260 |
| Msa1238440 | MtrunA17_Chr7g0247011 | 50.746 | 268 | 95 | 4 | 1 | 240 | 1 | 259 | 2.73e-86 | 258 |
| Msa1238440 | MtrunA17_Chr8g0349741 | 51.301 | 269 | 93 | 5 | 1 | 240 | 1 | 260 | 8.95e-86 | 257 |
| Msa1238440 | MtrunA17_Chr5g0425391 | 50.182 | 275 | 98 | 3 | 1 | 241 | 1 | 270 | 2.10e-85 | 256 |
| Msa1238440 | MtrunA17_Chr8g0349771 | 49.265 | 272 | 105 | 3 | 1 | 240 | 1 | 271 | 1.54e-84 | 254 |
| Msa1238440 | MtrunA17_Chr8g0349761 | 50.189 | 265 | 101 | 3 | 7 | 240 | 8 | 272 | 1.46e-83 | 252 |
| Msa1238440 | MtrunA17_Chr3g0118511 | 47.985 | 273 | 105 | 5 | 7 | 243 | 3 | 274 | 2.43e-75 | 231 |
| Msa1238440 | MtrunA17_Chr7g0247031 | 48.106 | 264 | 97 | 6 | 7 | 240 | 8 | 261 | 1.67e-74 | 228 |
| Msa1238440 | MtrunA17_Chr8g0349651 | 47.325 | 243 | 96 | 4 | 31 | 242 | 10 | 251 | 1.10e-66 | 208 |
| Msa1238440 | MtrunA17_Chr7g0267881 | 44.444 | 234 | 71 | 3 | 7 | 207 | 9 | 216 | 2.29e-58 | 186 |
| Msa1238440 | MtrunA17_Chr3g0131521 | 34.799 | 273 | 116 | 5 | 9 | 242 | 37 | 286 | 2.83e-47 | 159 |
| Msa1238440 | MtrunA17_Chr1g0160511 | 33.700 | 273 | 119 | 5 | 9 | 242 | 42 | 291 | 6.15e-47 | 159 |
| Msa1238440 | MtrunA17_Chr8g0385581 | 31.136 | 273 | 129 | 6 | 9 | 242 | 39 | 291 | 1.96e-38 | 136 |
| Msa1238440 | MtrunA17_Chr5g0437701 | 66.216 | 74 | 25 | 0 | 170 | 243 | 31 | 104 | 4.33e-30 | 109 |
| Msa1238440 | MtrunA17_Chr4g0045711 | 50.575 | 87 | 38 | 3 | 9 | 90 | 24 | 110 | 2.02e-15 | 70.9 |
| Msa1238440 | MtrunA17_Chr4g0045691 | 27.673 | 159 | 78 | 3 | 133 | 254 | 1 | 159 | 2.32e-15 | 72.4 |
| Msa1238440 | MtrunA17_Chr3g0112141 | 30.804 | 224 | 115 | 7 | 9 | 229 | 22 | 208 | 9.93e-13 | 66.6 |
| Msa1238440 | MtrunA17_Chr3g0112151 | 29.333 | 225 | 119 | 7 | 9 | 230 | 91 | 278 | 3.30e-12 | 65.5 |
| Msa1238440 | MtrunA17_Chr4g0058731 | 28.452 | 239 | 118 | 10 | 9 | 227 | 51 | 256 | 4.26e-12 | 65.5 |
| Msa1238440 | MtrunA17_Chr3g0124471 | 27.511 | 229 | 119 | 8 | 3 | 227 | 25 | 210 | 1.38e-11 | 63.5 |
| Msa1238440 | MtrunA17_Chr7g0239501 | 29.911 | 224 | 117 | 7 | 9 | 229 | 21 | 207 | 3.60e-11 | 62.0 |
| Msa1238440 | MtrunA17_Chr6g0466681 | 30.000 | 160 | 81 | 3 | 10 | 164 | 70 | 203 | 4.47e-11 | 62.4 |
| Msa1238440 | MtrunA17_Chr4g0025971 | 24.583 | 240 | 132 | 8 | 7 | 240 | 17 | 213 | 5.61e-11 | 61.6 |
| Msa1238440 | MtrunA17_Chr4g0054341 | 24.783 | 230 | 128 | 7 | 4 | 229 | 2 | 190 | 6.74e-11 | 61.2 |
| Msa1238440 | MtrunA17_Chr3g0112171 | 28.571 | 224 | 120 | 7 | 9 | 229 | 20 | 206 | 7.34e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238440 | AT3G61220.1 | 51.282 | 273 | 101 | 4 | 1 | 243 | 1 | 271 | 2.39e-91 | 272 |
| Msa1238440 | AT3G61220.2 | 51.685 | 267 | 97 | 4 | 7 | 243 | 14 | 278 | 1.82e-89 | 268 |
| Msa1238440 | AT3G61220.3 | 51.685 | 267 | 97 | 4 | 7 | 243 | 38 | 302 | 5.97e-89 | 267 |
| Msa1238440 | AT2G24190.1 | 49.817 | 273 | 105 | 4 | 1 | 243 | 1 | 271 | 1.98e-87 | 262 |
| Msa1238440 | AT2G24190.2 | 49.813 | 267 | 102 | 4 | 7 | 243 | 12 | 276 | 2.22e-85 | 257 |
| Msa1238440 | AT1G01800.1 | 47.778 | 270 | 111 | 3 | 4 | 243 | 2 | 271 | 1.58e-79 | 242 |
| Msa1238440 | AT3G59710.1 | 36.641 | 262 | 114 | 6 | 9 | 240 | 31 | 270 | 3.12e-45 | 154 |
| Msa1238440 | AT3G59710.3 | 36.641 | 262 | 114 | 6 | 9 | 240 | 21 | 260 | 3.59e-45 | 154 |
| Msa1238440 | AT5G61830.1 | 35.897 | 273 | 115 | 4 | 9 | 242 | 39 | 290 | 3.84e-45 | 154 |
| Msa1238440 | AT5G61830.2 | 35.897 | 273 | 115 | 4 | 9 | 242 | 39 | 290 | 3.84e-45 | 154 |
| Msa1238440 | AT3G59710.2 | 36.641 | 262 | 114 | 6 | 9 | 240 | 50 | 289 | 5.60e-45 | 154 |
| Msa1238440 | AT5G51030.1 | 32.130 | 277 | 126 | 5 | 5 | 242 | 36 | 289 | 2.06e-43 | 150 |
| Msa1238440 | AT1G01800.2 | 42.857 | 182 | 76 | 1 | 90 | 243 | 55 | 236 | 8.46e-42 | 144 |
| Msa1238440 | AT5G50700.1 | 28.194 | 227 | 122 | 7 | 10 | 233 | 51 | 239 | 3.65e-13 | 68.9 |
| Msa1238440 | AT5G50600.1 | 28.194 | 227 | 122 | 7 | 10 | 233 | 51 | 239 | 3.65e-13 | 68.9 |
| Msa1238440 | AT1G49670.1 | 25.703 | 249 | 131 | 9 | 9 | 237 | 9 | 223 | 1.65e-11 | 64.7 |
| Msa1238440 | AT1G49670.2 | 25.703 | 249 | 131 | 9 | 9 | 237 | 9 | 223 | 1.94e-11 | 64.3 |
| Msa1238440 | AT3G47350.1 | 26.724 | 232 | 128 | 8 | 7 | 232 | 47 | 242 | 1.96e-11 | 63.5 |
| Msa1238440 | AT3G47350.2 | 26.457 | 223 | 127 | 7 | 7 | 228 | 47 | 233 | 3.05e-11 | 63.2 |
Find 48 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTGGCCAACATTTGTTTC+TGG | 0.189389 | 8_2:-18711267 | Msa1238440:CDS |
| TTATGGGATATGCAAGAAAT+TGG | 0.259442 | 8_2:-18712871 | Msa1238440:CDS |
| GAGTTCATCAAAATCAAATT+TGG | 0.260925 | 8_2:-18712699 | Msa1238440:CDS |
| ACTAAAGAAGAAACACTTAT+AGG | 0.263056 | 8_2:+18712723 | None:intergenic |
| TGGAGAGAATGTTGTTAAAA+AGG | 0.269327 | 8_2:-18712536 | Msa1238440:intron |
| ATTTGGAAAACTTGATATCT+TGG | 0.275930 | 8_2:-18712682 | Msa1238440:intron |
| GCTAATAAAGGAATTGGTTA+TGG | 0.301681 | 8_2:-18712888 | Msa1238440:CDS |
| GTGAACAATGCTGGTGTTGC+TGG | 0.318704 | 8_2:-18712571 | Msa1238440:CDS |
| TGTGTTGAAATAAACTTCTT+TGG | 0.327150 | 8_2:-18711743 | Msa1238440:CDS |
| TCTAGGTATGCAGTTGTAAC+AGG | 0.330059 | 8_2:-18712912 | Msa1238440:intron |
| AACAAATTGGTGTAAGTTGA+TGG | 0.332497 | 8_2:-18707486 | None:intergenic |
| TTTGTTTGTTCAAAACAAAT+TGG | 0.346814 | 8_2:-18707499 | Msa1238440:CDS |
| CTAAAGAAGAAACACTTATA+GGG | 0.376231 | 8_2:+18712724 | None:intergenic |
| GTTAGGCCTTTCTGACTTTG+TGG | 0.382164 | 8_2:-18712772 | Msa1238440:CDS |
| ATTGGCTTCAAGAGGTGTTA+TGG | 0.387557 | 8_2:-18712853 | Msa1238440:CDS |
| ATATCAGTCTTAACAAAGTC+AGG | 0.388627 | 8_2:+18711159 | None:intergenic |
| CAATGACAGAAGCATCAAAA+AGG | 0.391122 | 8_2:-18713048 | Msa1238440:intron |
| GTAGAAAGTTTGAAAGAGTT+AGG | 0.391428 | 8_2:-18712789 | Msa1238440:CDS |
| CAAACAAATATCACATCATA+TGG | 0.397816 | 8_2:+18707514 | None:intergenic |
| ACAGGAGCTAATAAAGGAAT+TGG | 0.406883 | 8_2:-18712894 | Msa1238440:CDS |
| GTTTATTTCAACACATTCTT+CGG | 0.435982 | 8_2:+18711751 | None:intergenic |
| CTCTAGACGTGGAAAATTCA+AGG | 0.435985 | 8_2:-18711648 | Msa1238440:intron |
| CTAATAAAGGAATTGGTTAT+GGG | 0.437393 | 8_2:-18712887 | Msa1238440:CDS |
| AGAGGAGACATTGACAATCC+TGG | 0.448062 | 8_2:+18711667 | None:intergenic |
| TGAAGTAGATAGTTGGAGAA+GGG | 0.484408 | 8_2:+18711691 | None:intergenic |
| CTGATATTAACGAGATGAAA+GGG | 0.496322 | 8_2:-18711143 | Msa1238440:CDS |
| GTTGTAACAGGAGCTAATAA+AGG | 0.502871 | 8_2:-18712900 | Msa1238440:CDS |
| ACTGCTAGAAATGAGAAAAG+AGG | 0.505341 | 8_2:-18712822 | Msa1238440:CDS |
| TCCTGGGTGAAGTAGATAGT+TGG | 0.511882 | 8_2:+18711684 | None:intergenic |
| AGATTACAAAGAAGGAGCAT+TGG | 0.531996 | 8_2:-18711298 | Msa1238440:CDS |
| GAGGAGACATTGACAATCCT+GGG | 0.550899 | 8_2:+18711668 | None:intergenic |
| CAGCTTTAAATTCTTACACA+AGG | 0.553733 | 8_2:-18711227 | Msa1238440:CDS |
| TAAGGGGTGAAATATCAGAT+TGG | 0.556719 | 8_2:-18711805 | Msa1238440:CDS |
| GTGAAGTAGATAGTTGGAGA+AGG | 0.564346 | 8_2:+18711690 | None:intergenic |
| GAAGTAGATAGTTGGAGAAG+GGG | 0.573620 | 8_2:+18711692 | None:intergenic |
| ACTGATATTAACGAGATGAA+AGG | 0.577779 | 8_2:-18711144 | Msa1238440:CDS |
| GTACCGTAGGTGAACAATGC+TGG | 0.579073 | 8_2:-18712580 | Msa1238440:intron |
| TGCAAGAAATTGGCTTCAAG+AGG | 0.591172 | 8_2:-18712861 | Msa1238440:CDS |
| ATTTGTTTCTGGTTACACAA+TGG | 0.603998 | 8_2:-18711256 | Msa1238440:CDS |
| GTTGCTGGAGGAATAGTGAA+TGG | 0.611511 | 8_2:-18712556 | Msa1238440:CDS |
| CACAATTTATGCGGAAACGA+GGG | 0.612527 | 8_2:+18711187 | None:intergenic |
| ACACAATTTATGCGGAAACG+AGG | 0.622206 | 8_2:+18711186 | None:intergenic |
| TATCAGTCTTAACAAAGTCA+GGG | 0.628316 | 8_2:+18711160 | None:intergenic |
| TCCAACTATCTACTTCACCC+AGG | 0.646857 | 8_2:-18711685 | Msa1238440:CDS |
| GTGTAACCAGAAACAAATGT+TGG | 0.648385 | 8_2:+18711261 | None:intergenic |
| GTCAATGTCTCCTCTAGACG+TGG | 0.652586 | 8_2:-18711659 | Msa1238440:CDS |
| AACAATGCTGGTGTTGCTGG+AGG | 0.655043 | 8_2:-18712568 | Msa1238440:CDS |
| CAGGGCATACACAATTTATG+CGG | 0.694860 | 8_2:+18711178 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATAAAGTTTATTTATATT+TGG | - | chr8_2:18707924-18707943 | Msa1238440:intron | 10.0% |
| !!! | TTTGAGTAATAAATTTTAAA+TGG | - | chr8_2:18708467-18708486 | Msa1238440:intron | 10.0% |
| !!! | ATAAAGTTTTAAGTTTTAAA+TGG | - | chr8_2:18708533-18708552 | Msa1238440:intron | 10.0% |
| !! | CTATTTATAAAAATTATTAC+CGG | + | chr8_2:18709006-18709025 | None:intergenic | 10.0% |
| !! | TTATATGTATATATACTTTA+AGG | + | chr8_2:18709576-18709595 | None:intergenic | 10.0% |
| !!! | TATGTATTTTTTTTTTTACA+AGG | + | chr8_2:18710404-18710423 | None:intergenic | 10.0% |
| !! | CAGTTAAAATTTATATATAT+AGG | + | chr8_2:18712768-18712787 | None:intergenic | 10.0% |
| !!! | TTATTTATATTTGGAATCAT+TGG | - | chr8_2:18707933-18707952 | Msa1238440:intron | 15.0% |
| !!! | TAATAAATTTTAAATGGTAG+AGG | - | chr8_2:18708473-18708492 | Msa1238440:intron | 15.0% |
| !!! | AAAACTTAAAACTTTATTTG+AGG | + | chr8_2:18708530-18708549 | None:intergenic | 15.0% |
| !! | TCAATAATATATATTTGTGT+TGG | - | chr8_2:18708566-18708585 | Msa1238440:intron | 15.0% |
| !!! | ATGAATTTTCAAATACTTTA+GGG | - | chr8_2:18709671-18709690 | Msa1238440:intron | 15.0% |
| !! | TATATATTTAAGGACTAAAT+TGG | - | chr8_2:18709732-18709751 | Msa1238440:intron | 15.0% |
| !!! | CATAATTTAAGTTTACATAT+AGG | + | chr8_2:18710982-18711001 | None:intergenic | 15.0% |
| !!! | GTATTGATTTTTATTTTTGA+TGG | + | chr8_2:18711471-18711490 | None:intergenic | 15.0% |
| !!! | GATCAAAATTTTATTTTTGA+TGG | + | chr8_2:18711510-18711529 | None:intergenic | 15.0% |
| !!! | ATATTAATTAGCATTTTTTC+TGG | + | chr8_2:18711972-18711991 | None:intergenic | 15.0% |
| !! | AAAACTTAAATTAACTAACT+AGG | + | chr8_2:18712497-18712516 | None:intergenic | 15.0% |
| !! | TAATTGCATACATATATGAA+AGG | + | chr8_2:18707553-18707572 | None:intergenic | 20.0% |
| !!! | ATTGTATTAGAAAGTGATTT+TGG | - | chr8_2:18708360-18708379 | Msa1238440:intron | 20.0% |
| !! | AAGACAAAAAAATGATTACA+TGG | - | chr8_2:18708687-18708706 | Msa1238440:intron | 20.0% |
| !!! | TTTTTGAAAGATTACAAAGA+AGG | - | chr8_2:18709229-18709248 | Msa1238440:intron | 20.0% |
| !!! | GATGAATTTTCAAATACTTT+AGG | - | chr8_2:18709670-18709689 | Msa1238440:intron | 20.0% |
| !! | TGGAGATAGAATATTAATTT+AGG | - | chr8_2:18709752-18709771 | Msa1238440:intron | 20.0% |
| !! | GGAGATAGAATATTAATTTA+GGG | - | chr8_2:18709753-18709772 | Msa1238440:intron | 20.0% |
| !!! | TCTAATGTGTTATTGTTAAA+TGG | - | chr8_2:18709908-18709927 | Msa1238440:intron | 20.0% |
| !!! | CTAATGTGTTATTGTTAAAT+GGG | - | chr8_2:18709909-18709928 | Msa1238440:intron | 20.0% |
| !!! | GCTTTTGAATAAATATTTGT+TGG | - | chr8_2:18710021-18710040 | Msa1238440:intron | 20.0% |
| !!! | GCATATATGTTATTTAACAA+GGG | + | chr8_2:18710112-18710131 | None:intergenic | 20.0% |
| !! | CTTGTTAAATAACATATATG+CGG | - | chr8_2:18710111-18710130 | Msa1238440:intron | 20.0% |
| !! | CTAATCAAAACAAAAAGAAA+AGG | + | chr8_2:18710381-18710400 | None:intergenic | 20.0% |
| !!! | AAGGGTATATTAGTAATTTT+GGG | + | chr8_2:18710621-18710640 | None:intergenic | 20.0% |
| !!! | AAAGGGTATATTAGTAATTT+TGG | + | chr8_2:18710622-18710641 | None:intergenic | 20.0% |
| !! | TTCGTTAGATGTTATTAATT+TGG | - | chr8_2:18711639-18711658 | Msa1238440:intron | 20.0% |
| !! | TAGAGAAAAACTTAGAAAAA+AGG | - | chr8_2:18711994-18712013 | Msa1238440:intron | 20.0% |
| !! | AGAGAAAAACTTAGAAAAAA+GGG | - | chr8_2:18711995-18712014 | Msa1238440:intron | 20.0% |
| !!! | ACTAGTAGTCAATTTTTTAA+GGG | + | chr8_2:18712068-18712087 | None:intergenic | 20.0% |
| !!! | AAATTTGCTTATAATAGTGA+CGG | + | chr8_2:18712210-18712229 | None:intergenic | 20.0% |
| !!! | AATATTCATACTGAAAGTTT+TGG | + | chr8_2:18712302-18712321 | None:intergenic | 20.0% |
| !!! | TTACGTAAAACTAACAATTT+TGG | - | chr8_2:18712590-18712609 | Msa1238440:intron | 20.0% |
| !! | AAAAGTAAAAAGTAATGTAG+TGG | + | chr8_2:18712976-18712995 | None:intergenic | 20.0% |
| !! | TTTGTTTGTTCAAAACAAAT+TGG | - | chr8_2:18713036-18713055 | Msa1238440:intron | 20.0% |
| ! | CTAATAAAGGAATTGGTTAT+GGG | - | chr8_2:18707648-18707667 | Msa1238440:intron | 25.0% |
| ! | CTAAAGAAGAAACACTTATA+GGG | + | chr8_2:18707814-18707833 | None:intergenic | 25.0% |
| ! | ACTAAAGAAGAAACACTTAT+AGG | + | chr8_2:18707815-18707834 | None:intergenic | 25.0% |
| ! | GAGTTCATCAAAATCAAATT+TGG | - | chr8_2:18707836-18707855 | Msa1238440:intron | 25.0% |
| ! | ATTTGGAAAACTTGATATCT+TGG | - | chr8_2:18707853-18707872 | Msa1238440:intron | 25.0% |
| !! | TATTGACTAACAAGTTAAGA+AGG | + | chr8_2:18707909-18707928 | None:intergenic | 25.0% |
| ! | ATTAAACGATGTTTATATGC+CGG | + | chr8_2:18708089-18708108 | None:intergenic | 25.0% |
| ! | AAACATCGTTTAATCTTGAT+CGG | - | chr8_2:18708095-18708114 | Msa1238440:intron | 25.0% |
| !!! | CATGAATTGTTCTGAAAAAT+CGG | - | chr8_2:18708422-18708441 | Msa1238440:intron | 25.0% |
| !! | AAATTTTAAATGGTAGAGGA+TGG | - | chr8_2:18708477-18708496 | Msa1238440:intron | 25.0% |
| !!! | TAAGTTTTAAATGGTAGAGT+TGG | - | chr8_2:18708542-18708561 | Msa1238440:intron | 25.0% |
| !!! | AAGTTTTAAATGGTAGAGTT+GGG | - | chr8_2:18708543-18708562 | Msa1238440:intron | 25.0% |
| ! | TCACAATTAAAACTTACTTG+AGG | + | chr8_2:18708599-18708618 | None:intergenic | 25.0% |
| !!! | CTGCAATCAAAAGATTTTTT+TGG | - | chr8_2:18708661-18708680 | Msa1238440:intron | 25.0% |
| !!! | TGGTATTGATTTGATTTTGT+AGG | - | chr8_2:18708707-18708726 | Msa1238440:intron | 25.0% |
| !!! | TTGATTTGATTTTGTAGGTA+AGG | - | chr8_2:18708712-18708731 | Msa1238440:intron | 25.0% |
| !!! | TGATTTGATTTTGTAGGTAA+GGG | - | chr8_2:18708713-18708732 | Msa1238440:intron | 25.0% |
| ! | GTTTATTTCAACACATTCTT+CGG | + | chr8_2:18708787-18708806 | None:intergenic | 25.0% |
| ! | TGTGTTGAAATAAACTTCTT+TGG | - | chr8_2:18708792-18708811 | Msa1238440:intron | 25.0% |
| ! | AACGTTACAAATGAAAAACT+TGG | - | chr8_2:18709190-18709209 | Msa1238440:intron | 25.0% |
| ! | GTAAAAAAAATAGACCAGAA+GGG | + | chr8_2:18709480-18709499 | None:intergenic | 25.0% |
| ! | TGTAAAAAAAATAGACCAGA+AGG | + | chr8_2:18709481-18709500 | None:intergenic | 25.0% |
| ! | TTAGGGACAAATTAAATTGA+TGG | + | chr8_2:18709530-18709549 | None:intergenic | 25.0% |
| ! | GTCTTGATATTAAGATGTTA+AGG | - | chr8_2:18709639-18709658 | Msa1238440:intron | 25.0% |
| ! | AGTACCAGAAACAATATAAT+AGG | + | chr8_2:18709827-18709846 | None:intergenic | 25.0% |
| ! | CAATGAAAAGTTACTATTCT+TGG | - | chr8_2:18710048-18710067 | Msa1238440:intron | 25.0% |
| !! | CGCATATATGTTATTTAACA+AGG | + | chr8_2:18710113-18710132 | None:intergenic | 25.0% |
| ! | AGAAAAAAGGACACTAATTA+AGG | + | chr8_2:18710482-18710501 | None:intergenic | 25.0% |
| ! | GTTAATAAGAGAGAGAAAAA+AGG | + | chr8_2:18710495-18710514 | None:intergenic | 25.0% |
| !!! | TTTTCTGAAAAATAGATGAC+AGG | - | chr8_2:18710551-18710570 | Msa1238440:intron | 25.0% |
| !! | AGGGTATATTAGTAATTTTG+GGG | + | chr8_2:18710620-18710639 | None:intergenic | 25.0% |
| !! | TGATTTAAGTTTACGTAGAA+GGG | + | chr8_2:18711008-18711027 | None:intergenic | 25.0% |
| !! | TTGATTTAAGTTTACGTAGA+AGG | + | chr8_2:18711009-18711028 | None:intergenic | 25.0% |
| !!! | ATTCAATTGACGATTTTAGT+AGG | - | chr8_2:18711199-18711218 | Msa1238440:CDS | 25.0% |
| ! | ATGGTTCAGAATGATAATAA+GGG | - | chr8_2:18711266-18711285 | Msa1238440:CDS | 25.0% |
| !!! | TTTTAGAAATCTAGATGAAG+AGG | - | chr8_2:18711290-18711309 | Msa1238440:CDS | 25.0% |
| ! | TTTAGAAATCTAGATGAAGA+GGG | - | chr8_2:18711291-18711310 | Msa1238440:CDS | 25.0% |
| ! | TAGGTGTAACTATGATTATA+TGG | - | chr8_2:18711349-18711368 | Msa1238440:intron | 25.0% |
| ! | AGGTGTAACTATGATTATAT+GGG | - | chr8_2:18711350-18711369 | Msa1238440:intron | 25.0% |
| !!! | TTTCTTTGTTCTTTTTTCTG+GGG | + | chr8_2:18711415-18711434 | None:intergenic | 25.0% |
| !!! | GTTTCTTTGTTCTTTTTTCT+GGG | + | chr8_2:18711416-18711435 | None:intergenic | 25.0% |
| !!! | TGTTTCTTTGTTCTTTTTTC+TGG | + | chr8_2:18711417-18711436 | None:intergenic | 25.0% |
| ! | ATCAAAATAAATCCTGTTGT+TGG | - | chr8_2:18711527-18711546 | Msa1238440:intron | 25.0% |
| !!! | ATCAGAGAGTATTAATTAGT+GGG | + | chr8_2:18711580-18711599 | None:intergenic | 25.0% |
| !!! | AATCAGAGAGTATTAATTAG+TGG | + | chr8_2:18711581-18711600 | None:intergenic | 25.0% |
| ! | CTTTATGAGATCGTTAAAAA+GGG | + | chr8_2:18711692-18711711 | None:intergenic | 25.0% |
| ! | TCTTTATGAGATCGTTAAAA+AGG | + | chr8_2:18711693-18711712 | None:intergenic | 25.0% |
| ! | AAAAGAACAAAGAAACAACA+TGG | + | chr8_2:18711908-18711927 | None:intergenic | 25.0% |
| !! | TGTTTCTTTGTTCTTTTTAC+TGG | - | chr8_2:18711911-18711930 | Msa1238440:intron | 25.0% |
| !! | GTTTCTTTGTTCTTTTTACT+GGG | - | chr8_2:18711912-18711931 | Msa1238440:intron | 25.0% |
| !! | TTTCTTTGTTCTTTTTACTG+GGG | - | chr8_2:18711913-18711932 | Msa1238440:intron | 25.0% |
| ! | GAGAAAAACTTAGAAAAAAG+GGG | - | chr8_2:18711996-18712015 | Msa1238440:intron | 25.0% |
| !!! | CACTAGTAGTCAATTTTTTA+AGG | + | chr8_2:18712069-18712088 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | - | chr8_2:18712137-18712156 | Msa1238440:intron | 25.0% |
| ! | ATGTATGTGGTCTATATTAT+AGG | - | chr8_2:18712150-18712169 | Msa1238440:intron | 25.0% |
| !! | AATTTGCTTATAATAGTGAC+CGG | - | chr8_2:18712211-18712230 | Msa1238440:intron | 25.0% |
| ! | TTAAATCTTTGATATTCAGC+TGG | - | chr8_2:18712423-18712442 | Msa1238440:intron | 25.0% |
| ! | ATGATAGTACTACTAACTAA+TGG | + | chr8_2:18712568-18712587 | None:intergenic | 25.0% |
| ! | ATATGCATGACAATAGAAAT+GGG | - | chr8_2:18712615-18712634 | Msa1238440:intron | 25.0% |
| ! | TGATGGAAGAAATATGTAAA+AGG | + | chr8_2:18712832-18712851 | None:intergenic | 25.0% |
| !! | AATTCTAGAAAGATTGGAAA+GGG | + | chr8_2:18712933-18712952 | None:intergenic | 25.0% |
| !! | AAATTCTAGAAAGATTGGAA+AGG | + | chr8_2:18712934-18712953 | None:intergenic | 25.0% |
| ! | CAAACAAATATCACATCATA+TGG | + | chr8_2:18713024-18713043 | None:intergenic | 25.0% |
| AAAAAAGAGGCTAAGGAAAA+TGG | + | chr8_2:18707520-18707539 | None:intergenic | 30.0% | |
| TAACAACAAGCTTGATCATA+AGG | - | chr8_2:18707571-18707590 | Msa1238440:intron | 30.0% | |
| ! | ACCTTGTTAATCTTGTTTCT+AGG | - | chr8_2:18707606-18707625 | Msa1238440:intron | 30.0% |
| ACCTAGAAACAAGATTAACA+AGG | + | chr8_2:18707610-18707629 | None:intergenic | 30.0% | |
| GCTAATAAAGGAATTGGTTA+TGG | - | chr8_2:18707647-18707666 | Msa1238440:intron | 30.0% | |
| TTATGGGATATGCAAGAAAT+TGG | - | chr8_2:18707664-18707683 | Msa1238440:intron | 30.0% | |
| GTAGAAAGTTTGAAAGAGTT+AGG | - | chr8_2:18707746-18707765 | Msa1238440:intron | 30.0% | |
| TGGAGAGAATGTTGTTAAAA+AGG | - | chr8_2:18707999-18708018 | Msa1238440:intron | 30.0% | |
| !! | AATTGTTCTGAAAAATCGGA+AGG | - | chr8_2:18708426-18708445 | Msa1238440:intron | 30.0% |
| !! | GATTTGATTTTGTAGGTAAG+GGG | - | chr8_2:18708714-18708733 | Msa1238440:intron | 30.0% |
| !! | GAGCATTGGAAACAAAAAAT+TGG | - | chr8_2:18709251-18709270 | Msa1238440:intron | 30.0% |
| !! | ATTTGTTTCTGGTTACACAA+TGG | - | chr8_2:18709279-18709298 | Msa1238440:intron | 30.0% |
| !! | CAGCTTTAAATTCTTACACA+AGG | - | chr8_2:18709308-18709327 | Msa1238440:intron | 30.0% |
| TATCAGTCTTAACAAAGTCA+GGG | + | chr8_2:18709378-18709397 | None:intergenic | 30.0% | |
| ATATCAGTCTTAACAAAGTC+AGG | + | chr8_2:18709379-18709398 | None:intergenic | 30.0% | |
| ACTGATATTAACGAGATGAA+AGG | - | chr8_2:18709391-18709410 | Msa1238440:intron | 30.0% | |
| CTGATATTAACGAGATGAAA+GGG | - | chr8_2:18709392-18709411 | Msa1238440:intron | 30.0% | |
| TTAGAGAGAGTGATGATTTA+GGG | + | chr8_2:18709547-18709566 | None:intergenic | 30.0% | |
| ATTAGAGAGAGTGATGATTT+AGG | + | chr8_2:18709548-18709567 | None:intergenic | 30.0% | |
| AATATAATAGGCCACAAGTA+GGG | + | chr8_2:18709815-18709834 | None:intergenic | 30.0% | |
| !!! | GGTTTTGATTCAAGAGATAA+AGG | - | chr8_2:18710132-18710151 | Msa1238440:intron | 30.0% |
| GCAGATTTCATTGTTAAGTT+AGG | - | chr8_2:18710214-18710233 | Msa1238440:intron | 30.0% | |
| TGATAGAGAAAAACTTAGAG+AGG | + | chr8_2:18710517-18710536 | None:intergenic | 30.0% | |
| ACTACAACTATAAACATCCA+TGG | - | chr8_2:18711062-18711081 | Msa1238440:intron | 30.0% | |
| ! | CGATGTTGTTAATTTTACCA+TGG | + | chr8_2:18711082-18711101 | None:intergenic | 30.0% |
| ATTAATCGAGTACGTATCAA+TGG | - | chr8_2:18711165-18711184 | Msa1238440:CDS | 30.0% | |
| GATGGTTCAGAATGATAATA+AGG | - | chr8_2:18711265-18711284 | Msa1238440:CDS | 30.0% | |
| GGTGTAACTATGATTATATG+GGG | - | chr8_2:18711351-18711370 | Msa1238440:intron | 30.0% | |
| GAAGAAAATGAAATAAGTCC+CGG | + | chr8_2:18711393-18711412 | None:intergenic | 30.0% | |
| AAAAGAACAAAGAAACACCA+TGG | - | chr8_2:18711420-18711439 | Msa1238440:intron | 30.0% | |
| ! | ATCAGAGTATTAATTCTCCA+TGG | + | chr8_2:18711440-18711459 | None:intergenic | 30.0% |
| AAAATAAATCCTGTTGTTGG+CGG | - | chr8_2:18711530-18711549 | Msa1238440:intron | 30.0% | |
| AATTAATACTCTCTGATTCC+TGG | - | chr8_2:18711583-18711602 | Msa1238440:intron | 30.0% | |
| TCTATTAAGTGTGATTAACG+TGG | + | chr8_2:18711866-18711885 | None:intergenic | 30.0% | |
| !! | TTTTCTGGAAAATAGATGAC+AGG | + | chr8_2:18711957-18711976 | None:intergenic | 30.0% |
| GATATGCATGACAATAGAAA+TGG | - | chr8_2:18712614-18712633 | Msa1238440:intron | 30.0% | |
| AAAAACACTCTCTCATATCT+TGG | - | chr8_2:18712721-18712740 | Msa1238440:CDS | 30.0% | |
| AAGATTGGAAAGGGTAAAAT+TGG | + | chr8_2:18712924-18712943 | None:intergenic | 30.0% | |
| ! | TCTGGAAATTCTAGAAAGAT+TGG | + | chr8_2:18712939-18712958 | None:intergenic | 30.0% |
| CTTGAAGAAAAAAGAGGCTA+AGG | + | chr8_2:18707527-18707546 | None:intergenic | 35.0% | |
| !!! | CTTAGCCTCTTTTTTCTTCA+AGG | - | chr8_2:18707525-18707544 | Msa1238440:CDS | 35.0% |
| AGGTACCTTGAAGAAAAAAG+AGG | + | chr8_2:18707533-18707552 | None:intergenic | 35.0% | |
| GTTGTAACAGGAGCTAATAA+AGG | - | chr8_2:18707635-18707654 | Msa1238440:intron | 35.0% | |
| ACAGGAGCTAATAAAGGAAT+TGG | - | chr8_2:18707641-18707660 | Msa1238440:intron | 35.0% | |
| ACTGCTAGAAATGAGAAAAG+AGG | - | chr8_2:18707713-18707732 | Msa1238440:intron | 35.0% | |
| GAAAAACCACAAAGTCAGAA+AGG | + | chr8_2:18707772-18707791 | None:intergenic | 35.0% | |
| TGGAAAACTTGATATCTTGG+TGG | - | chr8_2:18707856-18707875 | Msa1238440:intron | 35.0% | |
| GGAAAACTTGATATCTTGGT+GGG | - | chr8_2:18707857-18707876 | Msa1238440:intron | 35.0% | |
| ATCGTTTAATCTTGATCGGA+CGG | - | chr8_2:18708099-18708118 | Msa1238440:intron | 35.0% | |
| GTTATCAAATCCAACCAAGA+TGG | - | chr8_2:18708193-18708212 | Msa1238440:intron | 35.0% | |
| ATAACTTGAGCTCAATCACT+TGG | + | chr8_2:18708392-18708411 | None:intergenic | 35.0% | |
| TAAGGGGTGAAATATCAGAT+TGG | - | chr8_2:18708730-18708749 | Msa1238440:intron | 35.0% | |
| TGAAGTAGATAGTTGGAGAA+GGG | + | chr8_2:18708847-18708866 | None:intergenic | 35.0% | |
| CAATTGTGTCAATATCGTGT+CGG | - | chr8_2:18709042-18709061 | Msa1238440:intron | 35.0% | |
| CTCATTTGGCATAAACTGAA+AGG | + | chr8_2:18709140-18709159 | None:intergenic | 35.0% | |
| TTCAGTTTATGCCAAATGAG+TGG | - | chr8_2:18709140-18709159 | Msa1238440:intron | 35.0% | |
| TCAGTTTATGCCAAATGAGT+GGG | - | chr8_2:18709141-18709160 | Msa1238440:intron | 35.0% | |
| ! | AGATTACAAAGAAGGAGCAT+TGG | - | chr8_2:18709237-18709256 | Msa1238440:intron | 35.0% |
| AATTGGCCAACATTTGTTTC+TGG | - | chr8_2:18709268-18709287 | Msa1238440:intron | 35.0% | |
| GTGTAACCAGAAACAAATGT+TGG | + | chr8_2:18709277-18709296 | None:intergenic | 35.0% | |
| !!! | GGGTTTTTAAGCATTGATGA+AGG | - | chr8_2:18709412-18709431 | Msa1238440:intron | 35.0% |
| CAATATAATAGGCCACAAGT+AGG | + | chr8_2:18709816-18709835 | None:intergenic | 35.0% | |
| GTGGCCTATTATATTGTTTC+TGG | - | chr8_2:18709820-18709839 | Msa1238440:intron | 35.0% | |
| TCAAAGTAGCAACTTTGACT+TGG | - | chr8_2:18709970-18709989 | Msa1238440:intron | 35.0% | |
| GTGCAATATTGCACATGTTA+AGG | + | chr8_2:18710083-18710102 | None:intergenic | 35.0% | |
| ! | TGTTTGTTACACTCTTCACA+AGG | - | chr8_2:18710180-18710199 | Msa1238440:intron | 35.0% |
| TAAGAATCCGATATTCGAAG+AGG | + | chr8_2:18710242-18710261 | None:intergenic | 35.0% | |
| GGTGTATCTTGGATTATTTG+GGG | + | chr8_2:18710599-18710618 | None:intergenic | 35.0% | |
| GGGTGTATCTTGGATTATTT+GGG | + | chr8_2:18710600-18710619 | None:intergenic | 35.0% | |
| !!! | AGTAATTTTGGGGTGTATCT+TGG | + | chr8_2:18710610-18710629 | None:intergenic | 35.0% |
| GTGCAGTGAACATGAATAAA+GGG | + | chr8_2:18710639-18710658 | None:intergenic | 35.0% | |
| TGTGCAGTGAACATGAATAA+AGG | + | chr8_2:18710640-18710659 | None:intergenic | 35.0% | |
| ACACCAAGTAAACTGAGTTT+AGG | - | chr8_2:18710906-18710925 | Msa1238440:intron | 35.0% | |
| ACACCTAAACTCAGTTTACT+TGG | + | chr8_2:18710912-18710931 | None:intergenic | 35.0% | |
| !! | AGGTATTGATTGCATATCCA+TGG | - | chr8_2:18711219-18711238 | Msa1238440:CDS | 35.0% |
| ! | TATTGATTGCATATCCATGG+TGG | - | chr8_2:18711222-18711241 | Msa1238440:CDS | 35.0% |
| ! | TTGCTTATAATAGTGACGGA+AGG | + | chr8_2:18712099-18712118 | None:intergenic | 35.0% |
| ACATAAACTAATACTCCCTC+CGG | + | chr8_2:18712233-18712252 | None:intergenic | 35.0% | |
| ATCGGACGATTAAAACATGA+TGG | + | chr8_2:18712849-18712868 | None:intergenic | 35.0% | |
| !!! | TCATGTTTTAATCGTCCGAT+TGG | - | chr8_2:18712849-18712868 | Msa1238440:CDS | 35.0% |
| ! | TTTTAATCGTCCGATTGGAT+TGG | - | chr8_2:18712854-18712873 | Msa1238440:CDS | 35.0% |
| ! | TCCGATTGGATTGGAATTTA+TGG | - | chr8_2:18712863-18712882 | Msa1238440:CDS | 35.0% |
| GCCATAAATTCCAATCCAAT+CGG | + | chr8_2:18712867-18712886 | None:intergenic | 35.0% | |
| GATTGGAATTTATGGCATGT+CGG | - | chr8_2:18712871-18712890 | Msa1238440:CDS | 35.0% | |
| GTGGCGAACTATATTAAATC+TGG | + | chr8_2:18712957-18712976 | None:intergenic | 35.0% | |
| AACACACATATTCATCACAC+TGG | + | chr8_2:18712999-18713018 | None:intergenic | 35.0% | |
| TCTAGGTATGCAGTTGTAAC+AGG | - | chr8_2:18707623-18707642 | Msa1238440:intron | 40.0% | |
| ! | TGCAAGAAATTGGCTTCAAG+AGG | - | chr8_2:18707674-18707693 | Msa1238440:intron | 40.0% |
| !! | ATTGGCTTCAAGAGGTGTTA+TGG | - | chr8_2:18707682-18707701 | Msa1238440:intron | 40.0% |
| ! | TTTGGAATCATTGGTACCGT+AGG | - | chr8_2:18707942-18707961 | Msa1238440:intron | 40.0% |
| ! | AAAGATGACTTGCACCATCT+TGG | + | chr8_2:18708210-18708229 | None:intergenic | 40.0% |
| GAAGTAGATAGTTGGAGAAG+GGG | + | chr8_2:18708846-18708865 | None:intergenic | 40.0% | |
| GTGAAGTAGATAGTTGGAGA+AGG | + | chr8_2:18708848-18708867 | None:intergenic | 40.0% | |
| ! | CTTGAATTTTCCACGTCTAG+AGG | + | chr8_2:18708889-18708908 | None:intergenic | 40.0% |
| CTCTAGACGTGGAAAATTCA+AGG | - | chr8_2:18708887-18708906 | Msa1238440:intron | 40.0% | |
| CGACACGATATTGACACAAT+TGG | + | chr8_2:18709044-18709063 | None:intergenic | 40.0% | |
| ACGTCTTCAATCTCAAGTGT+CGG | - | chr8_2:18709080-18709099 | Msa1238440:intron | 40.0% | |
| CACAATTTATGCGGAAACGA+GGG | + | chr8_2:18709351-18709370 | None:intergenic | 40.0% | |
| ACACAATTTATGCGGAAACG+AGG | + | chr8_2:18709352-18709371 | None:intergenic | 40.0% | |
| CAGGGCATACACAATTTATG+CGG | + | chr8_2:18709360-18709379 | None:intergenic | 40.0% | |
| TTAGGAGCCTCTTCGAATAT+CGG | - | chr8_2:18710232-18710251 | Msa1238440:intron | 40.0% | |
| GTTACGATCAATGTGCACAT+CGG | + | chr8_2:18710435-18710454 | None:intergenic | 40.0% | |
| ! | TCTTGGATTATTTGGGGTGT+GGG | + | chr8_2:18710593-18710612 | None:intergenic | 40.0% |
| ! | ATCTTGGATTATTTGGGGTG+TGG | + | chr8_2:18710594-18710613 | None:intergenic | 40.0% |
| GGGGTGTATCTTGGATTATT+TGG | + | chr8_2:18710601-18710620 | None:intergenic | 40.0% | |
| ! | CTAGATGAAGAGGGCAATTT+TGG | - | chr8_2:18711300-18711319 | Msa1238440:CDS | 40.0% |
| GGGTGAAACTAGAAAAAGTC+CGG | - | chr8_2:18711371-18711390 | Msa1238440:intron | 40.0% | |
| GGTGAAACTAGAAAAAGTCC+GGG | - | chr8_2:18711372-18711391 | Msa1238440:intron | 40.0% | |
| ATTCCTGGAGTAGCAAAAAG+AGG | - | chr8_2:18711598-18711617 | Msa1238440:intron | 40.0% | |
| GAGATCGTTAAAAAGGGTGA+TGG | + | chr8_2:18711686-18711705 | None:intergenic | 40.0% | |
| ! | ATAATAGTGACGGAAGGAGT+AGG | + | chr8_2:18712093-18712112 | None:intergenic | 40.0% |
| TTGCTTATAATAGTGACCGG+AGG | - | chr8_2:18712214-18712233 | Msa1238440:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr8_2:18712215-18712234 | Msa1238440:intron | 40.0% | |
| TGCATGACAATAGAAATGGG+TGG | - | chr8_2:18712618-18712637 | Msa1238440:intron | 40.0% | |
| GCATGACAATAGAAATGGGT+GGG | - | chr8_2:18712619-18712638 | Msa1238440:intron | 40.0% | |
| !! | AATGGGTGGGCTAAGTTATA+TGG | - | chr8_2:18712632-18712651 | Msa1238440:intron | 40.0% |
| AATTTATGGCATGTCGGCAT+AGG | - | chr8_2:18712877-18712896 | Msa1238440:CDS | 40.0% | |
| GTTAGGCCTTTCTGACTTTG+TGG | - | chr8_2:18707763-18707782 | Msa1238440:intron | 45.0% | |
| ACACCAGCATTGTTCACCTA+CGG | + | chr8_2:18707961-18707980 | None:intergenic | 45.0% | |
| GTTGCTGGAGGAATAGTGAA+TGG | - | chr8_2:18707979-18707998 | Msa1238440:intron | 45.0% | |
| CTTCCATGCATTCTTGTTGC+CGG | - | chr8_2:18708067-18708086 | Msa1238440:intron | 45.0% | |
| ! | ATGACTTGCACCATCTTGGT+TGG | + | chr8_2:18708206-18708225 | None:intergenic | 45.0% |
| TCCAACTATCTACTTCACCC+AGG | - | chr8_2:18708850-18708869 | Msa1238440:intron | 45.0% | |
| TCCTGGGTGAAGTAGATAGT+TGG | + | chr8_2:18708854-18708873 | None:intergenic | 45.0% | |
| GAGGAGACATTGACAATCCT+GGG | + | chr8_2:18708870-18708889 | None:intergenic | 45.0% | |
| AGAGGAGACATTGACAATCC+TGG | + | chr8_2:18708871-18708890 | None:intergenic | 45.0% | |
| ! | TGTCAATATCGTGTCGGTGT+CGG | - | chr8_2:18709048-18709067 | Msa1238440:intron | 45.0% |
| GGCAACAATGCTAGATTCAC+AGG | + | chr8_2:18709448-18709467 | None:intergenic | 45.0% | |
| CTAGCATTGTTGCCAGATGA+TGG | - | chr8_2:18709454-18709473 | Msa1238440:intron | 45.0% | |
| ATAATAGGCCACAAGTAGGG+CGG | + | chr8_2:18709812-18709831 | None:intergenic | 45.0% | |
| ! | GCATCTCCTCTAGTTTGATG+CGG | - | chr8_2:18710301-18710320 | Msa1238440:intron | 45.0% |
| TTCCAACCGCATCAAACTAG+AGG | + | chr8_2:18710310-18710329 | None:intergenic | 45.0% | |
| TGCATATCCATGGTGGTTTG+TGG | - | chr8_2:18711229-18711248 | Msa1238440:CDS | 45.0% | |
| ! | GCATATCCATGGTGGTTTGT+GGG | - | chr8_2:18711230-18711249 | Msa1238440:CDS | 45.0% |
| ! | TTTTCACCCACAAACCACCA+TGG | + | chr8_2:18711239-18711258 | None:intergenic | 45.0% |
| ! | TGGTGGTTTGTGGGTGAAAA+AGG | - | chr8_2:18711239-18711258 | Msa1238440:CDS | 45.0% |
| ! | GGTGGTTTGTGGGTGAAAAA+GGG | - | chr8_2:18711240-18711259 | Msa1238440:CDS | 45.0% |
| ! | GTGGTTTGTGGGTGAAAAAG+GGG | - | chr8_2:18711241-18711260 | Msa1238440:CDS | 45.0% |
| ATTGAATCACCGCCAACAAC+AGG | + | chr8_2:18711542-18711561 | None:intergenic | 45.0% | |
| ! | TCTCCTCTTTTTGCTACTCC+AGG | + | chr8_2:18711604-18711623 | None:intergenic | 45.0% |
| GAGTCATAAGCTCCCAAACA+GGG | - | chr8_2:18711795-18711814 | Msa1238440:CDS | 45.0% | |
| ATAAGCTCCCAAACAGGGTT+GGG | - | chr8_2:18711800-18711819 | Msa1238440:CDS | 45.0% | |
| GATTGATCCCAACCCTGTTT+GGG | + | chr8_2:18711810-18711829 | None:intergenic | 45.0% | |
| AGATTGATCCCAACCCTGTT+TGG | + | chr8_2:18711811-18711830 | None:intergenic | 45.0% | |
| TAAGCTGTGCAAGATTGCAC+AGG | - | chr8_2:18712033-18712052 | Msa1238440:intron | 45.0% | |
| ! | TCGGCATAGGTTGGAACTTA+GGG | - | chr8_2:18712890-18712909 | Msa1238440:CDS | 45.0% |
| !! | TTTAAATAAATTTAAAAAGT+AGG | - | chr8_2:18708158-18708177 | Msa1238440:intron | 5.0% |
| !!! | TTATCATTTTTATATATTTA+AGG | - | chr8_2:18709722-18709741 | Msa1238440:intron | 5.0% |
| !!! | GTAAAAATTTTAATAAATTT+AGG | - | chr8_2:18711330-18711349 | Msa1238440:intron | 5.0% |
| !!! | ATATAATTTTTTCTAATTTT+TGG | + | chr8_2:18712355-18712374 | None:intergenic | 5.0% |
| !!! | ATTTTATCTTTTAAATTTTT+TGG | - | chr8_2:18712541-18712560 | Msa1238440:CDS | 5.0% |
| GTACCGTAGGTGAACAATGC+TGG | - | chr8_2:18707955-18707974 | Msa1238440:intron | 50.0% | |
| !! | GTGAACAATGCTGGTGTTGC+TGG | - | chr8_2:18707964-18707983 | Msa1238440:intron | 50.0% |
| !! | AACAATGCTGGTGTTGCTGG+AGG | - | chr8_2:18707967-18707986 | Msa1238440:intron | 50.0% |
| ATGCCGGCAACAAGAATGCA+TGG | + | chr8_2:18708073-18708092 | None:intergenic | 50.0% | |
| GTCAATGTCTCCTCTAGACG+TGG | - | chr8_2:18708876-18708895 | Msa1238440:intron | 50.0% | |
| GAGAGAGAGAGAGAGAGATG+TGG | + | chr8_2:18708924-18708943 | None:intergenic | 50.0% | |
| CTCTCTCTCTCTCTCTCTCA+CGG | - | chr8_2:18708947-18708966 | Msa1238440:intron | 50.0% | |
| CTCTCTCTCTCTCACGGTAT+TGG | - | chr8_2:18708953-18708972 | Msa1238440:intron | 50.0% | |
| ATGCCAAATGAGTGGGCAAG+AGG | - | chr8_2:18709148-18709167 | Msa1238440:intron | 50.0% | |
| ACTCCTCTTGCCCACTCATT+TGG | + | chr8_2:18709154-18709173 | None:intergenic | 50.0% | |
| TCATATGACCGCCCTACTTG+TGG | - | chr8_2:18709801-18709820 | Msa1238440:intron | 50.0% | |
| AGATGCAGCAAGTCATCTGG+AGG | + | chr8_2:18710287-18710306 | None:intergenic | 50.0% | |
| AGGAGATGCAGCAAGTCATC+TGG | + | chr8_2:18710290-18710309 | None:intergenic | 50.0% | |
| ! | CTCCTCTAGTTTGATGCGGT+TGG | - | chr8_2:18710305-18710324 | Msa1238440:intron | 50.0% |
| TGTGGGTGAAAAAGGGGTGA+TGG | - | chr8_2:18711247-18711266 | Msa1238440:CDS | 50.0% | |
| GTTTGGGAGCTTATGACTCG+AGG | + | chr8_2:18711794-18711813 | None:intergenic | 50.0% | |
| CGAGTCATAAGCTCCCAAAC+AGG | - | chr8_2:18711794-18711813 | Msa1238440:CDS | 50.0% | |
| CATAAGCTCCCAAACAGGGT+TGG | - | chr8_2:18711799-18711818 | Msa1238440:CDS | 50.0% | |
| TATGGCATGTCGGCATAGGT+TGG | - | chr8_2:18712881-18712900 | Msa1238440:CDS | 50.0% | |
| ! | GTCGGCATAGGTTGGAACTT+AGG | - | chr8_2:18712889-18712908 | Msa1238440:CDS | 50.0% |
| CTGACACGTTGACACACTGC+CGG | - | chr8_2:18708984-18709003 | Msa1238440:intron | 55.0% | |
| ! | TTGCCAGATGATGGCCCTTC+TGG | - | chr8_2:18709463-18709482 | Msa1238440:intron | 55.0% |
| AGACCAGAAGGGCCATCATC+TGG | + | chr8_2:18709469-18709488 | None:intergenic | 55.0% | |
| CAGCAAGTCATCTGGAGGAG+AGG | + | chr8_2:18710282-18710301 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 18707489 | 18713068 | 18707489 | ID=Msa1238440;Name=Msa1238440 |
| chr8_2 | mRNA | 18707489 | 18713068 | 18707489 | ID=Msa1238440-mRNA-1;Parent=Msa1238440;Name=Msa1238440-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0|0|0.71|1|1|7|0|265 |
| chr8_2 | exon | 18713049 | 18713068 | 18713049 | ID=Msa1238440-mRNA-1:exon:7017;Parent=Msa1238440-mRNA-1 |
| chr8_2 | exon | 18712683 | 18712929 | 18712683 | ID=Msa1238440-mRNA-1:exon:7016;Parent=Msa1238440-mRNA-1 |
| chr8_2 | exon | 18712537 | 18712593 | 18712537 | ID=Msa1238440-mRNA-1:exon:7015;Parent=Msa1238440-mRNA-1 |
| chr8_2 | exon | 18711993 | 18711998 | 18711993 | ID=Msa1238440-mRNA-1:exon:7014;Parent=Msa1238440-mRNA-1 |
| chr8_2 | exon | 18711649 | 18711828 | 18711649 | ID=Msa1238440-mRNA-1:exon:7013;Parent=Msa1238440-mRNA-1 |
| chr8_2 | exon | 18711110 | 18711328 | 18711110 | ID=Msa1238440-mRNA-1:exon:7012;Parent=Msa1238440-mRNA-1 |
| chr8_2 | exon | 18707489 | 18707557 | 18707489 | ID=Msa1238440-mRNA-1:exon:7011;Parent=Msa1238440-mRNA-1 |
| chr8_2 | CDS | 18713049 | 18713068 | 18713049 | ID=Msa1238440-mRNA-1:cds;Parent=Msa1238440-mRNA-1 |
| chr8_2 | CDS | 18712683 | 18712929 | 18712683 | ID=Msa1238440-mRNA-1:cds;Parent=Msa1238440-mRNA-1 |
| chr8_2 | CDS | 18712537 | 18712593 | 18712537 | ID=Msa1238440-mRNA-1:cds;Parent=Msa1238440-mRNA-1 |
| chr8_2 | CDS | 18711993 | 18711998 | 18711993 | ID=Msa1238440-mRNA-1:cds;Parent=Msa1238440-mRNA-1 |
| chr8_2 | CDS | 18711649 | 18711828 | 18711649 | ID=Msa1238440-mRNA-1:cds;Parent=Msa1238440-mRNA-1 |
| chr8_2 | CDS | 18711110 | 18711328 | 18711110 | ID=Msa1238440-mRNA-1:cds;Parent=Msa1238440-mRNA-1 |
| chr8_2 | CDS | 18707489 | 18707557 | 18707489 | ID=Msa1238440-mRNA-1:cds;Parent=Msa1238440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
