Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270010 | sp|Q9M2E2|SDR1_ARATH | 54.392 | 296 | 132 | 3 | 1 | 293 | 1 | 296 | 5.58e-113 | 331 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270010 | G7LBT1 | 96.928 | 293 | 9 | 0 | 1 | 293 | 1 | 293 | 0.0 | 583 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0074620 | Msa1270010 | 0.806082 | 9.777407e-50 | -8.615850e-47 |
| Msa0640290 | Msa1270010 | 0.820913 | 5.335446e-53 | -8.615850e-47 |
| Msa0643840 | Msa1270010 | 0.811851 | 5.694106e-51 | -8.615850e-47 |
| Msa0768670 | Msa1270010 | 0.813105 | 3.029064e-51 | -8.615850e-47 |
| Msa0777250 | Msa1270010 | 0.800147 | 1.651744e-48 | -8.615850e-47 |
| Msa0814230 | Msa1270010 | 0.808662 | 2.774343e-50 | -8.615850e-47 |
| Msa0163340 | Msa1270010 | 0.813046 | 3.120031e-51 | -8.615850e-47 |
| Msa1238440 | Msa1270010 | 0.879250 | 1.452545e-69 | -8.615850e-47 |
| Msa1270010 | Msa1319290 | 0.887861 | 9.835315e-73 | -8.615850e-47 |
| Msa1270010 | Msa1323120 | 0.803835 | 2.883640e-49 | -8.615850e-47 |
| Msa1270010 | Msa1411550 | 0.815693 | 8.109903e-52 | -8.615850e-47 |
| Msa1270010 | Msa1459610 | 0.800589 | 1.342421e-48 | -8.615850e-47 |
| Msa0481410 | Msa1270010 | 0.819129 | 1.366023e-52 | -8.615850e-47 |
| Msa0993450 | Msa1270010 | 0.808189 | 3.499457e-50 | -8.615850e-47 |
| Msa1021620 | Msa1270010 | 0.804429 | 2.169921e-49 | -8.615850e-47 |
| Msa1061670 | Msa1270010 | 0.827593 | 1.435913e-54 | -8.615850e-47 |
| Msa1064940 | Msa1270010 | 0.812383 | 4.358981e-51 | -8.615850e-47 |
| Msa1076830 | Msa1270010 | 0.800388 | 1.475306e-48 | -8.615850e-47 |
| Msa1106680 | Msa1270010 | 0.800304 | 1.534478e-48 | -8.615850e-47 |
| Msa1106960 | Msa1270010 | 0.823854 | 1.106631e-53 | -8.615850e-47 |
| Msa0535570 | Msa1270010 | 0.808392 | 3.167438e-50 | -8.615850e-47 |
| Msa0543740 | Msa1270010 | 0.824856 | 6.433394e-54 | -8.615850e-47 |
| Msa0554660 | Msa1270010 | 0.810348 | 1.205191e-50 | -8.615850e-47 |
| Msa0599600 | Msa1270010 | 0.802273 | 6.066483e-49 | -8.615850e-47 |
| Msa0896920 | Msa1270010 | 0.818736 | 1.678041e-52 | -8.615850e-47 |
| Msa0913550 | Msa1270010 | 0.810527 | 1.102904e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270010 | MtrunA17_Chr8g0349721 | 96.928 | 293 | 9 | 0 | 1 | 293 | 1 | 293 | 0.0 | 583 |
| Msa1270010 | MtrunA17_Chr8g0349701 | 96.587 | 293 | 10 | 0 | 1 | 293 | 1 | 293 | 0.0 | 581 |
| Msa1270010 | MtrunA17_Chr7g0247041 | 67.128 | 289 | 93 | 2 | 7 | 293 | 6 | 294 | 1.22e-133 | 380 |
| Msa1270010 | MtrunA17_Chr8g0349801 | 56.376 | 298 | 125 | 2 | 1 | 293 | 1 | 298 | 7.33e-120 | 345 |
| Msa1270010 | MtrunA17_Chr8g0349811 | 55.705 | 298 | 127 | 2 | 1 | 293 | 1 | 298 | 1.70e-119 | 344 |
| Msa1270010 | MtrunA17_Chr8g0349851 | 55.184 | 299 | 128 | 2 | 1 | 293 | 1 | 299 | 1.80e-119 | 344 |
| Msa1270010 | MtrunA17_Chr8g0349781 | 55.705 | 298 | 127 | 2 | 1 | 293 | 1 | 298 | 1.28e-118 | 342 |
| Msa1270010 | MtrunA17_Chr7g0247011 | 55.973 | 293 | 122 | 3 | 1 | 293 | 1 | 286 | 1.33e-115 | 334 |
| Msa1270010 | MtrunA17_Chr8g0349831 | 56.229 | 297 | 124 | 3 | 3 | 293 | 4 | 300 | 8.39e-115 | 333 |
| Msa1270010 | MtrunA17_Chr8g0349641 | 55.593 | 295 | 124 | 3 | 1 | 289 | 1 | 294 | 3.12e-111 | 323 |
| Msa1270010 | MtrunA17_Chr8g0349671 | 56.463 | 294 | 122 | 4 | 1 | 289 | 1 | 293 | 4.71e-111 | 323 |
| Msa1270010 | MtrunA17_Chr8g0349741 | 54.762 | 294 | 125 | 4 | 1 | 293 | 1 | 287 | 1.59e-109 | 319 |
| Msa1270010 | MtrunA17_Chr8g0349761 | 54.296 | 291 | 128 | 2 | 7 | 292 | 8 | 298 | 2.43e-109 | 319 |
| Msa1270010 | MtrunA17_Chr8g0349751 | 53.846 | 299 | 132 | 3 | 1 | 293 | 51 | 349 | 2.49e-109 | 320 |
| Msa1270010 | MtrunA17_Chr8g0349771 | 52.685 | 298 | 136 | 2 | 1 | 293 | 1 | 298 | 2.96e-108 | 316 |
| Msa1270010 | MtrunA17_Chr7g0247031 | 54.671 | 289 | 121 | 5 | 7 | 293 | 8 | 288 | 2.97e-107 | 313 |
| Msa1270010 | MtrunA17_Chr5g0425391 | 52.703 | 296 | 136 | 2 | 1 | 293 | 1 | 295 | 2.34e-103 | 303 |
| Msa1270010 | MtrunA17_Chr3g0118511 | 48.485 | 297 | 142 | 4 | 7 | 293 | 3 | 298 | 2.97e-89 | 268 |
| Msa1270010 | MtrunA17_Chr8g0349651 | 51.136 | 264 | 122 | 4 | 31 | 289 | 10 | 271 | 1.11e-85 | 258 |
| Msa1270010 | MtrunA17_Chr7g0267881 | 46.429 | 252 | 103 | 3 | 7 | 250 | 9 | 236 | 5.50e-73 | 224 |
| Msa1270010 | MtrunA17_Chr3g0131521 | 37.838 | 296 | 152 | 5 | 9 | 293 | 37 | 311 | 3.08e-61 | 196 |
| Msa1270010 | MtrunA17_Chr1g0160511 | 36.486 | 296 | 156 | 5 | 9 | 293 | 42 | 316 | 2.38e-57 | 186 |
| Msa1270010 | MtrunA17_Chr5g0437701 | 63.934 | 122 | 44 | 0 | 172 | 293 | 7 | 128 | 1.04e-51 | 166 |
| Msa1270010 | MtrunA17_Chr8g0385581 | 33.446 | 296 | 168 | 5 | 9 | 293 | 39 | 316 | 3.09e-49 | 166 |
| Msa1270010 | MtrunA17_Chr4g0045691 | 32.544 | 169 | 98 | 5 | 131 | 286 | 1 | 166 | 4.67e-23 | 93.6 |
| Msa1270010 | MtrunA17_Chr4g0045711 | 50.575 | 87 | 38 | 3 | 9 | 90 | 24 | 110 | 5.54e-15 | 70.1 |
| Msa1270010 | MtrunA17_Chr6g0466681 | 30.380 | 158 | 81 | 3 | 10 | 162 | 70 | 203 | 2.32e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270010 | AT3G61220.1 | 54.392 | 296 | 132 | 3 | 1 | 293 | 1 | 296 | 5.68e-114 | 331 |
| Msa1270010 | AT3G61220.2 | 54.828 | 290 | 128 | 3 | 7 | 293 | 14 | 303 | 2.98e-112 | 327 |
| Msa1270010 | AT3G61220.3 | 54.828 | 290 | 128 | 3 | 7 | 293 | 38 | 327 | 1.10e-111 | 326 |
| Msa1270010 | AT2G24190.1 | 52.703 | 296 | 137 | 3 | 1 | 293 | 1 | 296 | 2.78e-109 | 319 |
| Msa1270010 | AT2G24190.2 | 52.759 | 290 | 134 | 3 | 7 | 293 | 12 | 301 | 3.18e-107 | 314 |
| Msa1270010 | AT1G01800.1 | 53.497 | 286 | 129 | 3 | 4 | 285 | 2 | 287 | 3.50e-104 | 306 |
| Msa1270010 | AT1G01800.2 | 51.515 | 198 | 94 | 1 | 90 | 285 | 55 | 252 | 1.21e-66 | 209 |
| Msa1270010 | AT5G51030.1 | 36.213 | 301 | 160 | 5 | 4 | 293 | 35 | 314 | 1.22e-58 | 190 |
| Msa1270010 | AT3G59710.1 | 37.943 | 282 | 150 | 7 | 9 | 286 | 31 | 291 | 1.68e-54 | 179 |
| Msa1270010 | AT3G59710.3 | 37.943 | 282 | 150 | 7 | 9 | 286 | 21 | 281 | 1.80e-54 | 179 |
| Msa1270010 | AT3G59710.2 | 37.943 | 282 | 150 | 7 | 9 | 286 | 50 | 310 | 5.64e-54 | 178 |
| Msa1270010 | AT5G61830.1 | 36.700 | 297 | 157 | 5 | 9 | 293 | 39 | 316 | 4.40e-51 | 171 |
| Msa1270010 | AT5G61830.2 | 36.700 | 297 | 157 | 5 | 9 | 293 | 39 | 316 | 4.40e-51 | 171 |
| Msa1270010 | AT5G50700.1 | 32.051 | 156 | 87 | 4 | 7 | 162 | 48 | 184 | 3.20e-12 | 66.6 |
| Msa1270010 | AT5G50600.1 | 32.051 | 156 | 87 | 4 | 7 | 162 | 48 | 184 | 3.20e-12 | 66.6 |
Find 53 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTGGCCAACATTTGTTTC+TGG | 0.189389 | 8_3:-3399717 | Msa1270010:CDS |
| TTATGGGATATGCAAGAAAT+TGG | 0.259442 | 8_3:-3401304 | Msa1270010:CDS |
| GAGTTCATCAAAATCAAATT+TGG | 0.260925 | 8_3:-3401132 | Msa1270010:CDS |
| ACTAAAGAAGAAACACTTAT+AGG | 0.263056 | 8_3:+3401156 | None:intergenic |
| TGGAGAGAATGTTGTTAAAA+AGG | 0.269327 | 8_3:-3400969 | Msa1270010:intron |
| ATTTGGAAAACTTGATATCT+TGG | 0.275930 | 8_3:-3401115 | Msa1270010:intron |
| TTGCCAGATGATGGCCCTTC+TGG | 0.284677 | 8_3:-3399522 | Msa1270010:CDS |
| GCTAATAAAGGAATTGGTTA+TGG | 0.301681 | 8_3:-3401321 | Msa1270010:CDS |
| GTGAACAATGCTGGTGTTGC+TGG | 0.318704 | 8_3:-3401004 | Msa1270010:CDS |
| TGTGTTGAAATAAACTTCTT+TGG | 0.327150 | 8_3:-3400177 | Msa1270010:CDS |
| TCTAGGTATGCAGTTGTAAC+AGG | 0.330059 | 8_3:-3401345 | Msa1270010:intron |
| ACTCCTCTTGCCCATTCATT+TGG | 0.361116 | 8_3:+3399834 | None:intergenic |
| CTAAAGAAGAAACACTTATA+GGG | 0.376231 | 8_3:+3401157 | None:intergenic |
| TTCAGTTTATGCCAAATGAA+TGG | 0.377340 | 8_3:-3399845 | Msa1270010:intron |
| GTTAGGCCTTTCTGACTTTG+TGG | 0.382164 | 8_3:-3401205 | Msa1270010:CDS |
| ATTGGCTTCAAGAGGTGTTA+TGG | 0.387557 | 8_3:-3401286 | Msa1270010:CDS |
| ATATCAGTCTTAACAAAGTC+AGG | 0.388627 | 8_3:+3399609 | None:intergenic |
| CAATGACAGAAGCATCAAAA+AGG | 0.391122 | 8_3:-3401481 | Msa1270010:intron |
| GTAGAAAGTTTGAAAGAGTT+AGG | 0.391428 | 8_3:-3401222 | Msa1270010:CDS |
| ACAGGAGCTAATAAAGGAAT+TGG | 0.406883 | 8_3:-3401327 | Msa1270010:CDS |
| GTTTATTTCAACACATTCTT+CGG | 0.435982 | 8_3:+3400185 | None:intergenic |
| CTCTAGACGTGGAAAATTCA+AGG | 0.435985 | 8_3:-3400082 | Msa1270010:intron |
| CTAATAAAGGAATTGGTTAT+GGG | 0.437393 | 8_3:-3401320 | Msa1270010:CDS |
| AGACCAGAAGGGCCATCATC+TGG | 0.442885 | 8_3:+3399519 | None:intergenic |
| TCAGTTTATGCCAAATGAAT+GGG | 0.447629 | 8_3:-3399844 | Msa1270010:intron |
| AGAGGAGACATTGACAATCC+TGG | 0.448062 | 8_3:+3400101 | None:intergenic |
| TGAAGTAGATAGTTGGAGAA+GGG | 0.484408 | 8_3:+3400125 | None:intergenic |
| CTGATATTAACGAGATGAAA+GGG | 0.496322 | 8_3:-3399593 | Msa1270010:CDS |
| GTTGTAACAGGAGCTAATAA+AGG | 0.502871 | 8_3:-3401333 | Msa1270010:CDS |
| ACTGCTAGAAATGAGAAAAG+AGG | 0.505341 | 8_3:-3401255 | Msa1270010:CDS |
| TCCTGGGTGAAGTAGATAGT+TGG | 0.511882 | 8_3:+3400118 | None:intergenic |
| TAAGGGGTGAAATATCTGAT+TGG | 0.521800 | 8_3:-3400239 | Msa1270010:CDS |
| GGCAACAATGCTAGATTCAC+AGG | 0.526880 | 8_3:+3399540 | None:intergenic |
| CTAGCATTGTTGCCAGATGA+TGG | 0.529228 | 8_3:-3399531 | Msa1270010:CDS |
| AGATTACAAAGAAGGAGCAT+TGG | 0.531996 | 8_3:-3399748 | Msa1270010:CDS |
| GAGGAGACATTGACAATCCT+GGG | 0.550899 | 8_3:+3400102 | None:intergenic |
| CAGCTTTAAATTCTTACACA+AGG | 0.553733 | 8_3:-3399677 | Msa1270010:CDS |
| GTGAAGTAGATAGTTGGAGA+AGG | 0.564346 | 8_3:+3400124 | None:intergenic |
| GAAGTAGATAGTTGGAGAAG+GGG | 0.573620 | 8_3:+3400126 | None:intergenic |
| ACTGATATTAACGAGATGAA+AGG | 0.577779 | 8_3:-3399594 | Msa1270010:CDS |
| GTACCGTAGGTGAACAATGC+TGG | 0.579073 | 8_3:-3401013 | Msa1270010:intron |
| TGCAAGAAATTGGCTTCAAG+AGG | 0.591172 | 8_3:-3401294 | Msa1270010:CDS |
| ATTTGTTTCTGGTTACACAA+TGG | 0.603998 | 8_3:-3399706 | Msa1270010:CDS |
| ATGCCAAATGAATGGGCAAG+AGG | 0.607172 | 8_3:-3399837 | Msa1270010:CDS |
| GTTGCTGGAGGAATAGTGAA+TGG | 0.611511 | 8_3:-3400989 | Msa1270010:CDS |
| CACAATTTATGCGGAAACGA+GGG | 0.612527 | 8_3:+3399637 | None:intergenic |
| ACACAATTTATGCGGAAACG+AGG | 0.622206 | 8_3:+3399636 | None:intergenic |
| TATCAGTCTTAACAAAGTCA+GGG | 0.628316 | 8_3:+3399610 | None:intergenic |
| TCCAACTATCTACTTCACCC+AGG | 0.646857 | 8_3:-3400119 | Msa1270010:CDS |
| GTGTAACCAGAAACAAATGT+TGG | 0.648385 | 8_3:+3399711 | None:intergenic |
| GTCAATGTCTCCTCTAGACG+TGG | 0.652586 | 8_3:-3400093 | Msa1270010:CDS |
| AACAATGCTGGTGTTGCTGG+AGG | 0.655043 | 8_3:-3401001 | Msa1270010:CDS |
| CAGGGCATACACAATTTATG+CGG | 0.694860 | 8_3:+3399628 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATAAAGTTTATTTATATT+TGG | - | chr8_3:3399917-3399936 | Msa1270010:intron | 10.0% |
| !!! | TTTGAGTAATAAATTTTAAA+TGG | - | chr8_3:3400459-3400478 | Msa1270010:intron | 10.0% |
| !!! | ATAAAGTTTTAAGTTTTAAA+TGG | - | chr8_3:3400525-3400544 | Msa1270010:intron | 10.0% |
| !! | CAATAAAGTTTATTTATATT+TGG | - | chr8_3:3399917-3399936 | Msa1270010:intron | 10.0% |
| !!! | TTTGAGTAATAAATTTTAAA+TGG | - | chr8_3:3400459-3400478 | Msa1270010:intron | 10.0% |
| !!! | ATAAAGTTTTAAGTTTTAAA+TGG | - | chr8_3:3400525-3400544 | Msa1270010:intron | 10.0% |
| !!! | TTATTTATATTTGGAATCAT+TGG | - | chr8_3:3399926-3399945 | Msa1270010:intron | 15.0% |
| !!! | TAATAAATTTTAAATGGTAG+AGG | - | chr8_3:3400465-3400484 | Msa1270010:intron | 15.0% |
| !!! | AAAACTTAAAACTTTATTTG+AGG | + | chr8_3:3400522-3400541 | None:intergenic | 15.0% |
| !! | TCAATAATATATATTTGTGT+TGG | - | chr8_3:3400558-3400577 | Msa1270010:intron | 15.0% |
| !!! | TTATTTATATTTGGAATCAT+TGG | - | chr8_3:3399926-3399945 | Msa1270010:intron | 15.0% |
| !!! | TAATAAATTTTAAATGGTAG+AGG | - | chr8_3:3400465-3400484 | Msa1270010:intron | 15.0% |
| !!! | AAAACTTAAAACTTTATTTG+AGG | + | chr8_3:3400522-3400541 | None:intergenic | 15.0% |
| !! | TCAATAATATATATTTGTGT+TGG | - | chr8_3:3400558-3400577 | Msa1270010:intron | 15.0% |
| !! | TAATTGCATACATATATGAA+AGG | + | chr8_3:3399546-3399565 | None:intergenic | 20.0% |
| !! | AAGACAAAAAAATGATTACA+TGG | - | chr8_3:3400679-3400698 | Msa1270010:intron | 20.0% |
| !! | AACGTTACAAATGAAAAATT+TGG | - | chr8_3:3401166-3401185 | Msa1270010:CDS | 20.0% |
| !!! | TTTTTGAAAGATTACAAAGA+AGG | - | chr8_3:3401205-3401224 | Msa1270010:CDS | 20.0% |
| !! | TAATTGCATACATATATGAA+AGG | + | chr8_3:3399546-3399565 | None:intergenic | 20.0% |
| !! | AAGACAAAAAAATGATTACA+TGG | - | chr8_3:3400679-3400698 | Msa1270010:intron | 20.0% |
| !! | AACGTTACAAATGAAAAATT+TGG | - | chr8_3:3401166-3401185 | Msa1270010:CDS | 20.0% |
| !!! | TTTTTGAAAGATTACAAAGA+AGG | - | chr8_3:3401205-3401224 | Msa1270010:CDS | 20.0% |
| ! | CTAATAAAGGAATTGGTTAT+GGG | - | chr8_3:3399641-3399660 | Msa1270010:CDS | 25.0% |
| ! | CTAAAGAAGAAACACTTATA+GGG | + | chr8_3:3399807-3399826 | None:intergenic | 25.0% |
| ! | ACTAAAGAAGAAACACTTAT+AGG | + | chr8_3:3399808-3399827 | None:intergenic | 25.0% |
| ! | GAGTTCATCAAAATCAAATT+TGG | - | chr8_3:3399829-3399848 | Msa1270010:CDS | 25.0% |
| ! | ATTTGGAAAACTTGATATCT+TGG | - | chr8_3:3399846-3399865 | Msa1270010:intron | 25.0% |
| !! | TATTGACTAACAAGTTAAGA+AGG | + | chr8_3:3399902-3399921 | None:intergenic | 25.0% |
| ! | ATTAAACGATGTTTATATGC+CGG | + | chr8_3:3400082-3400101 | None:intergenic | 25.0% |
| ! | AAACATCGTTTAATCTTGAT+CGG | - | chr8_3:3400088-3400107 | Msa1270010:CDS | 25.0% |
| !! | AAATTTTAAATGGTAGAGGA+TGG | - | chr8_3:3400469-3400488 | Msa1270010:intron | 25.0% |
| !!! | TAAGTTTTAAATGGTAGAGT+TGG | - | chr8_3:3400534-3400553 | Msa1270010:intron | 25.0% |
| !!! | AAGTTTTAAATGGTAGAGTT+GGG | - | chr8_3:3400535-3400554 | Msa1270010:intron | 25.0% |
| ! | TCACAATTAAAACTTACTTG+AGG | + | chr8_3:3400591-3400610 | None:intergenic | 25.0% |
| !!! | CTGCAATCAAAAGATTTTTT+TGG | - | chr8_3:3400653-3400672 | Msa1270010:intron | 25.0% |
| !!! | TGGTATTGATTTGATTTTGT+AGG | - | chr8_3:3400699-3400718 | Msa1270010:intron | 25.0% |
| !!! | TTGATTTGATTTTGTAGGTA+AGG | - | chr8_3:3400704-3400723 | Msa1270010:intron | 25.0% |
| !!! | TGATTTGATTTTGTAGGTAA+GGG | - | chr8_3:3400705-3400724 | Msa1270010:intron | 25.0% |
| ! | GTTTATTTCAACACATTCTT+CGG | + | chr8_3:3400779-3400798 | None:intergenic | 25.0% |
| ! | TGTGTTGAAATAAACTTCTT+TGG | - | chr8_3:3400784-3400803 | Msa1270010:intron | 25.0% |
| ! | GTAAAAAAAATAGACCAGAA+GGG | + | chr8_3:3401456-3401475 | None:intergenic | 25.0% |
| ! | TGTAAAAAAAATAGACCAGA+AGG | + | chr8_3:3401457-3401476 | None:intergenic | 25.0% |
| ! | CTAATAAAGGAATTGGTTAT+GGG | - | chr8_3:3399641-3399660 | Msa1270010:CDS | 25.0% |
| ! | CTAAAGAAGAAACACTTATA+GGG | + | chr8_3:3399807-3399826 | None:intergenic | 25.0% |
| ! | ACTAAAGAAGAAACACTTAT+AGG | + | chr8_3:3399808-3399827 | None:intergenic | 25.0% |
| ! | GAGTTCATCAAAATCAAATT+TGG | - | chr8_3:3399829-3399848 | Msa1270010:CDS | 25.0% |
| ! | ATTTGGAAAACTTGATATCT+TGG | - | chr8_3:3399846-3399865 | Msa1270010:intron | 25.0% |
| !! | TATTGACTAACAAGTTAAGA+AGG | + | chr8_3:3399902-3399921 | None:intergenic | 25.0% |
| ! | ATTAAACGATGTTTATATGC+CGG | + | chr8_3:3400082-3400101 | None:intergenic | 25.0% |
| ! | AAACATCGTTTAATCTTGAT+CGG | - | chr8_3:3400088-3400107 | Msa1270010:CDS | 25.0% |
| !! | AAATTTTAAATGGTAGAGGA+TGG | - | chr8_3:3400469-3400488 | Msa1270010:intron | 25.0% |
| !!! | TAAGTTTTAAATGGTAGAGT+TGG | - | chr8_3:3400534-3400553 | Msa1270010:intron | 25.0% |
| !!! | AAGTTTTAAATGGTAGAGTT+GGG | - | chr8_3:3400535-3400554 | Msa1270010:intron | 25.0% |
| ! | TCACAATTAAAACTTACTTG+AGG | + | chr8_3:3400591-3400610 | None:intergenic | 25.0% |
| !!! | CTGCAATCAAAAGATTTTTT+TGG | - | chr8_3:3400653-3400672 | Msa1270010:intron | 25.0% |
| !!! | TGGTATTGATTTGATTTTGT+AGG | - | chr8_3:3400699-3400718 | Msa1270010:intron | 25.0% |
| !!! | TTGATTTGATTTTGTAGGTA+AGG | - | chr8_3:3400704-3400723 | Msa1270010:intron | 25.0% |
| !!! | TGATTTGATTTTGTAGGTAA+GGG | - | chr8_3:3400705-3400724 | Msa1270010:intron | 25.0% |
| ! | GTTTATTTCAACACATTCTT+CGG | + | chr8_3:3400779-3400798 | None:intergenic | 25.0% |
| ! | TGTGTTGAAATAAACTTCTT+TGG | - | chr8_3:3400784-3400803 | Msa1270010:intron | 25.0% |
| ! | GTAAAAAAAATAGACCAGAA+GGG | + | chr8_3:3401456-3401475 | None:intergenic | 25.0% |
| ! | TGTAAAAAAAATAGACCAGA+AGG | + | chr8_3:3401457-3401476 | None:intergenic | 25.0% |
| AAAAAAGAGGCTAAGGAAAA+TGG | + | chr8_3:3399513-3399532 | None:intergenic | 30.0% | |
| TAACAACAAGCTTGATCATA+AGG | - | chr8_3:3399564-3399583 | Msa1270010:CDS | 30.0% | |
| ! | ACCTTGTTAATCTTGTTTCT+AGG | - | chr8_3:3399599-3399618 | Msa1270010:CDS | 30.0% |
| ACCTAGAAACAAGATTAACA+AGG | + | chr8_3:3399603-3399622 | None:intergenic | 30.0% | |
| GCTAATAAAGGAATTGGTTA+TGG | - | chr8_3:3399640-3399659 | Msa1270010:CDS | 30.0% | |
| TTATGGGATATGCAAGAAAT+TGG | - | chr8_3:3399657-3399676 | Msa1270010:CDS | 30.0% | |
| GTAGAAAGTTTGAAAGAGTT+AGG | - | chr8_3:3399739-3399758 | Msa1270010:CDS | 30.0% | |
| TGGAGAGAATGTTGTTAAAA+AGG | - | chr8_3:3399992-3400011 | Msa1270010:intron | 30.0% | |
| !! | CATGAATCGTTCTGAAAAAT+CGG | - | chr8_3:3400415-3400434 | Msa1270010:intron | 30.0% |
| !! | GATTTGATTTTGTAGGTAAG+GGG | - | chr8_3:3400706-3400725 | Msa1270010:intron | 30.0% |
| TTCATTTGGCATAAACTGAA+AGG | + | chr8_3:3401116-3401135 | None:intergenic | 30.0% | |
| TTCAGTTTATGCCAAATGAA+TGG | - | chr8_3:3401116-3401135 | Msa1270010:CDS | 30.0% | |
| TCAGTTTATGCCAAATGAAT+GGG | - | chr8_3:3401117-3401136 | Msa1270010:CDS | 30.0% | |
| !! | GAGCATTGGAAACAAAAAAT+TGG | - | chr8_3:3401227-3401246 | Msa1270010:CDS | 30.0% |
| !! | ATTTGTTTCTGGTTACACAA+TGG | - | chr8_3:3401255-3401274 | Msa1270010:CDS | 30.0% |
| !! | CAGCTTTAAATTCTTACACA+AGG | - | chr8_3:3401284-3401303 | Msa1270010:CDS | 30.0% |
| TATCAGTCTTAACAAAGTCA+GGG | + | chr8_3:3401354-3401373 | None:intergenic | 30.0% | |
| ATATCAGTCTTAACAAAGTC+AGG | + | chr8_3:3401355-3401374 | None:intergenic | 30.0% | |
| ACTGATATTAACGAGATGAA+AGG | - | chr8_3:3401367-3401386 | Msa1270010:intron | 30.0% | |
| CTGATATTAACGAGATGAAA+GGG | - | chr8_3:3401368-3401387 | Msa1270010:intron | 30.0% | |
| AAAAAAGAGGCTAAGGAAAA+TGG | + | chr8_3:3399513-3399532 | None:intergenic | 30.0% | |
| TAACAACAAGCTTGATCATA+AGG | - | chr8_3:3399564-3399583 | Msa1270010:CDS | 30.0% | |
| ! | ACCTTGTTAATCTTGTTTCT+AGG | - | chr8_3:3399599-3399618 | Msa1270010:CDS | 30.0% |
| ACCTAGAAACAAGATTAACA+AGG | + | chr8_3:3399603-3399622 | None:intergenic | 30.0% | |
| GCTAATAAAGGAATTGGTTA+TGG | - | chr8_3:3399640-3399659 | Msa1270010:CDS | 30.0% | |
| TTATGGGATATGCAAGAAAT+TGG | - | chr8_3:3399657-3399676 | Msa1270010:CDS | 30.0% | |
| GTAGAAAGTTTGAAAGAGTT+AGG | - | chr8_3:3399739-3399758 | Msa1270010:CDS | 30.0% | |
| TGGAGAGAATGTTGTTAAAA+AGG | - | chr8_3:3399992-3400011 | Msa1270010:intron | 30.0% | |
| !! | CATGAATCGTTCTGAAAAAT+CGG | - | chr8_3:3400415-3400434 | Msa1270010:intron | 30.0% |
| !! | GATTTGATTTTGTAGGTAAG+GGG | - | chr8_3:3400706-3400725 | Msa1270010:intron | 30.0% |
| TTCATTTGGCATAAACTGAA+AGG | + | chr8_3:3401116-3401135 | None:intergenic | 30.0% | |
| TTCAGTTTATGCCAAATGAA+TGG | - | chr8_3:3401116-3401135 | Msa1270010:CDS | 30.0% | |
| TCAGTTTATGCCAAATGAAT+GGG | - | chr8_3:3401117-3401136 | Msa1270010:CDS | 30.0% | |
| !! | GAGCATTGGAAACAAAAAAT+TGG | - | chr8_3:3401227-3401246 | Msa1270010:CDS | 30.0% |
| !! | ATTTGTTTCTGGTTACACAA+TGG | - | chr8_3:3401255-3401274 | Msa1270010:CDS | 30.0% |
| !! | CAGCTTTAAATTCTTACACA+AGG | - | chr8_3:3401284-3401303 | Msa1270010:CDS | 30.0% |
| TATCAGTCTTAACAAAGTCA+GGG | + | chr8_3:3401354-3401373 | None:intergenic | 30.0% | |
| ATATCAGTCTTAACAAAGTC+AGG | + | chr8_3:3401355-3401374 | None:intergenic | 30.0% | |
| ACTGATATTAACGAGATGAA+AGG | - | chr8_3:3401367-3401386 | Msa1270010:intron | 30.0% | |
| CTGATATTAACGAGATGAAA+GGG | - | chr8_3:3401368-3401387 | Msa1270010:intron | 30.0% | |
| CTTGAAGAAAAAAGAGGCTA+AGG | + | chr8_3:3399520-3399539 | None:intergenic | 35.0% | |
| !!! | CTTAGCCTCTTTTTTCTTCA+AGG | - | chr8_3:3399518-3399537 | Msa1270010:CDS | 35.0% |
| AGGTACCTTGAAGAAAAAAG+AGG | + | chr8_3:3399526-3399545 | None:intergenic | 35.0% | |
| GTTGTAACAGGAGCTAATAA+AGG | - | chr8_3:3399628-3399647 | Msa1270010:CDS | 35.0% | |
| ACAGGAGCTAATAAAGGAAT+TGG | - | chr8_3:3399634-3399653 | Msa1270010:CDS | 35.0% | |
| ACTGCTAGAAATGAGAAAAG+AGG | - | chr8_3:3399706-3399725 | Msa1270010:CDS | 35.0% | |
| GAAAAACCACAAAGTCAGAA+AGG | + | chr8_3:3399765-3399784 | None:intergenic | 35.0% | |
| TGGAAAACTTGATATCTTGG+TGG | - | chr8_3:3399849-3399868 | Msa1270010:intron | 35.0% | |
| GGAAAACTTGATATCTTGGT+GGG | - | chr8_3:3399850-3399869 | Msa1270010:intron | 35.0% | |
| ATCGTTTAATCTTGATCGGA+CGG | - | chr8_3:3400092-3400111 | Msa1270010:CDS | 35.0% | |
| GTTATCAAATCCAACCAAGA+TGG | - | chr8_3:3400186-3400205 | Msa1270010:CDS | 35.0% | |
| ATAACTTGAGCTCAATCACT+TGG | + | chr8_3:3400385-3400404 | None:intergenic | 35.0% | |
| !! | AATCGTTCTGAAAAATCGGA+AGG | - | chr8_3:3400419-3400438 | Msa1270010:intron | 35.0% |
| TAAGGGGTGAAATATCTGAT+TGG | - | chr8_3:3400722-3400741 | Msa1270010:intron | 35.0% | |
| TGAAGTAGATAGTTGGAGAA+GGG | + | chr8_3:3400839-3400858 | None:intergenic | 35.0% | |
| CAATTGTGTCAATATCGTGT+CGG | - | chr8_3:3401018-3401037 | Msa1270010:intron | 35.0% | |
| ! | AGATTACAAAGAAGGAGCAT+TGG | - | chr8_3:3401213-3401232 | Msa1270010:CDS | 35.0% |
| AATTGGCCAACATTTGTTTC+TGG | - | chr8_3:3401244-3401263 | Msa1270010:CDS | 35.0% | |
| GTGTAACCAGAAACAAATGT+TGG | + | chr8_3:3401253-3401272 | None:intergenic | 35.0% | |
| !!! | GGGTTTTTAAGCATTGATGA+AGG | - | chr8_3:3401388-3401407 | Msa1270010:intron | 35.0% |
| CTTGAAGAAAAAAGAGGCTA+AGG | + | chr8_3:3399520-3399539 | None:intergenic | 35.0% | |
| !!! | CTTAGCCTCTTTTTTCTTCA+AGG | - | chr8_3:3399518-3399537 | Msa1270010:CDS | 35.0% |
| AGGTACCTTGAAGAAAAAAG+AGG | + | chr8_3:3399526-3399545 | None:intergenic | 35.0% | |
| GTTGTAACAGGAGCTAATAA+AGG | - | chr8_3:3399628-3399647 | Msa1270010:CDS | 35.0% | |
| ACAGGAGCTAATAAAGGAAT+TGG | - | chr8_3:3399634-3399653 | Msa1270010:CDS | 35.0% | |
| ACTGCTAGAAATGAGAAAAG+AGG | - | chr8_3:3399706-3399725 | Msa1270010:CDS | 35.0% | |
| GAAAAACCACAAAGTCAGAA+AGG | + | chr8_3:3399765-3399784 | None:intergenic | 35.0% | |
| TGGAAAACTTGATATCTTGG+TGG | - | chr8_3:3399849-3399868 | Msa1270010:intron | 35.0% | |
| GGAAAACTTGATATCTTGGT+GGG | - | chr8_3:3399850-3399869 | Msa1270010:intron | 35.0% | |
| ATCGTTTAATCTTGATCGGA+CGG | - | chr8_3:3400092-3400111 | Msa1270010:CDS | 35.0% | |
| GTTATCAAATCCAACCAAGA+TGG | - | chr8_3:3400186-3400205 | Msa1270010:CDS | 35.0% | |
| ATAACTTGAGCTCAATCACT+TGG | + | chr8_3:3400385-3400404 | None:intergenic | 35.0% | |
| !! | AATCGTTCTGAAAAATCGGA+AGG | - | chr8_3:3400419-3400438 | Msa1270010:intron | 35.0% |
| TAAGGGGTGAAATATCTGAT+TGG | - | chr8_3:3400722-3400741 | Msa1270010:intron | 35.0% | |
| TGAAGTAGATAGTTGGAGAA+GGG | + | chr8_3:3400839-3400858 | None:intergenic | 35.0% | |
| CAATTGTGTCAATATCGTGT+CGG | - | chr8_3:3401018-3401037 | Msa1270010:intron | 35.0% | |
| ! | AGATTACAAAGAAGGAGCAT+TGG | - | chr8_3:3401213-3401232 | Msa1270010:CDS | 35.0% |
| AATTGGCCAACATTTGTTTC+TGG | - | chr8_3:3401244-3401263 | Msa1270010:CDS | 35.0% | |
| GTGTAACCAGAAACAAATGT+TGG | + | chr8_3:3401253-3401272 | None:intergenic | 35.0% | |
| !!! | GGGTTTTTAAGCATTGATGA+AGG | - | chr8_3:3401388-3401407 | Msa1270010:intron | 35.0% |
| TCTAGGTATGCAGTTGTAAC+AGG | - | chr8_3:3399616-3399635 | Msa1270010:CDS | 40.0% | |
| ! | TGCAAGAAATTGGCTTCAAG+AGG | - | chr8_3:3399667-3399686 | Msa1270010:CDS | 40.0% |
| !! | ATTGGCTTCAAGAGGTGTTA+TGG | - | chr8_3:3399675-3399694 | Msa1270010:CDS | 40.0% |
| ! | TTTGGAATCATTGGTACCGT+AGG | - | chr8_3:3399935-3399954 | Msa1270010:intron | 40.0% |
| ! | AAAGATGACTTGCACCATCT+TGG | + | chr8_3:3400203-3400222 | None:intergenic | 40.0% |
| GAAGTAGATAGTTGGAGAAG+GGG | + | chr8_3:3400838-3400857 | None:intergenic | 40.0% | |
| GTGAAGTAGATAGTTGGAGA+AGG | + | chr8_3:3400840-3400859 | None:intergenic | 40.0% | |
| ! | CTTGAATTTTCCACGTCTAG+AGG | + | chr8_3:3400881-3400900 | None:intergenic | 40.0% |
| CTCTAGACGTGGAAAATTCA+AGG | - | chr8_3:3400879-3400898 | Msa1270010:intron | 40.0% | |
| CGACACGATATTGACACAAT+TGG | + | chr8_3:3401020-3401039 | None:intergenic | 40.0% | |
| ACGTCTTCAATCTCAAGTGT+CGG | - | chr8_3:3401056-3401075 | Msa1270010:intron | 40.0% | |
| CACAATTTATGCGGAAACGA+GGG | + | chr8_3:3401327-3401346 | None:intergenic | 40.0% | |
| ACACAATTTATGCGGAAACG+AGG | + | chr8_3:3401328-3401347 | None:intergenic | 40.0% | |
| CAGGGCATACACAATTTATG+CGG | + | chr8_3:3401336-3401355 | None:intergenic | 40.0% | |
| TCTAGGTATGCAGTTGTAAC+AGG | - | chr8_3:3399616-3399635 | Msa1270010:CDS | 40.0% | |
| ! | TGCAAGAAATTGGCTTCAAG+AGG | - | chr8_3:3399667-3399686 | Msa1270010:CDS | 40.0% |
| !! | ATTGGCTTCAAGAGGTGTTA+TGG | - | chr8_3:3399675-3399694 | Msa1270010:CDS | 40.0% |
| ! | TTTGGAATCATTGGTACCGT+AGG | - | chr8_3:3399935-3399954 | Msa1270010:intron | 40.0% |
| ! | AAAGATGACTTGCACCATCT+TGG | + | chr8_3:3400203-3400222 | None:intergenic | 40.0% |
| GAAGTAGATAGTTGGAGAAG+GGG | + | chr8_3:3400838-3400857 | None:intergenic | 40.0% | |
| GTGAAGTAGATAGTTGGAGA+AGG | + | chr8_3:3400840-3400859 | None:intergenic | 40.0% | |
| ! | CTTGAATTTTCCACGTCTAG+AGG | + | chr8_3:3400881-3400900 | None:intergenic | 40.0% |
| CTCTAGACGTGGAAAATTCA+AGG | - | chr8_3:3400879-3400898 | Msa1270010:intron | 40.0% | |
| CGACACGATATTGACACAAT+TGG | + | chr8_3:3401020-3401039 | None:intergenic | 40.0% | |
| ACGTCTTCAATCTCAAGTGT+CGG | - | chr8_3:3401056-3401075 | Msa1270010:intron | 40.0% | |
| CACAATTTATGCGGAAACGA+GGG | + | chr8_3:3401327-3401346 | None:intergenic | 40.0% | |
| ACACAATTTATGCGGAAACG+AGG | + | chr8_3:3401328-3401347 | None:intergenic | 40.0% | |
| CAGGGCATACACAATTTATG+CGG | + | chr8_3:3401336-3401355 | None:intergenic | 40.0% | |
| GTTAGGCCTTTCTGACTTTG+TGG | - | chr8_3:3399756-3399775 | Msa1270010:CDS | 45.0% | |
| ACACCAGCATTGTTCACCTA+CGG | + | chr8_3:3399954-3399973 | None:intergenic | 45.0% | |
| GTTGCTGGAGGAATAGTGAA+TGG | - | chr8_3:3399972-3399991 | Msa1270010:intron | 45.0% | |
| CTTCCATGCATTCTTGTTGC+CGG | - | chr8_3:3400060-3400079 | Msa1270010:intron | 45.0% | |
| ! | ATGACTTGCACCATCTTGGT+TGG | + | chr8_3:3400199-3400218 | None:intergenic | 45.0% |
| TCCAACTATCTACTTCACCC+AGG | - | chr8_3:3400842-3400861 | Msa1270010:intron | 45.0% | |
| TCCTGGGTGAAGTAGATAGT+TGG | + | chr8_3:3400846-3400865 | None:intergenic | 45.0% | |
| GAGGAGACATTGACAATCCT+GGG | + | chr8_3:3400862-3400881 | None:intergenic | 45.0% | |
| AGAGGAGACATTGACAATCC+TGG | + | chr8_3:3400863-3400882 | None:intergenic | 45.0% | |
| GAGAGAGAGAGAGAGAAATG+TGG | + | chr8_3:3400916-3400935 | None:intergenic | 45.0% | |
| CTCTCTCTCTCTCTTTCTCA+CGG | - | chr8_3:3400923-3400942 | Msa1270010:intron | 45.0% | |
| CTCTCTCTTTCTCACGGTAT+TGG | - | chr8_3:3400929-3400948 | Msa1270010:intron | 45.0% | |
| ! | TGTCAATATCGTGTCGGTGT+CGG | - | chr8_3:3401024-3401043 | Msa1270010:intron | 45.0% |
| ATGCCAAATGAATGGGCAAG+AGG | - | chr8_3:3401124-3401143 | Msa1270010:CDS | 45.0% | |
| ACTCCTCTTGCCCATTCATT+TGG | + | chr8_3:3401130-3401149 | None:intergenic | 45.0% | |
| GGCAACAATGCTAGATTCAC+AGG | + | chr8_3:3401424-3401443 | None:intergenic | 45.0% | |
| CTAGCATTGTTGCCAGATGA+TGG | - | chr8_3:3401430-3401449 | Msa1270010:intron | 45.0% | |
| GTTAGGCCTTTCTGACTTTG+TGG | - | chr8_3:3399756-3399775 | Msa1270010:CDS | 45.0% | |
| ACACCAGCATTGTTCACCTA+CGG | + | chr8_3:3399954-3399973 | None:intergenic | 45.0% | |
| GTTGCTGGAGGAATAGTGAA+TGG | - | chr8_3:3399972-3399991 | Msa1270010:intron | 45.0% | |
| CTTCCATGCATTCTTGTTGC+CGG | - | chr8_3:3400060-3400079 | Msa1270010:intron | 45.0% | |
| ! | ATGACTTGCACCATCTTGGT+TGG | + | chr8_3:3400199-3400218 | None:intergenic | 45.0% |
| TCCAACTATCTACTTCACCC+AGG | - | chr8_3:3400842-3400861 | Msa1270010:intron | 45.0% | |
| TCCTGGGTGAAGTAGATAGT+TGG | + | chr8_3:3400846-3400865 | None:intergenic | 45.0% | |
| GAGGAGACATTGACAATCCT+GGG | + | chr8_3:3400862-3400881 | None:intergenic | 45.0% | |
| AGAGGAGACATTGACAATCC+TGG | + | chr8_3:3400863-3400882 | None:intergenic | 45.0% | |
| GAGAGAGAGAGAGAGAAATG+TGG | + | chr8_3:3400916-3400935 | None:intergenic | 45.0% | |
| CTCTCTCTCTCTCTTTCTCA+CGG | - | chr8_3:3400923-3400942 | Msa1270010:intron | 45.0% | |
| CTCTCTCTTTCTCACGGTAT+TGG | - | chr8_3:3400929-3400948 | Msa1270010:intron | 45.0% | |
| ! | TGTCAATATCGTGTCGGTGT+CGG | - | chr8_3:3401024-3401043 | Msa1270010:intron | 45.0% |
| ATGCCAAATGAATGGGCAAG+AGG | - | chr8_3:3401124-3401143 | Msa1270010:CDS | 45.0% | |
| ACTCCTCTTGCCCATTCATT+TGG | + | chr8_3:3401130-3401149 | None:intergenic | 45.0% | |
| GGCAACAATGCTAGATTCAC+AGG | + | chr8_3:3401424-3401443 | None:intergenic | 45.0% | |
| CTAGCATTGTTGCCAGATGA+TGG | - | chr8_3:3401430-3401449 | Msa1270010:intron | 45.0% | |
| !! | TTTAAATAAATTTAAAAAGT+AGG | - | chr8_3:3400151-3400170 | Msa1270010:CDS | 5.0% |
| !! | CTATTTATAAAAATTATTAT+CGG | + | chr8_3:3400982-3401001 | None:intergenic | 5.0% |
| !! | TTTAAATAAATTTAAAAAGT+AGG | - | chr8_3:3400151-3400170 | Msa1270010:CDS | 5.0% |
| !! | CTATTTATAAAAATTATTAT+CGG | + | chr8_3:3400982-3401001 | None:intergenic | 5.0% |
| GTACCGTAGGTGAACAATGC+TGG | - | chr8_3:3399948-3399967 | Msa1270010:intron | 50.0% | |
| !! | GTGAACAATGCTGGTGTTGC+TGG | - | chr8_3:3399957-3399976 | Msa1270010:intron | 50.0% |
| !! | AACAATGCTGGTGTTGCTGG+AGG | - | chr8_3:3399960-3399979 | Msa1270010:intron | 50.0% |
| ATGCCGGCAACAAGAATGCA+TGG | + | chr8_3:3400066-3400085 | None:intergenic | 50.0% | |
| GTCAATGTCTCCTCTAGACG+TGG | - | chr8_3:3400868-3400887 | Msa1270010:intron | 50.0% | |
| GTACCGTAGGTGAACAATGC+TGG | - | chr8_3:3399948-3399967 | Msa1270010:intron | 50.0% | |
| !! | GTGAACAATGCTGGTGTTGC+TGG | - | chr8_3:3399957-3399976 | Msa1270010:intron | 50.0% |
| !! | AACAATGCTGGTGTTGCTGG+AGG | - | chr8_3:3399960-3399979 | Msa1270010:intron | 50.0% |
| ATGCCGGCAACAAGAATGCA+TGG | + | chr8_3:3400066-3400085 | None:intergenic | 50.0% | |
| GTCAATGTCTCCTCTAGACG+TGG | - | chr8_3:3400868-3400887 | Msa1270010:intron | 50.0% | |
| ! | TTGCCAGATGATGGCCCTTC+TGG | - | chr8_3:3401439-3401458 | Msa1270010:intron | 55.0% |
| AGACCAGAAGGGCCATCATC+TGG | + | chr8_3:3401445-3401464 | None:intergenic | 55.0% | |
| ! | TTGCCAGATGATGGCCCTTC+TGG | - | chr8_3:3401439-3401458 | Msa1270010:intron | 55.0% |
| AGACCAGAAGGGCCATCATC+TGG | + | chr8_3:3401445-3401464 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 3399482 | 3401501 | 3399482 | ID=Msa1270010;Name=Msa1270010 |
| chr8_3 | mRNA | 3399482 | 3401501 | 3399482 | ID=Msa1270010-mRNA-1;Parent=Msa1270010;Name=Msa1270010-mRNA-1;_AED=0.09;_eAED=0.10;_QI=0|0|0|1|1|1|5|0|294 |
| chr8_3 | exon | 3401482 | 3401501 | 3401482 | ID=Msa1270010-mRNA-1:exon:1098;Parent=Msa1270010-mRNA-1 |
| chr8_3 | exon | 3401116 | 3401362 | 3401116 | ID=Msa1270010-mRNA-1:exon:1097;Parent=Msa1270010-mRNA-1 |
| chr8_3 | exon | 3400970 | 3401026 | 3400970 | ID=Msa1270010-mRNA-1:exon:1096;Parent=Msa1270010-mRNA-1 |
| chr8_3 | exon | 3400083 | 3400262 | 3400083 | ID=Msa1270010-mRNA-1:exon:1095;Parent=Msa1270010-mRNA-1 |
| chr8_3 | exon | 3399482 | 3399862 | 3399482 | ID=Msa1270010-mRNA-1:exon:1094;Parent=Msa1270010-mRNA-1 |
| chr8_3 | CDS | 3401482 | 3401501 | 3401482 | ID=Msa1270010-mRNA-1:cds;Parent=Msa1270010-mRNA-1 |
| chr8_3 | CDS | 3401116 | 3401362 | 3401116 | ID=Msa1270010-mRNA-1:cds;Parent=Msa1270010-mRNA-1 |
| chr8_3 | CDS | 3400970 | 3401026 | 3400970 | ID=Msa1270010-mRNA-1:cds;Parent=Msa1270010-mRNA-1 |
| chr8_3 | CDS | 3400083 | 3400262 | 3400083 | ID=Msa1270010-mRNA-1:cds;Parent=Msa1270010-mRNA-1 |
| chr8_3 | CDS | 3399482 | 3399862 | 3399482 | ID=Msa1270010-mRNA-1:cds;Parent=Msa1270010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
