AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0488410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0488410 MtrunA17_Chr3g0078271 99.290 704 4 1 1 703 1 704 0.0 1419
Msa0488410 MtrunA17_Chr8g0355141 78.223 574 109 10 142 703 195 764 0.0 882
Msa0488410 MtrunA17_Chr8g0368211 64.000 75 25 2 403 477 1 73 4.61e-22 92.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0488410 AT2G27100.1 61.300 646 202 19 84 703 97 720 0.0 695

Find 279 sgRNAs with CRISPR-Local

Find 630 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTCTTCTCTCCATTTCT+AGG 0.134175 3_4:+8141369 Msa0488410:five_prime_UTR
TCCAGTAACCTTCGCTTTAA+AGG 0.144365 3_4:-8147585 None:intergenic
GCCTTTAAAGCGAAGGTTAC+TGG 0.178081 3_4:+8147584 Msa0488410:CDS
CCGTGGCTTAACATCTATTA+AGG 0.179953 3_4:+8146590 Msa0488410:CDS
ATATCTTCTTGTATCCTTCT+AGG 0.180061 3_4:-8146435 None:intergenic
CGTAAGCTTGACAAGGAAAA+AGG 0.217997 3_4:+8146480 Msa0488410:CDS
ATCTGTTTCCTCCTCTGAAT+TGG 0.224196 3_4:-8146322 None:intergenic
ATGACAGTAACTTCTTCTTC+TGG 0.235175 3_4:-8148978 None:intergenic
AGCAAATTGAAATTATGATT+TGG 0.243868 3_4:-8149466 None:intergenic
TCTTCATGCCTTGCTCCTTC+TGG 0.255229 3_4:-8146729 None:intergenic
GGATATCAAAACGGAATTTC+TGG 0.258959 3_4:+8143226 Msa0488410:CDS
ATTCATGGTGTAGATTATTA+TGG 0.272200 3_4:+8146663 Msa0488410:CDS
AAGTTGCGATGCAGATGTTT+AGG 0.279432 3_4:+8147935 Msa0488410:CDS
CTCCTCTGAATTGGGCTCAC+TGG 0.296081 3_4:-8146313 None:intergenic
TAGCGGCGGTCACGATAGTT+AGG 0.305964 3_4:-8141654 None:intergenic
GCAAATTGAAATTATGATTT+GGG 0.305967 3_4:-8149465 None:intergenic
AATTATGTTGGCCTTGTATC+AGG 0.312900 3_4:+8149379 Msa0488410:three_prime_UTR
CTGGTTTGGCTCATTGAGAT+TGG 0.315755 3_4:+8149026 Msa0488410:three_prime_UTR
AAGAAGATGAAGAAATGAAA+TGG 0.316200 3_4:-8141349 None:intergenic
GGGTTGGGGTTAGGTGGAGG+TGG 0.324888 3_4:-8141495 None:intergenic
TGTAATCTAGTTGTAATAAT+GGG 0.326501 3_4:+8149098 Msa0488410:three_prime_UTR
TCTGTTTCCTCCTCTGAATT+GGG 0.330335 3_4:-8146321 None:intergenic
CTGTAATCTAGTTGTAATAA+TGG 0.330615 3_4:+8149097 Msa0488410:three_prime_UTR
ACATGGCAGGGGATCTAATA+AGG 0.335645 3_4:+8146365 Msa0488410:CDS
GAAAAGTATGGTTGGAAGTA+TGG 0.336039 3_4:+8146909 Msa0488410:CDS
ACTGGCTTGCTCTGATTTAG+TGG 0.341815 3_4:-8146295 None:intergenic
AGTTGCGATGCAGATGTTTA+GGG 0.344816 3_4:+8147936 Msa0488410:CDS
ACACACTTATAACATATCTT+TGG 0.344912 3_4:+8146637 Msa0488410:CDS
TTCTAATGTTACAACATCTA+TGG 0.354148 3_4:-8149144 None:intergenic
AACATCTATTAAGGGCTTAG+AGG 0.355957 3_4:+8146599 Msa0488410:CDS
GGAGGTGGAGCGGTGGTGGT+TGG 0.356369 3_4:-8141456 None:intergenic
AACATCTGCATCGCAACTTC+TGG 0.357957 3_4:-8147931 None:intergenic
AAATCGCGACGACGAGGGTT+GGG 0.359076 3_4:-8141510 None:intergenic
CTCCTGGATGAATTGCTTAT+AGG 0.362268 3_4:-8145512 None:intergenic
GCTTGTAGGTTTCACTGGTT+TGG 0.363855 3_4:+8149012 Msa0488410:exon
CGCGGCCACCTCGGCCGCCA+CGG 0.365642 3_4:-8141572 None:intergenic
ATGAAGAAATGAAATGGGTT+TGG 0.371123 3_4:-8141343 None:intergenic
ACATATCTTTGGCGGATTCA+TGG 0.376855 3_4:+8146648 Msa0488410:CDS
CTCCGCATCCGTCGGGGATC+AGG 0.378643 3_4:-8148060 None:intergenic
CATAGACTATCGGAGCTTGT+AGG 0.379735 3_4:+8148998 Msa0488410:CDS
CCAGGTACAGGCATCAAAAC+TGG 0.382108 3_4:-8147786 None:intergenic
CGACGACGAGGGTTGGGGTT+AGG 0.385071 3_4:-8141504 None:intergenic
TTGTTCTGTCGCTCCTATCC+TGG 0.391046 3_4:-8147644 None:intergenic
ATTACTGTAAGTAAATTTGT+TGG 0.391234 3_4:-8145913 None:intergenic
CGATCCCACTTAGTGGGATA+AGG 0.392410 3_4:+8149300 Msa0488410:three_prime_UTR
GGCCGAGGTGGCCGCGGTGG+AGG 0.393766 3_4:+8141579 Msa0488410:CDS
CGTGGCGGCCGAGGTGGCCG+CGG 0.394289 3_4:+8141573 Msa0488410:CDS
CCCCTTCTAGATCTCTTATA+CGG 0.400477 3_4:-8141714 None:intergenic
TATGAACGGGGAGGTGGAAG+GGG 0.400499 3_4:+8143151 Msa0488410:CDS
TCAGGAATGACGATGCGTTC+TGG 0.403076 3_4:+8147985 Msa0488410:CDS
TGTTGTGGATAATCAAACTA+TGG 0.406352 3_4:+8149350 Msa0488410:three_prime_UTR
TTCTCTTCTCTCCATTTCTA+GGG 0.409479 3_4:+8141370 Msa0488410:five_prime_UTR
TGACAGTAACTTCTTCTTCT+GGG 0.410350 3_4:-8148977 None:intergenic
TTTATACCTATTCAGGCCTC+TGG 0.412686 3_4:+8147888 Msa0488410:intron
AGAAGATGAAGAAATGAAAT+GGG 0.414047 3_4:-8141348 None:intergenic
GCCTGGATCCCTTGGAAGTA+AGG 0.418306 3_4:+8146817 Msa0488410:CDS
CACTTATAACATATCTTTGG+CGG 0.418530 3_4:+8146640 Msa0488410:CDS
AAAATTAGGGATGAAAAGTA+TGG 0.418748 3_4:+8146897 Msa0488410:CDS
CGAGGGTTGGGGTTAGGTGG+AGG 0.418872 3_4:-8141498 None:intergenic
ATGAATGGAAACCCTAGAAA+TGG 0.419272 3_4:-8141381 None:intergenic
GTTAGTTCCAACACAAGCTC+TGG 0.419611 3_4:-8147005 None:intergenic
AGGAGGAGGTGGAGCGGTGG+TGG 0.419667 3_4:-8141460 None:intergenic
CGTGGCTTAACATCTATTAA+GGG 0.420071 3_4:+8146591 Msa0488410:CDS
GCAGAGAAGGTTGGACAGCC+TGG 0.420227 3_4:+8146800 Msa0488410:CDS
CGTCCTCACCGTGGCGGCCG+AGG 0.422279 3_4:+8141564 Msa0488410:CDS
TAAGTACCTCCGCATCCGTC+GGG 0.423656 3_4:-8148067 None:intergenic
AGAAGATATTCATCAGGTTC+AGG 0.424015 3_4:+8146449 Msa0488410:CDS
CGAGGTGGCCGCGGTGGAGG+TGG 0.424378 3_4:+8141582 Msa0488410:CDS
CTTAGAGGGTGTTGAGCTAC+TGG 0.424649 3_4:+8146614 Msa0488410:CDS
GGCGTTCCACCAGGAGCATC+AGG 0.425251 3_4:-8147172 None:intergenic
GAACGGGGAGGTGGAAGGGG+TGG 0.427644 3_4:+8143154 Msa0488410:CDS
GAATGAAAATGCTCGACGTT+TGG 0.427952 3_4:+8146095 Msa0488410:CDS
AGCTAAGTCGGGGTCAGAAT+GGG 0.431013 3_4:+8146755 Msa0488410:CDS
CTTTGCAGTCCTTACTTCCA+AGG 0.431457 3_4:-8146826 None:intergenic
CACCTCCACCGCGGCCACCT+CGG 0.431991 3_4:-8141581 None:intergenic
TCACTTCGGTGGCTATGAAC+GGG 0.433155 3_4:+8143138 Msa0488410:CDS
TGAAAGATGATCGTGGGAAT+CGG 0.435042 3_4:+8147616 Msa0488410:CDS
TCCTTACTTCCAAGGGATCC+AGG 0.438671 3_4:-8146818 None:intergenic
GTTTCCATTCATCTCTTCAA+TGG 0.441656 3_4:+8141392 Msa0488410:exon
TGCGTTCTGGTCCTCACATA+GGG 0.441667 3_4:+8147998 Msa0488410:CDS
ACCTGAGATTGCTGCATGAC+AGG 0.446698 3_4:-8147193 None:intergenic
CTGTCAGTTCTGAACCTAGA+AGG 0.448137 3_4:+8146421 Msa0488410:CDS
GGAACTAACATCAAAATTGC+GGG 0.448450 3_4:+8147019 Msa0488410:CDS
GTATATCATCTTCAAGCTCC+TGG 0.449728 3_4:-8145528 None:intergenic
GGTTTCCCAACTGCCTCTCA+TGG 0.451422 3_4:-8147695 None:intergenic
TCATGGGATGGCGAACTGTC+AGG 0.456344 3_4:-8147678 None:intergenic
GTTTGTGGATGTCAGTGACC+TGG 0.458850 3_4:+8149414 Msa0488410:three_prime_UTR
TCGGAGCTTGTAGGTTTCAC+TGG 0.460462 3_4:+8149007 Msa0488410:exon
GTTGGACAGCCTGGATCCCT+TGG 0.462251 3_4:+8146809 Msa0488410:CDS
TTATGCAATTACCTGTCGTT+AGG 0.463422 3_4:-8141750 None:intergenic
CACTGACATCCACAAACAAT+AGG 0.463690 3_4:-8149408 None:intergenic
CAGCTAAGTCGGGGTCAGAA+TGG 0.467971 3_4:+8146754 Msa0488410:CDS
TTGATGCCTGTACCTGGTGC+CGG 0.468596 3_4:+8147792 Msa0488410:CDS
TGATGCCTGTACCTGGTGCC+GGG 0.471237 3_4:+8147793 Msa0488410:CDS
CGACGAGACTGCTGCGGAGG+AGG 0.471743 3_4:-8141681 None:intergenic
CATGAAGAAACAGCTAAGTC+GGG 0.472186 3_4:+8146744 Msa0488410:CDS
GATAGGAGCGACAGAACAAA+TGG 0.472382 3_4:+8147648 Msa0488410:CDS
TATGATTTGTGCAGAAATCC+AGG 0.472977 3_4:+8146258 Msa0488410:intron
GGAGGTGGGAGATCGTCGTC+AGG 0.475713 3_4:-8141480 None:intergenic
CGCCGTATAAGAGATCTAGA+AGG 0.476081 3_4:+8141712 Msa0488410:CDS
GCCTGTCATGCAGCAATCTC+AGG 0.476952 3_4:+8147192 Msa0488410:CDS
GAACTGACAGGGTGAGCCTT+CGG 0.478155 3_4:-8146408 None:intergenic
CGATTTCTCTGCTGCTCCGA+AGG 0.478520 3_4:+8146392 Msa0488410:CDS
ATCGCAACTTCTGGTGGAGC+AGG 0.479254 3_4:-8147922 None:intergenic
TCTCACATGCCTAAAACCTT+TGG 0.481229 3_4:-8146706 None:intergenic
GGTGGCTATGAACGGGGAGG+TGG 0.481462 3_4:+8143145 Msa0488410:CDS
TCCCACGATCATCTTTCAAT+CGG 0.481981 3_4:-8147611 None:intergenic
GTGGATGCAGAGTTTAAACC+TGG 0.485312 3_4:-8146276 None:intergenic
GGCAGATTTCCACATCGATC+TGG 0.487532 3_4:+8143199 Msa0488410:CDS
TGTAGTGATCCTGATGCTCC+TGG 0.490637 3_4:+8147163 Msa0488410:intron
GGCGGCCGAGGTGGCCGCGG+TGG 0.490769 3_4:+8141576 Msa0488410:CDS
GCTATGAACGGGGAGGTGGA+AGG 0.493281 3_4:+8143149 Msa0488410:CDS
CCATCCCATGAGAGGCAGTT+GGG 0.495045 3_4:+8147690 Msa0488410:CDS
TCGTGGGAATCGGCGAGACC+AGG 0.497837 3_4:+8147626 Msa0488410:CDS
CCATCTTCGTATGATCCATC+AGG 0.498285 3_4:+8147967 Msa0488410:CDS
ATACCACTCCGCATCCTTGT+GGG 0.498677 3_4:-8145733 None:intergenic
AAAATCGCGACGACGAGGGT+TGG 0.499103 3_4:-8141511 None:intergenic
GGTTGGGGTTAGGTGGAGGT+GGG 0.500708 3_4:-8141494 None:intergenic
CTCGGCCGCCACGGTGAGGA+CGG 0.500922 3_4:-8141563 None:intergenic
CATAGCCACCGAAGTGATCA+TGG 0.502264 3_4:-8143132 None:intergenic
TTTGATTATCCACCAAAACC+TGG 0.502490 3_4:-8149269 None:intergenic
GCATGAAGAAACAGCTAAGT+CGG 0.504054 3_4:+8146743 Msa0488410:CDS
TATATTCCGATCCCACTTAG+TGG 0.504498 3_4:+8149293 Msa0488410:three_prime_UTR
TTTGCAGTCCTTACTTCCAA+GGG 0.506157 3_4:-8146825 None:intergenic
GAGCGGTGGTGGTTGGAGAT+CGG 0.506162 3_4:-8141449 None:intergenic
ATGCGTTCTGGTCCTCACAT+AGG 0.506680 3_4:+8147997 Msa0488410:CDS
GGCATCAAAACTGGAGGAGG+GGG 0.507533 3_4:-8147777 None:intergenic
CAAATCTGCATAACCGCGAT+TGG 0.508789 3_4:-8144580 None:intergenic
TTTAGGCATGTGAGACCAGA+AGG 0.513433 3_4:+8146714 Msa0488410:CDS
ATGCAGATGTTTAGGGATCA+AGG 0.515375 3_4:+8147943 Msa0488410:CDS
ATCTGCATCGCAACTTCTGG+TGG 0.515886 3_4:-8147928 None:intergenic
AATCGCGACGACGAGGGTTG+GGG 0.517751 3_4:-8141509 None:intergenic
CTATGAACGGGGAGGTGGAA+GGG 0.518205 3_4:+8143150 Msa0488410:CDS
AGATCGTCGTCAGGAGGAGG+TGG 0.519392 3_4:-8141471 None:intergenic
GGGAGATCGTCGTCAGGAGG+AGG 0.522110 3_4:-8141474 None:intergenic
GTTATGCAGATTTGCCAAGT+GGG 0.524038 3_4:+8144589 Msa0488410:CDS
TGCATGACAGGCGTTCCACC+AGG 0.524219 3_4:-8147181 None:intergenic
ATCACTTCGGTGGCTATGAA+CGG 0.525110 3_4:+8143137 Msa0488410:CDS
GATACAAGAAGATATTCATC+AGG 0.525306 3_4:+8146443 Msa0488410:CDS
CCCAACTGCCTCTCATGGGA+TGG 0.526209 3_4:-8147690 None:intergenic
TATACTCTGACTTGTACTCT+TGG 0.527237 3_4:-8145680 None:intergenic
ACCAACCCGGCACCAGGTAC+AGG 0.528126 3_4:-8147798 None:intergenic
GAAACAATGTTCGATGCATA+TGG 0.530275 3_4:+8147723 Msa0488410:CDS
TTGGCTCATTGAGATTGGAT+TGG 0.531912 3_4:+8149031 Msa0488410:three_prime_UTR
TCTGGTGGAGCAGGAACAAA+GGG 0.532051 3_4:-8147913 None:intergenic
TTCCCGAGCAAAATGCTACC+TGG 0.532763 3_4:+8149170 Msa0488410:three_prime_UTR
TTAGGGATGAAAAGTATGGT+TGG 0.532966 3_4:+8146901 Msa0488410:CDS
CTTCTAGGTTCAGAACTGAC+AGG 0.537567 3_4:-8146420 None:intergenic
TAAGGCTCGCAGTGGATCTG+TGG 0.539326 3_4:+8146551 Msa0488410:CDS
TACCTGTCGTTAGGTCTATG+AGG 0.541014 3_4:-8141741 None:intergenic
AAGCCACGGATAATTACTAC+AGG 0.543566 3_4:-8146576 None:intergenic
TTTGTGGATGTCAGTGACCT+GGG 0.544843 3_4:+8149415 Msa0488410:three_prime_UTR
ACAGGCATCAAAACTGGAGG+AGG 0.544938 3_4:-8147780 None:intergenic
CCGTCGGGGATCAGGTCTAA+AGG 0.547560 3_4:-8148052 None:intergenic
GAACGCATCGTCATTCCTGA+TGG 0.548956 3_4:-8147982 None:intergenic
CGGTCACGATAGTTAGGGCT+AGG 0.549799 3_4:-8141648 None:intergenic
TCGGCCATTGAAGAGATGAA+TGG 0.551754 3_4:-8141396 None:intergenic
GACCTGATCCCCGACGGATG+CGG 0.552652 3_4:+8148058 Msa0488410:CDS
CAAAGCCTTATCCCACTAAG+TGG 0.552931 3_4:-8149305 None:intergenic
ACATCTATTAAGGGCTTAGA+GGG 0.553584 3_4:+8146600 Msa0488410:CDS
GTTTCCCAACTGCCTCTCAT+GGG 0.553750 3_4:-8147694 None:intergenic
TTTCAATACCCACAAGGATG+CGG 0.555795 3_4:+8145725 Msa0488410:CDS
CTAGATCTCTTATACGGCGG+AGG 0.558280 3_4:-8141708 None:intergenic
CCTCACCGTGGCGGCCGAGG+TGG 0.560575 3_4:+8141567 Msa0488410:CDS
CCTGATGGATCATACGAAGA+TGG 0.561638 3_4:-8147967 None:intergenic
TTATACCTATTCAGGCCTCT+GGG 0.561914 3_4:+8147889 Msa0488410:intron
AGAGCAACCAACCCGGCACC+AGG 0.562907 3_4:-8147804 None:intergenic
AGGACAAGCCTTTAAAGCGA+AGG 0.563691 3_4:+8147577 Msa0488410:intron
GCCATCCCATGAGAGGCAGT+TGG 0.567581 3_4:+8147689 Msa0488410:CDS
TTCTGGTGGAGCAGGAACAA+AGG 0.568203 3_4:-8147914 None:intergenic
GTAAAAGAAGAAGACATGGC+AGG 0.568918 3_4:+8146352 Msa0488410:CDS
CATACCACTCCGCATCCTTG+TGG 0.569979 3_4:-8145734 None:intergenic
ATTTACTTACAGTAATTGAA+AGG 0.571034 3_4:+8145920 Msa0488410:CDS
CGATGTGGAAATCTGCCACC+AGG 0.571313 3_4:-8143193 None:intergenic
CTTCTAGATCTCTTATACGG+CGG 0.571503 3_4:-8141711 None:intergenic
TTATGCAGATTTGCCAAGTG+GGG 0.573070 3_4:+8144590 Msa0488410:CDS
CTTATCCCACTAAGTGGGAT+CGG 0.573648 3_4:-8149299 None:intergenic
GTCCTATAAGCAATTCATCC+AGG 0.574466 3_4:+8145510 Msa0488410:CDS
TGCTGCAGCAGCTGACATGT+TGG 0.575171 3_4:+8146860 Msa0488410:CDS
GCCGTATAAGAGATCTAGAA+GGG 0.575206 3_4:+8141713 Msa0488410:CDS
GACAGTAACTTCTTCTTCTG+GGG 0.578270 3_4:-8148976 None:intergenic
ATAAGTACCTCCGCATCCGT+CGG 0.578460 3_4:-8148068 None:intergenic
GGAATCGGCGAGACCAGGAT+AGG 0.578499 3_4:+8147631 Msa0488410:CDS
GTAATCTAGTTGTAATAATG+GGG 0.578512 3_4:+8149099 Msa0488410:three_prime_UTR
AGCCAGTGAGCCCAATTCAG+AGG 0.578683 3_4:+8146311 Msa0488410:CDS
CATCGAACATTGTTTCATCA+CGG 0.580490 3_4:-8147716 None:intergenic
TAAAAGAAGAAGACATGGCA+GGG 0.583889 3_4:+8146353 Msa0488410:CDS
GAACGACGAGACTGCTGCGG+AGG 0.585310 3_4:-8141684 None:intergenic
AAGTTACTGTCATAGACTAT+CGG 0.585625 3_4:+8148988 Msa0488410:CDS
GCCGATTGAAAGATGATCGT+GGG 0.585756 3_4:+8147610 Msa0488410:CDS
AGCGGCGGTCACGATAGTTA+GGG 0.586078 3_4:-8141653 None:intergenic
ATGTGAGACCAGAAGGAGCA+AGG 0.587740 3_4:+8146721 Msa0488410:CDS
GGGTAGTTTACAATTTGACC+TGG 0.587884 3_4:-8149445 None:intergenic
GTCAGGAGGAGGTGGAGCGG+TGG 0.588117 3_4:-8141463 None:intergenic
TCTGAGTTGAATGATACAGC+AGG 0.589557 3_4:-8147750 None:intergenic
CCACCTCGGCCGCCACGGTG+AGG 0.591302 3_4:-8141567 None:intergenic
AAGGCTCGCAGTGGATCTGT+GGG 0.592274 3_4:+8146552 Msa0488410:CDS
AAATGCTCGACGTTTGGCAA+AGG 0.592998 3_4:+8146101 Msa0488410:CDS
TTTGACCTGGATTAAAACCC+AGG 0.593127 3_4:-8149432 None:intergenic
ATATTCCGATCCCACTTAGT+GGG 0.594647 3_4:+8149294 Msa0488410:three_prime_UTR
TTTCCACATCGATCTGGAGG+GGG 0.594827 3_4:+8143205 Msa0488410:CDS
TACCTACGCTCAGCTTCAGA+TGG 0.594958 3_4:-8145553 None:intergenic
TTGATTATCCACCAAAACCT+GGG 0.595127 3_4:-8149268 None:intergenic
CGGGGATCAGGTCTAAAGGT+GGG 0.597507 3_4:-8148048 None:intergenic
TATGCAGATTTGCCAAGTGG+GGG 0.600967 3_4:+8144591 Msa0488410:CDS
TTAGTTCCAACACAAGCTCT+GGG 0.603595 3_4:-8147004 None:intergenic
AGATTTCCACATCGATCTGG+AGG 0.603786 3_4:+8143202 Msa0488410:CDS
GGTGGGAGATCGTCGTCAGG+AGG 0.604290 3_4:-8141477 None:intergenic
CGACGAGGGTTGGGGTTAGG+TGG 0.605859 3_4:-8141501 None:intergenic
ATAGGAAAAGACCTGATACA+AGG 0.607113 3_4:-8149390 None:intergenic
TCGGGGATCAGGTCTAAAGG+TGG 0.610998 3_4:-8148049 None:intergenic
TGGAACTAACATCAAAATTG+CGG 0.612164 3_4:+8147018 Msa0488410:CDS
GGCCGCCACGGTGAGGACGG+CGG 0.613259 3_4:-8141560 None:intergenic
GGCGTTTGATGTCTCTATCA+CGG 0.614422 3_4:-8141617 None:intergenic
CTGATCCCCGACGGATGCGG+AGG 0.614753 3_4:+8148061 Msa0488410:CDS
CAGGCATCAAAACTGGAGGA+GGG 0.615388 3_4:-8147779 None:intergenic
GTCCTCATAGACCTAACGAC+AGG 0.615608 3_4:+8141739 Msa0488410:CDS
GGTTATGCAGATTTGCCAAG+TGG 0.618297 3_4:+8144588 Msa0488410:CDS
ATTTCCACATCGATCTGGAG+GGG 0.621278 3_4:+8143204 Msa0488410:CDS
GTCGTCAGGAGGAGGTGGAG+CGG 0.622070 3_4:-8141466 None:intergenic
ACAGTTCGCCATCCCATGAG+AGG 0.622464 3_4:+8147682 Msa0488410:CDS
TCAGAGGAGGAAACAGATGC+CGG 0.623419 3_4:+8146327 Msa0488410:CDS
TTTGGCCATGATCACTTCGG+TGG 0.625230 3_4:+8143127 Msa0488410:CDS
GTGGTGCAGTTATCAAGACT+TGG 0.626723 3_4:+8148950 Msa0488410:intron
AAAACACCCAGAGCTTGTGT+TGG 0.626883 3_4:+8146998 Msa0488410:CDS
AGTGATCCTGATGCTCCTGG+TGG 0.627928 3_4:+8147166 Msa0488410:intron
GGAGAACGACGAGACTGCTG+CGG 0.631420 3_4:-8141687 None:intergenic
CCTTTAGACCTGATCCCCGA+CGG 0.633767 3_4:+8148052 Msa0488410:CDS
GATTTCCACATCGATCTGGA+GGG 0.634289 3_4:+8143203 Msa0488410:CDS
CACTTCGGTGGCTATGAACG+GGG 0.634430 3_4:+8143139 Msa0488410:CDS
AGGTTTGGCCATGATCACTT+CGG 0.635013 3_4:+8143124 Msa0488410:intron
AAGTACCTCCGCATCCGTCG+GGG 0.635573 3_4:-8148066 None:intergenic
GACCGCCGTCCTCACCGTGG+CGG 0.636148 3_4:+8141558 Msa0488410:CDS
GGCCGATTGAAAGATGATCG+TGG 0.636197 3_4:+8147609 Msa0488410:CDS
TATGGTTGGAAGTATGGCTG+TGG 0.637523 3_4:+8146915 Msa0488410:CDS
TTAAAGCGAAGGTTACTGGA+AGG 0.638659 3_4:+8147588 Msa0488410:CDS
GGTCGTGAGATTCGAGAGGG+AGG 0.640564 3_4:-8141428 None:intergenic
CCTTAATAGATGTTAAGCCA+CGG 0.640737 3_4:-8146590 None:intergenic
CAGTGAGCCCAATTCAGAGG+AGG 0.641145 3_4:+8146314 Msa0488410:CDS
CGTTCTGGTCCTCACATAGG+GGG 0.645123 3_4:+8148000 Msa0488410:CDS
GCGTTCTGGTCCTCACATAG+GGG 0.645525 3_4:+8147999 Msa0488410:CDS
CTTGAGACTAGTGATGCCAA+AGG 0.645562 3_4:+8146690 Msa0488410:CDS
GCAGATCTGGATGCCAATCG+CGG 0.645963 3_4:+8144567 Msa0488410:intron
CTTGGAAGTAAGGACTGCAA+AGG 0.649139 3_4:+8146827 Msa0488410:CDS
TGTTGTTCGTAAGCTTGACA+AGG 0.650753 3_4:+8146473 Msa0488410:CDS
CGGTCAAAATCGCGACGACG+AGG 0.651901 3_4:-8141516 None:intergenic
GGGAGGAACAGCAATCATAG+AGG 0.652456 3_4:-8148028 None:intergenic
AAAGCCTTATCCCACTAAGT+GGG 0.653056 3_4:-8149304 None:intergenic
TTCTAGGTTCAGAACTGACA+GGG 0.653359 3_4:-8146419 None:intergenic
GGCTATGCAGATGATAGACC+TGG 0.653573 3_4:+8143175 Msa0488410:CDS
GGTCAAAATCGCGACGACGA+GGG 0.656572 3_4:-8141515 None:intergenic
AGGCATCAAAACTGGAGGAG+GGG 0.658058 3_4:-8147778 None:intergenic
AATAGTGATAAGGCTCGCAG+TGG 0.662545 3_4:+8146543 Msa0488410:CDS
TAATCTAGTTGTAATAATGG+GGG 0.662924 3_4:+8149100 Msa0488410:three_prime_UTR
AGCTTATTTCAATACCCACA+AGG 0.664399 3_4:+8145719 Msa0488410:CDS
ATCGGTCGTGAGATTCGAGA+GGG 0.664847 3_4:-8141431 None:intergenic
GGCCCTGTAGTAATTATCCG+TGG 0.666056 3_4:+8146573 Msa0488410:CDS
GCTGCGGAGGAGGAGAATAG+CGG 0.667835 3_4:-8141671 None:intergenic
TGCCATCTGAAGCTGAGCGT+AGG 0.669466 3_4:+8145551 Msa0488410:CDS
AAAAGAAGAAGACATGGCAG+GGG 0.670768 3_4:+8146354 Msa0488410:CDS
ACAATGTTCGATGCATATGG+TGG 0.677228 3_4:+8147726 Msa0488410:CDS
ATGAAGAAACAGCTAAGTCG+GGG 0.681698 3_4:+8146745 Msa0488410:CDS
GGATCAGGTCTAAAGGTGGG+AGG 0.688645 3_4:-8148045 None:intergenic
GCGGAGGAGGAGAATAGCGG+CGG 0.691138 3_4:-8141668 None:intergenic
TTCGGTGGCTATGAACGGGG+AGG 0.691284 3_4:+8143142 Msa0488410:CDS
CGAAATCTCTGTCGTCACGA+CGG 0.694181 3_4:-8141536 None:intergenic
GGTGGTAAAAGAAGAAGACA+TGG 0.697775 3_4:+8146348 Msa0488410:CDS
GATCGGTCGTGAGATTCGAG+AGG 0.698207 3_4:-8141432 None:intergenic
GCAGGAACAAAGGGTCCCAG+AGG 0.699153 3_4:-8147904 None:intergenic
GGTACAGGCATCAAAACTGG+AGG 0.702355 3_4:-8147783 None:intergenic
GAGGAGGAAACAGATGCCGG+TGG 0.705310 3_4:+8146330 Msa0488410:CDS
ATTATCCACCAAAACCTGGG+AGG 0.707559 3_4:-8149265 None:intergenic
TTCGACCGCCGTCCTCACCG+TGG 0.713062 3_4:+8141555 Msa0488410:CDS
CCGTATAAGAGATCTAGAAG+GGG 0.715875 3_4:+8141714 Msa0488410:CDS
ATACCCACAAGGATGCGGAG+TGG 0.729545 3_4:+8145730 Msa0488410:CDS
AGCCACGGATAATTACTACA+GGG 0.753218 3_4:-8146575 None:intergenic
TATGCAGATGATAGACCTGG+TGG 0.763982 3_4:+8143178 Msa0488410:CDS
TGTAGTAACCACCTCCACCG+CGG 0.784401 3_4:-8141590 None:intergenic
AGTTAGGGCTAGGACTACGA+CGG 0.787338 3_4:-8141638 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAAATTGCATTTAT+AGG - chr3_4:8143299-8143318 None:intergenic 10.0%
!! TAAAATAAAAAAATCAATAG+AGG - chr3_4:8144062-8144081 None:intergenic 10.0%
!!! TTAATATGTTTTTTATGTTA+TGG + chr3_4:8144525-8144544 Msa0488410:intron 10.0%
!!! TAATATGTTTTTTATGTTAT+GGG + chr3_4:8144526-8144545 Msa0488410:intron 10.0%
!! AATAAAGAGTAATTAATTTA+GGG - chr3_4:8148336-8148355 None:intergenic 10.0%
!! AATATTAAAAGTAAATAAGT+TGG - chr3_4:8148362-8148381 None:intergenic 10.0%
!! AATTAATCGTTTATTAATTG+AGG + chr3_4:8141776-8141795 Msa0488410:intron 15.0%
!!! TAATTGATAGCATTTAATTT+AGG + chr3_4:8141809-8141828 Msa0488410:intron 15.0%
!!! AATTGATAGCATTTAATTTA+GGG + chr3_4:8141810-8141829 Msa0488410:intron 15.0%
!!! TCTTTTGAATAATTGTTTAT+TGG + chr3_4:8142097-8142116 Msa0488410:intron 15.0%
!!! CTTTTGAATAATTGTTTATT+GGG + chr3_4:8142098-8142117 Msa0488410:intron 15.0%
!!! ATTTCAAATAAGTTTTATCT+TGG - chr3_4:8142279-8142298 None:intergenic 15.0%
!!! TTTCTTTTGTTTTTTATGTT+AGG + chr3_4:8143413-8143432 Msa0488410:intron 15.0%
!! TAAATCTTGATCAATTAATT+GGG + chr3_4:8144423-8144442 Msa0488410:intron 15.0%
!!! ATATGTATAAATTTCCTTTT+AGG + chr3_4:8144486-8144505 Msa0488410:intron 15.0%
!!! TATGTATAAATTTCCTTTTA+GGG + chr3_4:8144487-8144506 Msa0488410:intron 15.0%
!!! AATTTTCAAATATTCTTAGA+TGG + chr3_4:8144809-8144828 Msa0488410:intron 15.0%
!! TTTAGATCAAAATCAATTAA+CGG - chr3_4:8145863-8145882 None:intergenic 15.0%
!! TTGTAAAATCCTATATATTA+AGG - chr3_4:8147339-8147358 None:intergenic 15.0%
!! TATATAATTTATACCTATTC+AGG + chr3_4:8147881-8147900 Msa0488410:intron 15.0%
!! ACATAAAAAATAGTATGATT+TGG - chr3_4:8148135-8148154 None:intergenic 15.0%
!! TCTAAAAATCACATATATAA+GGG - chr3_4:8148159-8148178 None:intergenic 15.0%
!! ATAAAGAGTAATTAATTTAG+GGG - chr3_4:8148335-8148354 None:intergenic 15.0%
!! GAATAAAGAGTAATTAATTT+AGG - chr3_4:8148337-8148356 None:intergenic 15.0%
!! ACTTATTTGAATTTATCTAC+TGG + chr3_4:8142174-8142193 Msa0488410:intron 20.0%
!!! TTTTTGCTTATATATATGAC+CGG - chr3_4:8142580-8142599 None:intergenic 20.0%
!!! TAAGCAAAAAAGTACTTTTT+AGG + chr3_4:8142590-8142609 Msa0488410:intron 20.0%
!! CATTGAATACATAATGTATT+TGG + chr3_4:8142615-8142634 Msa0488410:intron 20.0%
!! CATTCAATACTTAATGTATT+TGG - chr3_4:8142653-8142672 None:intergenic 20.0%
!!! TCATGTACTTAATTTTTCAT+GGG + chr3_4:8142755-8142774 Msa0488410:intron 20.0%
!!! TTTAAAGTCATGTATTTGAT+TGG + chr3_4:8142923-8142942 Msa0488410:intron 20.0%
!!! TTTAAAATGGTGTTATTACT+TGG + chr3_4:8143470-8143489 Msa0488410:intron 20.0%
!! TAAAATACATGCTGAATTAT+GGG - chr3_4:8143820-8143839 None:intergenic 20.0%
!! ATAAAATACATGCTGAATTA+TGG - chr3_4:8143821-8143840 None:intergenic 20.0%
!! TAAAATACTTCTGTAGTAAA+AGG + chr3_4:8143952-8143971 Msa0488410:intron 20.0%
!! GAGAATAAAAAAAACAGTAT+TGG - chr3_4:8144318-8144337 None:intergenic 20.0%
!! CTAAATCTTGATCAATTAAT+TGG + chr3_4:8144422-8144441 Msa0488410:intron 20.0%
!!! TTTTTATGTTATGGGTTTTA+TGG + chr3_4:8144534-8144553 Msa0488410:intron 20.0%
!!! TTTTATGTTATGGGTTTTAT+GGG + chr3_4:8144535-8144554 Msa0488410:intron 20.0%
!!! TTTCTCTTTTGTTTTTCATT+TGG + chr3_4:8145287-8145306 Msa0488410:intron 20.0%
!! ATTACTGTAAGTAAATTTGT+TGG - chr3_4:8145916-8145935 None:intergenic 20.0%
!! ATTTACTTACAGTAATTGAA+AGG + chr3_4:8145920-8145939 Msa0488410:CDS 20.0%
!! TAATTATATTCAATCCTATC+TGG + chr3_4:8146054-8146073 Msa0488410:intron 20.0%
!! TCTCATAATTCAATGAATTT+AGG - chr3_4:8146228-8146247 None:intergenic 20.0%
!! TCATAGTAAAAATAGTGATA+AGG + chr3_4:8146533-8146552 Msa0488410:CDS 20.0%
!!! AGAAAAAACTTGATTCATTT+TGG + chr3_4:8146778-8146797 Msa0488410:CDS 20.0%
!! ATCCATATGTTAGAAAAATT+AGG + chr3_4:8146883-8146902 Msa0488410:CDS 20.0%
!! TCCATATGTTAGAAAAATTA+GGG + chr3_4:8146884-8146903 Msa0488410:CDS 20.0%
!!! AGCTTTTTATTTTTGTTTAG+TGG + chr3_4:8147088-8147107 Msa0488410:intron 20.0%
!! CTTCTAGATATAAAATTGTA+TGG - chr3_4:8147238-8147257 None:intergenic 20.0%
!!! TACAATTAAAAGCTTTATTG+AGG + chr3_4:8147846-8147865 Msa0488410:intron 20.0%
!!! CTCTAAAAATCACATATATA+AGG - chr3_4:8148160-8148179 None:intergenic 20.0%
!!! GTCTTTTGTTTCTTATATAA+AGG - chr3_4:8148228-8148247 None:intergenic 20.0%
!!! TGGAATTTTTTTAAATGTAG+AGG - chr3_4:8148306-8148325 None:intergenic 20.0%
!!! ATTAAAAGTAAATAAGTTGG+TGG - chr3_4:8148359-8148378 None:intergenic 20.0%
!! ATTCTCTCTCATAATAAATA+AGG + chr3_4:8148379-8148398 Msa0488410:intron 20.0%
!! TTCTCTCTCATAATAAATAA+GGG + chr3_4:8148380-8148399 Msa0488410:intron 20.0%
!!! AACAAAAGTGAGAATTTTTT+TGG - chr3_4:8148467-8148486 None:intergenic 20.0%
!!! ATAAAGTTGATTGACATTTT+GGG + chr3_4:8148566-8148585 Msa0488410:intron 20.0%
!!! TCAATTTTATAAAACACATG+TGG + chr3_4:8148760-8148779 Msa0488410:intron 20.0%
!! TGGATTATTAAAATAACATG+AGG + chr3_4:8148780-8148799 Msa0488410:intron 20.0%
!! ATTATTAAAATAACATGAGG+TGG + chr3_4:8148783-8148802 Msa0488410:intron 20.0%
!! TTATTAAAATAACATGAGGT+GGG + chr3_4:8148784-8148803 Msa0488410:intron 20.0%
!!! TAATTTTAGTCAACTATACT+CGG + chr3_4:8149068-8149087 Msa0488410:three_prime_UTR 20.0%
!! TGTAATCTAGTTGTAATAAT+GGG + chr3_4:8149098-8149117 Msa0488410:three_prime_UTR 20.0%
!! CTATGGTTAAAAAATTATGT+TGG + chr3_4:8149367-8149386 Msa0488410:three_prime_UTR 20.0%
!! GCAAATTGAAATTATGATTT+GGG - chr3_4:8149468-8149487 None:intergenic 20.0%
!! AGCAAATTGAAATTATGATT+TGG - chr3_4:8149469-8149488 None:intergenic 20.0%
! AGAAGATGAAGAAATGAAAT+GGG - chr3_4:8141351-8141370 None:intergenic 25.0%
! AAGAAGATGAAGAAATGAAA+TGG - chr3_4:8141352-8141371 None:intergenic 25.0%
!! ATAGCATTTAATTTAGGGTT+AGG + chr3_4:8141815-8141834 Msa0488410:intron 25.0%
! ATTTATACGAACTGTAGAAT+AGG + chr3_4:8141842-8141861 Msa0488410:intron 25.0%
! TTTATACGAACTGTAGAATA+GGG + chr3_4:8141843-8141862 Msa0488410:intron 25.0%
!!! ATAAGTTTTGTGATGATGTT+TGG + chr3_4:8142198-8142217 Msa0488410:intron 25.0%
!!! TAAGTTTTGTGATGATGTTT+GGG + chr3_4:8142199-8142218 Msa0488410:intron 25.0%
!! TTTGTCTTTTCCAATAGAAA+TGG + chr3_4:8142386-8142405 Msa0488410:intron 25.0%
! ATAAGTTGTTTATCCAAACA+GGG + chr3_4:8142452-8142471 Msa0488410:intron 25.0%
!! TTTTTGCTTATATATGTGAC+CGG + chr3_4:8142688-8142707 Msa0488410:intron 25.0%
!! GTCATGTACTTAATTTTTCA+TGG + chr3_4:8142754-8142773 Msa0488410:intron 25.0%
!!! TGTTTGTTGTATAATGTAGA+AGG + chr3_4:8142801-8142820 Msa0488410:intron 25.0%
! GCAAAGAAAACAAATAATAC+AGG - chr3_4:8143030-8143049 None:intergenic 25.0%
! ATGTATCAGTAAACAATGAT+GGG - chr3_4:8143373-8143392 None:intergenic 25.0%
! TATGTATCAGTAAACAATGA+TGG - chr3_4:8143374-8143393 None:intergenic 25.0%
!!! CTTACTGGTGATTTTTAAAA+TGG + chr3_4:8143457-8143476 Msa0488410:intron 25.0%
! AAATTGTACAGAAAATGTCT+GGG + chr3_4:8143545-8143564 Msa0488410:intron 25.0%
! AACAACAATCACATTTGATT+GGG - chr3_4:8143683-8143702 None:intergenic 25.0%
! AAACAACAATCACATTTGAT+TGG - chr3_4:8143684-8143703 None:intergenic 25.0%
!!! ATCAAATGTGATTGTTGTTT+TGG + chr3_4:8143684-8143703 Msa0488410:intron 25.0%
!! TTTAGTCTATTCAGTGTTTT+TGG + chr3_4:8143848-8143867 Msa0488410:intron 25.0%
!! TTAGTCTATTCAGTGTTTTT+GGG + chr3_4:8143849-8143868 Msa0488410:intron 25.0%
!! ATTTTATTCTTTTCTCCTGA+TGG + chr3_4:8144081-8144100 Msa0488410:intron 25.0%
! TGTAATATTGAGACATTCAA+TGG + chr3_4:8144163-8144182 Msa0488410:intron 25.0%
!! CAAGATTTAGAACTAGATAA+CGG - chr3_4:8144412-8144431 None:intergenic 25.0%
! TTCAAAGAAATACATGATAC+AGG - chr3_4:8144675-8144694 None:intergenic 25.0%
! TAATGTTCCAATATCTTGAA+TGG + chr3_4:8144832-8144851 Msa0488410:intron 25.0%
! AATGTTCCAATATCTTGAAT+GGG + chr3_4:8144833-8144852 Msa0488410:intron 25.0%
! CTTGTATAATCACTATAACA+AGG - chr3_4:8144879-8144898 None:intergenic 25.0%
!! CTTGTTATAGTGATTATACA+AGG + chr3_4:8144877-8144896 Msa0488410:intron 25.0%
!! AACTTAGCAATGTGATATTT+TGG + chr3_4:8145435-8145454 Msa0488410:intron 25.0%
!! ACTTAGCAATGTGATATTTT+GGG + chr3_4:8145436-8145455 Msa0488410:intron 25.0%
!!! ATTGAAATAAGCTCGTTTTT+GGG - chr3_4:8145712-8145731 None:intergenic 25.0%
!! TATTGAAATAAGCTCGTTTT+TGG - chr3_4:8145713-8145732 None:intergenic 25.0%
! TTTGATCTAAACTTTGATGT+AGG + chr3_4:8145872-8145891 Msa0488410:intron 25.0%
! ACACACTTATAACATATCTT+TGG + chr3_4:8146637-8146656 Msa0488410:CDS 25.0%
! ATTCATGGTGTAGATTATTA+TGG + chr3_4:8146663-8146682 Msa0488410:CDS 25.0%
!! TCCCTAATTTTTCTAACATA+TGG - chr3_4:8146888-8146907 None:intergenic 25.0%
! AAAATTAGGGATGAAAAGTA+TGG + chr3_4:8146897-8146916 Msa0488410:CDS 25.0%
!!! CACATGTTTTGAAAACATTT+TGG + chr3_4:8147302-8147321 Msa0488410:intron 25.0%
! TCTTGTCTACCTTAATATAT+AGG + chr3_4:8147327-8147346 Msa0488410:intron 25.0%
! AAATATATGCTGCTATCTAT+GGG + chr3_4:8147425-8147444 Msa0488410:intron 25.0%
! ATGATGTTTCATTTCACAAT+TGG + chr3_4:8147457-8147476 Msa0488410:intron 25.0%
! TGATGTTTCATTTCACAATT+GGG + chr3_4:8147458-8147477 Msa0488410:intron 25.0%
! AAGGGAACATATATAAACAA+GGG - chr3_4:8148103-8148122 None:intergenic 25.0%
! AAAGGGAACATATATAAACA+AGG - chr3_4:8148104-8148123 None:intergenic 25.0%
!! TGTTTATATATGTTCCCTTT+TGG + chr3_4:8148104-8148123 Msa0488410:intron 25.0%
!! TTGTTTCTTATATAAAGGAC+CGG - chr3_4:8148223-8148242 None:intergenic 25.0%
!!! AATTAATTTAGGGGTATTCA+TGG - chr3_4:8148326-8148345 None:intergenic 25.0%
! GGTCAATGTTTCTTATATAA+AGG + chr3_4:8148440-8148459 Msa0488410:intron 25.0%
!!! CACTTTTGTTTCTAGTAAAA+AGG + chr3_4:8148477-8148496 Msa0488410:intron 25.0%
! CAAAATGTCAATCAACTTTA+TGG - chr3_4:8148567-8148586 None:intergenic 25.0%
!!! CATAAAGTTGATTGACATTT+TGG + chr3_4:8148565-8148584 Msa0488410:intron 25.0%
!!! AGTATTTCTATTTTCTACTG+TGG + chr3_4:8148807-8148826 Msa0488410:intron 25.0%
!!! TCAATATGTTAGATAATGGA+TGG - chr3_4:8148873-8148892 None:intergenic 25.0%
! CAACTCAATATGTTAGATAA+TGG - chr3_4:8148877-8148896 None:intergenic 25.0%
! TTAAACTAATTTCCTAATCG+TGG + chr3_4:8148931-8148950 Msa0488410:intron 25.0%
! CTGTAATCTAGTTGTAATAA+TGG + chr3_4:8149097-8149116 Msa0488410:three_prime_UTR 25.0%
! GTAATCTAGTTGTAATAATG+GGG + chr3_4:8149099-8149118 Msa0488410:three_prime_UTR 25.0%
! TAATCTAGTTGTAATAATGG+GGG + chr3_4:8149100-8149119 Msa0488410:three_prime_UTR 25.0%
! TTCTAATGTTACAACATCTA+TGG - chr3_4:8149147-8149166 None:intergenic 25.0%
!!! GTTTTTTGATTTGAGGGTTT+GGG - chr3_4:8141324-8141343 None:intergenic 30.0%
!!! GGTTTGGTTTTTTGATTTGA+GGG - chr3_4:8141330-8141349 None:intergenic 30.0%
! ATGAAGAAATGAAATGGGTT+TGG - chr3_4:8141346-8141365 None:intergenic 30.0%
! GTGCAAGAAATTTTAGATTG+CGG + chr3_4:8141890-8141909 Msa0488410:intron 30.0%
! GTGCAAGAAATTTTAGATTG+CGG + chr3_4:8141890-8141909 Msa0488410:intron 30.0%
AGCCATTGTTTATAGTCATA+AGG + chr3_4:8142138-8142157 Msa0488410:intron 30.0%
TCAAATAAGTCAATCCAAAC+AGG - chr3_4:8142164-8142183 None:intergenic 30.0%
CTTGGAGAATTTATGAGATT+AGG - chr3_4:8142261-8142280 None:intergenic 30.0%
!! GTTGTTTTCATATGCTATCT+TGG - chr3_4:8142334-8142353 None:intergenic 30.0%
CTTACATAAGCCATTTCTAT+TGG - chr3_4:8142399-8142418 None:intergenic 30.0%
GATAAGTTGTTTATCCAAAC+AGG + chr3_4:8142451-8142470 Msa0488410:intron 30.0%
TAAGTTGTTTATCCAAACAG+GGG + chr3_4:8142453-8142472 Msa0488410:intron 30.0%
TAAATGAAATTGTGTGCCTA+TGG + chr3_4:8142498-8142517 Msa0488410:intron 30.0%
!! AGGGAGTACTTTATAATGAA+AGG + chr3_4:8142711-8142730 Msa0488410:intron 30.0%
!! TTTTCATGGGATTTGTTTGA+AGG + chr3_4:8142768-8142787 Msa0488410:intron 30.0%
! TCATGTATTTGATTGGTTGT+TGG + chr3_4:8142930-8142949 Msa0488410:intron 30.0%
AACATAGTTTCTGATGCATA+GGG - chr3_4:8143062-8143081 None:intergenic 30.0%
TAACATAGTTTCTGATGCAT+AGG - chr3_4:8143063-8143082 None:intergenic 30.0%
GAAATTGTACAGAAAATGTC+TGG + chr3_4:8143544-8143563 Msa0488410:intron 30.0%
GAAAGAACTAAAAATGACAC+CGG - chr3_4:8143917-8143936 None:intergenic 30.0%
TAAAAGGTTACTTCTTCAGA+CGG + chr3_4:8143968-8143987 Msa0488410:intron 30.0%
! GAAATAATTTGACTTCCATC+AGG - chr3_4:8144099-8144118 None:intergenic 30.0%
!!! TCAGTTTTGAATGACAAGAA+TGG - chr3_4:8144121-8144140 None:intergenic 30.0%
CTTGATCAATTAATTGGGAA+AGG + chr3_4:8144428-8144447 Msa0488410:intron 30.0%
ATAATTTACGTCACCCTAAA+AGG - chr3_4:8144503-8144522 None:intergenic 30.0%
ACAACTAATCTCATCAATGA+AGG + chr3_4:8144700-8144719 Msa0488410:intron 30.0%
GGTTATTGACAAACGAAATA+TGG + chr3_4:8144721-8144740 Msa0488410:intron 30.0%
ATCTTGCACTCTTAGTATAT+TGG - chr3_4:8144755-8144774 None:intergenic 30.0%
AAGTGGCAAATTGACAAAAT+GGG - chr3_4:8145162-8145181 None:intergenic 30.0%
CACATTATCTGTTTACTTTG+AGG + chr3_4:8145235-8145254 Msa0488410:intron 30.0%
CATTTGACTATCATTCATCT+AGG - chr3_4:8145345-8145364 None:intergenic 30.0%
CTAGATGAATGATAGTCAAA+TGG + chr3_4:8145343-8145362 Msa0488410:intron 30.0%
! CTTAGCAATGTGATATTTTG+GGG + chr3_4:8145437-8145456 Msa0488410:intron 30.0%
CTTGTGAATTATTTCAGAGA+GGG + chr3_4:8145481-8145500 Msa0488410:intron 30.0%
TTGTGAATTATTTCAGAGAG+GGG + chr3_4:8145482-8145501 Msa0488410:intron 30.0%
GAGCTAAGAAAAAACGTAAA+AGG - chr3_4:8145597-8145616 None:intergenic 30.0%
ATTGCAACATCATTCATCAA+TGG - chr3_4:8145645-8145664 None:intergenic 30.0%
TCAATTGAAATTTCAGCAGT+GGG - chr3_4:8145768-8145787 None:intergenic 30.0%
TAAAAGATTATGTGCCAGAT+AGG - chr3_4:8146071-8146090 None:intergenic 30.0%
! TATCTGGCACATAATCTTTT+AGG + chr3_4:8146070-8146089 Msa0488410:intron 30.0%
!!! TTTTTGCTTGATTTGCAAAG+TGG + chr3_4:8146126-8146145 Msa0488410:CDS 30.0%
ATATCTTCTTGTATCCTTCT+AGG - chr3_4:8146438-8146457 None:intergenic 30.0%
GATACAAGAAGATATTCATC+AGG + chr3_4:8146443-8146462 Msa0488410:CDS 30.0%
CACTTATAACATATCTTTGG+CGG + chr3_4:8146640-8146659 Msa0488410:CDS 30.0%
TGGAACTAACATCAAAATTG+CGG + chr3_4:8147018-8147037 Msa0488410:CDS 30.0%
! GTTTTCAAAACATGTGATCA+CGG - chr3_4:8147298-8147317 None:intergenic 30.0%
AGATAGCAGCATATATTTCA+AGG - chr3_4:8147423-8147442 None:intergenic 30.0%
GAAATATATGCTGCTATCTA+TGG + chr3_4:8147424-8147443 Msa0488410:intron 30.0%
AATATATGCTGCTATCTATG+GGG + chr3_4:8147426-8147445 Msa0488410:intron 30.0%
GACTTTGTGCAGAAATATAT+TGG - chr3_4:8147500-8147519 None:intergenic 30.0%
ATTTCTGCACAAAGTCATTA+TGG + chr3_4:8147504-8147523 Msa0488410:intron 30.0%
! ATGATTTGGAGATACCAAAA+GGG - chr3_4:8148121-8148140 None:intergenic 30.0%
! TATGATTTGGAGATACCAAA+AGG - chr3_4:8148122-8148141 None:intergenic 30.0%
!! TTATTTTATTGTACTCCCTC+CGG + chr3_4:8148201-8148220 Msa0488410:intron 30.0%
! CTATTTTCAATGTACTTCCT+TGG - chr3_4:8148265-8148284 None:intergenic 30.0%
AAAACCAAAACCAATTCTAC+TGG - chr3_4:8148598-8148617 None:intergenic 30.0%
!!! AGTAGAATTGGTTTTGGTTT+TGG + chr3_4:8148597-8148616 Msa0488410:intron 30.0%
!!! TTTTGGAACTGTTCTAACTT+GGG + chr3_4:8148614-8148633 Msa0488410:intron 30.0%
GAGTAAAAGATTATGCGTAT+AGG - chr3_4:8148660-8148679 None:intergenic 30.0%
AAGTTACTGTCATAGACTAT+CGG + chr3_4:8148988-8149007 Msa0488410:CDS 30.0%
AAAAATAAGATATAGCAGCC+AGG - chr3_4:8149191-8149210 None:intergenic 30.0%
TGTTGTGGATAATCAAACTA+TGG + chr3_4:8149350-8149369 Msa0488410:three_prime_UTR 30.0%
!!! GGTTTTTTGATTTGAGGGTT+TGG - chr3_4:8141325-8141344 None:intergenic 35.0%
!!! GGGTTTGGTTTTTTGATTTG+AGG - chr3_4:8141331-8141350 None:intergenic 35.0%
TTCTCTTCTCTCCATTTCTA+GGG + chr3_4:8141370-8141389 Msa0488410:five_prime_UTR 35.0%
ATGAATGGAAACCCTAGAAA+TGG - chr3_4:8141384-8141403 None:intergenic 35.0%
GTTTCCATTCATCTCTTCAA+TGG + chr3_4:8141392-8141411 Msa0488410:exon 35.0%
TTATGCAATTACCTGTCGTT+AGG - chr3_4:8141753-8141772 None:intergenic 35.0%
! GGCCTTATGACTATAAACAA+TGG - chr3_4:8142143-8142162 None:intergenic 35.0%
TTATAGTCATAAGGCCTGTT+TGG + chr3_4:8142147-8142166 Msa0488410:intron 35.0%
CAGAAACCATAAAAGTCCAT+AGG - chr3_4:8142517-8142536 None:intergenic 35.0%
TGCTTATATATATGACCGGA+GGG - chr3_4:8142576-8142595 None:intergenic 35.0%
TTGCTTATATATATGACCGG+AGG - chr3_4:8142577-8142596 None:intergenic 35.0%
! TCATTATAAAGTACTCCCTC+CGG - chr3_4:8142710-8142729 None:intergenic 35.0%
CACTGTTACTCAATCTTATC+TGG + chr3_4:8142862-8142881 Msa0488410:intron 35.0%
TGTTACTCAATCTTATCTGG+CGG + chr3_4:8142865-8142884 Msa0488410:intron 35.0%
! TGGCGGATCATTAAAAACAT+TGG + chr3_4:8142882-8142901 Msa0488410:intron 35.0%
TTTCTGATGCATAGGGTAAA+TGG - chr3_4:8143055-8143074 None:intergenic 35.0%
ATAACAAAGCAATTGGAGGA+GGG - chr3_4:8143093-8143112 None:intergenic 35.0%
TACGCACATAACAAAGCAAT+TGG - chr3_4:8143100-8143119 None:intergenic 35.0%
! CTTTGTTATGTGCGTAAAAC+AGG + chr3_4:8143104-8143123 Msa0488410:intron 35.0%
TTATGTGCGTAAAACAGGTT+TGG + chr3_4:8143109-8143128 Msa0488410:intron 35.0%
GGATATCAAAACGGAATTTC+TGG + chr3_4:8143226-8143245 Msa0488410:CDS 35.0%
! GTGTTGCATTTGTTACTTAC+TGG + chr3_4:8143442-8143461 Msa0488410:intron 35.0%
GAGCAAATCTTGGTTGTAAA+TGG - chr3_4:8143578-8143597 None:intergenic 35.0%
CACTAACTAACACTTGCTTA+GGG - chr3_4:8143606-8143625 None:intergenic 35.0%
CTAAGCAAGTGTTAGTTAGT+GGG + chr3_4:8143605-8143624 Msa0488410:intron 35.0%
! AAGTGTTAGTTAGTGGGTAT+AGG + chr3_4:8143611-8143630 Msa0488410:intron 35.0%
!!! CTATTCAGTGTTTTTGGGTT+TGG + chr3_4:8143854-8143873 Msa0488410:intron 35.0%
TAAATACCAAACAACAGCCA+GGG - chr3_4:8144376-8144395 None:intergenic 35.0%
ATAAATACCAAACAACAGCC+AGG - chr3_4:8144377-8144396 None:intergenic 35.0%
!!! TGGGTTTTATTTTGCAGATC+TGG + chr3_4:8144554-8144573 Msa0488410:intron 35.0%
AAGAAATACATGATACAGGC+AGG - chr3_4:8144671-8144690 None:intergenic 35.0%
TCCATAATCTCATCTCAAAG+CGG - chr3_4:8144942-8144961 None:intergenic 35.0%
GATGAGATTATGGATGTTCT+TGG + chr3_4:8144948-8144967 Msa0488410:intron 35.0%
TTTATCGCCATAGGAGAATT+GGG - chr3_4:8145008-8145027 None:intergenic 35.0%
ATTTATCGCCATAGGAGAAT+TGG - chr3_4:8145009-8145028 None:intergenic 35.0%
ATTCTCCTATGGCGATAAAT+AGG + chr3_4:8145009-8145028 Msa0488410:intron 35.0%
ATATGCCTATTTATCGCCAT+AGG - chr3_4:8145017-8145036 None:intergenic 35.0%
TATGGCGATAAATAGGCATA+TGG + chr3_4:8145016-8145035 Msa0488410:intron 35.0%
! AGTTGTTGTTAAGAAGACTG+AGG + chr3_4:8145097-8145116 Msa0488410:intron 35.0%
! GTTGTTGTTAAGAAGACTGA+GGG + chr3_4:8145098-8145117 Msa0488410:intron 35.0%
! TTGTTGTTAAGAAGACTGAG+GGG + chr3_4:8145099-8145118 Msa0488410:intron 35.0%
AGTGGCAAATTGACAAAATG+GGG - chr3_4:8145161-8145180 None:intergenic 35.0%
GAAGTGGCAAATTGACAAAA+TGG - chr3_4:8145163-8145182 None:intergenic 35.0%
TTGGGATTGTTTGAAAGAAG+TGG - chr3_4:8145179-8145198 None:intergenic 35.0%
AACAATCCCAAAGTCTTCTT+TGG + chr3_4:8145188-8145207 Msa0488410:intron 35.0%
! CTGTTTACTTTGAGGAAGAT+TGG + chr3_4:8145243-8145262 Msa0488410:intron 35.0%
AGTCAAATGGTTAGAGATAG+AGG + chr3_4:8145356-8145375 Msa0488410:intron 35.0%
GTCAAATGGTTAGAGATAGA+GGG + chr3_4:8145357-8145376 Msa0488410:intron 35.0%
GCTTGTGAATTATTTCAGAG+AGG + chr3_4:8145480-8145499 Msa0488410:intron 35.0%
! TATACTCTGACTTGTACTCT+TGG - chr3_4:8145683-8145702 None:intergenic 35.0%
AGCTTATTTCAATACCCACA+AGG + chr3_4:8145719-8145738 Msa0488410:CDS 35.0%
GTCAATTGAAATTTCAGCAG+TGG - chr3_4:8145769-8145788 None:intergenic 35.0%
ACCATTCATCAACGTAAAGA+GGG - chr3_4:8145992-8146011 None:intergenic 35.0%
TACCATTCATCAACGTAAAG+AGG - chr3_4:8145993-8146012 None:intergenic 35.0%
TGAATGGTAGAGAAATAGTC+AGG + chr3_4:8146004-8146023 Msa0488410:intron 35.0%
AAACACACATAAAGTGAGAG+AGG - chr3_4:8146176-8146195 None:intergenic 35.0%
! ATGTCTTCTTCTTTTACCAC+CGG - chr3_4:8146349-8146368 None:intergenic 35.0%
TAAAAGAAGAAGACATGGCA+GGG + chr3_4:8146353-8146372 Msa0488410:CDS 35.0%
AGAAGATATTCATCAGGTTC+AGG + chr3_4:8146449-8146468 Msa0488410:CDS 35.0%
GTAAGCTTGACAAGGAAAAA+GGG + chr3_4:8146481-8146500 Msa0488410:CDS 35.0%
CCTTAATAGATGTTAAGCCA+CGG - chr3_4:8146593-8146612 None:intergenic 35.0%
CGTGGCTTAACATCTATTAA+GGG + chr3_4:8146591-8146610 Msa0488410:CDS 35.0%
AACATCTATTAAGGGCTTAG+AGG + chr3_4:8146599-8146618 Msa0488410:CDS 35.0%
ACATCTATTAAGGGCTTAGA+GGG + chr3_4:8146600-8146619 Msa0488410:CDS 35.0%
!! TTGATTCATTTTGGCAGAGA+AGG + chr3_4:8146787-8146806 Msa0488410:CDS 35.0%
! TTAGGGATGAAAAGTATGGT+TGG + chr3_4:8146901-8146920 Msa0488410:CDS 35.0%
! GAAAAGTATGGTTGGAAGTA+TGG + chr3_4:8146909-8146928 Msa0488410:CDS 35.0%
! AAAAAGCTTTGTGCAACTCT+TGG - chr3_4:8146943-8146962 None:intergenic 35.0%
GGAACTAACATCAAAATTGC+GGG + chr3_4:8147019-8147038 Msa0488410:CDS 35.0%
TTAGTGGTTAATCTTGCAAG+TGG + chr3_4:8147104-8147123 Msa0488410:intron 35.0%
GGAAGAAAGAAAATGGAGAA+TGG - chr3_4:8147546-8147565 None:intergenic 35.0%
TAGAGAGGGAAGAAAGAAAA+TGG - chr3_4:8147553-8147572 None:intergenic 35.0%
CTTTCTTCCCTCTCTATTTA+AGG + chr3_4:8147557-8147576 Msa0488410:intron 35.0%
CATCGAACATTGTTTCATCA+CGG - chr3_4:8147719-8147738 None:intergenic 35.0%
GAAACAATGTTCGATGCATA+TGG + chr3_4:8147723-8147742 Msa0488410:CDS 35.0%
!! AAAGCTTTATTGAGGTTTGC+TGG + chr3_4:8147854-8147873 Msa0488410:intron 35.0%
TTCTTATATAAAGGACCGGA+GGG - chr3_4:8148219-8148238 None:intergenic 35.0%
TTTCTTATATAAAGGACCGG+AGG - chr3_4:8148220-8148239 None:intergenic 35.0%
GACATAAAACATCAAGACCA+AGG + chr3_4:8148245-8148264 Msa0488410:intron 35.0%
CTTCAAACATCCTTGAAACT+TGG + chr3_4:8148419-8148438 Msa0488410:intron 35.0%
GAAACATTGACCAAGTTTCA+AGG - chr3_4:8148432-8148451 None:intergenic 35.0%
! TTTCTAGTAAAAAGGACCGA+AGG + chr3_4:8148485-8148504 Msa0488410:intron 35.0%
!!! ACCGAAGGTAGTATTTTAAC+TGG + chr3_4:8148500-8148519 Msa0488410:intron 35.0%
GCCAGTTAAAATACTACCTT+CGG - chr3_4:8148504-8148523 None:intergenic 35.0%
GTCAATCAACTTTATGGAAC+TGG - chr3_4:8148561-8148580 None:intergenic 35.0%
!!! GTTTTGGAACTGTTCTAACT+TGG + chr3_4:8148613-8148632 Msa0488410:intron 35.0%
AAGATTATGCGTATAGGCAA+AGG - chr3_4:8148654-8148673 None:intergenic 35.0%
GTATGTGATTGACTGTTTAG+TGG + chr3_4:8148903-8148922 Msa0488410:intron 35.0%
TGACAGTAACTTCTTCTTCT+GGG - chr3_4:8148980-8148999 None:intergenic 35.0%
ATGACAGTAACTTCTTCTTC+TGG - chr3_4:8148981-8149000 None:intergenic 35.0%
TTGATTATCCACCAAAACCT+GGG - chr3_4:8149271-8149290 None:intergenic 35.0%
TTTGATTATCCACCAAAACC+TGG - chr3_4:8149272-8149291 None:intergenic 35.0%
! TGTTGTTGTTGTTGTTGTTG+TGG + chr3_4:8149326-8149345 Msa0488410:three_prime_UTR 35.0%
!! AATTATGTTGGCCTTGTATC+AGG + chr3_4:8149379-8149398 Msa0488410:three_prime_UTR 35.0%
ATAGGAAAAGACCTGATACA+AGG - chr3_4:8149393-8149412 None:intergenic 35.0%
! AGGTCTTTTCCTATTGTTTG+TGG + chr3_4:8149399-8149418 Msa0488410:three_prime_UTR 35.0%
CTTCTCTTCTCTCCATTTCT+AGG + chr3_4:8141369-8141388 Msa0488410:five_prime_UTR 40.0%
CTTCTAGATCTCTTATACGG+CGG - chr3_4:8141714-8141733 None:intergenic 40.0%
GCCGTATAAGAGATCTAGAA+GGG + chr3_4:8141713-8141732 Msa0488410:CDS 40.0%
CCCCTTCTAGATCTCTTATA+CGG - chr3_4:8141717-8141736 None:intergenic 40.0%
CCGTATAAGAGATCTAGAAG+GGG + chr3_4:8141714-8141733 Msa0488410:CDS 40.0%
ATATAACTTCTGCCCCTGTT+TGG - chr3_4:8142468-8142487 None:intergenic 40.0%
! TGTGTGCCTATGGACTTTTA+TGG + chr3_4:8142508-8142527 Msa0488410:intron 40.0%
AGGGAGTAGTCAGTTACAAT+TGG - chr3_4:8142557-8142576 None:intergenic 40.0%
TTGCTTATATATGTGACCGG+AGG + chr3_4:8142691-8142710 Msa0488410:intron 40.0%
TGCTTATATATGTGACCGGA+GGG + chr3_4:8142692-8142711 Msa0488410:intron 40.0%
CATAACAAAGCAATTGGAGG+AGG - chr3_4:8143094-8143113 None:intergenic 40.0%
GCACATAACAAAGCAATTGG+AGG - chr3_4:8143097-8143116 None:intergenic 40.0%
CCACTAACTAACACTTGCTT+AGG - chr3_4:8143607-8143626 None:intergenic 40.0%
CCTAAGCAAGTGTTAGTTAG+TGG + chr3_4:8143604-8143623 Msa0488410:intron 40.0%
GACAGTATGTTTCACACATC+TGG - chr3_4:8143756-8143775 None:intergenic 40.0%
!!! TTTTTGGGTTTGGCTACTTG+AGG + chr3_4:8143864-8143883 Msa0488410:intron 40.0%
! TTGAGGTAGCGATTTGAGAT+TGG + chr3_4:8143881-8143900 Msa0488410:intron 40.0%
AAACCACTGAACAGCAAACA+AGG - chr3_4:8144250-8144269 None:intergenic 40.0%
! TTGCTGTTCAGTGGTTTAAG+TGG + chr3_4:8144253-8144272 Msa0488410:intron 40.0%
TGCTGTTCAGTGGTTTAAGT+GGG + chr3_4:8144254-8144273 Msa0488410:intron 40.0%
TTCAGTGGTTTAAGTGGGTA+TGG + chr3_4:8144259-8144278 Msa0488410:intron 40.0%
TGGTTTAAGAATGCCATGCA+GGG - chr3_4:8144298-8144317 None:intergenic 40.0%
TTGGTTTAAGAATGCCATGC+AGG - chr3_4:8144299-8144318 None:intergenic 40.0%
AAATACCAAACAACAGCCAG+GGG - chr3_4:8144375-8144394 None:intergenic 40.0%
GTTATGCAGATTTGCCAAGT+GGG + chr3_4:8144589-8144608 Msa0488410:CDS 40.0%
TTATGCAGATTTGCCAAGTG+GGG + chr3_4:8144590-8144609 Msa0488410:CDS 40.0%
GTTCCAATATCTTGAATGGG+TGG + chr3_4:8144836-8144855 Msa0488410:intron 40.0%
AAGCCACCCATTCAAGATAT+TGG - chr3_4:8144842-8144861 None:intergenic 40.0%
!! ACCGCTTTGAGATGAGATTA+TGG + chr3_4:8144938-8144957 Msa0488410:intron 40.0%
GAGATTATGGATGTTCTTGG+AGG + chr3_4:8144951-8144970 Msa0488410:intron 40.0%
TTATCGCCATAGGAGAATTG+GGG - chr3_4:8145007-8145026 None:intergenic 40.0%
AGATAATGTGATAAAGCCCC+AGG - chr3_4:8145225-8145244 None:intergenic 40.0%
!! CTTTGAGGAAGATTGGTTTC+AGG + chr3_4:8145250-8145269 Msa0488410:intron 40.0%
!! AAGATTGGTTTCAGGCTCTA+TGG + chr3_4:8145258-8145277 Msa0488410:intron 40.0%
AAATGGTTAGAGATAGAGGG+AGG + chr3_4:8145360-8145379 Msa0488410:intron 40.0%
! CCACAGAAATCCTGATTTGT+GGG + chr3_4:8145383-8145402 Msa0488410:intron 40.0%
! AATCCTGATTTGTGGGATGA+TGG + chr3_4:8145390-8145409 Msa0488410:intron 40.0%
GTCCTATAAGCAATTCATCC+AGG + chr3_4:8145510-8145529 Msa0488410:CDS 40.0%
CTCCTGGATGAATTGCTTAT+AGG - chr3_4:8145515-8145534 None:intergenic 40.0%
GTATATCATCTTCAAGCTCC+TGG - chr3_4:8145531-8145550 None:intergenic 40.0%
TTTCAATACCCACAAGGATG+CGG + chr3_4:8145725-8145744 Msa0488410:CDS 40.0%
! TCCCTCTTTACGTTGATGAA+TGG + chr3_4:8145988-8146007 Msa0488410:intron 40.0%
! CTGGCACATAATCTTTTAGG+AGG + chr3_4:8146073-8146092 Msa0488410:intron 40.0%
GAATGAAAATGCTCGACGTT+TGG + chr3_4:8146095-8146114 Msa0488410:CDS 40.0%
AATGAATTTAGGCAAGCGTG+AGG - chr3_4:8146217-8146236 None:intergenic 40.0%
TCTGTTTCCTCCTCTGAATT+GGG - chr3_4:8146324-8146343 None:intergenic 40.0%
ATCTGTTTCCTCCTCTGAAT+TGG - chr3_4:8146325-8146344 None:intergenic 40.0%
GGTGGTAAAAGAAGAAGACA+TGG + chr3_4:8146348-8146367 Msa0488410:CDS 40.0%
GTAAAAGAAGAAGACATGGC+AGG + chr3_4:8146352-8146371 Msa0488410:CDS 40.0%
AAAAGAAGAAGACATGGCAG+GGG + chr3_4:8146354-8146373 Msa0488410:CDS 40.0%
TTCTAGGTTCAGAACTGACA+GGG - chr3_4:8146422-8146441 None:intergenic 40.0%
TGTTGTTCGTAAGCTTGACA+AGG + chr3_4:8146473-8146492 Msa0488410:CDS 40.0%
CGTAAGCTTGACAAGGAAAA+AGG + chr3_4:8146480-8146499 Msa0488410:CDS 40.0%
AGCCACGGATAATTACTACA+GGG - chr3_4:8146578-8146597 None:intergenic 40.0%
AAGCCACGGATAATTACTAC+AGG - chr3_4:8146579-8146598 None:intergenic 40.0%
CCGTGGCTTAACATCTATTA+AGG + chr3_4:8146590-8146609 Msa0488410:CDS 40.0%
!! ACATATCTTTGGCGGATTCA+TGG + chr3_4:8146648-8146667 Msa0488410:CDS 40.0%
! CTAGTGATGCCAAAGGTTTT+AGG + chr3_4:8146697-8146716 Msa0488410:CDS 40.0%
TCTCACATGCCTAAAACCTT+TGG - chr3_4:8146709-8146728 None:intergenic 40.0%
GCATGAAGAAACAGCTAAGT+CGG + chr3_4:8146743-8146762 Msa0488410:CDS 40.0%
CATGAAGAAACAGCTAAGTC+GGG + chr3_4:8146744-8146763 Msa0488410:CDS 40.0%
ATGAAGAAACAGCTAAGTCG+GGG + chr3_4:8146745-8146764 Msa0488410:CDS 40.0%
!! TTCATTTTGGCAGAGAAGGT+TGG + chr3_4:8146791-8146810 Msa0488410:CDS 40.0%
TTTGCAGTCCTTACTTCCAA+GGG - chr3_4:8146828-8146847 None:intergenic 40.0%
TTAGTTCCAACACAAGCTCT+GGG - chr3_4:8147007-8147026 None:intergenic 40.0%
CATCAGGATCACTACAATGA+AGG - chr3_4:8147159-8147178 None:intergenic 40.0%
TACAAGCAACTTTGCAGATG+TGG + chr3_4:8147354-8147373 Msa0488410:intron 40.0%
GGCTTGTCCTTAAATAGAGA+GGG - chr3_4:8147567-8147586 None:intergenic 40.0%
AGGCTTGTCCTTAAATAGAG+AGG - chr3_4:8147568-8147587 None:intergenic 40.0%
TCCAGTAACCTTCGCTTTAA+AGG - chr3_4:8147588-8147607 None:intergenic 40.0%
TTAAAGCGAAGGTTACTGGA+AGG + chr3_4:8147588-8147607 Msa0488410:CDS 40.0%
TCCCACGATCATCTTTCAAT+CGG - chr3_4:8147614-8147633 None:intergenic 40.0%
TGAAAGATGATCGTGGGAAT+CGG + chr3_4:8147616-8147635 Msa0488410:CDS 40.0%
ACAATGTTCGATGCATATGG+TGG + chr3_4:8147726-8147745 Msa0488410:CDS 40.0%
! TCTGAGTTGAATGATACAGC+AGG - chr3_4:8147753-8147772 None:intergenic 40.0%
AAGTAAAAGAGCAACCAACC+CGG - chr3_4:8147814-8147833 None:intergenic 40.0%
TTTATACCTATTCAGGCCTC+TGG + chr3_4:8147888-8147907 Msa0488410:intron 40.0%
TTATACCTATTCAGGCCTCT+GGG + chr3_4:8147889-8147908 Msa0488410:intron 40.0%
AAGTTGCGATGCAGATGTTT+AGG + chr3_4:8147935-8147954 Msa0488410:CDS 40.0%
AGTTGCGATGCAGATGTTTA+GGG + chr3_4:8147936-8147955 Msa0488410:CDS 40.0%
ATGCAGATGTTTAGGGATCA+AGG + chr3_4:8147943-8147962 Msa0488410:CDS 40.0%
!! CTCTCCAGTAGAATTGGTTT+TGG + chr3_4:8148591-8148610 Msa0488410:intron 40.0%
! TTGATAACTGCACCACGATT+AGG - chr3_4:8148946-8148965 None:intergenic 40.0%
GACAGTAACTTCTTCTTCTG+GGG - chr3_4:8148979-8148998 None:intergenic 40.0%
TTGGCTCATTGAGATTGGAT+TGG + chr3_4:8149031-8149050 Msa0488410:three_prime_UTR 40.0%
TCAATCAAAAACTACCTCCC+AGG + chr3_4:8149251-8149270 Msa0488410:three_prime_UTR 40.0%
! AAAAACTACCTCCCAGGTTT+TGG + chr3_4:8149257-8149276 Msa0488410:three_prime_UTR 40.0%
TATATTCCGATCCCACTTAG+TGG + chr3_4:8149293-8149312 Msa0488410:three_prime_UTR 40.0%
ATATTCCGATCCCACTTAGT+GGG + chr3_4:8149294-8149313 Msa0488410:three_prime_UTR 40.0%
! AAAGCCTTATCCCACTAAGT+GGG - chr3_4:8149307-8149326 None:intergenic 40.0%
CACTGACATCCACAAACAAT+AGG - chr3_4:8149411-8149430 None:intergenic 40.0%
TTTGACCTGGATTAAAACCC+AGG - chr3_4:8149435-8149454 None:intergenic 40.0%
GGGTAGTTTACAATTTGACC+TGG - chr3_4:8149448-8149467 None:intergenic 40.0%
TCGGCCATTGAAGAGATGAA+TGG - chr3_4:8141399-8141418 None:intergenic 45.0%
GGCGTTTGATGTCTCTATCA+CGG - chr3_4:8141620-8141639 None:intergenic 45.0%
CGCCGTATAAGAGATCTAGA+AGG + chr3_4:8141712-8141731 Msa0488410:CDS 45.0%
TACCTGTCGTTAGGTCTATG+AGG - chr3_4:8141744-8141763 None:intergenic 45.0%
TTGTAACTGACTACTCCCTC+CGG + chr3_4:8142558-8142577 Msa0488410:intron 45.0%
AGGTTTGGCCATGATCACTT+CGG + chr3_4:8143124-8143143 Msa0488410:intron 45.0%
ATCACTTCGGTGGCTATGAA+CGG + chr3_4:8143137-8143156 Msa0488410:CDS 45.0%
TATGCAGATGATAGACCTGG+TGG + chr3_4:8143178-8143197 Msa0488410:CDS 45.0%
AGATTTCCACATCGATCTGG+AGG + chr3_4:8143202-8143221 Msa0488410:CDS 45.0%
GATTTCCACATCGATCTGGA+GGG + chr3_4:8143203-8143222 Msa0488410:CDS 45.0%
ATTTCCACATCGATCTGGAG+GGG + chr3_4:8143204-8143223 Msa0488410:CDS 45.0%
TCTGGAGGGGGATATCAAAA+CGG + chr3_4:8143217-8143236 Msa0488410:CDS 45.0%
TAGGGAGCAAGAGCAAATCT+TGG - chr3_4:8143588-8143607 None:intergenic 45.0%
GTGTGCAGCAACTCAGATTA+GGG - chr3_4:8143652-8143671 None:intergenic 45.0%
AGTGTGCAGCAACTCAGATT+AGG - chr3_4:8143653-8143672 None:intergenic 45.0%
! TGAGATTGGTCACTATGCTC+CGG + chr3_4:8143895-8143914 Msa0488410:intron 45.0%
!! TGTCCTTGTTTGCTGTTCAG+TGG + chr3_4:8144244-8144263 Msa0488410:intron 45.0%
GGTTTAAGAATGCCATGCAG+GGG - chr3_4:8144297-8144316 None:intergenic 45.0%
ATTCTCTCCCCACCTCTTAA+TGG + chr3_4:8144332-8144351 Msa0488410:intron 45.0%
AAACACACCCCTCCATTAAG+AGG - chr3_4:8144347-8144366 None:intergenic 45.0%
AATACCAAACAACAGCCAGG+GGG - chr3_4:8144374-8144393 None:intergenic 45.0%
CAAATCTGCATAACCGCGAT+TGG - chr3_4:8144583-8144602 None:intergenic 45.0%
GGTTATGCAGATTTGCCAAG+TGG + chr3_4:8144588-8144607 Msa0488410:CDS 45.0%
TATGCAGATTTGCCAAGTGG+GGG + chr3_4:8144591-8144610 Msa0488410:CDS 45.0%
AGTAGCACTCAACAGAGATC+TGG - chr3_4:8144909-8144928 None:intergenic 45.0%
TCTTGGAGGAATTTGACGTG+CGG + chr3_4:8144965-8144984 Msa0488410:intron 45.0%
TGAACACCCCAATTCTCCTA+TGG + chr3_4:8144998-8145017 Msa0488410:intron 45.0%
TCCAAACAAATGCTCTCTGC+AGG + chr3_4:8145047-8145066 Msa0488410:intron 45.0%
CCAAACAAATGCTCTCTGCA+GGG + chr3_4:8145048-8145067 Msa0488410:intron 45.0%
CAGCTGCCAAAGAAGACTTT+GGG - chr3_4:8145197-8145216 None:intergenic 45.0%
CAAAGTCTTCTTTGGCAGCT+GGG + chr3_4:8145196-8145215 Msa0488410:intron 45.0%
AAAGTCTTCTTTGGCAGCTG+GGG + chr3_4:8145197-8145216 Msa0488410:intron 45.0%
! ATTGGTTTCAGGCTCTATGG+AGG + chr3_4:8145261-8145280 Msa0488410:intron 45.0%
! GCCACAGAAATCCTGATTTG+TGG + chr3_4:8145382-8145401 Msa0488410:intron 45.0%
CCCACAAATCAGGATTTCTG+TGG - chr3_4:8145386-8145405 None:intergenic 45.0%
CAACCATCATCCCACAAATC+AGG - chr3_4:8145396-8145415 None:intergenic 45.0%
AAATGCTCGACGTTTGGCAA+AGG + chr3_4:8146101-8146120 Msa0488410:CDS 45.0%
GTGGATGCAGAGTTTAAACC+TGG - chr3_4:8146279-8146298 None:intergenic 45.0%
!! ACTGGCTTGCTCTGATTTAG+TGG - chr3_4:8146298-8146317 None:intergenic 45.0%
ACATGGCAGGGGATCTAATA+AGG + chr3_4:8146365-8146384 Msa0488410:CDS 45.0%
CTTCTAGGTTCAGAACTGAC+AGG - chr3_4:8146423-8146442 None:intergenic 45.0%
!! CTGTCAGTTCTGAACCTAGA+AGG + chr3_4:8146421-8146440 Msa0488410:CDS 45.0%
AATAGTGATAAGGCTCGCAG+TGG + chr3_4:8146543-8146562 Msa0488410:CDS 45.0%
CTTGAGACTAGTGATGCCAA+AGG + chr3_4:8146690-8146709 Msa0488410:CDS 45.0%
TTTAGGCATGTGAGACCAGA+AGG + chr3_4:8146714-8146733 Msa0488410:CDS 45.0%
CTTTGCAGTCCTTACTTCCA+AGG - chr3_4:8146829-8146848 None:intergenic 45.0%
CTTGGAAGTAAGGACTGCAA+AGG + chr3_4:8146827-8146846 Msa0488410:CDS 45.0%
! TATGGTTGGAAGTATGGCTG+TGG + chr3_4:8146915-8146934 Msa0488410:CDS 45.0%
AAAACACCCAGAGCTTGTGT+TGG + chr3_4:8146998-8147017 Msa0488410:CDS 45.0%
GTTAGTTCCAACACAAGCTC+TGG - chr3_4:8147008-8147027 None:intergenic 45.0%
GTGGTTAATCTTGCAAGTGG+TGG + chr3_4:8147107-8147126 Msa0488410:intron 45.0%
GTTAATCTTGCAAGTGGTGG+TGG + chr3_4:8147110-8147129 Msa0488410:intron 45.0%
TGCAGCAATCTCAGGTAGAA+TGG + chr3_4:8147200-8147219 Msa0488410:intron 45.0%
!! AGGACAAGCCTTTAAAGCGA+AGG + chr3_4:8147577-8147596 Msa0488410:intron 45.0%
!! GCCTTTAAAGCGAAGGTTAC+TGG + chr3_4:8147584-8147603 Msa0488410:CDS 45.0%
GCCGATTGAAAGATGATCGT+GGG + chr3_4:8147610-8147629 Msa0488410:CDS 45.0%
GATAGGAGCGACAGAACAAA+TGG + chr3_4:8147648-8147667 Msa0488410:CDS 45.0%
AACATCTGCATCGCAACTTC+TGG - chr3_4:8147934-8147953 None:intergenic 45.0%
! CCTGATGGATCATACGAAGA+TGG - chr3_4:8147970-8147989 None:intergenic 45.0%
CCATCTTCGTATGATCCATC+AGG + chr3_4:8147967-8147986 Msa0488410:CDS 45.0%
TGCATGCACTAAGCATTCTG+AGG - chr3_4:8148526-8148545 None:intergenic 45.0%
GTGGTGCAGTTATCAAGACT+TGG + chr3_4:8148950-8148969 Msa0488410:intron 45.0%
CATAGACTATCGGAGCTTGT+AGG + chr3_4:8148998-8149017 Msa0488410:CDS 45.0%
! GCTTGTAGGTTTCACTGGTT+TGG + chr3_4:8149012-8149031 Msa0488410:exon 45.0%
!! CTGGTTTGGCTCATTGAGAT+TGG + chr3_4:8149026-8149045 Msa0488410:three_prime_UTR 45.0%
ATTATCCACCAAAACCTGGG+AGG - chr3_4:8149268-8149287 None:intergenic 45.0%
CTTATCCCACTAAGTGGGAT+CGG - chr3_4:8149302-8149321 None:intergenic 45.0%
! CAAAGCCTTATCCCACTAAG+TGG - chr3_4:8149308-8149327 None:intergenic 45.0%
TTTGTGGATGTCAGTGACCT+GGG + chr3_4:8149415-8149434 Msa0488410:three_prime_UTR 45.0%
!! AGTGACCTGGGTTTTAATCC+AGG + chr3_4:8149427-8149446 Msa0488410:three_prime_UTR 45.0%
!! ACAAAATATTAAAATATTAT+AGG + chr3_4:8145072-8145091 Msa0488410:intron 5.0%
! GAGAGGGAGGTTTTCGACTT+CGG - chr3_4:8141418-8141437 None:intergenic 50.0%
ATCGGTCGTGAGATTCGAGA+GGG - chr3_4:8141434-8141453 None:intergenic 50.0%
CGAAATCTCTGTCGTCACGA+CGG - chr3_4:8141539-8141558 None:intergenic 50.0%
AGTTAGGGCTAGGACTACGA+CGG - chr3_4:8141641-8141660 None:intergenic 50.0%
CTAGATCTCTTATACGGCGG+AGG - chr3_4:8141711-8141730 None:intergenic 50.0%
GTCCTCATAGACCTAACGAC+AGG + chr3_4:8141739-8141758 Msa0488410:CDS 50.0%
TTTGGCCATGATCACTTCGG+TGG + chr3_4:8143127-8143146 Msa0488410:CDS 50.0%
CATAGCCACCGAAGTGATCA+TGG - chr3_4:8143135-8143154 None:intergenic 50.0%
TCACTTCGGTGGCTATGAAC+GGG + chr3_4:8143138-8143157 Msa0488410:CDS 50.0%
GGCTATGCAGATGATAGACC+TGG + chr3_4:8143175-8143194 Msa0488410:CDS 50.0%
GGCAGATTTCCACATCGATC+TGG + chr3_4:8143199-8143218 Msa0488410:CDS 50.0%
TTTCCACATCGATCTGGAGG+GGG + chr3_4:8143205-8143224 Msa0488410:CDS 50.0%
TCTCCCCACCTCTTAATGGA+GGG + chr3_4:8144336-8144355 Msa0488410:intron 50.0%
ACACCCCTCCATTAAGAGGT+GGG - chr3_4:8144343-8144362 None:intergenic 50.0%
CTTGGAGGAATTTGACGTGC+GGG + chr3_4:8144966-8144985 Msa0488410:intron 50.0%
TTGGAGGAATTTGACGTGCG+GGG + chr3_4:8144967-8144986 Msa0488410:intron 50.0%
!! CCCTGCAGAGAGCATTTGTT+TGG - chr3_4:8145051-8145070 None:intergenic 50.0%
ACTGAGGGGCTGTTTGAAAG+CGG + chr3_4:8145113-8145132 Msa0488410:intron 50.0%
CCAGCTGCCAAAGAAGACTT+TGG - chr3_4:8145198-8145217 None:intergenic 50.0%
CCAAAGTCTTCTTTGGCAGC+TGG + chr3_4:8145195-8145214 Msa0488410:intron 50.0%
AAGTCTTCTTTGGCAGCTGG+GGG + chr3_4:8145198-8145217 Msa0488410:intron 50.0%
TACCTACGCTCAGCTTCAGA+TGG - chr3_4:8145556-8145575 None:intergenic 50.0%
ATACCACTCCGCATCCTTGT+GGG - chr3_4:8145736-8145755 None:intergenic 50.0%
GAATTTAGGCAAGCGTGAGG+AGG - chr3_4:8146214-8146233 None:intergenic 50.0%
TCAGAGGAGGAAACAGATGC+CGG + chr3_4:8146327-8146346 Msa0488410:CDS 50.0%
GGCCCTGTAGTAATTATCCG+TGG + chr3_4:8146573-8146592 Msa0488410:CDS 50.0%
!! CTTAGAGGGTGTTGAGCTAC+TGG + chr3_4:8146614-8146633 Msa0488410:CDS 50.0%
ATGTGAGACCAGAAGGAGCA+AGG + chr3_4:8146721-8146740 Msa0488410:CDS 50.0%
TCTTCATGCCTTGCTCCTTC+TGG - chr3_4:8146732-8146751 None:intergenic 50.0%
AGCTAAGTCGGGGTCAGAAT+GGG + chr3_4:8146755-8146774 Msa0488410:CDS 50.0%
TCCTTACTTCCAAGGGATCC+AGG - chr3_4:8146821-8146840 None:intergenic 50.0%
TGTAGTGATCCTGATGCTCC+TGG + chr3_4:8147163-8147182 Msa0488410:intron 50.0%
ACCTGAGATTGCTGCATGAC+AGG - chr3_4:8147196-8147215 None:intergenic 50.0%
GGCCGATTGAAAGATGATCG+TGG + chr3_4:8147609-8147628 Msa0488410:CDS 50.0%
TTGTTCTGTCGCTCCTATCC+TGG - chr3_4:8147647-8147666 None:intergenic 50.0%
GTTTCCCAACTGCCTCTCAT+GGG - chr3_4:8147697-8147716 None:intergenic 50.0%
AGGCATCAAAACTGGAGGAG+GGG - chr3_4:8147781-8147800 None:intergenic 50.0%
CAGGCATCAAAACTGGAGGA+GGG - chr3_4:8147782-8147801 None:intergenic 50.0%
ACAGGCATCAAAACTGGAGG+AGG - chr3_4:8147783-8147802 None:intergenic 50.0%
GGTACAGGCATCAAAACTGG+AGG - chr3_4:8147786-8147805 None:intergenic 50.0%
CCAGGTACAGGCATCAAAAC+TGG - chr3_4:8147789-8147808 None:intergenic 50.0%
!! CCAGTTTTGATGCCTGTACC+TGG + chr3_4:8147786-8147805 Msa0488410:CDS 50.0%
TCTGGTGGAGCAGGAACAAA+GGG - chr3_4:8147916-8147935 None:intergenic 50.0%
TTCTGGTGGAGCAGGAACAA+AGG - chr3_4:8147917-8147936 None:intergenic 50.0%
ATCTGCATCGCAACTTCTGG+TGG - chr3_4:8147931-8147950 None:intergenic 50.0%
GAACGCATCGTCATTCCTGA+TGG - chr3_4:8147985-8148004 None:intergenic 50.0%
TCAGGAATGACGATGCGTTC+TGG + chr3_4:8147985-8148004 Msa0488410:CDS 50.0%
ATGCGTTCTGGTCCTCACAT+AGG + chr3_4:8147997-8148016 Msa0488410:CDS 50.0%
TGCGTTCTGGTCCTCACATA+GGG + chr3_4:8147998-8148017 Msa0488410:CDS 50.0%
GGGAGGAACAGCAATCATAG+AGG - chr3_4:8148031-8148050 None:intergenic 50.0%
ATAAGTACCTCCGCATCCGT+CGG - chr3_4:8148071-8148090 None:intergenic 50.0%
TGGGTGCTCTCCAGTAGAAT+TGG + chr3_4:8148585-8148604 Msa0488410:intron 50.0%
TCGGAGCTTGTAGGTTTCAC+TGG + chr3_4:8149007-8149026 Msa0488410:exon 50.0%
TTCCCGAGCAAAATGCTACC+TGG + chr3_4:8149170-8149189 Msa0488410:three_prime_UTR 50.0%
! AGCCAGGTAGCATTTTGCTC+GGG - chr3_4:8149175-8149194 None:intergenic 50.0%
! CAGCCAGGTAGCATTTTGCT+CGG - chr3_4:8149176-8149195 None:intergenic 50.0%
!! AACTACCTCCCAGGTTTTGG+TGG + chr3_4:8149260-8149279 Msa0488410:three_prime_UTR 50.0%
CGATCCCACTTAGTGGGATA+AGG + chr3_4:8149300-8149319 Msa0488410:three_prime_UTR 50.0%
GTTTGTGGATGTCAGTGACC+TGG + chr3_4:8149414-8149433 Msa0488410:three_prime_UTR 50.0%
GATCGGTCGTGAGATTCGAG+AGG - chr3_4:8141435-8141454 None:intergenic 55.0%
AAATCGCGACGACGAGGGTT+GGG - chr3_4:8141513-8141532 None:intergenic 55.0%
AAAATCGCGACGACGAGGGT+TGG - chr3_4:8141514-8141533 None:intergenic 55.0%
GGTCAAAATCGCGACGACGA+GGG - chr3_4:8141518-8141537 None:intergenic 55.0%
TGTAGTAACCACCTCCACCG+CGG - chr3_4:8141593-8141612 None:intergenic 55.0%
CGGTCACGATAGTTAGGGCT+AGG - chr3_4:8141651-8141670 None:intergenic 55.0%
AGCGGCGGTCACGATAGTTA+GGG - chr3_4:8141656-8141675 None:intergenic 55.0%
TAGCGGCGGTCACGATAGTT+AGG - chr3_4:8141657-8141676 None:intergenic 55.0%
CACTTCGGTGGCTATGAACG+GGG + chr3_4:8143139-8143158 Msa0488410:CDS 55.0%
CTATGAACGGGGAGGTGGAA+GGG + chr3_4:8143150-8143169 Msa0488410:CDS 55.0%
TATGAACGGGGAGGTGGAAG+GGG + chr3_4:8143151-8143170 Msa0488410:CDS 55.0%
CGATGTGGAAATCTGCCACC+AGG - chr3_4:8143196-8143215 None:intergenic 55.0%
TATCCCCCTCCAGATCGATG+TGG - chr3_4:8143211-8143230 None:intergenic 55.0%
TTTCTCTCACGTCCCCTGCA+TGG + chr3_4:8144282-8144301 Msa0488410:intron 55.0%
CTCTCCCCACCTCTTAATGG+AGG + chr3_4:8144335-8144354 Msa0488410:intron 55.0%
CTCCCCACCTCTTAATGGAG+GGG + chr3_4:8144337-8144356 Msa0488410:intron 55.0%
CACCCCTCCATTAAGAGGTG+GGG - chr3_4:8144342-8144361 None:intergenic 55.0%
CACACCCCTCCATTAAGAGG+TGG - chr3_4:8144344-8144363 None:intergenic 55.0%
GCAGATCTGGATGCCAATCG+CGG + chr3_4:8144567-8144586 Msa0488410:intron 55.0%
TGGAGGAATTTGACGTGCGG+GGG + chr3_4:8144968-8144987 Msa0488410:intron 55.0%
AGTCTTCTTTGGCAGCTGGG+GGG + chr3_4:8145199-8145218 Msa0488410:intron 55.0%
GGTTTCAGGCTCTATGGAGG+AGG + chr3_4:8145264-8145283 Msa0488410:intron 55.0%
! TGCCATCTGAAGCTGAGCGT+AGG + chr3_4:8145551-8145570 Msa0488410:CDS 55.0%
ATACCCACAAGGATGCGGAG+TGG + chr3_4:8145730-8145749 Msa0488410:CDS 55.0%
CATACCACTCCGCATCCTTG+TGG - chr3_4:8145737-8145756 None:intergenic 55.0%
CAAGCGTGAGGAGGAAGAGA+AGG - chr3_4:8146205-8146224 None:intergenic 55.0%
AGCCAGTGAGCCCAATTCAG+AGG + chr3_4:8146311-8146330 Msa0488410:CDS 55.0%
CTCCTCTGAATTGGGCTCAC+TGG - chr3_4:8146316-8146335 None:intergenic 55.0%
CAGTGAGCCCAATTCAGAGG+AGG + chr3_4:8146314-8146333 Msa0488410:CDS 55.0%
CGATTTCTCTGCTGCTCCGA+AGG + chr3_4:8146392-8146411 Msa0488410:CDS 55.0%
GAACTGACAGGGTGAGCCTT+CGG - chr3_4:8146411-8146430 None:intergenic 55.0%
TAAGGCTCGCAGTGGATCTG+TGG + chr3_4:8146551-8146570 Msa0488410:CDS 55.0%
AAGGCTCGCAGTGGATCTGT+GGG + chr3_4:8146552-8146571 Msa0488410:CDS 55.0%
CAGCTAAGTCGGGGTCAGAA+TGG + chr3_4:8146754-8146773 Msa0488410:CDS 55.0%
GCCTGGATCCCTTGGAAGTA+AGG + chr3_4:8146817-8146836 Msa0488410:CDS 55.0%
TGCTGCAGCAGCTGACATGT+TGG + chr3_4:8146860-8146879 Msa0488410:CDS 55.0%
AGTGATCCTGATGCTCCTGG+TGG + chr3_4:8147166-8147185 Msa0488410:intron 55.0%
GCCTGTCATGCAGCAATCTC+AGG + chr3_4:8147192-8147211 Msa0488410:CDS 55.0%
TCATGGGATGGCGAACTGTC+AGG - chr3_4:8147681-8147700 None:intergenic 55.0%
ACAGTTCGCCATCCCATGAG+AGG + chr3_4:8147682-8147701 Msa0488410:CDS 55.0%
CCATCCCATGAGAGGCAGTT+GGG + chr3_4:8147690-8147709 Msa0488410:CDS 55.0%
GGTTTCCCAACTGCCTCTCA+TGG - chr3_4:8147698-8147717 None:intergenic 55.0%
GGCATCAAAACTGGAGGAGG+GGG - chr3_4:8147780-8147799 None:intergenic 55.0%
TTGATGCCTGTACCTGGTGC+CGG + chr3_4:8147792-8147811 Msa0488410:CDS 55.0%
ATCGCAACTTCTGGTGGAGC+AGG - chr3_4:8147925-8147944 None:intergenic 55.0%
GCGTTCTGGTCCTCACATAG+GGG + chr3_4:8147999-8148018 Msa0488410:CDS 55.0%
CGTTCTGGTCCTCACATAGG+GGG + chr3_4:8148000-8148019 Msa0488410:CDS 55.0%
GGATCAGGTCTAAAGGTGGG+AGG - chr3_4:8148048-8148067 None:intergenic 55.0%
CGGGGATCAGGTCTAAAGGT+GGG - chr3_4:8148051-8148070 None:intergenic 55.0%
TCGGGGATCAGGTCTAAAGG+TGG - chr3_4:8148052-8148071 None:intergenic 55.0%
CCTTTAGACCTGATCCCCGA+CGG + chr3_4:8148052-8148071 Msa0488410:CDS 55.0%
TAAGTACCTCCGCATCCGTC+GGG - chr3_4:8148070-8148089 None:intergenic 55.0%
GGTCGTGAGATTCGAGAGGG+AGG - chr3_4:8141431-8141450 None:intergenic 60.0%
! GAGCGGTGGTGGTTGGAGAT+CGG - chr3_4:8141452-8141471 None:intergenic 60.0%
AGATCGTCGTCAGGAGGAGG+TGG - chr3_4:8141474-8141493 None:intergenic 60.0%
GGTTGGGGTTAGGTGGAGGT+GGG - chr3_4:8141497-8141516 None:intergenic 60.0%
AATCGCGACGACGAGGGTTG+GGG - chr3_4:8141512-8141531 None:intergenic 60.0%
CGGTCAAAATCGCGACGACG+AGG - chr3_4:8141519-8141538 None:intergenic 60.0%
GCTGCGGAGGAGGAGAATAG+CGG - chr3_4:8141674-8141693 None:intergenic 60.0%
GGAGAACGACGAGACTGCTG+CGG - chr3_4:8141690-8141709 None:intergenic 60.0%
TTCGGTGGCTATGAACGGGG+AGG + chr3_4:8143142-8143161 Msa0488410:CDS 60.0%
GCTATGAACGGGGAGGTGGA+AGG + chr3_4:8143149-8143168 Msa0488410:CDS 60.0%
GTGTCCCCCTGGCTGTTGTT+TGG + chr3_4:8144367-8144386 Msa0488410:intron 60.0%
GAGGGGCTGTTTGAAAGCGG+TGG + chr3_4:8145116-8145135 Msa0488410:intron 60.0%
GAGGAGGAAACAGATGCCGG+TGG + chr3_4:8146330-8146349 Msa0488410:CDS 60.0%
GCAGAGAAGGTTGGACAGCC+TGG + chr3_4:8146800-8146819 Msa0488410:CDS 60.0%
GTTGGACAGCCTGGATCCCT+TGG + chr3_4:8146809-8146828 Msa0488410:CDS 60.0%
TGCATGACAGGCGTTCCACC+AGG - chr3_4:8147184-8147203 None:intergenic 60.0%
GGAATCGGCGAGACCAGGAT+AGG + chr3_4:8147631-8147650 Msa0488410:CDS 60.0%
GCCATCCCATGAGAGGCAGT+TGG + chr3_4:8147689-8147708 Msa0488410:CDS 60.0%
CCCAACTGCCTCTCATGGGA+TGG - chr3_4:8147693-8147712 None:intergenic 60.0%
TGATGCCTGTACCTGGTGCC+GGG + chr3_4:8147793-8147812 Msa0488410:CDS 60.0%
AGGGTCCCAGAGGCCTGAAT+AGG - chr3_4:8147897-8147916 None:intergenic 60.0%
GCAGGAACAAAGGGTCCCAG+AGG - chr3_4:8147907-8147926 None:intergenic 60.0%
GAGGCTTGTCCCCCTATGTG+AGG - chr3_4:8148012-8148031 None:intergenic 60.0%
CCGTCGGGGATCAGGTCTAA+AGG - chr3_4:8148055-8148074 None:intergenic 60.0%
AAGTACCTCCGCATCCGTCG+GGG - chr3_4:8148069-8148088 None:intergenic 60.0%
GTCGTCAGGAGGAGGTGGAG+CGG - chr3_4:8141469-8141488 None:intergenic 65.0%
GGGAGATCGTCGTCAGGAGG+AGG - chr3_4:8141477-8141496 None:intergenic 65.0%
GGTGGGAGATCGTCGTCAGG+AGG - chr3_4:8141480-8141499 None:intergenic 65.0%
GGAGGTGGGAGATCGTCGTC+AGG - chr3_4:8141483-8141502 None:intergenic 65.0%
GGGTTGGGGTTAGGTGGAGG+TGG - chr3_4:8141498-8141517 None:intergenic 65.0%
CGAGGGTTGGGGTTAGGTGG+AGG - chr3_4:8141501-8141520 None:intergenic 65.0%
CGACGAGGGTTGGGGTTAGG+TGG - chr3_4:8141504-8141523 None:intergenic 65.0%
CGACGACGAGGGTTGGGGTT+AGG - chr3_4:8141507-8141526 None:intergenic 65.0%
GCGGAGGAGGAGAATAGCGG+CGG - chr3_4:8141671-8141690 None:intergenic 65.0%
GAACGACGAGACTGCTGCGG+AGG - chr3_4:8141687-8141706 None:intergenic 65.0%
GGTGGCTATGAACGGGGAGG+TGG + chr3_4:8143145-8143164 Msa0488410:CDS 65.0%
GGGGTGTGTTTGTGTCCCCC+TGG + chr3_4:8144356-8144375 Msa0488410:intron 65.0%
!! TGCCAAGTGGGGGTGCTCGA+AGG + chr3_4:8144601-8144620 Msa0488410:CDS 65.0%
GACCTTCGAGCACCCCCACT+TGG - chr3_4:8144606-8144625 None:intergenic 65.0%
!! GGCGTTCCACCAGGAGCATC+AGG - chr3_4:8147175-8147194 None:intergenic 65.0%
TCGTGGGAATCGGCGAGACC+AGG + chr3_4:8147626-8147645 Msa0488410:CDS 65.0%
ACCAACCCGGCACCAGGTAC+AGG - chr3_4:8147801-8147820 None:intergenic 65.0%
AGAGCAACCAACCCGGCACC+AGG - chr3_4:8147807-8147826 None:intergenic 65.0%
GACCTGATCCCCGACGGATG+CGG + chr3_4:8148058-8148077 Msa0488410:CDS 65.0%
! GGAGGTGGAGCGGTGGTGGT+TGG - chr3_4:8141459-8141478 None:intergenic 70.0%
AGGAGGAGGTGGAGCGGTGG+TGG - chr3_4:8141463-8141482 None:intergenic 70.0%
GTCAGGAGGAGGTGGAGCGG+TGG - chr3_4:8141466-8141485 None:intergenic 70.0%
TTCGACCGCCGTCCTCACCG+TGG + chr3_4:8141555-8141574 Msa0488410:CDS 70.0%
CGACGAGACTGCTGCGGAGG+AGG - chr3_4:8141684-8141703 None:intergenic 70.0%
GAACGGGGAGGTGGAAGGGG+TGG + chr3_4:8143154-8143173 Msa0488410:CDS 70.0%
TCTTTGGCAGCTGGGGGGCC+TGG + chr3_4:8145204-8145223 Msa0488410:intron 70.0%
CTTTGGCAGCTGGGGGGCCT+GGG + chr3_4:8145205-8145224 Msa0488410:intron 70.0%
TTTGGCAGCTGGGGGGCCTG+GGG + chr3_4:8145206-8145225 Msa0488410:intron 70.0%
! GCCTGTACCTGGTGCCGGGT+TGG + chr3_4:8147797-8147816 Msa0488410:intron 70.0%
CTCCGCATCCGTCGGGGATC+AGG - chr3_4:8148063-8148082 None:intergenic 70.0%
CTGATCCCCGACGGATGCGG+AGG + chr3_4:8148061-8148080 Msa0488410:CDS 70.0%
GACCGCCGTCCTCACCGTGG+CGG + chr3_4:8141558-8141577 Msa0488410:CDS 75.0%
CTCGGCCGCCACGGTGAGGA+CGG - chr3_4:8141566-8141585 None:intergenic 75.0%
CACCTCCACCGCGGCCACCT+CGG - chr3_4:8141584-8141603 None:intergenic 75.0%
! GGCCGCCACGGTGAGGACGG+CGG - chr3_4:8141563-8141582 None:intergenic 80.0%
! CGTCCTCACCGTGGCGGCCG+AGG + chr3_4:8141564-8141583 Msa0488410:CDS 80.0%
! CCACCTCGGCCGCCACGGTG+AGG - chr3_4:8141570-8141589 None:intergenic 80.0%
! CCTCACCGTGGCGGCCGAGG+TGG + chr3_4:8141567-8141586 Msa0488410:CDS 80.0%
! CGAGGTGGCCGCGGTGGAGG+TGG + chr3_4:8141582-8141601 Msa0488410:CDS 80.0%
! CGCGGCCACCTCGGCCGCCA+CGG - chr3_4:8141575-8141594 None:intergenic 85.0%
! CGTGGCGGCCGAGGTGGCCG+CGG + chr3_4:8141573-8141592 Msa0488410:CDS 85.0%
! GGCCGAGGTGGCCGCGGTGG+AGG + chr3_4:8141579-8141598 Msa0488410:CDS 85.0%
! GGCGGCCGAGGTGGCCGCGG+TGG + chr3_4:8141576-8141595 Msa0488410:CDS 90.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 8141260 8149499 8141260 ID=Msa0488410;Name=Msa0488410
chr3_4 mRNA 8141260 8149499 8141260 ID=Msa0488410-mRNA-1;Parent=Msa0488410;Name=Msa0488410-mRNA-1;_AED=0.12;_eAED=0.12;_QI=151|1|1|1|1|1|12|480|703
chr3_4 exon 8141260 8141760 8141260 ID=Msa0488410-mRNA-1:exon:2724;Parent=Msa0488410-mRNA-1
chr3_4 exon 8143126 8143247 8143126 ID=Msa0488410-mRNA-1:exon:2725;Parent=Msa0488410-mRNA-1
chr3_4 exon 8144571 8144622 8144571 ID=Msa0488410-mRNA-1:exon:2726;Parent=Msa0488410-mRNA-1
chr3_4 exon 8145498 8145572 8145498 ID=Msa0488410-mRNA-1:exon:2727;Parent=Msa0488410-mRNA-1
chr3_4 exon 8145677 8145751 8145677 ID=Msa0488410-mRNA-1:exon:2728;Parent=Msa0488410-mRNA-1
chr3_4 exon 8145894 8145941 8145894 ID=Msa0488410-mRNA-1:exon:2729;Parent=Msa0488410-mRNA-1
chr3_4 exon 8146092 8146160 8146092 ID=Msa0488410-mRNA-1:exon:2730;Parent=Msa0488410-mRNA-1
chr3_4 exon 8146272 8147069 8146272 ID=Msa0488410-mRNA-1:exon:2731;Parent=Msa0488410-mRNA-1
chr3_4 exon 8147168 8147213 8147168 ID=Msa0488410-mRNA-1:exon:2732;Parent=Msa0488410-mRNA-1
chr3_4 exon 8147579 8147814 8147579 ID=Msa0488410-mRNA-1:exon:2733;Parent=Msa0488410-mRNA-1
chr3_4 exon 8147903 8148082 8147903 ID=Msa0488410-mRNA-1:exon:2734;Parent=Msa0488410-mRNA-1
chr3_4 exon 8148959 8149499 8148959 ID=Msa0488410-mRNA-1:exon:2735;Parent=Msa0488410-mRNA-1
chr3_4 five_prime_UTR 8141260 8141410 8141260 ID=Msa0488410-mRNA-1:five_prime_utr;Parent=Msa0488410-mRNA-1
chr3_4 CDS 8141411 8141760 8141411 ID=Msa0488410-mRNA-1:cds;Parent=Msa0488410-mRNA-1
chr3_4 CDS 8143126 8143247 8143126 ID=Msa0488410-mRNA-1:cds;Parent=Msa0488410-mRNA-1
chr3_4 CDS 8144571 8144622 8144571 ID=Msa0488410-mRNA-1:cds;Parent=Msa0488410-mRNA-1
chr3_4 CDS 8145498 8145572 8145498 ID=Msa0488410-mRNA-1:cds;Parent=Msa0488410-mRNA-1
chr3_4 CDS 8145677 8145751 8145677 ID=Msa0488410-mRNA-1:cds;Parent=Msa0488410-mRNA-1
chr3_4 CDS 8145894 8145941 8145894 ID=Msa0488410-mRNA-1:cds;Parent=Msa0488410-mRNA-1
chr3_4 CDS 8146092 8146160 8146092 ID=Msa0488410-mRNA-1:cds;Parent=Msa0488410-mRNA-1
chr3_4 CDS 8146272 8147069 8146272 ID=Msa0488410-mRNA-1:cds;Parent=Msa0488410-mRNA-1
chr3_4 CDS 8147168 8147213 8147168 ID=Msa0488410-mRNA-1:cds;Parent=Msa0488410-mRNA-1
chr3_4 CDS 8147579 8147814 8147579 ID=Msa0488410-mRNA-1:cds;Parent=Msa0488410-mRNA-1
chr3_4 CDS 8147903 8148082 8147903 ID=Msa0488410-mRNA-1:cds;Parent=Msa0488410-mRNA-1
chr3_4 CDS 8148959 8149019 8148959 ID=Msa0488410-mRNA-1:cds;Parent=Msa0488410-mRNA-1
chr3_4 three_prime_UTR 8149020 8149499 8149020 ID=Msa0488410-mRNA-1:three_prime_utr;Parent=Msa0488410-mRNA-1
Gene Sequence

>Msa0488410

ATGGCCGAAGTCGAAAACCTCCCTCTCGAATCTCACGACCGATCTCCAACCACCACCGCTCCACCTCCTCCTGACGACGATCTCCCACCTCCACCTAACCCCAACCCTCGTCGTCGCGATTTTGACCGTCGTGACGACAGAGATTTCGACCGCCGTCCTCACCGTGGCGGCCGAGGTGGCCGCGGTGGAGGTGGTTACTACAATAACCGTGATAGAGACATCAAACGCCGTCGTAGTCCTAGCCCTAACTATCGTGACCGCCGCTATTCTCCTCCTCCGCAGCAGTCTCGTCGTTCTCCTCCGCCGTATAAGAGATCTAGAAGGGGTAGTCCTCATAGACCTAACGACAGGTTTGGCCATGATCACTTCGGTGGCTATGAACGGGGAGGTGGAAGGGGTGGCTATGCAGATGATAGACCTGGTGGCAGATTTCCACATCGATCTGGAGGGGGATATCAAAACGGAATTTCTGATCTGGATGCCAATCGCGGTTATGCAGATTTGCCAAGTGGGGGTGCTCGAAGAGAGGGGTTGATGTCCTATAAGCAATTCATCCAGGAGCTTGAAGATGATATACTGCCATCTGAAGCTGAGCGTAGATACCAAGAGTACAAGTCAGAGTATATTACTACCCAAAAACGAGCTTATTTCAATACCCACAAGGATGCGGAGTGGTTGAAAGATAAGTATCATCCAACAAATTTACTTACAGTAATTGAAAGGAGGAATGAAAATGCTCGACGTTTGGCAAAGGAGTTTTTGCTTGATTTGCAAAGTGGAGCACTAGACATAAATCCAGGTTTAAACTCTGCATCCACTAAATCAGAGCAAGCCAGTGAGCCCAATTCAGAGGAGGAAACAGATGCCGGTGGTAAAAGAAGAAGACATGGCAGGGGATCTAATAAGGACAACGATTTCTCTGCTGCTCCGAAGGCTCACCCTGTCAGTTCTGAACCTAGAAGGATACAAGAAGATATTCATCAGGTTCAGGCTGTTGTTCGTAAGCTTGACAAGGAAAAAGGGATTGAAGATAATATTTTATGCACTAATGATCATAGTAAAAATAGTGATAAGGCTCGCAGTGGATCTGTGGGCCCTGTAGTAATTATCCGTGGCTTAACATCTATTAAGGGCTTAGAGGGTGTTGAGCTACTGGACACACTTATAACATATCTTTGGCGGATTCATGGTGTAGATTATTATGGAATGCTTGAGACTAGTGATGCCAAAGGTTTTAGGCATGTGAGACCAGAAGGAGCAAGGCATGAAGAAACAGCTAAGTCGGGGTCAGAATGGGAGAAAAAACTTGATTCATTTTGGCAGAGAAGGTTGGACAGCCTGGATCCCTTGGAAGTAAGGACTGCAAAGGAGAAGATAGATGCTGCAGCAGCTGACATGTTGGATCCATATGTTAGAAAAATTAGGGATGAAAAGTATGGTTGGAAGTATGGCTGTGGAGCCAAGAGTTGCACAAAGCTTTTTCATGCTGTTGAGTTTGTGTACAAACATCTCAAGCTAAAACACCCAGAGCTTGTGTTGGAACTAACATCAAAATTGCGGGAAGATCTTTATTTTCAAAATTACATGAATGATCCTGATGCTCCTGGTGGAACGCCTGTCATGCAGCAATCTCAGGACAAGCCTTTAAAGCGAAGGTTACTGGAAGGCCGATTGAAAGATGATCGTGGGAATCGGCGAGACCAGGATAGGAGCGACAGAACAAATGGAGATAGACCTGACAGTTCGCCATCCCATGAGAGGCAGTTGGGAAACCGTGATGAAACAATGTTCGATGCATATGGTGGACCTGCTGTATCATTCAACTCAGATATGCCCCCTCCTCCAGTTTTGATGCCTGTACCTGGTGCCGGGCCTCTGGGACCCTTTGTTCCTGCTCCACCAGAAGTTGCGATGCAGATGTTTAGGGATCAAGGACCATCTTCGTATGATCCATCAGGAATGACGATGCGTTCTGGTCCTCACATAGGGGGACAAGCCTCTATGATTGCTGTTCCTCCCACCTTTAGACCTGATCCCCGACGGATGCGGAGTTATCAAGACTTGGATGCCCCAGAAGAAGAAGTTACTGTCATAGACTATCGGAGCTTGTAG
Protein sequence

>Msa0488410

MAEVENLPLESHDRSPTTTAPPPPDDDLPPPPNPNPRRRDFDRRDDRDFDRRPHRGGRGGRGGGGYYNNRDRDIKRRRSPSPNYRDRRYSPPPQQSRRSPPPYKRSRRGSPHRPNDRFGHDHFGGYERGGGRGGYADDRPGGRFPHRSGGGYQNGISDLDANRGYADLPSGGARREGLMSYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRAYFNTHKDAEWLKDKYHPTNLLTVIERRNENARRLAKEFLLDLQSGALDINPGLNSASTKSEQASEPNSEEETDAGGKRRRHGRGSNKDNDFSAAPKAHPVSSEPRRIQEDIHQVQAVVRKLDKEKGIEDNILCTNDHSKNSDKARSGSVGPVVIIRGLTSIKGLEGVELLDTLITYLWRIHGVDYYGMLETSDAKGFRHVRPEGARHEETAKSGSEWEKKLDSFWQRRLDSLDPLEVRTAKEKIDAAAADMLDPYVRKIRDEKYGWKYGCGAKSCTKLFHAVEFVYKHLKLKHPELVLELTSKLREDLYFQNYMNDPDAPGGTPVMQQSQDKPLKRRLLEGRLKDDRGNRRDQDRSDRTNGDRPDSSPSHERQLGNRDETMFDAYGGPAVSFNSDMPPPPVLMPVPGAGPLGPFVPAPPEVAMQMFRDQGPSSYDPSGMTMRSGPHIGGQASMIAVPPTFRPDPRRMRSYQDLDAPEEEVTVIDYRSL*