Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828590 | XP_013459242.1 | 96.475 | 766 | 10 | 1 | 1 | 749 | 1 | 766 | 0.0 | 1490 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828590 | sp|Q08C72|CWC22_DANRE | 55.037 | 536 | 218 | 2 | 197 | 709 | 220 | 755 | 0.0 | 605 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828590 | A0A072UW40 | 96.475 | 766 | 10 | 1 | 1 | 749 | 1 | 766 | 0.0 | 1490 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000910 | Msa0828590 | 0.801787 | 7.637101e-49 | -8.615850e-47 |
| Msa0020390 | Msa0828590 | 0.821247 | 4.467746e-53 | -8.615850e-47 |
| Msa0024400 | Msa0828590 | 0.803539 | 3.322590e-49 | -8.615850e-47 |
| Msa0038870 | Msa0828590 | 0.823942 | 1.055648e-53 | -8.615850e-47 |
| Msa0063520 | Msa0828590 | 0.817383 | 3.393819e-52 | -8.615850e-47 |
| Msa0072420 | Msa0828590 | 0.821739 | 3.440057e-53 | -8.615850e-47 |
| Msa0090550 | Msa0828590 | 0.808258 | 3.383670e-50 | -8.615850e-47 |
| Msa0095360 | Msa0828590 | 0.816073 | 6.674302e-52 | -8.615850e-47 |
| Msa0095770 | Msa0828590 | 0.819854 | 9.334764e-53 | -8.615850e-47 |
| Msa0604290 | Msa0828590 | 0.889994 | 1.470473e-73 | -8.615850e-47 |
| Msa0610550 | Msa0828590 | 0.856324 | 3.475529e-62 | -8.615850e-47 |
| Msa0623990 | Msa0828590 | 0.848714 | 5.139736e-60 | -8.615850e-47 |
| Msa0624060 | Msa0828590 | 0.833189 | 6.153155e-56 | -8.615850e-47 |
| Msa0629240 | Msa0828590 | 0.833905 | 4.076261e-56 | -8.615850e-47 |
| Msa0634890 | Msa0828590 | 0.821250 | 4.460896e-53 | -8.615850e-47 |
| Msa0645530 | Msa0828590 | 0.824136 | 9.506108e-54 | -8.615850e-47 |
| Msa0651560 | Msa0828590 | 0.848945 | 4.435926e-60 | -8.615850e-47 |
| Msa0665280 | Msa0828590 | 0.807932 | 3.970508e-50 | -8.615850e-47 |
| Msa0672550 | Msa0828590 | 0.815593 | 8.539291e-52 | -8.615850e-47 |
| Msa0676130 | Msa0828590 | 0.837419 | 5.255751e-57 | -8.615850e-47 |
| Msa0676180 | Msa0828590 | 0.827243 | 1.742376e-54 | -8.615850e-47 |
| Msa0677530 | Msa0828590 | 0.862272 | 5.700477e-64 | -8.615850e-47 |
| Msa0679360 | Msa0828590 | 0.810094 | 1.367359e-50 | -8.615850e-47 |
| Msa0682680 | Msa0828590 | 0.814933 | 1.197002e-51 | -8.615850e-47 |
| Msa0685090 | Msa0828590 | 0.819559 | 1.089965e-52 | -8.615850e-47 |
| Msa0689320 | Msa0828590 | 0.803534 | 3.330592e-49 | -8.615850e-47 |
| Msa0689440 | Msa0828590 | 0.819959 | 8.828991e-53 | -8.615850e-47 |
| Msa0690310 | Msa0828590 | 0.819541 | 1.100109e-52 | -8.615850e-47 |
| Msa0693210 | Msa0828590 | 0.833102 | 6.467419e-56 | -8.615850e-47 |
| Msa0703810 | Msa0828590 | 0.813456 | 2.536811e-51 | -8.615850e-47 |
| Msa0722300 | Msa0828590 | -0.832224 | 1.067973e-55 | -8.615850e-47 |
| Msa0722350 | Msa0828590 | -0.823604 | 1.266474e-53 | -8.615850e-47 |
| Msa0741440 | Msa0828590 | 0.829687 | 4.476707e-55 | -8.615850e-47 |
| Msa0746170 | Msa0828590 | 0.833151 | 6.287892e-56 | -8.615850e-47 |
| Msa0746210 | Msa0828590 | 0.836677 | 8.131938e-57 | -8.615850e-47 |
| Msa0752700 | Msa0828590 | 0.828636 | 8.053699e-55 | -8.615850e-47 |
| Msa0766140 | Msa0828590 | 0.809288 | 2.037701e-50 | -8.615850e-47 |
| Msa0769970 | Msa0828590 | 0.817225 | 3.682272e-52 | -8.615850e-47 |
| Msa0776560 | Msa0828590 | 0.842306 | 2.802912e-58 | -8.615850e-47 |
| Msa0786750 | Msa0828590 | 0.800935 | 1.140991e-48 | -8.615850e-47 |
| Msa0794970 | Msa0828590 | 0.850724 | 1.411022e-60 | -8.615850e-47 |
| Msa0822500 | Msa0828590 | 0.822478 | 2.318296e-53 | -8.615850e-47 |
| Msa0828590 | Msa0829220 | 0.830385 | 3.025398e-55 | -8.615850e-47 |
| Msa0828590 | Msa0831100 | 0.847015 | 1.510554e-59 | -8.615850e-47 |
| Msa0828590 | Msa0838370 | 0.812294 | 4.557181e-51 | -8.615850e-47 |
| Msa0828590 | Msa0872250 | 0.802913 | 4.477546e-49 | -8.615850e-47 |
| Msa0828590 | Msa0910960 | 0.806622 | 7.523445e-50 | -8.615850e-47 |
| Msa0828590 | Msa0933380 | 0.801123 | 1.044726e-48 | -8.615850e-47 |
| Msa0828590 | Msa0936480 | 0.803582 | 3.253625e-49 | -8.615850e-47 |
| Msa0828590 | Msa0958000 | 0.854516 | 1.168286e-61 | -8.615850e-47 |
| Msa0828590 | Msa0982090 | -0.806112 | 9.636858e-50 | -8.615850e-47 |
| Msa0828590 | Msa0985180 | 0.856639 | 2.809015e-62 | -8.615850e-47 |
| Msa0828590 | Msa0985220 | 0.800897 | 1.161449e-48 | -8.615850e-47 |
| Msa0828590 | Msa0992510 | 0.815822 | 7.591723e-52 | -8.615850e-47 |
| Msa0828590 | Msa1002960 | 0.812452 | 4.210291e-51 | -8.615850e-47 |
| Msa0828590 | Msa1021520 | 0.835249 | 1.872794e-56 | -8.615850e-47 |
| Msa0828590 | Msa1031660 | 0.802994 | 4.306473e-49 | -8.615850e-47 |
| Msa0828590 | Msa1037520 | 0.832538 | 8.930732e-56 | -8.615850e-47 |
| Msa0828590 | Msa1039810 | 0.830154 | 3.444860e-55 | -8.615850e-47 |
| Msa0828590 | Msa1062040 | 0.809453 | 1.877876e-50 | -8.615850e-47 |
| Msa0828590 | Msa1067590 | -0.806458 | 8.146364e-50 | -8.615850e-47 |
| Msa0828590 | Msa1080150 | 0.808097 | 3.662110e-50 | -8.615850e-47 |
| Msa0828590 | Msa1096070 | 0.812123 | 4.966718e-51 | -8.615850e-47 |
| Msa0828590 | Msa1118860 | 0.853976 | 1.673304e-61 | -8.615850e-47 |
| Msa0828590 | Msa1128270 | 0.859937 | 2.926755e-63 | -8.615850e-47 |
| Msa0828590 | Msa1128280 | 0.876860 | 9.974643e-69 | -8.615850e-47 |
| Msa0828590 | Msa1130400 | 0.827471 | 1.536385e-54 | -8.615850e-47 |
| Msa0828590 | Msa1158640 | -0.838418 | 2.910110e-57 | -8.615850e-47 |
| Msa0828590 | Msa1165270 | 0.866836 | 2.129866e-65 | -8.615850e-47 |
| Msa0828590 | Msa1175350 | 0.807871 | 4.089818e-50 | -8.615850e-47 |
| Msa0828590 | Msa1178580 | 0.841238 | 5.364281e-58 | -8.615850e-47 |
| Msa0828590 | Msa1186760 | 0.803971 | 2.702632e-49 | -8.615850e-47 |
| Msa0828590 | Msa1190100 | -0.844984 | 5.389350e-59 | -8.615850e-47 |
| Msa0828590 | Msa1192140 | -0.816283 | 5.989629e-52 | -8.615850e-47 |
| Msa0828590 | Msa1211420 | -0.800564 | 1.358638e-48 | -8.615850e-47 |
| Msa0828590 | Msa1213890 | 0.823291 | 1.499187e-53 | -8.615850e-47 |
| Msa0828590 | Msa1218620 | 0.864210 | 1.432044e-64 | -8.615850e-47 |
| Msa0828590 | Msa1228040 | 0.853748 | 1.946324e-61 | -8.615850e-47 |
| Msa0828590 | Msa1231840 | 0.802346 | 5.860701e-49 | -8.615850e-47 |
| Msa0828590 | Msa1233850 | 0.836813 | 7.507708e-57 | -8.615850e-47 |
| Msa0828590 | Msa1258030 | -0.853146 | 2.897536e-61 | -8.615850e-47 |
| Msa0828590 | Msa1271130 | 0.841579 | 4.361640e-58 | -8.615850e-47 |
| Msa0828590 | Msa1276150 | 0.842859 | 1.999155e-58 | -8.615850e-47 |
| Msa0828590 | Msa1315890 | 0.821454 | 4.002613e-53 | -8.615850e-47 |
| Msa0828590 | Msa1321590 | 0.817204 | 3.723328e-52 | -8.615850e-47 |
| Msa0828590 | Msa1327640 | 0.838059 | 3.600609e-57 | -8.615850e-47 |
| Msa0828590 | Msa1329750 | 0.818603 | 1.798426e-52 | -8.615850e-47 |
| Msa0828590 | Msa1331050 | -0.801090 | 1.060770e-48 | -8.615850e-47 |
| Msa0828590 | Msa1331760 | 0.820192 | 7.810152e-53 | -8.615850e-47 |
| Msa0828590 | Msa1341060 | 0.827555 | 1.466403e-54 | -8.615850e-47 |
| Msa0828590 | Msa1346840 | 0.817235 | 3.663106e-52 | -8.615850e-47 |
| Msa0828590 | Msa1364350 | -0.820249 | 7.578599e-53 | -8.615850e-47 |
| Msa0828590 | Msa1373160 | 0.806220 | 9.143891e-50 | -8.615850e-47 |
| Msa0828590 | Msa1373850 | 0.809348 | 1.977765e-50 | -8.615850e-47 |
| Msa0828590 | Msa1374390 | -0.821884 | 3.184562e-53 | -8.615850e-47 |
| Msa0828590 | Msa1378410 | 0.832919 | 7.180444e-56 | -8.615850e-47 |
| Msa0828590 | Msa1382380 | -0.806501 | 7.978690e-50 | -8.615850e-47 |
| Msa0828590 | Msa1384100 | 0.801745 | 7.788604e-49 | -8.615850e-47 |
| Msa0828590 | Msa1384760 | -0.802030 | 6.807602e-49 | -8.615850e-47 |
| Msa0828590 | Msa1392980 | 0.841926 | 3.533816e-58 | -8.615850e-47 |
| Msa0828590 | Msa1407370 | 0.824347 | 8.477831e-54 | -8.615850e-47 |
| Msa0828590 | Msa1407760 | 0.817710 | 2.863231e-52 | -8.615850e-47 |
| Msa0828590 | Msa1419690 | 0.820648 | 6.137391e-53 | -8.615850e-47 |
| Msa0828590 | Msa1435390 | 0.834703 | 2.571755e-56 | -8.615850e-47 |
| Msa0828590 | Msa1437730 | 0.817716 | 2.854433e-52 | -8.615850e-47 |
| Msa0828590 | Msa1444120 | 0.802964 | 4.368873e-49 | -8.615850e-47 |
| Msa0828590 | Msa1446080 | 0.821088 | 4.862590e-53 | -8.615850e-47 |
| Msa0828590 | Msa1458290 | 0.871414 | 6.957545e-67 | -8.615850e-47 |
| Msa0120880 | Msa0828590 | 0.810102 | 1.362070e-50 | -8.615850e-47 |
| Msa0122530 | Msa0828590 | 0.834652 | 2.647885e-56 | -8.615850e-47 |
| Msa0149440 | Msa0828590 | 0.820854 | 5.505441e-53 | -8.615850e-47 |
| Msa0163510 | Msa0828590 | 0.812108 | 5.004553e-51 | -8.615850e-47 |
| Msa0167980 | Msa0828590 | 0.803501 | 3.383068e-49 | -8.615850e-47 |
| Msa0172980 | Msa0828590 | 0.821050 | 4.961014e-53 | -8.615850e-47 |
| Msa0173800 | Msa0828590 | 0.822097 | 2.842761e-53 | -8.615850e-47 |
| Msa0183870 | Msa0828590 | 0.813006 | 3.184353e-51 | -8.615850e-47 |
| Msa0186540 | Msa0828590 | 0.845863 | 3.115114e-59 | -8.615850e-47 |
| Msa0190590 | Msa0828590 | 0.830855 | 2.321495e-55 | -8.615850e-47 |
| Msa0191070 | Msa0828590 | 0.817166 | 3.796886e-52 | -8.615850e-47 |
| Msa0194920 | Msa0828590 | 0.834715 | 2.553063e-56 | -8.615850e-47 |
| Msa0202490 | Msa0828590 | 0.802356 | 5.832765e-49 | -8.615850e-47 |
| Msa0204960 | Msa0828590 | 0.836530 | 8.866155e-57 | -8.615850e-47 |
| Msa0207670 | Msa0828590 | 0.810924 | 9.049271e-51 | -8.615850e-47 |
| Msa0215990 | Msa0828590 | 0.864118 | 1.529741e-64 | -8.615850e-47 |
| Msa0217670 | Msa0828590 | 0.845953 | 2.943288e-59 | -8.615850e-47 |
| Msa0223330 | Msa0828590 | 0.815972 | 7.029143e-52 | -8.615850e-47 |
| Msa0223340 | Msa0828590 | 0.821995 | 3.001802e-53 | -8.615850e-47 |
| Msa0232790 | Msa0828590 | 0.852945 | 3.309039e-61 | -8.615850e-47 |
| Msa0233370 | Msa0828590 | 0.815714 | 8.025768e-52 | -8.615850e-47 |
| Msa0236920 | Msa0828590 | 0.812725 | 3.668969e-51 | -8.615850e-47 |
| Msa0237300 | Msa0828590 | 0.802646 | 5.083523e-49 | -8.615850e-47 |
| Msa0377290 | Msa0828590 | 0.883224 | 5.374666e-71 | -8.615850e-47 |
| Msa0377820 | Msa0828590 | 0.863878 | 1.817648e-64 | -8.615850e-47 |
| Msa0382370 | Msa0828590 | 0.801346 | 9.403862e-49 | -8.615850e-47 |
| Msa0385500 | Msa0828590 | 0.884498 | 1.822200e-71 | -8.615850e-47 |
| Msa0385740 | Msa0828590 | 0.834857 | 2.350953e-56 | -8.615850e-47 |
| Msa0386770 | Msa0828590 | 0.802134 | 6.480770e-49 | -8.615850e-47 |
| Msa0387820 | Msa0828590 | 0.813400 | 2.609114e-51 | -8.615850e-47 |
| Msa0388730 | Msa0828590 | 0.829141 | 6.077628e-55 | -8.615850e-47 |
| Msa0395980 | Msa0828590 | 0.825208 | 5.314573e-54 | -8.615850e-47 |
| Msa0404630 | Msa0828590 | 0.898276 | 6.216276e-77 | -8.615850e-47 |
| Msa0426580 | Msa0828590 | 0.827276 | 1.711188e-54 | -8.615850e-47 |
| Msa0432500 | Msa0828590 | 0.811064 | 8.439776e-51 | -8.615850e-47 |
| Msa0439960 | Msa0828590 | 0.803573 | 3.269074e-49 | -8.615850e-47 |
| Msa0440510 | Msa0828590 | 0.835214 | 1.911577e-56 | -8.615850e-47 |
| Msa0462600 | Msa0828590 | 0.973999 | 2.177073e-137 | -8.615850e-47 |
| Msa0466350 | Msa0828590 | 0.846719 | 1.820182e-59 | -8.615850e-47 |
| Msa0472930 | Msa0828590 | 0.865479 | 5.733593e-65 | -8.615850e-47 |
| Msa0244980 | Msa0828590 | 0.812929 | 3.310249e-51 | -8.615850e-47 |
| Msa0256140 | Msa0828590 | 0.882353 | 1.118771e-70 | -8.615850e-47 |
| Msa0257490 | Msa0828590 | 0.861360 | 1.083512e-63 | -8.615850e-47 |
| Msa0259680 | Msa0828590 | 0.822944 | 1.806025e-53 | -8.615850e-47 |
| Msa0272300 | Msa0828590 | 0.853730 | 1.969190e-61 | -8.615850e-47 |
| Msa0281530 | Msa0828590 | 0.848948 | 4.425221e-60 | -8.615850e-47 |
| Msa0283420 | Msa0828590 | 0.802512 | 5.416210e-49 | -8.615850e-47 |
| Msa0284180 | Msa0828590 | 0.801136 | 1.038363e-48 | -8.615850e-47 |
| Msa0296630 | Msa0828590 | -0.817792 | 2.744214e-52 | -8.615850e-47 |
| Msa0296790 | Msa0828590 | 0.856495 | 3.095610e-62 | -8.615850e-47 |
| Msa0304730 | Msa0828590 | 0.813778 | 2.154745e-51 | -8.615850e-47 |
| Msa0315520 | Msa0828590 | 0.804634 | 1.965834e-49 | -8.615850e-47 |
| Msa0318680 | Msa0828590 | 0.804658 | 1.943359e-49 | -8.615850e-47 |
| Msa0320590 | Msa0828590 | 0.823830 | 1.121498e-53 | -8.615850e-47 |
| Msa0321690 | Msa0828590 | 0.822175 | 2.726680e-53 | -8.615850e-47 |
| Msa0336450 | Msa0828590 | 0.809408 | 1.920767e-50 | -8.615850e-47 |
| Msa0341480 | Msa0828590 | 0.823165 | 1.604432e-53 | -8.615850e-47 |
| Msa0343500 | Msa0828590 | 0.841405 | 4.846589e-58 | -8.615850e-47 |
| Msa0358860 | Msa0828590 | 0.805952 | 1.041323e-49 | -8.615850e-47 |
| Msa0362890 | Msa0828590 | 0.801294 | 9.635594e-49 | -8.615850e-47 |
| Msa0363640 | Msa0828590 | 0.816573 | 5.158963e-52 | -8.615850e-47 |
| Msa0491000 | Msa0828590 | 0.844839 | 5.896803e-59 | -8.615850e-47 |
| Msa0493740 | Msa0828590 | 0.804546 | 2.050877e-49 | -8.615850e-47 |
| Msa0496450 | Msa0828590 | 0.813262 | 2.797815e-51 | -8.615850e-47 |
| Msa0512340 | Msa0828590 | 0.810954 | 8.913908e-51 | -8.615850e-47 |
| Msa0517590 | Msa0828590 | 0.819273 | 1.266458e-52 | -8.615850e-47 |
| Msa0527540 | Msa0828590 | 0.871917 | 4.741226e-67 | -8.615850e-47 |
| Msa0531530 | Msa0828590 | 0.806603 | 7.592847e-50 | -8.615850e-47 |
| Msa0542290 | Msa0828590 | 0.832144 | 1.117915e-55 | -8.615850e-47 |
| Msa0542560 | Msa0828590 | 0.893544 | 5.692480e-75 | -8.615850e-47 |
| Msa0544160 | Msa0828590 | 0.820297 | 7.389582e-53 | -8.615850e-47 |
| Msa0544840 | Msa0828590 | 0.812110 | 4.998228e-51 | -8.615850e-47 |
| Msa0547160 | Msa0828590 | 0.812245 | 4.671083e-51 | -8.615850e-47 |
| Msa0549450 | Msa0828590 | 0.857782 | 1.290762e-62 | -8.615850e-47 |
| Msa0588260 | Msa0828590 | 0.819083 | 1.399211e-52 | -8.615850e-47 |
| Msa0595170 | Msa0828590 | 0.819369 | 1.204353e-52 | -8.615850e-47 |
| Msa0600080 | Msa0828590 | 0.801113 | 1.049381e-48 | -8.615850e-47 |
| Msa0600450 | Msa0828590 | 0.813760 | 2.173949e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828590 | MtrunA17_Chr3g0094801 | 96.475 | 766 | 10 | 1 | 1 | 749 | 1 | 766 | 0.0 | 1490 |
| Msa0828590 | MtrunA17_Chr7g0258901 | 69.231 | 442 | 111 | 6 | 277 | 698 | 1 | 437 | 0.0 | 619 |
| Msa0828590 | MtrunA17_Chr7g0258781 | 75.115 | 217 | 53 | 1 | 483 | 698 | 7 | 223 | 1.11e-116 | 351 |
| Msa0828590 | MtrunA17_Chr7g0253771 | 29.496 | 139 | 97 | 1 | 504 | 641 | 586 | 724 | 1.95e-15 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828590 | AT1G80930.1 | 69.886 | 704 | 163 | 12 | 36 | 710 | 174 | 857 | 0.0 | 937 |
| Msa0828590 | AT1G52325.1 | 59.756 | 82 | 33 | 0 | 614 | 695 | 39 | 120 | 8.88e-26 | 103 |
| Msa0828590 | AT1G52325.1 | 72.727 | 44 | 12 | 0 | 512 | 555 | 1 | 44 | 9.04e-16 | 75.5 |
| Msa0828590 | AT5G17930.1 | 27.753 | 227 | 134 | 5 | 472 | 696 | 553 | 751 | 1.37e-16 | 84.7 |
Find 208 sgRNAs with CRISPR-Local
Find 482 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTGACTTGGGATGCTTTA+AGG | 0.176862 | 5_4:-1322935 | Msa0828590:CDS |
| CTTCACCACCACGATGTTTC+CGG | 0.221761 | 5_4:+1323510 | None:intergenic |
| CTCAGATATTACGGTCTTCT+AGG | 0.222902 | 5_4:-1320249 | Msa0828590:CDS |
| AGGAAGAAGTTGATCGAAAA+AGG | 0.273803 | 5_4:-1323481 | Msa0828590:CDS |
| ATTTATTAAGATTCTCTTCC+AGG | 0.277884 | 5_4:-1320016 | Msa0828590:intron |
| GGATAACCGTCGAAGGTATA+AGG | 0.286872 | 5_4:-1323441 | Msa0828590:CDS |
| TGACAACACCATAACATAAA+AGG | 0.294569 | 5_4:+1317614 | None:intergenic |
| GCTTTAAGGAAGAGTATTAA+TGG | 0.296789 | 5_4:-1322921 | Msa0828590:CDS |
| AGATCGGCGTCGTCGATATA+AGG | 0.303241 | 5_4:-1323321 | Msa0828590:CDS |
| ATATGATAAGAAGAGGAATT+TGG | 0.304825 | 5_4:-1323282 | Msa0828590:CDS |
| AACGTGATGTGAAGAGAATT+AGG | 0.329271 | 5_4:-1323403 | Msa0828590:CDS |
| AAAGGAGGCATAGAGTTGAT+AGG | 0.343956 | 5_4:-1323253 | Msa0828590:CDS |
| AATGGCGATGCATCTAAGTT+AGG | 0.346040 | 5_4:-1323044 | Msa0828590:CDS |
| CAAACCCGACCCCAATTATC+TGG | 0.347857 | 5_4:-1320689 | Msa0828590:CDS |
| TATTAATGGATTGGTGAATA+AGG | 0.348278 | 5_4:-1322907 | Msa0828590:CDS |
| CTCTACCCATCTCTAGGGTT+TGG | 0.355804 | 5_4:+1323627 | None:intergenic |
| CTCTCACCGAGAGGACTTCA+TGG | 0.369360 | 5_4:-1322383 | Msa0828590:intron |
| AAAGAAGGCATAGGGCTGAT+AGG | 0.374529 | 5_4:-1323373 | Msa0828590:CDS |
| GATGGCGTCACCCGGGTTTA+CGG | 0.376345 | 5_4:-1322787 | Msa0828590:CDS |
| TTCACATCCATTGGTCTTGG+TGG | 0.379622 | 5_4:-1318008 | Msa0828590:CDS |
| CTTCGCCTCTACCCATCTCT+AGG | 0.383115 | 5_4:+1323621 | None:intergenic |
| AAGAAGAAAGAGGAAGGAAG+TGG | 0.385688 | 5_4:-1323101 | Msa0828590:CDS |
| ATACCGGCAAGTGTGATAAA+TGG | 0.389347 | 5_4:-1323062 | Msa0828590:CDS |
| ATCATCCTCGCTAACTTAAA+CGG | 0.399524 | 5_4:+1322996 | None:intergenic |
| GGCATAGGGCTGATAGGGTT+AGG | 0.401872 | 5_4:-1323367 | Msa0828590:CDS |
| GACGAACTGCCCTTCTTCCT+CGG | 0.406324 | 5_4:+1323586 | None:intergenic |
| GAGAATTTGATTCGTGGAAG+AGG | 0.407751 | 5_4:-1322840 | Msa0828590:CDS |
| AGAAGGACAGGAAGAGAGAA+AGG | 0.408044 | 5_4:-1323211 | Msa0828590:CDS |
| TCGCCATTTATCACACTTGC+CGG | 0.408536 | 5_4:+1323059 | None:intergenic |
| AGCACGACTGTGTGCGGCGG+CGG | 0.412026 | 5_4:+1323681 | None:intergenic |
| AAGCTCCGATTCATCAGATT+CGG | 0.416241 | 5_4:-1317886 | Msa0828590:CDS |
| TTAACCTCTCATTTAGCAAC+CGG | 0.416989 | 5_4:+1318111 | None:intergenic |
| TGTTGTTGCATGATCATCCT+TGG | 0.421914 | 5_4:+1317948 | None:intergenic |
| TACAGGGTTATCCAGCTGTT+CGG | 0.427354 | 5_4:-1320907 | Msa0828590:intron |
| ACGTGATGTGAAGAGAATTA+GGG | 0.427846 | 5_4:-1323402 | Msa0828590:CDS |
| AGAACTTATCTCAGATATTA+CGG | 0.428108 | 5_4:-1320258 | Msa0828590:CDS |
| AAGGAAGAGTATTAATGGAT+TGG | 0.432567 | 5_4:-1322916 | Msa0828590:CDS |
| TAATATTACGAATATAATTC+CGG | 0.435178 | 5_4:-1322874 | Msa0828590:CDS |
| TCGTGGTGGTGAAGATTTAG+AGG | 0.435202 | 5_4:-1323501 | Msa0828590:CDS |
| ATAGGAGGAATGGGGAGAGA+AGG | 0.436272 | 5_4:-1323169 | Msa0828590:CDS |
| TAGGAGGAATGGGGAGAGAA+GGG | 0.439511 | 5_4:-1323168 | Msa0828590:CDS |
| CTACCTAAGCTTTCTTTGCT+CGG | 0.441379 | 5_4:-1317710 | Msa0828590:three_prime_UTR |
| GGAAGGCTCGGATGCTGAAT+CGG | 0.445016 | 5_4:-1320599 | Msa0828590:CDS |
| TCAAGTTCAGGCCGAACAGC+TGG | 0.448583 | 5_4:+1320896 | None:intergenic |
| AGCTCCGATTCATCAGATTC+GGG | 0.454738 | 5_4:-1317885 | Msa0828590:CDS |
| AGCAAATACATCCGTAAACC+CGG | 0.455143 | 5_4:+1322776 | None:intergenic |
| AGCTTCCTCATTCTCTTCAT+CGG | 0.455297 | 5_4:+1320561 | None:intergenic |
| GGAAGAGGAATCAGAGGGAG+AGG | 0.455771 | 5_4:-1320620 | Msa0828590:CDS |
| ATGTGAAGAGAATTAGGGAT+AGG | 0.462288 | 5_4:-1323397 | Msa0828590:CDS |
| TGCTCCACGAGGTCAAGTTC+AGG | 0.464216 | 5_4:+1320884 | None:intergenic |
| TGTGAAGTTTGTAGCACATC+TGG | 0.464680 | 5_4:-1322534 | Msa0828590:CDS |
| ATGACGATGATAGGAGGAAT+GGG | 0.465728 | 5_4:-1323178 | Msa0828590:CDS |
| ATGGCGATGCATCTAAGTTA+GGG | 0.468521 | 5_4:-1323043 | Msa0828590:CDS |
| TTCTCCAGATAATTGGGGTC+GGG | 0.471760 | 5_4:+1320685 | None:intergenic |
| GTGTTGTCAATTGTGTTGCC+TGG | 0.475616 | 5_4:-1317600 | Msa0828590:three_prime_UTR |
| TATAATTCCGGAGTTGTTTG+CGG | 0.475883 | 5_4:-1322862 | Msa0828590:CDS |
| AGATTTCTGAATGGAAAGAA+AGG | 0.478127 | 5_4:+1323757 | None:intergenic |
| AACACGAAGTTTCCTCAAGT+TGG | 0.480942 | 5_4:-1322735 | Msa0828590:CDS |
| GAAAGTAAGAAGAAAGAGGA+AGG | 0.481288 | 5_4:-1323107 | Msa0828590:CDS |
| TGAACTTGACCTCGTGGAGC+AGG | 0.481515 | 5_4:-1320882 | Msa0828590:CDS |
| GGTTCCCGAATCTGATGAAT+CGG | 0.481563 | 5_4:+1317881 | None:intergenic |
| AAGGAGGCATAGAGTTGATA+GGG | 0.482275 | 5_4:-1323252 | Msa0828590:CDS |
| GAGAGCGAGGACGGTGATAC+CGG | 0.485924 | 5_4:-1323078 | Msa0828590:CDS |
| GATAACCGTCGAAGGTATAA+GGG | 0.486725 | 5_4:-1323440 | Msa0828590:CDS |
| CGGAGTATCAGAGGTTGACT+TGG | 0.488147 | 5_4:-1322947 | Msa0828590:CDS |
| ACTTGACTCTGACTCAGAAC+TGG | 0.488401 | 5_4:+1317860 | None:intergenic |
| AAGCTTGCTGGGTGAGGAAG+AGG | 0.489089 | 5_4:-1320635 | Msa0828590:CDS |
| GGAAGAAAGTAAGAAGAAAG+AGG | 0.490672 | 5_4:-1323111 | Msa0828590:CDS |
| ATAAGAAGAGGAATTTGGAT+AGG | 0.490938 | 5_4:-1323277 | Msa0828590:CDS |
| AGAAGAAAGAGGAAGGAAGT+GGG | 0.491186 | 5_4:-1323100 | Msa0828590:CDS |
| ATCGACGCGATGACGATGAT+AGG | 0.494629 | 5_4:-1323187 | Msa0828590:CDS |
| AAGTCGTGTCGTCCTCAGTC+AGG | 0.494714 | 5_4:+1320052 | None:intergenic |
| CGAGATTTAAGATTTCTGAA+TGG | 0.498236 | 5_4:+1323748 | None:intergenic |
| ATCTGAGATAAGTTCTCTCC+TGG | 0.500569 | 5_4:+1320265 | None:intergenic |
| CAGGAATTGTCAGAGCATCT+AGG | 0.500837 | 5_4:-1318137 | Msa0828590:CDS |
| CCTCTTGACCTGGCTCAAGA+TGG | 0.500906 | 5_4:+1320425 | None:intergenic |
| AAAGGAATAGGGATAGGGAT+AGG | 0.501070 | 5_4:-1323463 | Msa0828590:CDS |
| CCTCATCCAAGGAGACTTCG+TGG | 0.501456 | 5_4:+1320846 | None:intergenic |
| GATAACCCACGAAGTCTCCT+TGG | 0.501647 | 5_4:-1320852 | Msa0828590:CDS |
| AGTGAATCGTCCGAGGAAGA+AGG | 0.504113 | 5_4:-1323596 | Msa0828590:CDS |
| TCAAAAGAATCCTGCATGGT+TGG | 0.504273 | 5_4:+1318083 | None:intergenic |
| TAGGGATAATGATAATGATA+AGG | 0.505045 | 5_4:-1323348 | Msa0828590:CDS |
| TCAGATATTACGGTCTTCTA+GGG | 0.505318 | 5_4:-1320248 | Msa0828590:CDS |
| GAGAGTGATGAAGAGAAAAT+CGG | 0.511678 | 5_4:+1323703 | None:intergenic |
| TACGGATGTATTTGCTGCGA+TGG | 0.513062 | 5_4:-1322769 | Msa0828590:CDS |
| ATTTATTTGTTTCGAGCCTG+TGG | 0.514254 | 5_4:+1320151 | None:intergenic |
| AGGGATAGAGTTGAAAAGAA+TGG | 0.514880 | 5_4:-1323149 | Msa0828590:CDS |
| AGCAGTATTCATTGATCCAC+AGG | 0.516452 | 5_4:-1320167 | Msa0828590:CDS |
| GATTTCTGAATGGAAAGAAA+GGG | 0.519649 | 5_4:+1323758 | None:intergenic |
| AAGAAGGCATAGGGCTGATA+GGG | 0.519755 | 5_4:-1323372 | Msa0828590:CDS |
| ATCAGAGGGAGAGGAAGGCT+CGG | 0.519884 | 5_4:-1320611 | Msa0828590:CDS |
| ATAATGATAATGAGAAGGAC+AGG | 0.525843 | 5_4:-1323223 | Msa0828590:CDS |
| GATGACGATGATAGGAGGAA+TGG | 0.527318 | 5_4:-1323179 | Msa0828590:CDS |
| TAAGTTAGCGAGGATGATGA+AGG | 0.527435 | 5_4:-1322991 | Msa0828590:CDS |
| AAGTCACAGATGGCGTCACC+CGG | 0.527531 | 5_4:-1322795 | Msa0828590:CDS |
| GTTACGTACGGCGGTTGAAG+AGG | 0.527785 | 5_4:+1323655 | None:intergenic |
| AACTCACCATGAAGTCCTCT+CGG | 0.527918 | 5_4:+1322377 | None:intergenic |
| GGTTTGGTTGTTGTTACGTA+CGG | 0.528978 | 5_4:+1323643 | None:intergenic |
| TTCGCCTCTACCCATCTCTA+GGG | 0.529928 | 5_4:+1323622 | None:intergenic |
| AGGAAGTGGGAGAGCGAGGA+CGG | 0.530179 | 5_4:-1323087 | Msa0828590:CDS |
| CAAGTCAACCTCTGATACTC+CGG | 0.530824 | 5_4:+1322948 | None:intergenic |
| GGGTGAGGAAGAGGAATCAG+AGG | 0.530871 | 5_4:-1320626 | Msa0828590:CDS |
| GAGGAATCAGAGGGAGAGGA+AGG | 0.532139 | 5_4:-1320616 | Msa0828590:CDS |
| TCACCGAGCAAAGAAAGCTT+AGG | 0.532493 | 5_4:+1317707 | None:intergenic |
| CTAGAGATGGGTAGAGGCGA+AGG | 0.532669 | 5_4:-1323620 | Msa0828590:exon |
| AGGAAGGAAGTGGGAGAGCG+AGG | 0.533639 | 5_4:-1323091 | Msa0828590:CDS |
| AATGTACCAAGGGAAGTCTC+AGG | 0.534127 | 5_4:+1320815 | None:intergenic |
| GAATTAGGGATAGGGAAAGA+AGG | 0.534748 | 5_4:-1323388 | Msa0828590:CDS |
| AGCCACTTCAACACTGTCAT+CGG | 0.534953 | 5_4:+1322445 | None:intergenic |
| AAGGAATAGGGATAGGGATA+GGG | 0.535428 | 5_4:-1323462 | Msa0828590:CDS |
| GCATCTAAGTTAGGGAAAAG+TGG | 0.535960 | 5_4:-1323035 | Msa0828590:CDS |
| ATTCTCCAGATAATTGGGGT+CGG | 0.536893 | 5_4:+1320684 | None:intergenic |
| AGAGGAATTTGGATAGGGAA+AGG | 0.536981 | 5_4:-1323271 | Msa0828590:CDS |
| CTTCTTATCATATTCCTCAT+CGG | 0.539763 | 5_4:+1323292 | None:intergenic |
| TGTCAGAGCATCTAGGCATC+CGG | 0.540897 | 5_4:-1318130 | Msa0828590:CDS |
| CAACAACCAAACCCTAGAGA+TGG | 0.541228 | 5_4:-1323633 | Msa0828590:exon |
| AGTTGACGATAAGAGTAGTC+CGG | 0.544129 | 5_4:-1322967 | Msa0828590:CDS |
| AGAATTTGATTCGTGGAAGA+GGG | 0.547231 | 5_4:-1322839 | Msa0828590:CDS |
| AACAAATAAATTGAGAAATG+TGG | 0.548686 | 5_4:-1320139 | Msa0828590:CDS |
| TGTGAAGAGAATTAGGGATA+GGG | 0.548968 | 5_4:-1323396 | Msa0828590:CDS |
| TTTCGTGGAATTCTGCATGA+AGG | 0.549789 | 5_4:-1321307 | Msa0828590:CDS |
| AGAGTTGAAGAAAAGCTTGC+TGG | 0.550608 | 5_4:-1320647 | Msa0828590:CDS |
| TAAGAAGAGGAATTTGGATA+GGG | 0.551290 | 5_4:-1323276 | Msa0828590:CDS |
| ACAGGACACGTGCATCATCC+AGG | 0.552216 | 5_4:+1317582 | None:intergenic |
| GCATAGGGCTGATAGGGTTA+GGG | 0.554442 | 5_4:-1323366 | Msa0828590:CDS |
| AGAATGTGGCTCAATGCTGC+AGG | 0.558595 | 5_4:-1322408 | Msa0828590:CDS |
| TTCACAGCAGCAAGTAATTG+AGG | 0.561550 | 5_4:+1322551 | None:intergenic |
| ATCCTCGCTAACTTAAACGG+CGG | 0.561726 | 5_4:+1322999 | None:intergenic |
| AAATTCTCCGCAAACAACTC+CGG | 0.563195 | 5_4:+1322855 | None:intergenic |
| GAAGAAAAGCTTGCTGGGTG+AGG | 0.564485 | 5_4:-1320641 | Msa0828590:CDS |
| GTTAAATGATCCAACCATGC+AGG | 0.568417 | 5_4:-1318093 | Msa0828590:CDS |
| GACAGTGTTGAAGTGGCTGT+TGG | 0.568452 | 5_4:-1322440 | Msa0828590:CDS |
| ATAGATCCTGAGACTTCCCT+TGG | 0.569265 | 5_4:-1320821 | Msa0828590:intron |
| GTGAATCGTCCGAGGAAGAA+GGG | 0.570148 | 5_4:-1323595 | Msa0828590:CDS |
| TTTGCGGAGAATTTGATTCG+TGG | 0.570272 | 5_4:-1322846 | Msa0828590:CDS |
| AGAGTAGTCCGGAGTATCAG+AGG | 0.573006 | 5_4:-1322956 | Msa0828590:CDS |
| AGGATCTATTTCCTCATCCA+AGG | 0.574152 | 5_4:+1320835 | None:intergenic |
| TGAATCCGATGAAGAGAATG+AGG | 0.575070 | 5_4:-1320566 | Msa0828590:CDS |
| CTCATCCAAGGAGACTTCGT+GGG | 0.575131 | 5_4:+1320847 | None:intergenic |
| GCTTCTCGAATGTTGCAGCC+AGG | 0.578281 | 5_4:-1320283 | Msa0828590:CDS |
| TAGCTACTCATGCACACACT+TGG | 0.578398 | 5_4:-1317681 | Msa0828590:three_prime_UTR |
| ATGAGGAATATGATAAGAAG+AGG | 0.579090 | 5_4:-1323289 | Msa0828590:CDS |
| CCACGAAGTCTCCTTGGATG+AGG | 0.579818 | 5_4:-1320846 | Msa0828590:CDS |
| AACAACCAAACCCTAGAGAT+GGG | 0.579957 | 5_4:-1323632 | Msa0828590:exon |
| CAAACCCTAGAGATGGGTAG+AGG | 0.584530 | 5_4:-1323626 | Msa0828590:exon |
| TGCTTCCTCAAAATCTACAC+TGG | 0.585227 | 5_4:+1320468 | None:intergenic |
| TCAATGCTTACCTCTTGACC+TGG | 0.586308 | 5_4:+1320415 | None:intergenic |
| CACAGGTTACAAACTCGTCA+TGG | 0.587465 | 5_4:+1317770 | None:intergenic |
| AGACCGCCGTGGAGCTGACG+TGG | 0.587724 | 5_4:-1323543 | Msa0828590:CDS |
| ATAATGATAAGGAGAGAGAT+CGG | 0.588409 | 5_4:-1323337 | Msa0828590:CDS |
| AAGAACCCTTATACCTTCGA+CGG | 0.588825 | 5_4:+1323435 | None:intergenic |
| CCATCTTGAGCCAGGTCAAG+AGG | 0.591466 | 5_4:-1320425 | Msa0828590:intron |
| TTTCATTCTCCAGATAATTG+GGG | 0.592695 | 5_4:+1320680 | None:intergenic |
| GGAATTTGGATAGGGAAAGG+AGG | 0.593854 | 5_4:-1323268 | Msa0828590:CDS |
| AGAATGGTGGTGATAATGAG+AGG | 0.595271 | 5_4:-1323133 | Msa0828590:CDS |
| AGTAAGACCACCAAGACCAA+TGG | 0.596030 | 5_4:+1318001 | None:intergenic |
| ATATATGATAAGACGTGCCA+AGG | 0.604106 | 5_4:+1320078 | None:intergenic |
| TTCCGATGACAGTGTTGAAG+TGG | 0.604254 | 5_4:-1322447 | Msa0828590:CDS |
| CTAAGTTAGGGAAAAGTGGA+GGG | 0.605295 | 5_4:-1323031 | Msa0828590:CDS |
| GGATAGGGAAAGAAGGCATA+GGG | 0.605833 | 5_4:-1323381 | Msa0828590:CDS |
| GATCCTCCACGTCAGCTCCA+CGG | 0.609053 | 5_4:+1323537 | None:intergenic |
| GGGATAGGGAAAGAAGGCAT+AGG | 0.609566 | 5_4:-1323382 | Msa0828590:CDS |
| TGATGATAATGATAATGAGA+AGG | 0.610107 | 5_4:-1323228 | Msa0828590:CDS |
| AGGCTGAGCACGACTGTGTG+CGG | 0.610671 | 5_4:+1323675 | None:intergenic |
| TTCCGCCGTTTAAGTTAGCG+AGG | 0.612275 | 5_4:-1323001 | Msa0828590:CDS |
| GTGATGAAGAGAAAATCGGT+GGG | 0.612756 | 5_4:+1323707 | None:intergenic |
| ATCATATATTCGCCTGACTG+AGG | 0.612797 | 5_4:-1320064 | Msa0828590:CDS |
| GACGCGATGACGATGATAGG+AGG | 0.612992 | 5_4:-1323184 | Msa0828590:CDS |
| AGTAAAAGATCACCAACTTG+AGG | 0.613759 | 5_4:+1322723 | None:intergenic |
| GAAGGACAGGAAGAGAGAAA+GGG | 0.616059 | 5_4:-1323210 | Msa0828590:CDS |
| CTGAGCACGACTGTGTGCGG+CGG | 0.616119 | 5_4:+1323678 | None:intergenic |
| AGTGATGAAGAGAAAATCGG+TGG | 0.617418 | 5_4:+1323706 | None:intergenic |
| TAAGTTAGGGAAAAGTGGAG+GGG | 0.620618 | 5_4:-1323030 | Msa0828590:CDS |
| CTGACGTGGAGGATCTTCGC+CGG | 0.621555 | 5_4:-1323529 | Msa0828590:CDS |
| AGCGTATAAGCGTAATGACA+AGG | 0.625593 | 5_4:-1322673 | Msa0828590:intron |
| GATAGAGTTGAAAAGAATGG+TGG | 0.626095 | 5_4:-1323146 | Msa0828590:CDS |
| GAGTTGAAGAAAAGCTTGCT+GGG | 0.627690 | 5_4:-1320646 | Msa0828590:CDS |
| TCTAAGTTAGGGAAAAGTGG+AGG | 0.631512 | 5_4:-1323032 | Msa0828590:CDS |
| GGAGTATCAGAGGTTGACTT+GGG | 0.634579 | 5_4:-1322946 | Msa0828590:CDS |
| GAAGAGAAGCGAGACCGCCG+TGG | 0.638989 | 5_4:-1323554 | Msa0828590:CDS |
| GCAAGTTTCAGATTCTGACT+CGG | 0.639505 | 5_4:-1317922 | Msa0828590:CDS |
| ACTTCAACACTGTCATCGGA+AGG | 0.639702 | 5_4:+1322449 | None:intergenic |
| AAAGAAAGGGTTTCGAAACG+AGG | 0.643357 | 5_4:+1323771 | None:intergenic |
| TCGGCCTGAACTTGACCTCG+TGG | 0.644434 | 5_4:-1320888 | Msa0828590:CDS |
| TAAGTATAATGTAACAACAC+AGG | 0.648254 | 5_4:+1317564 | None:intergenic |
| CTAATCTTGTCAATCTGCGG+CGG | 0.648589 | 5_4:-1320513 | Msa0828590:CDS |
| CGAAGGAAGTGAATCGTCCG+AGG | 0.649193 | 5_4:-1323603 | Msa0828590:CDS |
| ATCGTGTATGAAGTCACAGA+TGG | 0.650101 | 5_4:-1322805 | Msa0828590:CDS |
| GAATGGTGGTGATAATGAGA+GGG | 0.653081 | 5_4:-1323132 | Msa0828590:CDS |
| GGTGAGGAAGAGGAATCAGA+GGG | 0.656246 | 5_4:-1320625 | Msa0828590:CDS |
| AGACTAATCTTGTCAATCTG+CGG | 0.657517 | 5_4:-1320516 | Msa0828590:CDS |
| GCAAATACATCCGTAAACCC+GGG | 0.659500 | 5_4:+1322777 | None:intergenic |
| AGTCACAGATGGCGTCACCC+GGG | 0.663171 | 5_4:-1322794 | Msa0828590:CDS |
| GGGATAGGGATAACCGTCGA+AGG | 0.665076 | 5_4:-1323448 | Msa0828590:CDS |
| CCGCCGTGGAGCTGACGTGG+AGG | 0.669781 | 5_4:-1323540 | Msa0828590:CDS |
| GGATTCAAAAGAATCCTGCA+TGG | 0.674975 | 5_4:+1318079 | None:intergenic |
| TGACGATGATAGGAGGAATG+GGG | 0.674999 | 5_4:-1323177 | Msa0828590:CDS |
| AAGAAAGGGTTTCGAAACGA+GGG | 0.685231 | 5_4:+1323772 | None:intergenic |
| GCATCCGGTTGCTAAATGAG+AGG | 0.690045 | 5_4:-1318115 | Msa0828590:CDS |
| ATATAAGGATGATTCCGATG+AGG | 0.702072 | 5_4:-1323306 | Msa0828590:CDS |
| CTGCAGGATCTCTCACCGAG+AGG | 0.706164 | 5_4:-1322392 | Msa0828590:CDS |
| TCTGATCTTCCTGCTCCACG+AGG | 0.706624 | 5_4:+1320873 | None:intergenic |
| TGATGAAGAGAAAATCGGTG+GGG | 0.716158 | 5_4:+1323708 | None:intergenic |
| TATCGCGCTAGAGCTGCTCA+CGG | 0.717493 | 5_4:-1322486 | Msa0828590:CDS |
| GATCTTCGCCGGAAACATCG+TGG | 0.723457 | 5_4:-1323518 | Msa0828590:CDS |
| TTGGTTGTTGTTACGTACGG+CGG | 0.725613 | 5_4:+1323646 | None:intergenic |
| CTTCGCCGGAAACATCGTGG+TGG | 0.733681 | 5_4:-1323515 | Msa0828590:CDS |
| CCTCCACGTCAGCTCCACGG+CGG | 0.748184 | 5_4:+1323540 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAATTATATTAACATG+TGG | - | chr5_4:1320561-1320580 | Msa0828590:CDS | 10.0% |
| !!! | ATTTTAATAAAATTCTGTTT+TGG | + | chr5_4:1320989-1321008 | None:intergenic | 10.0% |
| !! | TAAAAATATACGATATAAAA+TGG | + | chr5_4:1323064-1323083 | None:intergenic | 10.0% |
| !! | TAATATTACGAATATAATTC+CGG | - | chr5_4:1318453-1318472 | Msa0828590:intron | 15.0% |
| !! | AATATAACCATATAGTTAAA+GGG | + | chr5_4:1318978-1318997 | None:intergenic | 15.0% |
| !!! | AAAAGACATTTATTTTGAAA+TGG | + | chr5_4:1319244-1319263 | None:intergenic | 15.0% |
| !!! | TTCAAAATAAATGTCTTTTA+AGG | - | chr5_4:1319245-1319264 | Msa0828590:intron | 15.0% |
| !! | ATTGCTTAAAATTTGATAAA+AGG | - | chr5_4:1321428-1321447 | Msa0828590:intron | 15.0% |
| !!! | AAATATTTTTCATGTTTTGA+TGG | + | chr5_4:1322104-1322123 | None:intergenic | 15.0% |
| !!! | ATATACAAGTTGTTTTATTA+TGG | - | chr5_4:1322167-1322186 | Msa0828590:intron | 15.0% |
| !! | ATATAAAATGGAAATATCTT+GGG | + | chr5_4:1323052-1323071 | None:intergenic | 15.0% |
| !!! | TTTCCAATTTTACTTTTAGT+CGG | - | chr5_4:1318702-1318721 | Msa0828590:intron | 20.0% |
| !! | CAATATAACCATATAGTTAA+AGG | + | chr5_4:1318979-1318998 | None:intergenic | 20.0% |
| !! | TTATGAATCATACTATTCTT+TGG | - | chr5_4:1319073-1319092 | Msa0828590:intron | 20.0% |
| !!! | AAAGATAGGTAAATGATTTT+TGG | - | chr5_4:1319122-1319141 | Msa0828590:intron | 20.0% |
| !!! | TGAAGTAAAAGTAATGTTTT+GGG | - | chr5_4:1319372-1319391 | Msa0828590:intron | 20.0% |
| !!! | GAGTGTTACTTTATAATAAT+AGG | - | chr5_4:1319600-1319619 | Msa0828590:intron | 20.0% |
| !!! | TACCTTAATTTTTGGTAATT+TGG | - | chr5_4:1319718-1319737 | Msa0828590:intron | 20.0% |
| !! | ATTTATATAATCTCTTGTGT+TGG | - | chr5_4:1319850-1319869 | Msa0828590:intron | 20.0% |
| !!! | AGTTAGATTTATAATTTTGC+AGG | - | chr5_4:1319984-1320003 | Msa0828590:intron | 20.0% |
| !!! | TCTTTTGTATGGTATTTTAA+AGG | - | chr5_4:1320354-1320373 | Msa0828590:intron | 20.0% |
| !! | AACAAATAAATTGAGAAATG+TGG | - | chr5_4:1321188-1321207 | Msa0828590:intron | 20.0% |
| !! | TAAGAATCTGAACAAAATTT+AGG | - | chr5_4:1321454-1321473 | Msa0828590:intron | 20.0% |
| !! | TGAAATGTTAAATAGAAAGA+TGG | + | chr5_4:1321886-1321905 | None:intergenic | 20.0% |
| !! | TTGTAAAGAAGAGAATATTA+TGG | + | chr5_4:1321948-1321967 | None:intergenic | 20.0% |
| !!! | GAGAAATTTTAAAAAAGGAT+GGG | + | chr5_4:1322524-1322543 | None:intergenic | 20.0% |
| !!! | TGAGAAATTTTAAAAAAGGA+TGG | + | chr5_4:1322525-1322544 | None:intergenic | 20.0% |
| !! | TCTACTAAAAAAAAAACTCA+TGG | + | chr5_4:1322736-1322755 | None:intergenic | 20.0% |
| !! | GATATAAAATGGAAATATCT+TGG | + | chr5_4:1323053-1323072 | None:intergenic | 20.0% |
| !! | TTCAAATATTTGAAAAACAC+AGG | + | chr5_4:1323577-1323596 | None:intergenic | 20.0% |
| !!! | GTACAATTGAATTTTGTTTT+TGG | - | chr5_4:1323676-1323695 | Msa0828590:five_prime_UTR | 20.0% |
| !! | TAGGGATAATGATAATGATA+AGG | - | chr5_4:1317979-1317998 | Msa0828590:CDS | 25.0% |
| ! | ATATGATAAGAAGAGGAATT+TGG | - | chr5_4:1318045-1318064 | Msa0828590:CDS | 25.0% |
| !! | TGATGATAATGATAATGAGA+AGG | - | chr5_4:1318099-1318118 | Msa0828590:CDS | 25.0% |
| !!! | TATTAATGGATTGGTGAATA+AGG | - | chr5_4:1318420-1318439 | Msa0828590:intron | 25.0% |
| ! | AAACCGACTAAAAGTAAAAT+TGG | + | chr5_4:1318708-1318727 | None:intergenic | 25.0% |
| !!! | CTTTTAGTCGGTTTTTAATT+TGG | - | chr5_4:1318714-1318733 | Msa0828590:intron | 25.0% |
| ! | AAAACATGGTAAAGAAAGAT+AGG | - | chr5_4:1319108-1319127 | Msa0828590:intron | 25.0% |
| ! | TAACATAATTTCATGCACAT+GGG | + | chr5_4:1319213-1319232 | None:intergenic | 25.0% |
| ! | ATAACATAATTTCATGCACA+TGG | + | chr5_4:1319214-1319233 | None:intergenic | 25.0% |
| !!! | GACATTTATTTTGAAATGGA+GGG | + | chr5_4:1319240-1319259 | None:intergenic | 25.0% |
| !!! | AGACATTTATTTTGAAATGG+AGG | + | chr5_4:1319241-1319260 | None:intergenic | 25.0% |
| ! | AAATGCAATGATTAGAAGAA+AGG | - | chr5_4:1319287-1319306 | Msa0828590:intron | 25.0% |
| ! | AATGCAATGATTAGAAGAAA+GGG | - | chr5_4:1319288-1319307 | Msa0828590:intron | 25.0% |
| ! | TAAAGAAACCAATAGTTGAT+GGG | + | chr5_4:1319337-1319356 | None:intergenic | 25.0% |
| !! | GTGAAGTAAAAGTAATGTTT+TGG | - | chr5_4:1319371-1319390 | Msa0828590:intron | 25.0% |
| ! | AGGTGTGATTAATATTTCAT+TGG | - | chr5_4:1319423-1319442 | Msa0828590:intron | 25.0% |
| !! | AACTTCTGTACCTTAATTTT+TGG | - | chr5_4:1319710-1319729 | Msa0828590:intron | 25.0% |
| ! | CACCAAATTACCAAAAATTA+AGG | + | chr5_4:1319723-1319742 | None:intergenic | 25.0% |
| !! | AGGTACACTATTTTATTGTT+TGG | - | chr5_4:1320108-1320127 | Msa0828590:CDS | 25.0% |
| !! | GGTACACTATTTTATTGTTT+GGG | - | chr5_4:1320109-1320128 | Msa0828590:CDS | 25.0% |
| !! | GTACACTATTTTATTGTTTG+GGG | - | chr5_4:1320110-1320129 | Msa0828590:CDS | 25.0% |
| ! | GAAAATAGAAAATGTACCAA+GGG | + | chr5_4:1320525-1320544 | None:intergenic | 25.0% |
| ! | TGAAAATAGAAAATGTACCA+AGG | + | chr5_4:1320526-1320545 | None:intergenic | 25.0% |
| !! | TTTTCATTCTCCAGATAATT+GGG | + | chr5_4:1320651-1320670 | None:intergenic | 25.0% |
| ! | AGAACTTATCTCAGATATTA+CGG | - | chr5_4:1321069-1321088 | Msa0828590:intron | 25.0% |
| !!! | AAATTTTTTGCTCATTTGCT+CGG | - | chr5_4:1321213-1321232 | Msa0828590:intron | 25.0% |
| ! | ATTTATTAAGATTCTCTTCC+AGG | - | chr5_4:1321311-1321330 | Msa0828590:CDS | 25.0% |
| !!! | GAATATGTGCTTTTAAAACT+TGG | + | chr5_4:1321405-1321424 | None:intergenic | 25.0% |
| !!! | TCCAAACTGTTGTTTTTATT+TGG | - | chr5_4:1321485-1321504 | Msa0828590:intron | 25.0% |
| ! | ACCAAATAAAAACAACAGTT+TGG | + | chr5_4:1321489-1321508 | None:intergenic | 25.0% |
| !!! | TATTTGGTTTTTTGTATGCT+AGG | - | chr5_4:1321501-1321520 | Msa0828590:intron | 25.0% |
| ! | AAAAATTCCAAAGAAAAGAG+AGG | - | chr5_4:1321577-1321596 | Msa0828590:intron | 25.0% |
| ! | CTATTACTGTTGTTAAGAAT+TGG | + | chr5_4:1321742-1321761 | None:intergenic | 25.0% |
| !! | AAGCATAAGTGAAAAAGTAT+AGG | + | chr5_4:1321770-1321789 | None:intergenic | 25.0% |
| ! | TAAAGAAGAGAATATTATGG+TGG | + | chr5_4:1321945-1321964 | None:intergenic | 25.0% |
| !!! | TGGGTGAGAAATTTTAAAAA+AGG | + | chr5_4:1322529-1322548 | None:intergenic | 25.0% |
| !! | GCATCTTAACAATTTTATTC+AGG | - | chr5_4:1322585-1322604 | Msa0828590:intron | 25.0% |
| !!! | ATCAATTTTTTCACATCCAT+TGG | - | chr5_4:1323310-1323329 | Msa0828590:CDS | 25.0% |
| ! | AGTATTTGAAAAATATGCCA+AGG | - | chr5_4:1323362-1323381 | Msa0828590:CDS | 25.0% |
| !! | TTTCTTCACCTTTTATGTTA+TGG | - | chr5_4:1323705-1323724 | Msa0828590:five_prime_UTR | 25.0% |
| ! | TAAGTATAATGTAACAACAC+AGG | + | chr5_4:1323766-1323785 | None:intergenic | 25.0% |
| GATTTCTGAATGGAAAGAAA+GGG | + | chr5_4:1317572-1317591 | None:intergenic | 30.0% | |
| AGATTTCTGAATGGAAAGAA+AGG | + | chr5_4:1317573-1317592 | None:intergenic | 30.0% | |
| ! | CGAGATTTAAGATTTCTGAA+TGG | + | chr5_4:1317582-1317601 | None:intergenic | 30.0% |
| ! | AAGTTGATCGAAAAAGGAAT+AGG | - | chr5_4:1317852-1317871 | Msa0828590:CDS | 30.0% |
| AGTTGATCGAAAAAGGAATA+GGG | - | chr5_4:1317853-1317872 | Msa0828590:CDS | 30.0% | |
| ATAATGATAAGGAGAGAGAT+CGG | - | chr5_4:1317990-1318009 | Msa0828590:CDS | 30.0% | |
| CTTCTTATCATATTCCTCAT+CGG | + | chr5_4:1318038-1318057 | None:intergenic | 30.0% | |
| ATGAGGAATATGATAAGAAG+AGG | - | chr5_4:1318038-1318057 | Msa0828590:CDS | 30.0% | |
| ATAAGAAGAGGAATTTGGAT+AGG | - | chr5_4:1318050-1318069 | Msa0828590:CDS | 30.0% | |
| TAAGAAGAGGAATTTGGATA+GGG | - | chr5_4:1318051-1318070 | Msa0828590:CDS | 30.0% | |
| ! | ATAATGATAATGAGAAGGAC+AGG | - | chr5_4:1318104-1318123 | Msa0828590:CDS | 30.0% |
| !! | GCTTTAAGGAAGAGTATTAA+TGG | - | chr5_4:1318406-1318425 | Msa0828590:intron | 30.0% |
| !! | AAGGAAGAGTATTAATGGAT+TGG | - | chr5_4:1318411-1318430 | Msa0828590:intron | 30.0% |
| !!! | AAGTTGGTGATCTTTTACTT+AGG | - | chr5_4:1318608-1318627 | Msa0828590:intron | 30.0% |
| ! | GAGTTTTCCCTTTAACTATA+TGG | - | chr5_4:1318968-1318987 | Msa0828590:intron | 30.0% |
| CAAAATACAGACAAGAGAAA+GGG | + | chr5_4:1319039-1319058 | None:intergenic | 30.0% | |
| TCAAAATACAGACAAGAGAA+AGG | + | chr5_4:1319040-1319059 | None:intergenic | 30.0% | |
| !! | AATAGTTGATGGGGATAATT+TGG | + | chr5_4:1319327-1319346 | None:intergenic | 30.0% |
| AAATTATCCCCATCAACTAT+TGG | - | chr5_4:1319326-1319345 | Msa0828590:intron | 30.0% | |
| ! | AAAGAAACCAATAGTTGATG+GGG | + | chr5_4:1319336-1319355 | None:intergenic | 30.0% |
| GTAAAGAAACCAATAGTTGA+TGG | + | chr5_4:1319338-1319357 | None:intergenic | 30.0% | |
| !! | TTTTGGGAGTAGTGTATATA+AGG | - | chr5_4:1319388-1319407 | Msa0828590:intron | 30.0% |
| TTTGGGAGTAGTGTATATAA+GGG | - | chr5_4:1319389-1319408 | Msa0828590:intron | 30.0% | |
| ! | AGTGTATATAAGGGTATAAC+TGG | - | chr5_4:1319398-1319417 | Msa0828590:intron | 30.0% |
| ! | ATATAAGGGTATAACTGGAA+AGG | - | chr5_4:1319403-1319422 | Msa0828590:intron | 30.0% |
| !! | TCAAAATGAGTGTCACTTTA+GGG | + | chr5_4:1319486-1319505 | None:intergenic | 30.0% |
| !! | TTCAAAATGAGTGTCACTTT+AGG | + | chr5_4:1319487-1319506 | None:intergenic | 30.0% |
| !! | ACACTCATTTTGAAAACAGA+GGG | - | chr5_4:1319493-1319512 | Msa0828590:intron | 30.0% |
| ! | AGAAAGTAAGTTTTTCCAAC+AGG | - | chr5_4:1319745-1319764 | Msa0828590:intron | 30.0% |
| ! | GAAAGTAAGTTTTTCCAACA+GGG | - | chr5_4:1319746-1319765 | Msa0828590:intron | 30.0% |
| ! | AAAGTAAGTTTTTCCAACAG+GGG | - | chr5_4:1319747-1319766 | Msa0828590:intron | 30.0% |
| TATCATGACAACTGCAAAAA+TGG | + | chr5_4:1319792-1319811 | None:intergenic | 30.0% | |
| ! | TGTCATGATATGTTTAGAAC+TGG | - | chr5_4:1319802-1319821 | Msa0828590:intron | 30.0% |
| ! | GTCATGATATGTTTAGAACT+GGG | - | chr5_4:1319803-1319822 | Msa0828590:intron | 30.0% |
| GTATGCATAAATTTGTACAG+AGG | + | chr5_4:1319880-1319899 | None:intergenic | 30.0% | |
| ! | GCATCATTTTCACAAATACA+CGG | + | chr5_4:1319930-1319949 | None:intergenic | 30.0% |
| CGTGTTCAATTTCTAATTGA+AGG | - | chr5_4:1320056-1320075 | Msa0828590:CDS | 30.0% | |
| AGGATTATTTGCCATAAGAA+AGG | - | chr5_4:1320076-1320095 | Msa0828590:CDS | 30.0% | |
| ! | ACAGAATCAGTGTTGTTAAA+TGG | - | chr5_4:1320157-1320176 | Msa0828590:CDS | 30.0% |
| GTTATATCACTATTGCATAG+CGG | - | chr5_4:1320268-1320287 | Msa0828590:CDS | 30.0% | |
| ! | ACATTGTCAACTCTTTTGTA+TGG | - | chr5_4:1320343-1320362 | Msa0828590:intron | 30.0% |
| TTTCATTCTCCAGATAATTG+GGG | + | chr5_4:1320650-1320669 | None:intergenic | 30.0% | |
| ! | CTTTTCATTCTCCAGATAAT+TGG | + | chr5_4:1320652-1320671 | None:intergenic | 30.0% |
| !!! | AATTTTTTGCTCATTTGCTC+GGG | - | chr5_4:1321214-1321233 | Msa0828590:intron | 30.0% |
| TCTTAACAACAGTAATAGCT+TGG | - | chr5_4:1321744-1321763 | Msa0828590:intron | 30.0% | |
| !! | TCACTTATGCTTTTAACTAC+TGG | - | chr5_4:1321778-1321797 | Msa0828590:intron | 30.0% |
| !! | CACTTATGCTTTTAACTACT+GGG | - | chr5_4:1321779-1321798 | Msa0828590:intron | 30.0% |
| GATAAAAGCAATAAAAACCC+AGG | + | chr5_4:1321830-1321849 | None:intergenic | 30.0% | |
| !! | GAATATTATGGTGGATGAAT+GGG | + | chr5_4:1321936-1321955 | None:intergenic | 30.0% |
| !! | AGAATATTATGGTGGATGAA+TGG | + | chr5_4:1321937-1321956 | None:intergenic | 30.0% |
| CATTGAGCTAACATTCTTAT+TGG | - | chr5_4:1321968-1321987 | Msa0828590:intron | 30.0% | |
| ACGGTATAGTTGTATACTAA+TGG | - | chr5_4:1322031-1322050 | Msa0828590:intron | 30.0% | |
| ! | TTTATTATCAGACTAGCCAA+TGG | - | chr5_4:1322056-1322075 | Msa0828590:intron | 30.0% |
| TTCAAATCAAATGGACGAAA+TGG | + | chr5_4:1322231-1322250 | None:intergenic | 30.0% | |
| ATTGAAAACTAGAGTAATGG+AGG | + | chr5_4:1322390-1322409 | None:intergenic | 30.0% | |
| !!! | TCCATTACTCTAGTTTTCAA+TGG | - | chr5_4:1322389-1322408 | Msa0828590:CDS | 30.0% |
| AAAATACTTCCTTGAGAGAT+GGG | + | chr5_4:1322548-1322567 | None:intergenic | 30.0% | |
| ! | TTAGTAGACCAATGTTTTTC+TGG | - | chr5_4:1322748-1322767 | Msa0828590:CDS | 30.0% |
| ! | GAGTTTTACTGGTGAAAAAA+AGG | + | chr5_4:1322823-1322842 | None:intergenic | 30.0% |
| TGCATGTTGCATGAATATAT+TGG | - | chr5_4:1322996-1323015 | Msa0828590:CDS | 30.0% | |
| ATGTTGCATGAATATATTGG+TGG | - | chr5_4:1322999-1323018 | Msa0828590:CDS | 30.0% | |
| TTGTTCTCTTATATCATGTG+TGG | - | chr5_4:1323089-1323108 | Msa0828590:CDS | 30.0% | |
| TGTTCTCTTATATCATGTGT+GGG | - | chr5_4:1323090-1323109 | Msa0828590:CDS | 30.0% | |
| !! | ATTTCATTTTTCAATGCTGC+AGG | - | chr5_4:1323171-1323190 | Msa0828590:CDS | 30.0% |
| !! | TTTTGAATCCATTTTTCCCA+AGG | - | chr5_4:1323261-1323280 | Msa0828590:CDS | 30.0% |
| TGACAACACCATAACATAAA+AGG | + | chr5_4:1323716-1323735 | None:intergenic | 30.0% | |
| GAGAGTGATGAAGAGAAAAT+CGG | + | chr5_4:1317627-1317646 | None:intergenic | 35.0% | |
| ! | AGGAAGAAGTTGATCGAAAA+AGG | - | chr5_4:1317846-1317865 | Msa0828590:CDS | 35.0% |
| ATCGAAAAAGGAATAGGGAT+AGG | - | chr5_4:1317858-1317877 | Msa0828590:CDS | 35.0% | |
| TCGAAAAAGGAATAGGGATA+GGG | - | chr5_4:1317859-1317878 | Msa0828590:CDS | 35.0% | |
| AACGTGATGTGAAGAGAATT+AGG | - | chr5_4:1317924-1317943 | Msa0828590:CDS | 35.0% | |
| ACGTGATGTGAAGAGAATTA+GGG | - | chr5_4:1317925-1317944 | Msa0828590:CDS | 35.0% | |
| ATGTGAAGAGAATTAGGGAT+AGG | - | chr5_4:1317930-1317949 | Msa0828590:CDS | 35.0% | |
| TGTGAAGAGAATTAGGGATA+GGG | - | chr5_4:1317931-1317950 | Msa0828590:CDS | 35.0% | |
| ATATAAGGATGATTCCGATG+AGG | - | chr5_4:1318021-1318040 | Msa0828590:CDS | 35.0% | |
| AGGGATAGAGTTGAAAAGAA+TGG | - | chr5_4:1318178-1318197 | Msa0828590:intron | 35.0% | |
| GATAGAGTTGAAAAGAATGG+TGG | - | chr5_4:1318181-1318200 | Msa0828590:intron | 35.0% | |
| GGAAGAAAGTAAGAAGAAAG+AGG | - | chr5_4:1318216-1318235 | Msa0828590:intron | 35.0% | |
| GAAAGTAAGAAGAAAGAGGA+AGG | - | chr5_4:1318220-1318239 | Msa0828590:intron | 35.0% | |
| ATCATCCTCGCTAACTTAAA+CGG | + | chr5_4:1318334-1318353 | None:intergenic | 35.0% | |
| TATAATTCCGGAGTTGTTTG+CGG | - | chr5_4:1318465-1318484 | Msa0828590:intron | 35.0% | |
| ! | AGAATTTGATTCGTGGAAGA+GGG | - | chr5_4:1318488-1318507 | Msa0828590:intron | 35.0% |
| AGTAAAAGATCACCAACTTG+AGG | + | chr5_4:1318607-1318626 | None:intergenic | 35.0% | |
| !! | TTGGTGATCTTTTACTTAGG+AGG | - | chr5_4:1318611-1318630 | Msa0828590:intron | 35.0% |
| GTAAAATTGGAAAACACGCA+AGG | + | chr5_4:1318695-1318714 | None:intergenic | 35.0% | |
| ! | GGCTTGTATTTCTGAAAACA+TGG | - | chr5_4:1319094-1319113 | Msa0828590:intron | 35.0% |
| !! | CAAAATGAGTGTCACTTTAG+GGG | + | chr5_4:1319485-1319504 | None:intergenic | 35.0% |
| !! | GACACTCATTTTGAAAACAG+AGG | - | chr5_4:1319492-1319511 | Msa0828590:intron | 35.0% |
| AGTAGTTTGAAGGATGACTA+AGG | - | chr5_4:1319516-1319535 | Msa0828590:intron | 35.0% | |
| !! | TTGGTGGTTTGCTAGAAAAT+AGG | - | chr5_4:1319547-1319566 | Msa0828590:intron | 35.0% |
| TAGAATCAGTTAAGGGATTC+AGG | + | chr5_4:1319628-1319647 | None:intergenic | 35.0% | |
| ! | TCCCTTAACTGATTCTACTT+CGG | - | chr5_4:1319631-1319650 | Msa0828590:intron | 35.0% |
| ! | TTTTTCCAACAGGGGTTATA+AGG | - | chr5_4:1319755-1319774 | Msa0828590:intron | 35.0% |
| !! | CTGCAAAAATGGTTTTGCTT+GGG | + | chr5_4:1319781-1319800 | None:intergenic | 35.0% |
| !! | ACTGCAAAAATGGTTTTGCT+TGG | + | chr5_4:1319782-1319801 | None:intergenic | 35.0% |
| !! | ATGCAGAAGTATTCTAATGC+AGG | - | chr5_4:1319900-1319919 | Msa0828590:intron | 35.0% |
| ! | CATTTTCACAAATACACGGA+TGG | + | chr5_4:1319926-1319945 | None:intergenic | 35.0% |
| CTGAAACTTTGCCTTTCTTA+TGG | + | chr5_4:1320090-1320109 | None:intergenic | 35.0% | |
| CATAAGAAAGGCAAAGTTTC+AGG | - | chr5_4:1320088-1320107 | Msa0828590:CDS | 35.0% | |
| !! | ACTATTTTATTGTTTGGGGC+AGG | - | chr5_4:1320114-1320133 | Msa0828590:CDS | 35.0% |
| AACTATAAAGCAGCGGAATT+TGG | - | chr5_4:1320183-1320202 | Msa0828590:CDS | 35.0% | |
| TGTTGTCAAATCACAGATAG+CGG | + | chr5_4:1320317-1320336 | None:intergenic | 35.0% | |
| ATGATTGTGTTGCACTTACA+GGG | - | chr5_4:1320404-1320423 | Msa0828590:intron | 35.0% | |
| AGACTAATCTTGTCAATCTG+CGG | - | chr5_4:1320811-1320830 | Msa0828590:intron | 35.0% | |
| ! | AATGTCCAGTGTAGATTTTG+AGG | - | chr5_4:1320854-1320873 | Msa0828590:CDS | 35.0% |
| TCAGATATTACGGTCTTCTA+GGG | - | chr5_4:1321079-1321098 | Msa0828590:intron | 35.0% | |
| ATTTATTTGTTTCGAGCCTG+TGG | + | chr5_4:1321179-1321198 | None:intergenic | 35.0% | |
| ATATATGATAAGACGTGCCA+AGG | + | chr5_4:1321252-1321271 | None:intergenic | 35.0% | |
| !! | GTTTTGTTCTTTTGTTTGCG+AGG | + | chr5_4:1321612-1321631 | None:intergenic | 35.0% |
| TTTATGTACCCAACCTTAAG+TGG | + | chr5_4:1321671-1321690 | None:intergenic | 35.0% | |
| GATGCCATAATATCCTATGA+TGG | - | chr5_4:1321696-1321715 | Msa0828590:intron | 35.0% | |
| CGATCCATCATAGGATATTA+TGG | + | chr5_4:1321703-1321722 | None:intergenic | 35.0% | |
| !! | TAATATCCTATGATGGATCG+TGG | - | chr5_4:1321703-1321722 | Msa0828590:intron | 35.0% |
| ! | TTTTATATGTTCAGCCTTCC+TGG | - | chr5_4:1321809-1321828 | Msa0828590:intron | 35.0% |
| TTTATATGTTCAGCCTTCCT+GGG | - | chr5_4:1321810-1321829 | Msa0828590:intron | 35.0% | |
| AAAGCAATAAAAACCCAGGA+AGG | + | chr5_4:1321826-1321845 | None:intergenic | 35.0% | |
| ACACAAGACATGATACACTT+AGG | + | chr5_4:1321912-1321931 | None:intergenic | 35.0% | |
| AAATCAAATGGACGAAATGG+AGG | + | chr5_4:1322228-1322247 | None:intergenic | 35.0% | |
| AACGTTGGGTTCAAATCAAA+TGG | + | chr5_4:1322240-1322259 | None:intergenic | 35.0% | |
| CATGGGAGATATAAAACGTT+GGG | + | chr5_4:1322254-1322273 | None:intergenic | 35.0% | |
| TCATGGGAGATATAAAACGT+TGG | + | chr5_4:1322255-1322274 | None:intergenic | 35.0% | |
| ! | ATCTCCCATGATGTTGTTTA+TGG | - | chr5_4:1322264-1322283 | Msa0828590:intron | 35.0% |
| TCTGCCATAAACAACATCAT+GGG | + | chr5_4:1322271-1322290 | None:intergenic | 35.0% | |
| ATCTGCCATAAACAACATCA+TGG | + | chr5_4:1322272-1322291 | None:intergenic | 35.0% | |
| GCCATTGAAAACTAGAGTAA+TGG | + | chr5_4:1322393-1322412 | None:intergenic | 35.0% | |
| ! | AAGGATGGGCAAAACTATTT+TGG | + | chr5_4:1322510-1322529 | None:intergenic | 35.0% |
| CAAAATACTTCCTTGAGAGA+TGG | + | chr5_4:1322549-1322568 | None:intergenic | 35.0% | |
| AGCTTAGCTAAAAAACCACT+GGG | + | chr5_4:1322665-1322684 | None:intergenic | 35.0% | |
| ! | CATTCACAAGTGAGTTTTAC+TGG | + | chr5_4:1322834-1322853 | None:intergenic | 35.0% |
| AATATATTGGTGGAGCAGTT+TGG | - | chr5_4:1323009-1323028 | Msa0828590:CDS | 35.0% | |
| TTAACCTCTCATTTAGCAAC+CGG | + | chr5_4:1323219-1323238 | None:intergenic | 35.0% | |
| !! | TGCAGAATCGTGTGTTTTTA+GGG | + | chr5_4:1323291-1323310 | None:intergenic | 35.0% |
| ! | ATGCAGAATCGTGTGTTTTT+AGG | + | chr5_4:1323292-1323311 | None:intergenic | 35.0% |
| !! | TTTTTCACATCCATTGGTCT+TGG | - | chr5_4:1323316-1323335 | Msa0828590:CDS | 35.0% |
| AAGAAAGGGTTTCGAAACGA+GGG | + | chr5_4:1317558-1317577 | None:intergenic | 40.0% | |
| AAAGAAAGGGTTTCGAAACG+AGG | + | chr5_4:1317559-1317578 | None:intergenic | 40.0% | |
| TGATGAAGAGAAAATCGGTG+GGG | + | chr5_4:1317622-1317641 | None:intergenic | 40.0% | |
| GTGATGAAGAGAAAATCGGT+GGG | + | chr5_4:1317623-1317642 | None:intergenic | 40.0% | |
| AGTGATGAAGAGAAAATCGG+TGG | + | chr5_4:1317624-1317643 | None:intergenic | 40.0% | |
| ! | GGTTTGGTTGTTGTTACGTA+CGG | + | chr5_4:1317687-1317706 | None:intergenic | 40.0% |
| AACAACCAAACCCTAGAGAT+GGG | - | chr5_4:1317695-1317714 | Msa0828590:three_prime_UTR | 40.0% | |
| AAAGGAATAGGGATAGGGAT+AGG | - | chr5_4:1317864-1317883 | Msa0828590:CDS | 40.0% | |
| AAGGAATAGGGATAGGGATA+GGG | - | chr5_4:1317865-1317884 | Msa0828590:CDS | 40.0% | |
| ! | GATAACCGTCGAAGGTATAA+GGG | - | chr5_4:1317887-1317906 | Msa0828590:CDS | 40.0% |
| AAGAACCCTTATACCTTCGA+CGG | + | chr5_4:1317895-1317914 | None:intergenic | 40.0% | |
| GAATTAGGGATAGGGAAAGA+AGG | - | chr5_4:1317939-1317958 | Msa0828590:CDS | 40.0% | |
| AGAGGAATTTGGATAGGGAA+AGG | - | chr5_4:1318056-1318075 | Msa0828590:CDS | 40.0% | |
| ! | AAAGGAGGCATAGAGTTGAT+AGG | - | chr5_4:1318074-1318093 | Msa0828590:CDS | 40.0% |
| !! | AAGGAGGCATAGAGTTGATA+GGG | - | chr5_4:1318075-1318094 | Msa0828590:CDS | 40.0% |
| ATGACGATGATAGGAGGAAT+GGG | - | chr5_4:1318149-1318168 | Msa0828590:intron | 40.0% | |
| ! | AGAATGGTGGTGATAATGAG+AGG | - | chr5_4:1318194-1318213 | Msa0828590:intron | 40.0% |
| ! | GAATGGTGGTGATAATGAGA+GGG | - | chr5_4:1318195-1318214 | Msa0828590:intron | 40.0% |
| AAGAAGAAAGAGGAAGGAAG+TGG | - | chr5_4:1318226-1318245 | Msa0828590:intron | 40.0% | |
| AGAAGAAAGAGGAAGGAAGT+GGG | - | chr5_4:1318227-1318246 | Msa0828590:intron | 40.0% | |
| ATACCGGCAAGTGTGATAAA+TGG | - | chr5_4:1318265-1318284 | Msa0828590:intron | 40.0% | |
| AATGGCGATGCATCTAAGTT+AGG | - | chr5_4:1318283-1318302 | Msa0828590:intron | 40.0% | |
| ATGGCGATGCATCTAAGTTA+GGG | - | chr5_4:1318284-1318303 | Msa0828590:intron | 40.0% | |
| GCATCTAAGTTAGGGAAAAG+TGG | - | chr5_4:1318292-1318311 | Msa0828590:intron | 40.0% | |
| TCTAAGTTAGGGAAAAGTGG+AGG | - | chr5_4:1318295-1318314 | Msa0828590:intron | 40.0% | |
| CTAAGTTAGGGAAAAGTGGA+GGG | - | chr5_4:1318296-1318315 | Msa0828590:intron | 40.0% | |
| TAAGTTAGGGAAAAGTGGAG+GGG | - | chr5_4:1318297-1318316 | Msa0828590:intron | 40.0% | |
| TAAGTTAGCGAGGATGATGA+AGG | - | chr5_4:1318336-1318355 | Msa0828590:intron | 40.0% | |
| AGTTGACGATAAGAGTAGTC+CGG | - | chr5_4:1318360-1318379 | Msa0828590:intron | 40.0% | |
| AAATTCTCCGCAAACAACTC+CGG | + | chr5_4:1318475-1318494 | None:intergenic | 40.0% | |
| ! | TTTGCGGAGAATTTGATTCG+TGG | - | chr5_4:1318481-1318500 | Msa0828590:intron | 40.0% |
| ! | GAGAATTTGATTCGTGGAAG+AGG | - | chr5_4:1318487-1318506 | Msa0828590:intron | 40.0% |
| ATCGTGTATGAAGTCACAGA+TGG | - | chr5_4:1318522-1318541 | Msa0828590:intron | 40.0% | |
| AGCAAATACATCCGTAAACC+CGG | + | chr5_4:1318554-1318573 | None:intergenic | 40.0% | |
| AACACGAAGTTTCCTCAAGT+TGG | - | chr5_4:1318592-1318611 | Msa0828590:intron | 40.0% | |
| AGCGTATAAGCGTAATGACA+AGG | - | chr5_4:1318654-1318673 | Msa0828590:intron | 40.0% | |
| TTCACAGCAGCAAGTAATTG+AGG | + | chr5_4:1318779-1318798 | None:intergenic | 40.0% | |
| TGTGAAGTTTGTAGCACATC+TGG | - | chr5_4:1318793-1318812 | Msa0828590:intron | 40.0% | |
| !!! | GTTGGTTTTGTGACAGAATG+TGG | - | chr5_4:1318905-1318924 | Msa0828590:intron | 40.0% |
| AAACAGAGGGAGTAGTTTGA+AGG | - | chr5_4:1319506-1319525 | Msa0828590:intron | 40.0% | |
| GATGACTAAGGCATGATGAT+TGG | - | chr5_4:1319528-1319547 | Msa0828590:intron | 40.0% | |
| CCCGAAGTAGAATCAGTTAA+GGG | + | chr5_4:1319635-1319654 | None:intergenic | 40.0% | |
| ! | CCCTTAACTGATTCTACTTC+GGG | - | chr5_4:1319632-1319651 | Msa0828590:intron | 40.0% |
| ! | CCTTAACTGATTCTACTTCG+GGG | - | chr5_4:1319633-1319652 | Msa0828590:intron | 40.0% |
| TTTCGTGGAATTCTGCATGA+AGG | - | chr5_4:1320020-1320039 | Msa0828590:CDS | 40.0% | |
| ATGGTGCAACTATAAAGCAG+CGG | - | chr5_4:1320176-1320195 | Msa0828590:CDS | 40.0% | |
| GATGATTGTGTTGCACTTAC+AGG | - | chr5_4:1320403-1320422 | Msa0828590:intron | 40.0% | |
| AGGATCTATTTCCTCATCCA+AGG | + | chr5_4:1320495-1320514 | None:intergenic | 40.0% | |
| ATTCTCCAGATAATTGGGGT+CGG | + | chr5_4:1320646-1320665 | None:intergenic | 40.0% | |
| AGAGTTGAAGAAAAGCTTGC+TGG | - | chr5_4:1320680-1320699 | Msa0828590:CDS | 40.0% | |
| ! | GAGTTGAAGAAAAGCTTGCT+GGG | - | chr5_4:1320681-1320700 | Msa0828590:CDS | 40.0% |
| TGAATCCGATGAAGAGAATG+AGG | - | chr5_4:1320761-1320780 | Msa0828590:intron | 40.0% | |
| AGCTTCCTCATTCTCTTCAT+CGG | + | chr5_4:1320769-1320788 | None:intergenic | 40.0% | |
| TGCTTCCTCAAAATCTACAC+TGG | + | chr5_4:1320862-1320881 | None:intergenic | 40.0% | |
| !! | AGTGTAGATTTTGAGGAAGC+AGG | - | chr5_4:1320861-1320880 | Msa0828590:CDS | 40.0% |
| CTAAAAATCCATCTTGAGCC+AGG | - | chr5_4:1320894-1320913 | Msa0828590:CDS | 40.0% | |
| ! | TTGTGTGTCATTGATGCAGA+TGG | - | chr5_4:1321008-1321027 | Msa0828590:intron | 40.0% |
| ! | ATCTGAGATAAGTTCTCTCC+TGG | + | chr5_4:1321065-1321084 | None:intergenic | 40.0% |
| CTCAGATATTACGGTCTTCT+AGG | - | chr5_4:1321078-1321097 | Msa0828590:intron | 40.0% | |
| AGCAGTATTCATTGATCCAC+AGG | - | chr5_4:1321160-1321179 | Msa0828590:intron | 40.0% | |
| ATCATATATTCGCCTGACTG+AGG | - | chr5_4:1321263-1321282 | Msa0828590:intron | 40.0% | |
| TTGAGTTCGATTCAAGTACC+TGG | + | chr5_4:1321332-1321351 | None:intergenic | 40.0% | |
| TCCAAAGAAAAGAGAGGACA+AGG | - | chr5_4:1321583-1321602 | Msa0828590:intron | 40.0% | |
| ! | TCCTTGTCCTCTCTTTTCTT+TGG | + | chr5_4:1321587-1321606 | None:intergenic | 40.0% |
| ATGATGAGCATAGGTTCCAT+TGG | + | chr5_4:1322075-1322094 | None:intergenic | 40.0% | |
| AATGGAACCTATGCTCATCA+TGG | - | chr5_4:1322074-1322093 | Msa0828590:intron | 40.0% | |
| ATGGAACCTATGCTCATCAT+GGG | - | chr5_4:1322075-1322094 | Msa0828590:intron | 40.0% | |
| TTCCTGAACAAGTGACAACA+TGG | - | chr5_4:1322122-1322141 | Msa0828590:intron | 40.0% | |
| ! | TTCCATGTTGTCACTTGTTC+AGG | + | chr5_4:1322127-1322146 | None:intergenic | 40.0% |
| ! | GCATACCAATGCTGCTATTT+AGG | - | chr5_4:1322431-1322450 | Msa0828590:CDS | 40.0% |
| AACAGCCTAAATAGCAGCAT+TGG | + | chr5_4:1322439-1322458 | None:intergenic | 40.0% | |
| TGTATGAAATGTTGCCACTG+CGG | - | chr5_4:1322462-1322481 | Msa0828590:CDS | 40.0% | |
| AATTTCTCACCCATCTCTCA+AGG | - | chr5_4:1322536-1322555 | Msa0828590:CDS | 40.0% | |
| ! | TGCAAGTTGGGAACAAATGA+GGG | + | chr5_4:1322641-1322660 | None:intergenic | 40.0% |
| GCTTAGCTAAAAAACCACTG+GGG | + | chr5_4:1322664-1322683 | None:intergenic | 40.0% | |
| GAGCTTAGCTAAAAAACCAC+TGG | + | chr5_4:1322666-1322685 | None:intergenic | 40.0% | |
| TACTGGTGAAAAAAAGGTCG+AGG | + | chr5_4:1322817-1322836 | None:intergenic | 40.0% | |
| AACGAATCTCCAAACTGCTA+TGG | + | chr5_4:1322952-1322971 | None:intergenic | 40.0% | |
| ATATCATGTGTGGGATGTAC+TGG | - | chr5_4:1323099-1323118 | Msa0828590:CDS | 40.0% | |
| TATTCACGCCTCTCTTTGTA+TGG | - | chr5_4:1323127-1323146 | Msa0828590:CDS | 40.0% | |
| CGTATCTTCCATACAAAGAG+AGG | + | chr5_4:1323138-1323157 | None:intergenic | 40.0% | |
| GTTAAATGATCCAACCATGC+AGG | - | chr5_4:1323234-1323253 | Msa0828590:CDS | 40.0% | |
| TCAAAAGAATCCTGCATGGT+TGG | + | chr5_4:1323247-1323266 | None:intergenic | 40.0% | |
| GGATTCAAAAGAATCCTGCA+TGG | + | chr5_4:1323251-1323270 | None:intergenic | 40.0% | |
| !!! | GTGTTTTTAGGGTTGTCCTT+GGG | + | chr5_4:1323280-1323299 | None:intergenic | 40.0% |
| !!! | TGTGTTTTTAGGGTTGTCCT+TGG | + | chr5_4:1323281-1323300 | None:intergenic | 40.0% |
| TGTTGTTGCATGATCATCCT+TGG | + | chr5_4:1323382-1323401 | None:intergenic | 40.0% | |
| GCAAGTTTCAGATTCTGACT+CGG | - | chr5_4:1323405-1323424 | Msa0828590:CDS | 40.0% | |
| AAGCTCCGATTCATCAGATT+CGG | - | chr5_4:1323441-1323460 | Msa0828590:CDS | 40.0% | |
| CTACCTAAGCTTTCTTTGCT+CGG | - | chr5_4:1323617-1323636 | Msa0828590:CDS | 40.0% | |
| ! | TTGGTTGTTGTTACGTACGG+CGG | + | chr5_4:1317684-1317703 | None:intergenic | 45.0% |
| CAACAACCAAACCCTAGAGA+TGG | - | chr5_4:1317694-1317713 | Msa0828590:three_prime_UTR | 45.0% | |
| ! | TCGTGGTGGTGAAGATTTAG+AGG | - | chr5_4:1317826-1317845 | Msa0828590:CDS | 45.0% |
| ! | GGATAACCGTCGAAGGTATA+AGG | - | chr5_4:1317886-1317905 | Msa0828590:CDS | 45.0% |
| ! | GGATAGGGAAAGAAGGCATA+GGG | - | chr5_4:1317946-1317965 | Msa0828590:CDS | 45.0% |
| ! | AAAGAAGGCATAGGGCTGAT+AGG | - | chr5_4:1317954-1317973 | Msa0828590:CDS | 45.0% |
| ! | AAGAAGGCATAGGGCTGATA+GGG | - | chr5_4:1317955-1317974 | Msa0828590:CDS | 45.0% |
| GGAATTTGGATAGGGAAAGG+AGG | - | chr5_4:1318059-1318078 | Msa0828590:CDS | 45.0% | |
| AGAAGGACAGGAAGAGAGAA+AGG | - | chr5_4:1318116-1318135 | Msa0828590:CDS | 45.0% | |
| GAAGGACAGGAAGAGAGAAA+GGG | - | chr5_4:1318117-1318136 | Msa0828590:CDS | 45.0% | |
| GATGACGATGATAGGAGGAA+TGG | - | chr5_4:1318148-1318167 | Msa0828590:intron | 45.0% | |
| TGACGATGATAGGAGGAATG+GGG | - | chr5_4:1318150-1318169 | Msa0828590:intron | 45.0% | |
| TCGCCATTTATCACACTTGC+CGG | + | chr5_4:1318271-1318290 | None:intergenic | 45.0% | |
| ATCCTCGCTAACTTAAACGG+CGG | + | chr5_4:1318331-1318350 | None:intergenic | 45.0% | |
| CAAGTCAACCTCTGATACTC+CGG | + | chr5_4:1318382-1318401 | None:intergenic | 45.0% | |
| ! | GGAGTATCAGAGGTTGACTT+GGG | - | chr5_4:1318381-1318400 | Msa0828590:intron | 45.0% |
| !! | GGTTGACTTGGGATGCTTTA+AGG | - | chr5_4:1318392-1318411 | Msa0828590:intron | 45.0% |
| GCAAATACATCCGTAAACCC+GGG | + | chr5_4:1318553-1318572 | None:intergenic | 45.0% | |
| ! | TACGGATGTATTTGCTGCGA+TGG | - | chr5_4:1318558-1318577 | Msa0828590:intron | 45.0% |
| ACTTCAACACTGTCATCGGA+AGG | + | chr5_4:1318881-1318900 | None:intergenic | 45.0% | |
| ! | TTCCGATGACAGTGTTGAAG+TGG | - | chr5_4:1318880-1318899 | Msa0828590:intron | 45.0% |
| AGCCACTTCAACACTGTCAT+CGG | + | chr5_4:1318885-1318904 | None:intergenic | 45.0% | |
| AACTCACCATGAAGTCCTCT+CGG | + | chr5_4:1318953-1318972 | None:intergenic | 45.0% | |
| GACTAAGGCATGATGATTGG+TGG | - | chr5_4:1319531-1319550 | Msa0828590:intron | 45.0% | |
| CCCCGAAGTAGAATCAGTTA+AGG | + | chr5_4:1319636-1319655 | None:intergenic | 45.0% | |
| ! | GGTATCTTTGAGCGTTTTCG+TGG | - | chr5_4:1320005-1320024 | Msa0828590:intron | 45.0% |
| TACAGGGTTATCCAGCTGTT+CGG | - | chr5_4:1320420-1320439 | Msa0828590:intron | 45.0% | |
| ATAGATCCTGAGACTTCCCT+TGG | - | chr5_4:1320506-1320525 | Msa0828590:CDS | 45.0% | |
| AATGTACCAAGGGAAGTCTC+AGG | + | chr5_4:1320515-1320534 | None:intergenic | 45.0% | |
| TTCTCCAGATAATTGGGGTC+GGG | + | chr5_4:1320645-1320664 | None:intergenic | 45.0% | |
| CTAATCTTGTCAATCTGCGG+CGG | - | chr5_4:1320814-1320833 | Msa0828590:intron | 45.0% | |
| TCAATGCTTACCTCTTGACC+TGG | + | chr5_4:1320915-1320934 | None:intergenic | 45.0% | |
| TGTACCCAACCTTAAGTGGT+GGG | + | chr5_4:1321667-1321686 | None:intergenic | 45.0% | |
| ATGTACCCAACCTTAAGTGG+TGG | + | chr5_4:1321668-1321687 | None:intergenic | 45.0% | |
| ATAGAGCCACGATCCATCAT+AGG | + | chr5_4:1321712-1321731 | None:intergenic | 45.0% | |
| TCACTCATGCCCAAAACAAC+TGG | - | chr5_4:1321848-1321867 | Msa0828590:intron | 45.0% | |
| CACTCATGCCCAAAACAACT+GGG | - | chr5_4:1321849-1321868 | Msa0828590:intron | 45.0% | |
| ACTCATGCCCAAAACAACTG+GGG | - | chr5_4:1321850-1321869 | Msa0828590:intron | 45.0% | |
| !! | ACTCTTGCCCCAGTTGTTTT+GGG | + | chr5_4:1321860-1321879 | None:intergenic | 45.0% |
| GTCCAAGAGGACATTGTAGA+CGG | - | chr5_4:1322012-1322031 | Msa0828590:intron | 45.0% | |
| TACCGTCTACAATGTCCTCT+TGG | + | chr5_4:1322017-1322036 | None:intergenic | 45.0% | |
| CAAATGGACGAAATGGAGGA+AGG | + | chr5_4:1322224-1322243 | None:intergenic | 45.0% | |
| TGTTTATGGCAGATGATGCC+AGG | - | chr5_4:1322278-1322297 | Msa0828590:intron | 45.0% | |
| ! | GTGGATGAAAGGTACACTTG+GGG | + | chr5_4:1322315-1322334 | None:intergenic | 45.0% |
| ! | GGTGGATGAAAGGTACACTT+GGG | + | chr5_4:1322316-1322335 | None:intergenic | 45.0% |
| ! | TGGTGGATGAAAGGTACACT+TGG | + | chr5_4:1322317-1322336 | None:intergenic | 45.0% |
| !! | AAGCTGGAATGGTGGATGAA+AGG | + | chr5_4:1322326-1322345 | None:intergenic | 45.0% |
| ATTGCCAACTGAAGCTGGAA+TGG | + | chr5_4:1322337-1322356 | None:intergenic | 45.0% | |
| ACTCATTCCAGTGGCATCAA+TGG | + | chr5_4:1322361-1322380 | None:intergenic | 45.0% | |
| AGGATCTCAACTCATTCCAG+TGG | + | chr5_4:1322370-1322389 | None:intergenic | 45.0% | |
| ! | ATTTTGGACTTGTGCCTGCA+GGG | + | chr5_4:1322494-1322513 | None:intergenic | 45.0% |
| !! | TATTTTGGACTTGTGCCTGC+AGG | + | chr5_4:1322495-1322514 | None:intergenic | 45.0% |
| TTGGGAACAAATGAGGGAGT+GGG | + | chr5_4:1322635-1322654 | None:intergenic | 45.0% | |
| ! | GTGCAAGTTGGGAACAAATG+AGG | + | chr5_4:1322642-1322661 | None:intergenic | 45.0% |
| CCTACTTGAATCAGCATGCT+AGG | + | chr5_4:1322712-1322731 | None:intergenic | 45.0% | |
| !! | CCTAGCATGCTGATTCAAGT+AGG | - | chr5_4:1322709-1322728 | Msa0828590:CDS | 45.0% |
| AGGCATGGCCAGAAAAACAT+TGG | + | chr5_4:1322759-1322778 | None:intergenic | 45.0% | |
| GACTTGGATGGAACTAAGCA+AGG | + | chr5_4:1322779-1322798 | None:intergenic | 45.0% | |
| AGGCACTAGTTAGACTTGGA+TGG | + | chr5_4:1322791-1322810 | None:intergenic | 45.0% | |
| TGAAAAAAAGGTCGAGGCTG+AGG | + | chr5_4:1322811-1322830 | None:intergenic | 45.0% | |
| ! | CAGGAATTGTCAGAGCATCT+AGG | - | chr5_4:1323190-1323209 | Msa0828590:CDS | 45.0% |
| AGGGTTGTCCTTGGGAAAAA+TGG | + | chr5_4:1323272-1323291 | None:intergenic | 45.0% | |
| !! | TTCACATCCATTGGTCTTGG+TGG | - | chr5_4:1323319-1323338 | Msa0828590:CDS | 45.0% |
| AGTAAGACCACCAAGACCAA+TGG | + | chr5_4:1323329-1323348 | None:intergenic | 45.0% | |
| AGCTCCGATTCATCAGATTC+GGG | - | chr5_4:1323442-1323461 | Msa0828590:CDS | 45.0% | |
| GGTTCCCGAATCTGATGAAT+CGG | + | chr5_4:1323449-1323468 | None:intergenic | 45.0% | |
| ACTTGACTCTGACTCAGAAC+TGG | + | chr5_4:1323470-1323489 | None:intergenic | 45.0% | |
| CACAGGTTACAAACTCGTCA+TGG | + | chr5_4:1323560-1323579 | None:intergenic | 45.0% | |
| TCACCGAGCAAAGAAAGCTT+AGG | + | chr5_4:1323623-1323642 | None:intergenic | 45.0% | |
| TAGCTACTCATGCACACACT+TGG | - | chr5_4:1323646-1323665 | Msa0828590:five_prime_UTR | 45.0% | |
| GTGTTGTCAATTGTGTTGCC+TGG | - | chr5_4:1323727-1323746 | Msa0828590:five_prime_UTR | 45.0% | |
| !! | CTCTACCCATCTCTAGGGTT+TGG | + | chr5_4:1317703-1317722 | None:intergenic | 50.0% |
| CAAACCCTAGAGATGGGTAG+AGG | - | chr5_4:1317701-1317720 | Msa0828590:three_prime_UTR | 50.0% | |
| TTCGCCTCTACCCATCTCTA+GGG | + | chr5_4:1317708-1317727 | None:intergenic | 50.0% | |
| AGTGAATCGTCCGAGGAAGA+AGG | - | chr5_4:1317731-1317750 | Msa0828590:three_prime_UTR | 50.0% | |
| GTGAATCGTCCGAGGAAGAA+GGG | - | chr5_4:1317732-1317751 | Msa0828590:three_prime_UTR | 50.0% | |
| CTTCACCACCACGATGTTTC+CGG | + | chr5_4:1317820-1317839 | None:intergenic | 50.0% | |
| ! | GGGATAGGGAAAGAAGGCAT+AGG | - | chr5_4:1317945-1317964 | Msa0828590:CDS | 50.0% |
| GCATAGGGCTGATAGGGTTA+GGG | - | chr5_4:1317961-1317980 | Msa0828590:CDS | 50.0% | |
| AGATCGGCGTCGTCGATATA+AGG | - | chr5_4:1318006-1318025 | Msa0828590:CDS | 50.0% | |
| ATCGACGCGATGACGATGAT+AGG | - | chr5_4:1318140-1318159 | Msa0828590:intron | 50.0% | |
| ATAGGAGGAATGGGGAGAGA+AGG | - | chr5_4:1318158-1318177 | Msa0828590:intron | 50.0% | |
| TAGGAGGAATGGGGAGAGAA+GGG | - | chr5_4:1318159-1318178 | Msa0828590:intron | 50.0% | |
| ! | TTCCGCCGTTTAAGTTAGCG+AGG | - | chr5_4:1318326-1318345 | Msa0828590:intron | 50.0% |
| ! | AGAGTAGTCCGGAGTATCAG+AGG | - | chr5_4:1318371-1318390 | Msa0828590:intron | 50.0% |
| ! | CGGAGTATCAGAGGTTGACT+TGG | - | chr5_4:1318380-1318399 | Msa0828590:intron | 50.0% |
| ! | GACAGTGTTGAAGTGGCTGT+TGG | - | chr5_4:1318887-1318906 | Msa0828590:intron | 50.0% |
| AGAATGTGGCTCAATGCTGC+AGG | - | chr5_4:1318919-1318938 | Msa0828590:intron | 50.0% | |
| TGATTCTACTTCGGGGTCTG+AGG | - | chr5_4:1319640-1319659 | Msa0828590:intron | 50.0% | |
| ! | TTGGGCCTTATAACCCCTGT+TGG | + | chr5_4:1319763-1319782 | None:intergenic | 50.0% |
| GATAACCCACGAAGTCTCCT+TGG | - | chr5_4:1320475-1320494 | Msa0828590:CDS | 50.0% | |
| CTCATCCAAGGAGACTTCGT+GGG | + | chr5_4:1320483-1320502 | None:intergenic | 50.0% | |
| CAAACCCGACCCCAATTATC+TGG | - | chr5_4:1320638-1320657 | Msa0828590:CDS | 50.0% | |
| !! | GAAGAAAAGCTTGCTGGGTG+AGG | - | chr5_4:1320686-1320705 | Msa0828590:CDS | 50.0% |
| GGTGAGGAAGAGGAATCAGA+GGG | - | chr5_4:1320702-1320721 | Msa0828590:intron | 50.0% | |
| ! | GCATTTTCCCCCACCACTTA+AGG | - | chr5_4:1321655-1321674 | Msa0828590:intron | 50.0% |
| TTTCCCCCACCACTTAAGGT+TGG | - | chr5_4:1321659-1321678 | Msa0828590:intron | 50.0% | |
| TTCCCCCACCACTTAAGGTT+GGG | - | chr5_4:1321660-1321679 | Msa0828590:intron | 50.0% | |
| TACCCAACCTTAAGTGGTGG+GGG | + | chr5_4:1321665-1321684 | None:intergenic | 50.0% | |
| GTACCCAACCTTAAGTGGTG+GGG | + | chr5_4:1321666-1321685 | None:intergenic | 50.0% | |
| ! | GACTCTTGCCCCAGTTGTTT+TGG | + | chr5_4:1321861-1321880 | None:intergenic | 50.0% |
| CTCTTGGACTGAATGCTAGG+TGG | + | chr5_4:1322001-1322020 | None:intergenic | 50.0% | |
| CACCTAGCATTCAGTCCAAG+AGG | - | chr5_4:1321999-1322018 | Msa0828590:intron | 50.0% | |
| GTCCTCTTGGACTGAATGCT+AGG | + | chr5_4:1322004-1322023 | None:intergenic | 50.0% | |
| TGGTGTCCCATGATGAGCAT+AGG | + | chr5_4:1322084-1322103 | None:intergenic | 50.0% | |
| GACGAAATGGAGGAAGGCTT+TGG | + | chr5_4:1322218-1322237 | None:intergenic | 50.0% | |
| ! | GATGAAAGGTACACTTGGGG+CGG | + | chr5_4:1322312-1322331 | None:intergenic | 50.0% |
| TCCACCATTCCAGCTTCAGT+TGG | - | chr5_4:1322330-1322349 | Msa0828590:intron | 50.0% | |
| ATGGCATTGCCAACTGAAGC+TGG | + | chr5_4:1322342-1322361 | None:intergenic | 50.0% | |
| !! | AGGGAGTGGGTTTTCTTCGA+CGG | + | chr5_4:1322622-1322641 | None:intergenic | 50.0% |
| GTTGGGAACAAATGAGGGAG+TGG | + | chr5_4:1322636-1322655 | None:intergenic | 50.0% | |
| AAACCACTGGGGTGCAAGTT+GGG | + | chr5_4:1322653-1322672 | None:intergenic | 50.0% | |
| AAAACCACTGGGGTGCAAGT+TGG | + | chr5_4:1322654-1322673 | None:intergenic | 50.0% | |
| GCAAGACAGCAGGCAAACAA+GGG | + | chr5_4:1322688-1322707 | None:intergenic | 50.0% | |
| TGCAAGACAGCAGGCAAACA+AGG | + | chr5_4:1322689-1322708 | None:intergenic | 50.0% | |
| GGATGGAACTAAGCAAGGCA+TGG | + | chr5_4:1322774-1322793 | None:intergenic | 50.0% | |
| ! | GCTGAGGCACTAGTTAGACT+TGG | + | chr5_4:1322795-1322814 | None:intergenic | 50.0% |
| TGCGGCTAGATCAATGACAG+AGG | + | chr5_4:1322911-1322930 | None:intergenic | 50.0% | |
| CAGTGTGGCAGATTGCATTG+CGG | + | chr5_4:1322929-1322948 | None:intergenic | 50.0% | |
| TCCAAACTGCTATGGCAGTG+TGG | + | chr5_4:1322944-1322963 | None:intergenic | 50.0% | |
| ! | TGTCAGAGCATCTAGGCATC+CGG | - | chr5_4:1323197-1323216 | Msa0828590:CDS | 50.0% |
| GCATCCGGTTGCTAAATGAG+AGG | - | chr5_4:1323212-1323231 | Msa0828590:CDS | 50.0% | |
| GTTACGTACGGCGGTTGAAG+AGG | + | chr5_4:1317675-1317694 | None:intergenic | 55.0% | |
| CTTCGCCTCTACCCATCTCT+AGG | + | chr5_4:1317709-1317728 | None:intergenic | 55.0% | |
| CTAGAGATGGGTAGAGGCGA+AGG | - | chr5_4:1317707-1317726 | Msa0828590:three_prime_UTR | 55.0% | |
| CGAAGGAAGTGAATCGTCCG+AGG | - | chr5_4:1317724-1317743 | Msa0828590:three_prime_UTR | 55.0% | |
| GACGAACTGCCCTTCTTCCT+CGG | + | chr5_4:1317744-1317763 | None:intergenic | 55.0% | |
| GATCTTCGCCGGAAACATCG+TGG | - | chr5_4:1317809-1317828 | Msa0828590:exon | 55.0% | |
| GGGATAGGGATAACCGTCGA+AGG | - | chr5_4:1317879-1317898 | Msa0828590:CDS | 55.0% | |
| GGCATAGGGCTGATAGGGTT+AGG | - | chr5_4:1317960-1317979 | Msa0828590:CDS | 55.0% | |
| GACGCGATGACGATGATAGG+AGG | - | chr5_4:1318143-1318162 | Msa0828590:intron | 55.0% | |
| AAGTCACAGATGGCGTCACC+CGG | - | chr5_4:1318532-1318551 | Msa0828590:intron | 55.0% | |
| TATCGCGCTAGAGCTGCTCA+CGG | - | chr5_4:1318841-1318860 | Msa0828590:intron | 55.0% | |
| CTCTCACCGAGAGGACTTCA+TGG | - | chr5_4:1318944-1318963 | Msa0828590:intron | 55.0% | |
| CACTAGCAGAGGAGGAGGTA+AGG | + | chr5_4:1319153-1319172 | None:intergenic | 55.0% | |
| ACCTCCTCCTCTGCTAGTGA+TGG | - | chr5_4:1319154-1319173 | Msa0828590:intron | 55.0% | |
| CCTCCTCCTCTGCTAGTGAT+GGG | - | chr5_4:1319155-1319174 | Msa0828590:intron | 55.0% | |
| CTCCTCCTCTGCTAGTGATG+GGG | - | chr5_4:1319156-1319175 | Msa0828590:intron | 55.0% | |
| ACTCTCCCCATCACTAGCAG+AGG | + | chr5_4:1319164-1319183 | None:intergenic | 55.0% | |
| ! | TCTGCTAGTGATGGGGAGAG+TGG | - | chr5_4:1319163-1319182 | Msa0828590:intron | 55.0% |
| TCAAGTTCAGGCCGAACAGC+TGG | + | chr5_4:1320434-1320453 | None:intergenic | 55.0% | |
| TGCTCCACGAGGTCAAGTTC+AGG | + | chr5_4:1320446-1320465 | None:intergenic | 55.0% | |
| TGAACTTGACCTCGTGGAGC+AGG | - | chr5_4:1320445-1320464 | Msa0828590:CDS | 55.0% | |
| TCTGATCTTCCTGCTCCACG+AGG | + | chr5_4:1320457-1320476 | None:intergenic | 55.0% | |
| CCTCATCCAAGGAGACTTCG+TGG | + | chr5_4:1320484-1320503 | None:intergenic | 55.0% | |
| CCACGAAGTCTCCTTGGATG+AGG | - | chr5_4:1320481-1320500 | Msa0828590:CDS | 55.0% | |
| !! | AAGCTTGCTGGGTGAGGAAG+AGG | - | chr5_4:1320692-1320711 | Msa0828590:CDS | 55.0% |
| GGGTGAGGAAGAGGAATCAG+AGG | - | chr5_4:1320701-1320720 | Msa0828590:intron | 55.0% | |
| GGAAGAGGAATCAGAGGGAG+AGG | - | chr5_4:1320707-1320726 | Msa0828590:intron | 55.0% | |
| GAGGAATCAGAGGGAGAGGA+AGG | - | chr5_4:1320711-1320730 | Msa0828590:intron | 55.0% | |
| ATCAGAGGGAGAGGAAGGCT+CGG | - | chr5_4:1320716-1320735 | Msa0828590:intron | 55.0% | |
| GGAAGGCTCGGATGCTGAAT+CGG | - | chr5_4:1320728-1320747 | Msa0828590:intron | 55.0% | |
| CCTCTTGACCTGGCTCAAGA+TGG | + | chr5_4:1320905-1320924 | None:intergenic | 55.0% | |
| CCATCTTGAGCCAGGTCAAG+AGG | - | chr5_4:1320902-1320921 | Msa0828590:CDS | 55.0% | |
| GCTTCTCGAATGTTGCAGCC+AGG | - | chr5_4:1321044-1321063 | Msa0828590:intron | 55.0% | |
| ! | TCGGGACTTTTGCTCTGCCT+TGG | - | chr5_4:1321232-1321251 | Msa0828590:intron | 55.0% |
| AAGTCGTGTCGTCCTCAGTC+AGG | + | chr5_4:1321278-1321297 | None:intergenic | 55.0% | |
| !! | CTTGGGGCGGATTTTTGACC+TGG | + | chr5_4:1322299-1322318 | None:intergenic | 55.0% |
| GCCAACTGAAGCTGGAATGG+TGG | + | chr5_4:1322334-1322353 | None:intergenic | 55.0% | |
| GGCAATGCCATTGATGCCAC+TGG | - | chr5_4:1322351-1322370 | Msa0828590:intron | 55.0% | |
| !! | GGGAGTGGGTTTTCTTCGAC+GGG | + | chr5_4:1322621-1322640 | None:intergenic | 55.0% |
| CATGCTAGGTGCAAGACAGC+AGG | + | chr5_4:1322698-1322717 | None:intergenic | 55.0% | |
| GCCACACTGCCATAGCAGTT+TGG | - | chr5_4:1322940-1322959 | Msa0828590:CDS | 55.0% | |
| ACAGGACACGTGCATCATCC+AGG | + | chr5_4:1323748-1323767 | None:intergenic | 55.0% | |
| AGGCTGAGCACGACTGTGTG+CGG | + | chr5_4:1317655-1317674 | None:intergenic | 60.0% | |
| GATCCTCCACGTCAGCTCCA+CGG | + | chr5_4:1317793-1317812 | None:intergenic | 60.0% | |
| CTGACGTGGAGGATCTTCGC+CGG | - | chr5_4:1317798-1317817 | Msa0828590:exon | 60.0% | |
| CTTCGCCGGAAACATCGTGG+TGG | - | chr5_4:1317812-1317831 | Msa0828590:exon | 60.0% | |
| AGGAAGGAAGTGGGAGAGCG+AGG | - | chr5_4:1318236-1318255 | Msa0828590:intron | 60.0% | |
| AGGAAGTGGGAGAGCGAGGA+CGG | - | chr5_4:1318240-1318259 | Msa0828590:intron | 60.0% | |
| GAGAGCGAGGACGGTGATAC+CGG | - | chr5_4:1318249-1318268 | Msa0828590:intron | 60.0% | |
| AGTCACAGATGGCGTCACCC+GGG | - | chr5_4:1318533-1318552 | Msa0828590:intron | 60.0% | |
| GATGGCGTCACCCGGGTTTA+CGG | - | chr5_4:1318540-1318559 | Msa0828590:intron | 60.0% | |
| CTGCAGGATCTCTCACCGAG+AGG | - | chr5_4:1318935-1318954 | Msa0828590:intron | 60.0% | |
| CCCATCACTAGCAGAGGAGG+AGG | + | chr5_4:1319158-1319177 | None:intergenic | 60.0% | |
| CTCCCCATCACTAGCAGAGG+AGG | + | chr5_4:1319161-1319180 | None:intergenic | 60.0% | |
| TCGGCCTGAACTTGACCTCG+TGG | - | chr5_4:1320439-1320458 | Msa0828590:CDS | 60.0% | |
| GTTCCCAACTTGCACCCCAG+TGG | - | chr5_4:1322647-1322666 | Msa0828590:intron | 60.0% | |
| CTGAGCACGACTGTGTGCGG+CGG | + | chr5_4:1317652-1317671 | None:intergenic | 65.0% | |
| GAAGAGAAGCGAGACCGCCG+TGG | - | chr5_4:1317773-1317792 | Msa0828590:three_prime_UTR | 65.0% | |
| AGCACGACTGTGTGCGGCGG+CGG | + | chr5_4:1317649-1317668 | None:intergenic | 70.0% | |
| AGACCGCCGTGGAGCTGACG+TGG | - | chr5_4:1317784-1317803 | Msa0828590:three_prime_UTR | 70.0% | |
| CCTCCACGTCAGCTCCACGG+CGG | + | chr5_4:1317790-1317809 | None:intergenic | 70.0% | |
| CTGCAGGGTAGCAGCCGCAG+TGG | + | chr5_4:1322479-1322498 | None:intergenic | 70.0% | |
| CACTGCGGCTGCTACCCTGC+AGG | - | chr5_4:1322477-1322496 | Msa0828590:CDS | 70.0% | |
| CCGCCGTGGAGCTGACGTGG+AGG | - | chr5_4:1317787-1317806 | Msa0828590:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 1317550 | 1323799 | 1317550 | ID=Msa0828590;Name=Msa0828590 |
| chr5_4 | mRNA | 1317550 | 1323799 | 1317550 | ID=Msa0828590-mRNA-1;Parent=Msa0828590;Name=Msa0828590-mRNA-1;_AED=0.07;_eAED=0.07;_QI=163|0.83|0.85|1|1|1|7|265|749 |
| chr5_4 | exon | 1317550 | 1318156 | 1317550 | ID=Msa0828590-mRNA-1:exon:338;Parent=Msa0828590-mRNA-1 |
| chr5_4 | exon | 1320017 | 1320322 | 1320017 | ID=Msa0828590-mRNA-1:exon:337;Parent=Msa0828590-mRNA-1 |
| chr5_4 | exon | 1320426 | 1320718 | 1320426 | ID=Msa0828590-mRNA-1:exon:336;Parent=Msa0828590-mRNA-1 |
| chr5_4 | exon | 1320822 | 1320924 | 1320822 | ID=Msa0828590-mRNA-1:exon:335;Parent=Msa0828590-mRNA-1 |
| chr5_4 | exon | 1321291 | 1321343 | 1321291 | ID=Msa0828590-mRNA-1:exon:334;Parent=Msa0828590-mRNA-1 |
| chr5_4 | exon | 1322384 | 1322573 | 1322384 | ID=Msa0828590-mRNA-1:exon:333;Parent=Msa0828590-mRNA-1 |
| chr5_4 | exon | 1322674 | 1323799 | 1322674 | ID=Msa0828590-mRNA-1:exon:332;Parent=Msa0828590-mRNA-1 |
| chr5_4 | five_prime_UTR | 1323637 | 1323799 | 1323637 | ID=Msa0828590-mRNA-1:five_prime_utr;Parent=Msa0828590-mRNA-1 |
| chr5_4 | CDS | 1322674 | 1323636 | 1322674 | ID=Msa0828590-mRNA-1:cds;Parent=Msa0828590-mRNA-1 |
| chr5_4 | CDS | 1322384 | 1322573 | 1322384 | ID=Msa0828590-mRNA-1:cds;Parent=Msa0828590-mRNA-1 |
| chr5_4 | CDS | 1321291 | 1321343 | 1321291 | ID=Msa0828590-mRNA-1:cds;Parent=Msa0828590-mRNA-1 |
| chr5_4 | CDS | 1320822 | 1320924 | 1320822 | ID=Msa0828590-mRNA-1:cds;Parent=Msa0828590-mRNA-1 |
| chr5_4 | CDS | 1320426 | 1320718 | 1320426 | ID=Msa0828590-mRNA-1:cds;Parent=Msa0828590-mRNA-1 |
| chr5_4 | CDS | 1320017 | 1320322 | 1320017 | ID=Msa0828590-mRNA-1:cds;Parent=Msa0828590-mRNA-1 |
| chr5_4 | CDS | 1317815 | 1318156 | 1317815 | ID=Msa0828590-mRNA-1:cds;Parent=Msa0828590-mRNA-1 |
| chr5_4 | three_prime_UTR | 1317550 | 1317814 | 1317550 | ID=Msa0828590-mRNA-1:three_prime_utr;Parent=Msa0828590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
