Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0518970 | XP_003602730.1 | 91.228 | 513 | 30 | 3 | 5 | 503 | 293 | 804 | 0.0 | 948 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0518970 | sp|Q8VZG7|TSN1_ARATH | 69.482 | 521 | 139 | 7 | 1 | 503 | 287 | 805 | 0.0 | 708 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0518970 | G7J2R6 | 91.228 | 513 | 30 | 3 | 5 | 503 | 293 | 804 | 0.0 | 948 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0062170 | Msa0518970 | 0.817255 | 3.625673e-52 | -8.615850e-47 |
| Msa0234320 | Msa0518970 | 0.804055 | 2.596143e-49 | -8.615850e-47 |
| Msa0379280 | Msa0518970 | 0.816922 | 4.307755e-52 | -8.615850e-47 |
| Msa0354680 | Msa0518970 | 0.830535 | 2.780351e-55 | -8.615850e-47 |
| Msa0518930 | Msa0518970 | 0.860611 | 1.830194e-63 | -8.615850e-47 |
| Msa0518940 | Msa0518970 | 0.931793 | 2.232385e-94 | -8.615850e-47 |
| Msa0518950 | Msa0518970 | 0.917302 | 6.263840e-86 | -8.615850e-47 |
| Msa0518970 | Msa0518980 | 0.857005 | 2.190925e-62 | -8.615850e-47 |
| Msa0518970 | Msa1407940 | 0.831643 | 1.485689e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0518970 | MtrunA17_Chr3g0131421 | 91.228 | 513 | 30 | 3 | 5 | 503 | 293 | 804 | 0.0 | 948 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0518970 | AT5G07350.2 | 69.482 | 521 | 139 | 7 | 1 | 503 | 287 | 805 | 0.0 | 709 |
| Msa0518970 | AT5G07350.1 | 69.482 | 521 | 139 | 7 | 1 | 503 | 287 | 805 | 0.0 | 708 |
| Msa0518970 | AT5G61780.1 | 69.767 | 516 | 130 | 8 | 5 | 503 | 295 | 801 | 0.0 | 706 |
Find 129 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAAGTCTTTGGCTTTCT+TGG | 0.159486 | 3_4:-70870825 | None:intergenic |
| GCTGCAGCACGTGCCATTTC+TGG | 0.184079 | 3_4:+70870636 | Msa0518970:CDS |
| AGAAAACCAGGTTAAGAATT+TGG | 0.184322 | 3_4:+70869916 | Msa0518970:CDS |
| AAGTATTAGGTGTCCGAAAA+TGG | 0.185013 | 3_4:+70870178 | Msa0518970:CDS |
| GATTCCAGAGTAATGGATTT+TGG | 0.202686 | 3_4:+70870432 | Msa0518970:CDS |
| TTACCTTTCCAGTAAAATTT+TGG | 0.220966 | 3_4:-70869983 | None:intergenic |
| TGAACTTATCCACACCTTCT+AGG | 0.236811 | 3_4:-70868927 | None:intergenic |
| GCAATACTGCAAGTTTCTTT+AGG | 0.246025 | 3_4:-70870926 | None:intergenic |
| AGGACTATGTCACCCTTCTT+AGG | 0.289036 | 3_4:-70871708 | None:intergenic |
| GAACATTCTTGGGATCCTTA+TGG | 0.295382 | 3_4:+70871159 | Msa0518970:CDS |
| CAGGAAAGGCAAGAAGTCTT+TGG | 0.324696 | 3_4:-70870834 | None:intergenic |
| AACATTCTTGGGATCCTTAT+GGG | 0.327704 | 3_4:+70871160 | Msa0518970:CDS |
| GGGTTAACCTTTCAAGTATT+AGG | 0.329701 | 3_4:+70870165 | Msa0518970:CDS |
| GCAATTGCTTCATCAGAATA+TGG | 0.336309 | 3_4:-70870989 | None:intergenic |
| AATGTTGCTGAATTGATAAT+TGG | 0.341069 | 3_4:+70870540 | Msa0518970:CDS |
| TTGATAATTGGACGTGGCTT+TGG | 0.344884 | 3_4:+70870552 | Msa0518970:CDS |
| ATGTACAAATGGAATATTCT+AGG | 0.365595 | 3_4:+70870364 | Msa0518970:CDS |
| GCAAAACTTCAAACCTCCTT+TGG | 0.366862 | 3_4:+70871227 | Msa0518970:CDS |
| CAAGAACTCCTTTGCTTCAC+GGG | 0.375410 | 3_4:-70870237 | None:intergenic |
| GCTAGCTTCTTTGAACTTGA+AGG | 0.385526 | 3_4:+70871659 | Msa0518970:CDS |
| GATAAGTTCAGCAATTTGAT+TGG | 0.387009 | 3_4:+70868940 | Msa0518970:CDS |
| GCTTTCAACATTTGCACCAC+TGG | 0.390231 | 3_4:-70871432 | None:intergenic |
| CAGCTTTCCCAGAGGACAAT+AGG | 0.391344 | 3_4:-70870464 | None:intergenic |
| GATCCCTTTCCTTCCAGAAA+TGG | 0.396452 | 3_4:-70870649 | None:intergenic |
| TTCTCTGGTGTCAGATGTCC+TGG | 0.396588 | 3_4:+70870956 | Msa0518970:CDS |
| TGACAGAACAGGAACATTCT+TGG | 0.399594 | 3_4:+70871148 | Msa0518970:CDS |
| TGGTGAATCAGCAAAGGATT+TGG | 0.411988 | 3_4:+70868981 | Msa0518970:CDS |
| TAGCAGGAACAGCGGGTGAC+GGG | 0.418763 | 3_4:-70870500 | None:intergenic |
| GTTCCTGCTAGTCAGCAAAC+TGG | 0.419562 | 3_4:+70870513 | Msa0518970:CDS |
| ATGCTGATTCATCTTGGTAC+CGG | 0.420935 | 3_4:+70871742 | Msa0518970:CDS |
| TCCTTTGCTGATTCACCATC+GGG | 0.422335 | 3_4:-70868976 | None:intergenic |
| GCTTCACGGGCATAGGGAGC+TGG | 0.427681 | 3_4:-70870224 | None:intergenic |
| AAACCTCCTTTGGCAGTGAC+AGG | 0.431314 | 3_4:+70871237 | Msa0518970:CDS |
| TGCTCTAAGACGTGAAGATC+AGG | 0.438375 | 3_4:-70871263 | None:intergenic |
| GACAGAACAGGAACATTCTT+GGG | 0.442564 | 3_4:+70871149 | Msa0518970:CDS |
| TCTTGAGAACACGCCTCATC+GGG | 0.449684 | 3_4:+70870255 | Msa0518970:CDS |
| ATGGAATATTCTAGGAAAGT+TGG | 0.452719 | 3_4:+70870372 | Msa0518970:CDS |
| GGTAACTGTTACAGAAGTCT+TGG | 0.462157 | 3_4:+70871575 | Msa0518970:intron |
| TCAAGAACTCCTTTGCTTCA+CGG | 0.463651 | 3_4:-70870238 | None:intergenic |
| ATAAGTTCAGCAATTTGATT+GGG | 0.464289 | 3_4:+70868941 | Msa0518970:CDS |
| CTGGAGGATCCTTGGCAGAA+TGG | 0.470945 | 3_4:-70870671 | None:intergenic |
| ATGCATCACTGGAGGATCCT+TGG | 0.472624 | 3_4:-70870679 | None:intergenic |
| AACCCAGTTTGCTGACTAGC+AGG | 0.472981 | 3_4:-70870516 | None:intergenic |
| AGTATTAGGTGTCCGAAAAT+GGG | 0.473185 | 3_4:+70870179 | Msa0518970:CDS |
| ATCTGGGAAAATTATGTTCA+AGG | 0.484541 | 3_4:+70871398 | Msa0518970:CDS |
| TCCTTTGCTTCACGGGCATA+GGG | 0.488852 | 3_4:-70870230 | None:intergenic |
| TATGGGAGTCAAGAGCCAAC+GGG | 0.490754 | 3_4:+70871177 | Msa0518970:CDS |
| CTTTCAACATTTGCACCACT+GGG | 0.493153 | 3_4:-70871431 | None:intergenic |
| TTGAAGGAAGCTCCTGTGAT+TGG | 0.494590 | 3_4:+70871675 | Msa0518970:CDS |
| TAGGAATCAACAATTTGAAA+CGG | 0.497313 | 3_4:-70870907 | None:intergenic |
| CTCCTTTGCTTCACGGGCAT+AGG | 0.498760 | 3_4:-70870231 | None:intergenic |
| GTAGAAATAGTTGACAGAAC+AGG | 0.499233 | 3_4:+70871137 | Msa0518970:CDS |
| GCCTTCGAATTTGAAGTTGG+TGG | 0.502548 | 3_4:-70869951 | None:intergenic |
| GAACTCTTCTGCTTCAATGC+AGG | 0.502705 | 3_4:-70870853 | None:intergenic |
| TTCTTGAGAACACGCCTCAT+CGG | 0.504580 | 3_4:+70870254 | Msa0518970:CDS |
| TGCTGATTCATCTTGGTACC+GGG | 0.505453 | 3_4:+70871743 | Msa0518970:CDS |
| GTTTGTCCAAATTCTTAACC+TGG | 0.506774 | 3_4:-70869922 | None:intergenic |
| ATCCTTTGCTGATTCACCAT+CGG | 0.507089 | 3_4:-70868977 | None:intergenic |
| TTCCTGCTAGTCAGCAAACT+GGG | 0.507686 | 3_4:+70870514 | Msa0518970:CDS |
| AGAAGCTAGCTGATTCTGAA+TGG | 0.513410 | 3_4:-70871646 | None:intergenic |
| AAGTCAGTTATATGCATCAC+TGG | 0.516591 | 3_4:-70870690 | None:intergenic |
| TGCTGACTAGCAGGAACAGC+GGG | 0.516772 | 3_4:-70870507 | None:intergenic |
| CAAACAGCAAGAAGTACTTA+AGG | 0.517991 | 3_4:+70871454 | Msa0518970:CDS |
| TATTGGAACTTACCATTGCC+CGG | 0.518709 | 3_4:-70871761 | None:intergenic |
| GTAACTGTTACAGAAGTCTT+GGG | 0.519081 | 3_4:+70871576 | Msa0518970:CDS |
| TGATCCAAAATCCATTACTC+TGG | 0.520074 | 3_4:-70870436 | None:intergenic |
| AGGAAAGTTGGTCCTGTGGA+TGG | 0.520974 | 3_4:+70870384 | Msa0518970:CDS |
| TCTGGGAAAATTATGTTCAA+GGG | 0.521252 | 3_4:+70871399 | Msa0518970:CDS |
| TAGTCCACAGGCCGAGAGGC+GGG | 0.528620 | 3_4:+70870145 | Msa0518970:CDS |
| CTAGCAGGAACAGCGGGTGA+CGG | 0.531824 | 3_4:-70870501 | None:intergenic |
| TTAACCCGCCTCTCGGCCTG+TGG | 0.531846 | 3_4:-70870149 | None:intergenic |
| GGATGGATCTGTTGTTCCAC+CGG | 0.536476 | 3_4:+70870401 | Msa0518970:CDS |
| TTCATCTTGGTACCGGGCAA+TGG | 0.536616 | 3_4:+70871749 | Msa0518970:CDS |
| AGCTGCTGATTCCAGAGTAA+TGG | 0.538583 | 3_4:+70870425 | Msa0518970:CDS |
| TGAAAGGTTAACCCGCCTCT+CGG | 0.542326 | 3_4:-70870156 | None:intergenic |
| TCGGACACCTAATACTTGAA+AGG | 0.551552 | 3_4:-70870172 | None:intergenic |
| ATGAAGCAATTGCGTTAATG+AGG | 0.554316 | 3_4:+70870999 | Msa0518970:CDS |
| GATAATGCAGAGAGATGTTG+AGG | 0.555552 | 3_4:+70871027 | Msa0518970:CDS |
| TCCCTATGCCCGTGAAGCAA+AGG | 0.558108 | 3_4:+70870229 | Msa0518970:CDS |
| CAGGTTCGGATTGTCCTAGA+AGG | 0.558167 | 3_4:+70868913 | Msa0518970:CDS |
| GTTGGCTCTTGACTCCCATA+AGG | 0.558459 | 3_4:-70871174 | None:intergenic |
| GCTGATGATTCTATTCCATA+CGG | 0.560398 | 3_4:+70870122 | Msa0518970:CDS |
| GCTGAAGGCTGCAGAGCTTG+AGG | 0.560640 | 3_4:+70869890 | Msa0518970:CDS |
| TTCGTACTTGGCGCCCGATG+AGG | 0.561268 | 3_4:-70870268 | None:intergenic |
| TCGGCCTGTGGACTACCGTA+TGG | 0.561719 | 3_4:-70870137 | None:intergenic |
| CTTCTGCTTCAATGCAGGAA+AGG | 0.563682 | 3_4:-70870848 | None:intergenic |
| GTGCCATTTCTGGAAGGAAA+GGG | 0.566530 | 3_4:+70870646 | Msa0518970:CDS |
| ACTCTGGAATCAGCAGCTCC+CGG | 0.567557 | 3_4:-70870420 | None:intergenic |
| CGTGCCATTTCTGGAAGGAA+AGG | 0.572657 | 3_4:+70870645 | Msa0518970:CDS |
| AGGAATCCTGTCACTGCCAA+AGG | 0.573089 | 3_4:-70871243 | None:intergenic |
| CAGGTGGTTGAAGTTGTGAG+TGG | 0.576649 | 3_4:+70870083 | Msa0518970:intron |
| GCAGTTCTACTACTCGAAGC+TGG | 0.583274 | 3_4:+70871200 | Msa0518970:CDS |
| ATTGCCTTCGAATTTGAAGT+TGG | 0.585166 | 3_4:-70869954 | None:intergenic |
| TTCTAGGAAAGTTGGTCCTG+TGG | 0.586863 | 3_4:+70870380 | Msa0518970:CDS |
| TATTCCATACGGTAGTCCAC+AGG | 0.591693 | 3_4:+70870133 | Msa0518970:CDS |
| AGCTTGAGGCTAAGAAAACC+AGG | 0.592978 | 3_4:+70869904 | Msa0518970:CDS |
| GTTACAGAAGTCTTGGGAGG+TGG | 0.594413 | 3_4:+70871582 | Msa0518970:CDS |
| TGCAAACATGATGGAAGATG+AGG | 0.596761 | 3_4:+70869857 | Msa0518970:CDS |
| CAATTGCGTTAATGAGGCGA+AGG | 0.599014 | 3_4:+70871005 | Msa0518970:CDS |
| GCATATAACTGACTTGATCA+CGG | 0.600630 | 3_4:+70870698 | Msa0518970:CDS |
| AGCAGGAACAGCGGGTGACG+GGG | 0.601160 | 3_4:-70870499 | None:intergenic |
| TTATGGGAGTCAAGAGCCAA+CGG | 0.604337 | 3_4:+70871176 | Msa0518970:CDS |
| CTGGGAAAATTATGTTCAAG+GGG | 0.607394 | 3_4:+70871400 | Msa0518970:CDS |
| TCGGATTGTCCTAGAAGGTG+TGG | 0.608560 | 3_4:+70868918 | Msa0518970:CDS |
| ACCACCAACTTCAAATTCGA+AGG | 0.610449 | 3_4:+70869950 | Msa0518970:CDS |
| GAGTAGTAGAACTGCCCCGT+TGG | 0.612369 | 3_4:-70871192 | None:intergenic |
| GAATATGGCTCTTCATGACC+AGG | 0.615614 | 3_4:-70870974 | None:intergenic |
| TGAATGGAGTGCAAACATGA+TGG | 0.616810 | 3_4:+70869848 | Msa0518970:CDS |
| GTAGTCCACAGGCCGAGAGG+CGG | 0.618117 | 3_4:+70870144 | Msa0518970:CDS |
| AATCCTGTCACTGCCAAAGG+AGG | 0.620481 | 3_4:-70871240 | None:intergenic |
| GGGTCAGTGTATTATCCCGA+TGG | 0.623221 | 3_4:+70868961 | Msa0518970:CDS |
| GAAAGGGATCCATTCTGCCA+AGG | 0.625507 | 3_4:+70870662 | Msa0518970:CDS |
| TCCCGATGGTGAATCAGCAA+AGG | 0.628290 | 3_4:+70868975 | Msa0518970:CDS |
| CAAGGGGAGGTTGTACCCAG+TGG | 0.630982 | 3_4:+70871416 | Msa0518970:CDS |
| GGAAAATTATGTTCAAGGGG+AGG | 0.631402 | 3_4:+70871403 | Msa0518970:CDS |
| CAGCACGTGCCATTTCTGGA+AGG | 0.634391 | 3_4:+70870640 | Msa0518970:CDS |
| GGAACAACAGATCCATCCAC+AGG | 0.643890 | 3_4:-70870396 | None:intergenic |
| AGCTAGCTGATTCTGAATGG+AGG | 0.650190 | 3_4:-70871643 | None:intergenic |
| TGAGGCAAAGAAGAAGCTGA+AGG | 0.650961 | 3_4:+70869875 | Msa0518970:CDS |
| GCTGAATTGATAATTGGACG+TGG | 0.668071 | 3_4:+70870546 | Msa0518970:CDS |
| GATGGATCTGTTGTTCCACC+GGG | 0.670950 | 3_4:+70870402 | Msa0518970:CDS |
| CTGGAATCAGCAGCTCCCGG+TGG | 0.672231 | 3_4:-70870417 | None:intergenic |
| AATCAGCATGAAAATAACAC+AGG | 0.672950 | 3_4:-70871728 | None:intergenic |
| ACGGTAGTCCACAGGCCGAG+AGG | 0.680585 | 3_4:+70870141 | Msa0518970:CDS |
| TCAGTTATATGCATCACTGG+AGG | 0.687302 | 3_4:-70870687 | None:intergenic |
| TTGCTGACTAGCAGGAACAG+CGG | 0.688736 | 3_4:-70870508 | None:intergenic |
| ATCGCTGTCAGCTTTCCCAG+AGG | 0.716546 | 3_4:-70870472 | None:intergenic |
| ACTGTTACAGAAGTCTTGGG+AGG | 0.720898 | 3_4:+70871579 | Msa0518970:CDS |
| ATGGGAGTCAAGAGCCAACG+GGG | 0.733485 | 3_4:+70871178 | Msa0518970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACAAATAATAAACTTAATA+AGG | - | chr3_4:70872517-70872536 | None:intergenic | 10.0% |
| !!! | ATAGATAGTTTATTTTTTTT+TGG | + | chr3_4:70872594-70872613 | Msa0518970:intron | 10.0% |
| !! | GTAACAAAAAAAAATCATAT+TGG | - | chr3_4:70871781-70871800 | None:intergenic | 15.0% |
| !! | ATTAAAATCAAACATTTGTA+AGG | + | chr3_4:70872246-70872265 | Msa0518970:intron | 15.0% |
| !!! | ATATATATTAATACCCATTT+TGG | - | chr3_4:70872423-70872442 | None:intergenic | 15.0% |
| !! | CTAAATAAATCGTGTTAATA+TGG | - | chr3_4:70869050-70869069 | None:intergenic | 20.0% |
| !!! | TGTTTGTACATAATTTTAAG+TGG | + | chr3_4:70869176-70869195 | Msa0518970:intron | 20.0% |
| !! | TTATTGGTCGTTATATATAT+GGG | - | chr3_4:70869238-70869257 | None:intergenic | 20.0% |
| !! | TATTCAATGTATCTAAAAAG+TGG | - | chr3_4:70869360-70869379 | None:intergenic | 20.0% |
| !! | AATCAAATTGATTAAAGACA+TGG | - | chr3_4:70869797-70869816 | None:intergenic | 20.0% |
| !!! | ATTTGATTTTTCCATCAAAT+AGG | + | chr3_4:70869809-70869828 | Msa0518970:intron | 20.0% |
| !!! | TTTGATTTTTCCATCAAATA+GGG | + | chr3_4:70869810-70869829 | Msa0518970:intron | 20.0% |
| !!! | GTTAATTTCTTCAATTTTTC+AGG | + | chr3_4:70870064-70870083 | Msa0518970:intron | 20.0% |
| !!! | GTTTGCAAAATTTTAATTAC+TGG | + | chr3_4:70870720-70870739 | Msa0518970:intron | 20.0% |
| !! | TGATTATGTCAAATATAGTT+GGG | - | chr3_4:70871336-70871355 | None:intergenic | 20.0% |
| !!! | TTTTCTTTAGAATAATAGCA+GGG | - | chr3_4:70871367-70871386 | None:intergenic | 20.0% |
| !!! | ATTTTCTTTAGAATAATAGC+AGG | - | chr3_4:70871368-70871387 | None:intergenic | 20.0% |
| !! | TAAAAAATCAAGAACAAGAA+GGG | - | chr3_4:70871963-70871982 | None:intergenic | 20.0% |
| !! | ATAAAAAATCAAGAACAAGA+AGG | - | chr3_4:70871964-70871983 | None:intergenic | 20.0% |
| !!! | TTGTTCTTGATTTTTTATCT+AGG | + | chr3_4:70871966-70871985 | Msa0518970:intron | 20.0% |
| !!! | TATCCTGTTTATGAATTTTT+TGG | + | chr3_4:70872049-70872068 | Msa0518970:intron | 20.0% |
| !! | TATCCAAAAAATTCATAAAC+AGG | - | chr3_4:70872055-70872074 | None:intergenic | 20.0% |
| ! | ATAAGTTCAGCAATTTGATT+GGG | + | chr3_4:70868941-70868960 | Msa0518970:CDS | 25.0% |
| ! | AAAATGATCCAAAATTGCTT+CGG | - | chr3_4:70869154-70869173 | None:intergenic | 25.0% |
| !!! | TAATTTTAAGTGGTCTAAGA+TGG | + | chr3_4:70869186-70869205 | Msa0518970:intron | 25.0% |
| ! | CTTATTGGTCGTTATATATA+TGG | - | chr3_4:70869239-70869258 | None:intergenic | 25.0% |
| !! | ATTTTGCTTATAATAGTGAC+CGG | - | chr3_4:70869275-70869294 | None:intergenic | 25.0% |
| ! | TTAAAAACATATATTCCCTC+CGG | - | chr3_4:70869406-70869425 | None:intergenic | 25.0% |
| ! | ATAGATATTGCCTAATGATA+CGG | - | chr3_4:70869663-70869682 | None:intergenic | 25.0% |
| ! | AACAAACTATTAAGTGACTT+TGG | - | chr3_4:70869753-70869772 | None:intergenic | 25.0% |
| !! | GTTTTGCTAAATATGTTGAA+TGG | + | chr3_4:70869832-70869851 | Msa0518970:CDS | 25.0% |
| !! | ATTCATGACCAAAATTTTAC+TGG | + | chr3_4:70869975-70869994 | Msa0518970:CDS | 25.0% |
| !! | TTACCTTTCCAGTAAAATTT+TGG | - | chr3_4:70869986-70870005 | None:intergenic | 25.0% |
| !!! | CTCATTTTTTTTATGCCAAA+TGG | + | chr3_4:70870019-70870038 | Msa0518970:intron | 25.0% |
| !!! | AATTTCTTCAATTTTTCAGG+TGG | + | chr3_4:70870067-70870086 | Msa0518970:intron | 25.0% |
| !!! | ACTGATTACTTCTATTTTTC+AGG | + | chr3_4:70870338-70870357 | Msa0518970:intron | 25.0% |
| ! | ATGTACAAATGGAATATTCT+AGG | + | chr3_4:70870364-70870383 | Msa0518970:CDS | 25.0% |
| !! | AATGTTGCTGAATTGATAAT+TGG | + | chr3_4:70870540-70870559 | Msa0518970:CDS | 25.0% |
| !! | TCCTTTTCTTTCATATTGTT+AGG | + | chr3_4:70870796-70870815 | Msa0518970:intron | 25.0% |
| ! | TAGGAATCAACAATTTGAAA+CGG | - | chr3_4:70870910-70870929 | None:intergenic | 25.0% |
| !! | CATATAATTTTTGCAGATTG+AGG | + | chr3_4:70871115-70871134 | Msa0518970:intron | 25.0% |
| ! | CTGATTATGTCAAATATAGT+TGG | - | chr3_4:70871337-70871356 | None:intergenic | 25.0% |
| !! | AAATTTTATGTCCAAACTGT+TGG | + | chr3_4:70871606-70871625 | Msa0518970:CDS | 25.0% |
| ! | CTGTGGCATTAAATTAAATA+GGG | + | chr3_4:70871840-70871859 | Msa0518970:intron | 25.0% |
| ! | GACAAAGATATGAAAGAAAT+AGG | - | chr3_4:70871910-70871929 | None:intergenic | 25.0% |
| !! | TTTCATATCTTTGTCTTTTC+TGG | + | chr3_4:70871915-70871934 | Msa0518970:intron | 25.0% |
| !!! | AGGTTGATATTCAATCAATA+TGG | + | chr3_4:70872006-70872025 | Msa0518970:intron | 25.0% |
| ! | GAATGAGAATTGATTATGTT+TGG | + | chr3_4:70872316-70872335 | Msa0518970:intron | 25.0% |
| GATAAGTTCAGCAATTTGAT+TGG | + | chr3_4:70868940-70868959 | Msa0518970:CDS | 30.0% | |
| TAGTCAAGATCAAATCTTGT+TGG | + | chr3_4:70869067-70869086 | Msa0518970:intron | 30.0% | |
| AATAAGATATATACTCCCTC+CGG | + | chr3_4:70869253-70869272 | Msa0518970:intron | 30.0% | |
| ! | GTTTTGCTTATAATAGTGAC+CGG | + | chr3_4:70869384-70869403 | Msa0518970:intron | 30.0% |
| !! | CTTTTTCACAACCATTTAGT+TGG | - | chr3_4:70869466-70869485 | None:intergenic | 30.0% |
| CAACTAAATGGTTGTGAAAA+AGG | + | chr3_4:70869464-70869483 | Msa0518970:intron | 30.0% | |
| ATGATACGGCAATAAAACTA+AGG | - | chr3_4:70869649-70869668 | None:intergenic | 30.0% | |
| !!! | AGTTTTATTGCCGTATCATT+AGG | + | chr3_4:70869650-70869669 | Msa0518970:intron | 30.0% |
| ATTAGGCAATATCTATTGCA+TGG | + | chr3_4:70869667-70869686 | Msa0518970:intron | 30.0% | |
| !! | AGTCACTTAATAGTTTGTTG+TGG | + | chr3_4:70869754-70869773 | Msa0518970:intron | 30.0% |
| TTTAGCAAAACCCTATTTGA+TGG | - | chr3_4:70869823-70869842 | None:intergenic | 30.0% | |
| AGAAAACCAGGTTAAGAATT+TGG | + | chr3_4:70869916-70869935 | Msa0518970:CDS | 30.0% | |
| ! | TGACCAAAATTTTACTGGAA+AGG | + | chr3_4:70869980-70869999 | Msa0518970:CDS | 30.0% |
| TCACTGAAGAAATAACCATT+TGG | - | chr3_4:70870037-70870056 | None:intergenic | 30.0% | |
| TCGGCAATGATATTAAAAGA+AGG | - | chr3_4:70870307-70870326 | None:intergenic | 30.0% | |
| !!! | TTTTCAGGTGAATGTACAAA+TGG | + | chr3_4:70870353-70870372 | Msa0518970:intron | 30.0% |
| ! | ATGGAATATTCTAGGAAAGT+TGG | + | chr3_4:70870372-70870391 | Msa0518970:CDS | 30.0% |
| GCCTAACAATATGAAAGAAA+AGG | - | chr3_4:70870800-70870819 | None:intergenic | 30.0% | |
| TAAAAAGCTGAAGGTAAGAA+TGG | + | chr3_4:70871307-70871326 | Msa0518970:intron | 30.0% | |
| AAAAAGCTGAAGGTAAGAAT+GGG | + | chr3_4:70871308-70871327 | Msa0518970:intron | 30.0% | |
| !! | AGAAAATTGTTTTGCAGATC+TGG | + | chr3_4:70871381-70871400 | Msa0518970:intron | 30.0% |
| !! | GAAAATTGTTTTGCAGATCT+GGG | + | chr3_4:70871382-70871401 | Msa0518970:intron | 30.0% |
| ATCTGGGAAAATTATGTTCA+AGG | + | chr3_4:70871398-70871417 | Msa0518970:CDS | 30.0% | |
| TCTGGGAAAATTATGTTCAA+GGG | + | chr3_4:70871399-70871418 | Msa0518970:CDS | 30.0% | |
| TAACAGTTACCTATGAATGA+AGG | - | chr3_4:70871566-70871585 | None:intergenic | 30.0% | |
| !! | TGGTGTTTTTAATCCTAAGA+AGG | + | chr3_4:70871695-70871714 | Msa0518970:CDS | 30.0% |
| !! | GGTGTTTTTAATCCTAAGAA+GGG | + | chr3_4:70871696-70871715 | Msa0518970:CDS | 30.0% |
| AATCAGCATGAAAATAACAC+AGG | - | chr3_4:70871731-70871750 | None:intergenic | 30.0% | |
| !!! | ATTTTCATGCTGATTCATCT+TGG | + | chr3_4:70871736-70871755 | Msa0518970:CDS | 30.0% |
| ! | CCTATTTAATTTAATGCCAC+AGG | - | chr3_4:70871842-70871861 | None:intergenic | 30.0% |
| CCTGTGGCATTAAATTAAAT+AGG | + | chr3_4:70871839-70871858 | Msa0518970:intron | 30.0% | |
| !! | TCAGGTCAATCATATTTTTG+TGG | - | chr3_4:70872146-70872165 | None:intergenic | 30.0% |
| TGAACGTGTAATTACCAAAA+TGG | + | chr3_4:70872406-70872425 | Msa0518970:intron | 30.0% | |
| GAACGTGTAATTACCAAAAT+GGG | + | chr3_4:70872407-70872426 | Msa0518970:intron | 30.0% | |
| !! | ATCTGACTTGTTTACTACCA+CGG | + | chr3_4:70869090-70869109 | Msa0518970:intron | 35.0% |
| ! | GGAGGGAGTATATATCTTAT+TGG | - | chr3_4:70869254-70869273 | None:intergenic | 35.0% |
| ! | ACAACCATTTAGTTGGTACA+TGG | - | chr3_4:70869459-70869478 | None:intergenic | 35.0% |
| !!! | CATTTTACTTGCTATGATGC+TGG | + | chr3_4:70869490-70869509 | Msa0518970:intron | 35.0% |
| TCTATTGCATGGCATTTAGT+TGG | + | chr3_4:70869678-70869697 | Msa0518970:intron | 35.0% | |
| GTTTGTCCAAATTCTTAACC+TGG | - | chr3_4:70869925-70869944 | None:intergenic | 35.0% | |
| ! | ATTGCCTTCGAATTTGAAGT+TGG | - | chr3_4:70869957-70869976 | None:intergenic | 35.0% |
| GCTGATGATTCTATTCCATA+CGG | + | chr3_4:70870122-70870141 | Msa0518970:CDS | 35.0% | |
| ! | GGGTTAACCTTTCAAGTATT+AGG | + | chr3_4:70870165-70870184 | Msa0518970:CDS | 35.0% |
| AAGTATTAGGTGTCCGAAAA+TGG | + | chr3_4:70870178-70870197 | Msa0518970:CDS | 35.0% | |
| AGTATTAGGTGTCCGAAAAT+GGG | + | chr3_4:70870179-70870198 | Msa0518970:CDS | 35.0% | |
| CCACAATATATCTTCGTACT+TGG | - | chr3_4:70870283-70870302 | None:intergenic | 35.0% | |
| CCAAGTACGAAGATATATTG+TGG | + | chr3_4:70870280-70870299 | Msa0518970:intron | 35.0% | |
| TAATCAGTTGTAGCTTAGGT+CGG | - | chr3_4:70870326-70870345 | None:intergenic | 35.0% | |
| GAAGTAATCAGTTGTAGCTT+AGG | - | chr3_4:70870330-70870349 | None:intergenic | 35.0% | |
| !!! | GATTCCAGAGTAATGGATTT+TGG | + | chr3_4:70870432-70870451 | Msa0518970:CDS | 35.0% |
| TGATCCAAAATCCATTACTC+TGG | - | chr3_4:70870439-70870458 | None:intergenic | 35.0% | |
| AAGTCAGTTATATGCATCAC+TGG | - | chr3_4:70870693-70870712 | None:intergenic | 35.0% | |
| !! | GCATATAACTGACTTGATCA+CGG | + | chr3_4:70870698-70870717 | Msa0518970:CDS | 35.0% |
| GCAATACTGCAAGTTTCTTT+AGG | - | chr3_4:70870929-70870948 | None:intergenic | 35.0% | |
| !! | AGTATTGCTTTTGCATTCTC+TGG | + | chr3_4:70870941-70870960 | Msa0518970:CDS | 35.0% |
| GCAATTGCTTCATCAGAATA+TGG | - | chr3_4:70870992-70871011 | None:intergenic | 35.0% | |
| ATGAAGCAATTGCGTTAATG+AGG | + | chr3_4:70870999-70871018 | Msa0518970:CDS | 35.0% | |
| AATAAACAACACTCAGACTC+AGG | - | chr3_4:70871082-70871101 | None:intergenic | 35.0% | |
| GTAGAAATAGTTGACAGAAC+AGG | + | chr3_4:70871137-70871156 | Msa0518970:CDS | 35.0% | |
| AACATTCTTGGGATCCTTAT+GGG | + | chr3_4:70871160-70871179 | Msa0518970:CDS | 35.0% | |
| TGCTAAGAGTAAAAAGCTGA+AGG | + | chr3_4:70871298-70871317 | Msa0518970:CDS | 35.0% | |
| AAAAGCTGAAGGTAAGAATG+GGG | + | chr3_4:70871309-70871328 | Msa0518970:intron | 35.0% | |
| CTGGGAAAATTATGTTCAAG+GGG | + | chr3_4:70871400-70871419 | Msa0518970:CDS | 35.0% | |
| !! | CAAACAGCAAGAAGTACTTA+AGG | + | chr3_4:70871454-70871473 | Msa0518970:CDS | 35.0% |
| GTAACTGTTACAGAAGTCTT+GGG | + | chr3_4:70871576-70871595 | Msa0518970:CDS | 35.0% | |
| ! | TCTTTTGATCTCCAACAGTT+TGG | - | chr3_4:70871620-70871639 | None:intergenic | 35.0% |
| GGATTAAAAACACCAATCAC+AGG | - | chr3_4:70871690-70871709 | None:intergenic | 35.0% | |
| AATCAAGAACAAGAAGGGTA+GGG | - | chr3_4:70871958-70871977 | None:intergenic | 35.0% | |
| AAATCAAGAACAAGAAGGGT+AGG | - | chr3_4:70871959-70871978 | None:intergenic | 35.0% | |
| AGGTATCTTGATGAGTGTTT+AGG | + | chr3_4:70871986-70872005 | Msa0518970:intron | 35.0% | |
| CTAGAATGTGCAGAATAATC+TGG | - | chr3_4:70872107-70872126 | None:intergenic | 35.0% | |
| TCATTCTCAAACTCAATCTC+AGG | - | chr3_4:70872164-70872183 | None:intergenic | 35.0% | |
| !! | GAGTTCGAGAGAATTGATTT+TGG | + | chr3_4:70872280-70872299 | Msa0518970:intron | 35.0% |
| !! | TCTCATGAGTTGATGTTGTT+TGG | + | chr3_4:70872360-70872379 | Msa0518970:intron | 35.0% |
| TGAACTTATCCACACCTTCT+AGG | - | chr3_4:70868930-70868949 | None:intergenic | 40.0% | |
| !! | ATCCTTTGCTGATTCACCAT+CGG | - | chr3_4:70868980-70868999 | None:intergenic | 40.0% |
| TGGTGAATCAGCAAAGGATT+TGG | + | chr3_4:70868981-70869000 | Msa0518970:CDS | 40.0% | |
| ATGCTACAGTGTAAAAACCG+TGG | - | chr3_4:70869110-70869129 | None:intergenic | 40.0% | |
| ! | TGTTGAGACCGAAGCAATTT+TGG | + | chr3_4:70869143-70869162 | Msa0518970:intron | 40.0% |
| ! | AAGTGGTCTAAGATGGTTGT+TGG | + | chr3_4:70869193-70869212 | Msa0518970:intron | 40.0% |
| TGCTTATAATAGTGACCGGA+GGG | - | chr3_4:70869388-70869407 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr3_4:70869387-70869406 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr3_4:70869387-70869406 | Msa0518970:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr3_4:70869388-70869407 | Msa0518970:intron | 40.0% | |
| ! | TTAGTTGGTACATGGTAGGT+AGG | - | chr3_4:70869451-70869470 | None:intergenic | 40.0% |
| ! | CCATTTAGTTGGTACATGGT+AGG | - | chr3_4:70869455-70869474 | None:intergenic | 40.0% |
| CCTACCATGTACCAACTAAA+TGG | + | chr3_4:70869452-70869471 | Msa0518970:intron | 40.0% | |
| TTCGAATACCCTATCGATGA+GGG | - | chr3_4:70869726-70869745 | None:intergenic | 40.0% | |
| ATTCGAATACCCTATCGATG+AGG | - | chr3_4:70869727-70869746 | None:intergenic | 40.0% | |
| !! | AATAGTTTGTTGTGGCAGTC+TGG | + | chr3_4:70869762-70869781 | Msa0518970:intron | 40.0% |
| TGAATGGAGTGCAAACATGA+TGG | + | chr3_4:70869848-70869867 | Msa0518970:CDS | 40.0% | |
| ! | TGCAAACATGATGGAAGATG+AGG | + | chr3_4:70869857-70869876 | Msa0518970:CDS | 40.0% |
| ACCACCAACTTCAAATTCGA+AGG | + | chr3_4:70869950-70869969 | Msa0518970:CDS | 40.0% | |
| TCGGACACCTAATACTTGAA+AGG | - | chr3_4:70870175-70870194 | None:intergenic | 40.0% | |
| TCAAGAACTCCTTTGCTTCA+CGG | - | chr3_4:70870241-70870260 | None:intergenic | 40.0% | |
| ! | TCAGTTTTCCTATTGTCCTC+TGG | + | chr3_4:70870456-70870475 | Msa0518970:CDS | 40.0% |
| ! | CAGTTTTCCTATTGTCCTCT+GGG | + | chr3_4:70870457-70870476 | Msa0518970:CDS | 40.0% |
| ! | GCTGAATTGATAATTGGACG+TGG | + | chr3_4:70870546-70870565 | Msa0518970:CDS | 40.0% |
| ! | TTGATAATTGGACGTGGCTT+TGG | + | chr3_4:70870552-70870571 | Msa0518970:CDS | 40.0% |
| TCAGTTATATGCATCACTGG+AGG | - | chr3_4:70870690-70870709 | None:intergenic | 40.0% | |
| !! | CAAGAAGTCTTTGGCTTTCT+TGG | - | chr3_4:70870828-70870847 | None:intergenic | 40.0% |
| AAGACATATTCCACTACAGC+TGG | - | chr3_4:70870878-70870897 | None:intergenic | 40.0% | |
| ! | GTAGTGGAATATGTCTTCAG+TGG | + | chr3_4:70870881-70870900 | Msa0518970:intron | 40.0% |
| GATAATGCAGAGAGATGTTG+AGG | + | chr3_4:70871027-70871046 | Msa0518970:CDS | 40.0% | |
| TGACAGAACAGGAACATTCT+TGG | + | chr3_4:70871148-70871167 | Msa0518970:CDS | 40.0% | |
| GACAGAACAGGAACATTCTT+GGG | + | chr3_4:70871149-70871168 | Msa0518970:CDS | 40.0% | |
| GAACATTCTTGGGATCCTTA+TGG | + | chr3_4:70871159-70871178 | Msa0518970:CDS | 40.0% | |
| GCAAAACTTCAAACCTCCTT+TGG | + | chr3_4:70871227-70871246 | Msa0518970:CDS | 40.0% | |
| GGAAAATTATGTTCAAGGGG+AGG | + | chr3_4:70871403-70871422 | Msa0518970:CDS | 40.0% | |
| CTTTCAACATTTGCACCACT+GGG | - | chr3_4:70871434-70871453 | None:intergenic | 40.0% | |
| !! | AAGAAGTACTTAAGGTGCGT+TGG | + | chr3_4:70871462-70871481 | Msa0518970:intron | 40.0% |
| ! | TGCCCCTTGTTTGTGTTATT+GGG | + | chr3_4:70871520-70871539 | Msa0518970:intron | 40.0% |
| TCCCCCAATAACACAAACAA+GGG | - | chr3_4:70871526-70871545 | None:intergenic | 40.0% | |
| TTCCCCCAATAACACAAACA+AGG | - | chr3_4:70871527-70871546 | None:intergenic | 40.0% | |
| ATCCACTGTCCTTCATTCAT+AGG | + | chr3_4:70871554-70871573 | Msa0518970:intron | 40.0% | |
| TACCTATGAATGAAGGACAG+TGG | - | chr3_4:70871559-70871578 | None:intergenic | 40.0% | |
| GGTAACTGTTACAGAAGTCT+TGG | + | chr3_4:70871575-70871594 | Msa0518970:intron | 40.0% | |
| ! | AGAAGCTAGCTGATTCTGAA+TGG | - | chr3_4:70871649-70871668 | None:intergenic | 40.0% |
| ! | GCTAGCTTCTTTGAACTTGA+AGG | + | chr3_4:70871659-70871678 | Msa0518970:CDS | 40.0% |
| !! | ATGCTGATTCATCTTGGTAC+CGG | + | chr3_4:70871742-70871761 | Msa0518970:CDS | 40.0% |
| TATTGGAACTTACCATTGCC+CGG | - | chr3_4:70871764-70871783 | None:intergenic | 40.0% | |
| TGCAATGCCTAAACTGGTAA+GGG | - | chr3_4:70871817-70871836 | None:intergenic | 40.0% | |
| TTGCAATGCCTAAACTGGTA+AGG | - | chr3_4:70871818-70871837 | None:intergenic | 40.0% | |
| ! | TTTGTCTTTTCTGGATCCCT+TGG | + | chr3_4:70871924-70871943 | Msa0518970:intron | 40.0% |
| ATCAAGAACAAGAAGGGTAG+GGG | - | chr3_4:70871957-70871976 | None:intergenic | 40.0% | |
| GAATGAGTGTTAAGTCGTGT+AGG | + | chr3_4:70872178-70872197 | Msa0518970:intron | 40.0% | |
| !! | TCCTTTGCTGATTCACCATC+GGG | - | chr3_4:70868979-70868998 | None:intergenic | 45.0% |
| CTAAGATGGTTGTTGGTACG+TGG | + | chr3_4:70869200-70869219 | Msa0518970:intron | 45.0% | |
| GGGAGAAACATGGGATATCA+AGG | - | chr3_4:70869705-70869724 | None:intergenic | 45.0% | |
| ATCGATGAGGGGAGAAACAT+GGG | - | chr3_4:70869714-70869733 | None:intergenic | 45.0% | |
| TATCGATGAGGGGAGAAACA+TGG | - | chr3_4:70869715-70869734 | None:intergenic | 45.0% | |
| ATGTTTCTCCCCTCATCGAT+AGG | + | chr3_4:70869714-70869733 | Msa0518970:intron | 45.0% | |
| TGTTTCTCCCCTCATCGATA+GGG | + | chr3_4:70869715-70869734 | Msa0518970:intron | 45.0% | |
| TCGAATACCCTATCGATGAG+GGG | - | chr3_4:70869725-70869744 | None:intergenic | 45.0% | |
| TGAGGCAAAGAAGAAGCTGA+AGG | + | chr3_4:70869875-70869894 | Msa0518970:CDS | 45.0% | |
| AGCTTGAGGCTAAGAAAACC+AGG | + | chr3_4:70869904-70869923 | Msa0518970:CDS | 45.0% | |
| ! | GCCTTCGAATTTGAAGTTGG+TGG | - | chr3_4:70869954-70869973 | None:intergenic | 45.0% |
| TATTCCATACGGTAGTCCAC+AGG | + | chr3_4:70870133-70870152 | Msa0518970:CDS | 45.0% | |
| CAAGAACTCCTTTGCTTCAC+GGG | - | chr3_4:70870240-70870259 | None:intergenic | 45.0% | |
| TTCTTGAGAACACGCCTCAT+CGG | + | chr3_4:70870254-70870273 | Msa0518970:CDS | 45.0% | |
| ! | TTCTAGGAAAGTTGGTCCTG+TGG | + | chr3_4:70870380-70870399 | Msa0518970:CDS | 45.0% |
| !! | AGCTGCTGATTCCAGAGTAA+TGG | + | chr3_4:70870425-70870444 | Msa0518970:CDS | 45.0% |
| TTCCTGCTAGTCAGCAAACT+GGG | + | chr3_4:70870514-70870533 | Msa0518970:CDS | 45.0% | |
| !! | GTGCCATTTCTGGAAGGAAA+GGG | + | chr3_4:70870646-70870665 | Msa0518970:CDS | 45.0% |
| GATCCCTTTCCTTCCAGAAA+TGG | - | chr3_4:70870652-70870671 | None:intergenic | 45.0% | |
| CAGGAAAGGCAAGAAGTCTT+TGG | - | chr3_4:70870837-70870856 | None:intergenic | 45.0% | |
| CTTCTGCTTCAATGCAGGAA+AGG | - | chr3_4:70870851-70870870 | None:intergenic | 45.0% | |
| GAACTCTTCTGCTTCAATGC+AGG | - | chr3_4:70870856-70870875 | None:intergenic | 45.0% | |
| GAATATGGCTCTTCATGACC+AGG | - | chr3_4:70870977-70870996 | None:intergenic | 45.0% | |
| CAATTGCGTTAATGAGGCGA+AGG | + | chr3_4:70871005-70871024 | Msa0518970:CDS | 45.0% | |
| CAGGAATCTTGAGCTCAGAA+AGG | - | chr3_4:70871063-70871082 | None:intergenic | 45.0% | |
| TTATGGGAGTCAAGAGCCAA+CGG | + | chr3_4:70871176-70871195 | Msa0518970:CDS | 45.0% | |
| !! | TGCTCTAAGACGTGAAGATC+AGG | - | chr3_4:70871266-70871285 | None:intergenic | 45.0% |
| GCTTTCAACATTTGCACCAC+TGG | - | chr3_4:70871435-70871454 | None:intergenic | 45.0% | |
| CTTAAGGTGCGTTGGAATGT+AGG | + | chr3_4:70871470-70871489 | Msa0518970:intron | 45.0% | |
| ! | GTGCCCCTTGTTTGTGTTAT+TGG | + | chr3_4:70871519-70871538 | Msa0518970:intron | 45.0% |
| ! | GCCCCTTGTTTGTGTTATTG+GGG | + | chr3_4:70871521-70871540 | Msa0518970:intron | 45.0% |
| CCCCCAATAACACAAACAAG+GGG | - | chr3_4:70871525-70871544 | None:intergenic | 45.0% | |
| ! | CCCCTTGTTTGTGTTATTGG+GGG | + | chr3_4:70871522-70871541 | Msa0518970:intron | 45.0% |
| ACTGTTACAGAAGTCTTGGG+AGG | + | chr3_4:70871579-70871598 | Msa0518970:CDS | 45.0% | |
| ! | AGCTAGCTGATTCTGAATGG+AGG | - | chr3_4:70871646-70871665 | None:intergenic | 45.0% |
| TTGAAGGAAGCTCCTGTGAT+TGG | + | chr3_4:70871675-70871694 | Msa0518970:CDS | 45.0% | |
| AGGACTATGTCACCCTTCTT+AGG | - | chr3_4:70871711-70871730 | None:intergenic | 45.0% | |
| !! | TGCTGATTCATCTTGGTACC+GGG | + | chr3_4:70871743-70871762 | Msa0518970:CDS | 45.0% |
| GCAATGCCTAAACTGGTAAG+GGG | - | chr3_4:70871816-70871835 | None:intergenic | 45.0% | |
| CAGGATTGCAATGCCTAAAC+TGG | - | chr3_4:70871823-70871842 | None:intergenic | 45.0% | |
| ! | GTTTAGGCATTGCAATCCTG+TGG | + | chr3_4:70871823-70871842 | Msa0518970:intron | 45.0% |
| CAGGTTCGGATTGTCCTAGA+AGG | + | chr3_4:70868913-70868932 | Msa0518970:CDS | 50.0% | |
| TCGGATTGTCCTAGAAGGTG+TGG | + | chr3_4:70868918-70868937 | Msa0518970:CDS | 50.0% | |
| GGGTCAGTGTATTATCCCGA+TGG | + | chr3_4:70868961-70868980 | Msa0518970:CDS | 50.0% | |
| TCCCGATGGTGAATCAGCAA+AGG | + | chr3_4:70868975-70868994 | Msa0518970:CDS | 50.0% | |
| CAGGTGGTTGAAGTTGTGAG+TGG | + | chr3_4:70870083-70870102 | Msa0518970:intron | 50.0% | |
| TGAAAGGTTAACCCGCCTCT+CGG | - | chr3_4:70870159-70870178 | None:intergenic | 50.0% | |
| ! | CGACGAGGATTGCCCATTTT+CGG | - | chr3_4:70870194-70870213 | None:intergenic | 50.0% |
| !!! | GCTGGTTTTTCATCTCGACG+AGG | - | chr3_4:70870209-70870228 | None:intergenic | 50.0% |
| TCCTTTGCTTCACGGGCATA+GGG | - | chr3_4:70870233-70870252 | None:intergenic | 50.0% | |
| TCTTGAGAACACGCCTCATC+GGG | + | chr3_4:70870255-70870274 | Msa0518970:CDS | 50.0% | |
| ! | AGGAAAGTTGGTCCTGTGGA+TGG | + | chr3_4:70870384-70870403 | Msa0518970:CDS | 50.0% |
| GGAACAACAGATCCATCCAC+AGG | - | chr3_4:70870399-70870418 | None:intergenic | 50.0% | |
| GGATGGATCTGTTGTTCCAC+CGG | + | chr3_4:70870401-70870420 | Msa0518970:CDS | 50.0% | |
| GATGGATCTGTTGTTCCACC+GGG | + | chr3_4:70870402-70870421 | Msa0518970:CDS | 50.0% | |
| CAGCTTTCCCAGAGGACAAT+AGG | - | chr3_4:70870467-70870486 | None:intergenic | 50.0% | |
| ! | TTGCTGACTAGCAGGAACAG+CGG | - | chr3_4:70870511-70870530 | None:intergenic | 50.0% |
| GTTCCTGCTAGTCAGCAAAC+TGG | + | chr3_4:70870513-70870532 | Msa0518970:CDS | 50.0% | |
| !! | AACCCAGTTTGCTGACTAGC+AGG | - | chr3_4:70870519-70870538 | None:intergenic | 50.0% |
| !! | CGTGCCATTTCTGGAAGGAA+AGG | + | chr3_4:70870645-70870664 | Msa0518970:CDS | 50.0% |
| GAAAGGGATCCATTCTGCCA+AGG | + | chr3_4:70870662-70870681 | Msa0518970:CDS | 50.0% | |
| ATGCATCACTGGAGGATCCT+TGG | - | chr3_4:70870682-70870701 | None:intergenic | 50.0% | |
| !! | GTCTTTGGCTTTCTTGGCTG+AGG | - | chr3_4:70870822-70870841 | None:intergenic | 50.0% |
| CAGAAGAGTTCCAGCTGTAG+TGG | + | chr3_4:70870865-70870884 | Msa0518970:intron | 50.0% | |
| ! | TTCTCTGGTGTCAGATGTCC+TGG | + | chr3_4:70870956-70870975 | Msa0518970:CDS | 50.0% |
| ! | GTTGGCTCTTGACTCCCATA+AGG | - | chr3_4:70871177-70871196 | None:intergenic | 50.0% |
| TATGGGAGTCAAGAGCCAAC+GGG | + | chr3_4:70871177-70871196 | Msa0518970:CDS | 50.0% | |
| GCAGTTCTACTACTCGAAGC+TGG | + | chr3_4:70871200-70871219 | Msa0518970:CDS | 50.0% | |
| AAACCTCCTTTGGCAGTGAC+AGG | + | chr3_4:70871237-70871256 | Msa0518970:CDS | 50.0% | |
| AATCCTGTCACTGCCAAAGG+AGG | - | chr3_4:70871243-70871262 | None:intergenic | 50.0% | |
| AGGAATCCTGTCACTGCCAA+AGG | - | chr3_4:70871246-70871265 | None:intergenic | 50.0% | |
| GTTACAGAAGTCTTGGGAGG+TGG | + | chr3_4:70871582-70871601 | Msa0518970:CDS | 50.0% | |
| ! | TTCATCTTGGTACCGGGCAA+TGG | + | chr3_4:70871749-70871768 | Msa0518970:CDS | 50.0% |
| CCTAAACTGGTAAGGGGAGA+AGG | - | chr3_4:70871810-70871829 | None:intergenic | 50.0% | |
| CCTTCTCCCCTTACCAGTTT+AGG | + | chr3_4:70871807-70871826 | Msa0518970:intron | 50.0% | |
| TCCCTATGCCCGTGAAGCAA+AGG | + | chr3_4:70870229-70870248 | Msa0518970:CDS | 55.0% | |
| CTCCTTTGCTTCACGGGCAT+AGG | - | chr3_4:70870234-70870253 | None:intergenic | 55.0% | |
| !! | ACTCTGGAATCAGCAGCTCC+CGG | - | chr3_4:70870423-70870442 | None:intergenic | 55.0% |
| ATCGCTGTCAGCTTTCCCAG+AGG | - | chr3_4:70870475-70870494 | None:intergenic | 55.0% | |
| ! | TGCTGACTAGCAGGAACAGC+GGG | - | chr3_4:70870510-70870529 | None:intergenic | 55.0% |
| !! | CAGCACGTGCCATTTCTGGA+AGG | + | chr3_4:70870640-70870659 | Msa0518970:CDS | 55.0% |
| CTGGAGGATCCTTGGCAGAA+TGG | - | chr3_4:70870674-70870693 | None:intergenic | 55.0% | |
| ATGGGAGTCAAGAGCCAACG+GGG | + | chr3_4:70871178-70871197 | Msa0518970:CDS | 55.0% | |
| GAGTAGTAGAACTGCCCCGT+TGG | - | chr3_4:70871195-70871214 | None:intergenic | 55.0% | |
| GGGTAGGGGAAAACAGCCAA+GGG | - | chr3_4:70871943-70871962 | None:intergenic | 55.0% | |
| AGGGTAGGGGAAAACAGCCA+AGG | - | chr3_4:70871944-70871963 | None:intergenic | 55.0% | |
| GCTGAAGGCTGCAGAGCTTG+AGG | + | chr3_4:70869890-70869909 | Msa0518970:CDS | 60.0% | |
| ! | TCGGCCTGTGGACTACCGTA+TGG | - | chr3_4:70870140-70870159 | None:intergenic | 60.0% |
| TTCGTACTTGGCGCCCGATG+AGG | - | chr3_4:70870271-70870290 | None:intergenic | 60.0% | |
| TAGCAGGAACAGCGGGTGAC+GGG | - | chr3_4:70870503-70870522 | None:intergenic | 60.0% | |
| CTAGCAGGAACAGCGGGTGA+CGG | - | chr3_4:70870504-70870523 | None:intergenic | 60.0% | |
| !! | GCTGCAGCACGTGCCATTTC+TGG | + | chr3_4:70870636-70870655 | Msa0518970:CDS | 60.0% |
| CAAGGGGAGGTTGTACCCAG+TGG | + | chr3_4:70871416-70871435 | Msa0518970:CDS | 60.0% | |
| ACGGTAGTCCACAGGCCGAG+AGG | + | chr3_4:70870141-70870160 | Msa0518970:CDS | 65.0% | |
| GTAGTCCACAGGCCGAGAGG+CGG | + | chr3_4:70870144-70870163 | Msa0518970:CDS | 65.0% | |
| TAGTCCACAGGCCGAGAGGC+GGG | + | chr3_4:70870145-70870164 | Msa0518970:CDS | 65.0% | |
| TTAACCCGCCTCTCGGCCTG+TGG | - | chr3_4:70870152-70870171 | None:intergenic | 65.0% | |
| GCTTCACGGGCATAGGGAGC+TGG | - | chr3_4:70870227-70870246 | None:intergenic | 65.0% | |
| CTGGAATCAGCAGCTCCCGG+TGG | - | chr3_4:70870420-70870439 | None:intergenic | 65.0% | |
| AGCAGGAACAGCGGGTGACG+GGG | - | chr3_4:70870502-70870521 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 70868904 | 70872633 | 70868904 | ID=Msa0518970;Name=Msa0518970 |
| chr3_4 | mRNA | 70868904 | 70872633 | 70868904 | ID=Msa0518970-mRNA-1;Parent=Msa0518970;Name=Msa0518970-mRNA-1;_AED=0.37;_eAED=0.39;_QI=0|0|0|0.90|0.7|0.63|11|0|503 |
| chr3_4 | exon | 70868904 | 70869023 | 70868904 | ID=Msa0518970-mRNA-1:exon:19365;Parent=Msa0518970-mRNA-1 |
| chr3_4 | exon | 70869831 | 70870001 | 70869831 | ID=Msa0518970-mRNA-1:exon:19366;Parent=Msa0518970-mRNA-1 |
| chr3_4 | exon | 70870086 | 70870283 | 70870086 | ID=Msa0518970-mRNA-1:exon:19367;Parent=Msa0518970-mRNA-1 |
| chr3_4 | exon | 70870360 | 70870591 | 70870360 | ID=Msa0518970-mRNA-1:exon:19368;Parent=Msa0518970-mRNA-1 |
| chr3_4 | exon | 70870604 | 70870719 | 70870604 | ID=Msa0518970-mRNA-1:exon:19369;Parent=Msa0518970-mRNA-1 |
| chr3_4 | exon | 70870825 | 70870880 | 70870825 | ID=Msa0518970-mRNA-1:exon:19370;Parent=Msa0518970-mRNA-1 |
| chr3_4 | exon | 70870901 | 70871048 | 70870901 | ID=Msa0518970-mRNA-1:exon:19371;Parent=Msa0518970-mRNA-1 |
| chr3_4 | exon | 70871131 | 70871319 | 70871131 | ID=Msa0518970-mRNA-1:exon:19372;Parent=Msa0518970-mRNA-1 |
| chr3_4 | exon | 70871398 | 70871475 | 70871398 | ID=Msa0518970-mRNA-1:exon:19373;Parent=Msa0518970-mRNA-1 |
| chr3_4 | exon | 70871576 | 70871770 | 70871576 | ID=Msa0518970-mRNA-1:exon:19374;Parent=Msa0518970-mRNA-1 |
| chr3_4 | exon | 70872625 | 70872633 | 70872625 | ID=Msa0518970-mRNA-1:exon:19375;Parent=Msa0518970-mRNA-1 |
| chr3_4 | CDS | 70868904 | 70869023 | 70868904 | ID=Msa0518970-mRNA-1:cds;Parent=Msa0518970-mRNA-1 |
| chr3_4 | CDS | 70869831 | 70870001 | 70869831 | ID=Msa0518970-mRNA-1:cds;Parent=Msa0518970-mRNA-1 |
| chr3_4 | CDS | 70870086 | 70870283 | 70870086 | ID=Msa0518970-mRNA-1:cds;Parent=Msa0518970-mRNA-1 |
| chr3_4 | CDS | 70870360 | 70870591 | 70870360 | ID=Msa0518970-mRNA-1:cds;Parent=Msa0518970-mRNA-1 |
| chr3_4 | CDS | 70870604 | 70870719 | 70870604 | ID=Msa0518970-mRNA-1:cds;Parent=Msa0518970-mRNA-1 |
| chr3_4 | CDS | 70870825 | 70870880 | 70870825 | ID=Msa0518970-mRNA-1:cds;Parent=Msa0518970-mRNA-1 |
| chr3_4 | CDS | 70870901 | 70871048 | 70870901 | ID=Msa0518970-mRNA-1:cds;Parent=Msa0518970-mRNA-1 |
| chr3_4 | CDS | 70871131 | 70871319 | 70871131 | ID=Msa0518970-mRNA-1:cds;Parent=Msa0518970-mRNA-1 |
| chr3_4 | CDS | 70871398 | 70871475 | 70871398 | ID=Msa0518970-mRNA-1:cds;Parent=Msa0518970-mRNA-1 |
| chr3_4 | CDS | 70871576 | 70871770 | 70871576 | ID=Msa0518970-mRNA-1:cds;Parent=Msa0518970-mRNA-1 |
| chr3_4 | CDS | 70872625 | 70872633 | 70872625 | ID=Msa0518970-mRNA-1:cds;Parent=Msa0518970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
