Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0234320 | GAU39681.1 | 62.445 | 458 | 169 | 2 | 1 | 456 | 1 | 457 | 0.0 | 617 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0234320 | sp|P22336|RFA1_YEAST | 27.405 | 343 | 219 | 14 | 51 | 378 | 226 | 553 | 1.38e-15 | 82.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0234320 | A0A2Z6N7P2 | 62.445 | 458 | 169 | 2 | 1 | 456 | 1 | 457 | 0.0 | 617 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0062170 | Msa0234320 | 0.850900 | 1.259241e-60 | -8.615850e-47 |
| Msa0164160 | Msa0234320 | 0.803774 | 2.969747e-49 | -8.615850e-47 |
| Msa0207360 | Msa0234320 | 0.802865 | 4.580776e-49 | -8.615850e-47 |
| Msa0207410 | Msa0234320 | 0.809754 | 1.618691e-50 | -8.615850e-47 |
| Msa0234270 | Msa0234320 | 0.970252 | 2.462301e-131 | -8.615850e-47 |
| Msa0234320 | Msa0394280 | 0.805695 | 1.178801e-49 | -8.615850e-47 |
| Msa0234320 | Msa0483040 | 0.875437 | 3.082884e-68 | -8.615850e-47 |
| Msa0234320 | Msa0518950 | 0.834395 | 3.072042e-56 | -8.615850e-47 |
| Msa0234320 | Msa0518970 | 0.804055 | 2.596143e-49 | -8.615850e-47 |
| Msa0234320 | Msa0715520 | 0.919299 | 5.352717e-87 | -8.615850e-47 |
| Msa0234320 | Msa0750650 | 0.821688 | 3.534985e-53 | -8.615850e-47 |
| Msa0234320 | Msa0767410 | 0.977775 | 1.846569e-144 | -8.615850e-47 |
| Msa0234320 | Msa0832050 | 0.813740 | 2.196968e-51 | -8.615850e-47 |
| Msa0234320 | Msa0917830 | 0.808518 | 2.977358e-50 | -8.615850e-47 |
| Msa0234320 | Msa0934320 | 0.901017 | 4.098645e-78 | -8.615850e-47 |
| Msa0234320 | Msa1099960 | 0.810994 | 8.740412e-51 | -8.615850e-47 |
| Msa0234320 | Msa1350680 | 0.935089 | 1.465410e-96 | -8.615850e-47 |
| Msa0234320 | Msa1406120 | 0.803433 | 3.494432e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0234320 | MtrunA17_Chr1g0206481 | 49.474 | 285 | 143 | 1 | 7 | 291 | 2 | 285 | 1.18e-99 | 300 |
| Msa0234320 | MtrunA17_Chr2g0278111 | 39.649 | 285 | 171 | 1 | 7 | 291 | 2 | 285 | 9.59e-73 | 232 |
| Msa0234320 | MtrunA17_Chr5g0411141 | 39.649 | 285 | 171 | 1 | 7 | 291 | 3 | 286 | 1.28e-72 | 231 |
| Msa0234320 | MtrunA17_Chr3g0096071 | 47.248 | 218 | 109 | 2 | 129 | 343 | 9 | 223 | 2.73e-72 | 228 |
| Msa0234320 | MtrunA17_Chr4g0014311 | 48.438 | 192 | 99 | 0 | 263 | 454 | 1 | 192 | 6.02e-64 | 208 |
| Msa0234320 | MtrunA17_Chr5g0423441 | 37.603 | 242 | 150 | 1 | 7 | 248 | 2 | 242 | 1.12e-57 | 191 |
| Msa0234320 | MtrunA17_Chr2g0280031 | 39.035 | 228 | 129 | 2 | 28 | 246 | 4 | 230 | 8.21e-54 | 181 |
| Msa0234320 | MtrunA17_Chr1g0158831 | 46.575 | 146 | 78 | 0 | 146 | 291 | 3 | 148 | 8.11e-47 | 160 |
| Msa0234320 | MtrunA17_Chr5g0421841 | 33.333 | 210 | 138 | 2 | 7 | 216 | 2 | 209 | 2.15e-37 | 135 |
| Msa0234320 | MtrunA17_Chr3g0112231 | 41.447 | 152 | 80 | 1 | 197 | 348 | 5 | 147 | 1.31e-34 | 129 |
| Msa0234320 | MtrunA17_Chr1g0167871 | 26.247 | 381 | 266 | 9 | 37 | 407 | 231 | 606 | 9.42e-33 | 131 |
| Msa0234320 | MtrunA17_Chr8g0365271 | 53.535 | 99 | 46 | 0 | 343 | 441 | 5 | 103 | 3.45e-29 | 113 |
| Msa0234320 | MtrunA17_Chr3g0138341 | 49.515 | 103 | 46 | 2 | 343 | 445 | 20 | 116 | 6.81e-24 | 97.1 |
| Msa0234320 | MtrunA17_Chr4g0044661 | 26.996 | 263 | 173 | 10 | 12 | 264 | 13 | 266 | 3.91e-23 | 102 |
| Msa0234320 | MtrunA17_Chr5g0444831 | 50.549 | 91 | 45 | 0 | 351 | 441 | 1 | 91 | 6.01e-23 | 95.9 |
| Msa0234320 | MtrunA17_Chr2g0304851 | 24.148 | 352 | 233 | 10 | 37 | 377 | 30 | 358 | 6.90e-23 | 100 |
| Msa0234320 | MtrunA17_Chr1g0212881 | 46.154 | 91 | 45 | 1 | 351 | 441 | 1 | 87 | 5.53e-20 | 85.5 |
| Msa0234320 | MtrunA17_Chr2g0279021 | 25.532 | 282 | 191 | 7 | 178 | 452 | 13 | 282 | 7.23e-19 | 88.2 |
| Msa0234320 | MtrunA17_Chr6g0469931 | 28.870 | 239 | 156 | 8 | 15 | 247 | 10 | 240 | 1.61e-18 | 88.6 |
| Msa0234320 | MtrunA17_Chr5g0421741 | 33.846 | 130 | 85 | 1 | 7 | 136 | 2 | 130 | 1.28e-17 | 80.5 |
| Msa0234320 | MtrunA17_Chr1g0148711 | 33.846 | 130 | 85 | 1 | 7 | 136 | 2 | 130 | 1.28e-17 | 80.5 |
| Msa0234320 | MtrunA17_Chr7g0231491 | 28.571 | 182 | 125 | 4 | 37 | 215 | 60 | 239 | 2.52e-15 | 75.9 |
| Msa0234320 | MtrunA17_Chr3g0093401 | 25.833 | 240 | 167 | 4 | 7 | 245 | 2 | 231 | 3.04e-15 | 75.1 |
| Msa0234320 | MtrunA17_Chr4g0019691 | 28.082 | 146 | 103 | 2 | 297 | 441 | 23 | 167 | 8.08e-15 | 72.8 |
| Msa0234320 | MtrunA17_Chr4g0003711 | 46.970 | 66 | 19 | 1 | 293 | 358 | 8 | 57 | 3.04e-13 | 64.3 |
| Msa0234320 | MtrunA17_Chr1g0148611 | 31.481 | 162 | 97 | 5 | 64 | 215 | 4 | 161 | 1.07e-12 | 65.9 |
| Msa0234320 | MtrunA17_Chr6g0462951 | 32.812 | 128 | 83 | 3 | 91 | 217 | 2 | 127 | 1.08e-12 | 65.5 |
| Msa0234320 | MtrunA17_Chr2g0300061 | 45.902 | 61 | 33 | 0 | 381 | 441 | 6 | 66 | 1.18e-12 | 63.5 |
| Msa0234320 | MtrunA17_Chr5g0393531 | 26.904 | 197 | 127 | 5 | 37 | 229 | 26 | 209 | 1.23e-12 | 67.0 |
| Msa0234320 | MtrunA17_Chr7g0259081 | 29.197 | 137 | 95 | 2 | 28 | 163 | 23 | 158 | 2.77e-12 | 65.1 |
| Msa0234320 | MtrunA17_Chr8g0363071 | 30.380 | 158 | 103 | 3 | 56 | 210 | 2 | 155 | 3.05e-12 | 64.7 |
| Msa0234320 | MtrunA17_Chr1g0168201 | 29.839 | 124 | 86 | 1 | 334 | 456 | 9 | 132 | 3.96e-11 | 61.2 |
| Msa0234320 | MtrunA17_Chr5g0420451 | 26.087 | 184 | 118 | 5 | 37 | 217 | 27 | 195 | 4.41e-11 | 62.8 |
| Msa0234320 | MtrunA17_Chr2g0309041 | 39.189 | 74 | 44 | 1 | 49 | 122 | 1 | 73 | 5.67e-11 | 59.3 |
| Msa0234320 | MtrunA17_Chr6g0471721 | 31.579 | 95 | 64 | 1 | 341 | 435 | 12 | 105 | 8.85e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0234320 | AT1G52950.1 | 25.342 | 438 | 301 | 12 | 25 | 446 | 22 | 449 | 2.30e-34 | 135 |
| Msa0234320 | AT2G05642.1 | 22.271 | 458 | 279 | 9 | 24 | 446 | 19 | 434 | 5.74e-33 | 131 |
| Msa0234320 | AT5G08020.1 | 23.020 | 404 | 287 | 12 | 23 | 410 | 170 | 565 | 9.99e-14 | 73.9 |
| Msa0234320 | AT4G19130.1 | 22.126 | 461 | 320 | 15 | 23 | 453 | 241 | 692 | 9.83e-11 | 64.7 |
Find 154 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGATTCAGTTTGTACTTA+TGG | 0.163311 | 2_2:-7051660 | None:intergenic |
| GTTCCTTTCATGAAATTAAT+TGG | 0.178240 | 2_2:-7048983 | None:intergenic |
| ACCTGAGGTTGCAAGCTATT+TGG | 0.202952 | 2_2:+7052252 | Msa0234320:CDS |
| CAACAGCTTTGTTCCATAAA+AGG | 0.208934 | 2_2:-7052215 | None:intergenic |
| ATGAATTGAAAATGTCTCTT+AGG | 0.223571 | 2_2:-7051727 | None:intergenic |
| ATCAGTTGTCATCTTCTTTA+CGG | 0.226777 | 2_2:-7053195 | None:intergenic |
| TCTAGAGTTACTGTCATTAA+TGG | 0.230148 | 2_2:+7052693 | Msa0234320:CDS |
| GCATTTGGTTCCTATATTTA+AGG | 0.232056 | 2_2:+7051558 | Msa0234320:CDS |
| ATCGAATTCACTGCACTCTT+TGG | 0.252831 | 2_2:+7052071 | Msa0234320:CDS |
| CGCATTGTTGCACAAGGTTT+GGG | 0.261019 | 2_2:+7052923 | Msa0234320:CDS |
| AAGCTTCTCAATAACATAAA+TGG | 0.261519 | 2_2:-7051599 | None:intergenic |
| CTTGAAGGAGGGGTAATATC+TGG | 0.290934 | 2_2:+7053460 | Msa0234320:three_prime_UTR |
| AGGCCACCATTTGTAGCTTT+TGG | 0.295024 | 2_2:+7050184 | Msa0234320:five_prime_UTR |
| GGATGCGACATTGGAGGATT+TGG | 0.308356 | 2_2:+7051966 | Msa0234320:CDS |
| AGCACAACAACAGGGAGTTT+TGG | 0.310947 | 2_2:-7052139 | None:intergenic |
| AAGATTCAGTTTGTACTTAT+GGG | 0.314832 | 2_2:-7051659 | None:intergenic |
| CATGTCTTTCCTTGAAATCA+TGG | 0.320102 | 2_2:+7051747 | Msa0234320:CDS |
| ACAAATAGGTTCAGTTCTTC+AGG | 0.321570 | 2_2:-7053104 | None:intergenic |
| AGGGTAGGGTTATCAATCTT+TGG | 0.322960 | 2_2:+7050434 | Msa0234320:CDS |
| ATATGTTGAAGCTGTTTCTA+AGG | 0.331376 | 2_2:+7053368 | Msa0234320:CDS |
| ACATCCTCTTGTCAACAAAT+AGG | 0.342564 | 2_2:-7053118 | None:intergenic |
| GGAACAATTGAAACGTTTCT+TGG | 0.348138 | 2_2:+7052105 | Msa0234320:CDS |
| TCAAACTGATCCTTAAATAT+AGG | 0.354256 | 2_2:-7051568 | None:intergenic |
| TCGCATTGTTGCACAAGGTT+TGG | 0.355653 | 2_2:+7052922 | Msa0234320:CDS |
| ACCAACAATGTCTGCAAACT+TGG | 0.361386 | 2_2:-7050389 | None:intergenic |
| CTAGAGTTACTGTCATTAAT+GGG | 0.366939 | 2_2:+7052694 | Msa0234320:CDS |
| ATCTGAATGAGCACAACAAC+AGG | 0.368243 | 2_2:-7052148 | None:intergenic |
| TGGTCCTATTGTTGTTCCTT+TGG | 0.372101 | 2_2:+7052431 | Msa0234320:CDS |
| GGGACGGTCTGCGCAGGACT+TGG | 0.373460 | 2_2:+7052943 | Msa0234320:CDS |
| TCGAATTCACTGCACTCTTT+GGG | 0.374389 | 2_2:+7052072 | Msa0234320:CDS |
| TCTGCAAACTTGGTGAGCTT+TGG | 0.374688 | 2_2:-7050379 | None:intergenic |
| TTATGTTATTGAGAAGCTTA+TGG | 0.375409 | 2_2:+7051603 | Msa0234320:CDS |
| GAAATGTGTGGGAACTGTTT+TGG | 0.377654 | 2_2:+7052608 | Msa0234320:intron |
| AAGAAGTACTTTGGTGCAAT+GGG | 0.383350 | 2_2:+7052181 | Msa0234320:CDS |
| GCCTCTTCCTCATGATTCCC+AGG | 0.394375 | 2_2:-7053342 | None:intergenic |
| ACGCGATTCATTTCGCATCA+TGG | 0.400891 | 2_2:+7053230 | Msa0234320:CDS |
| AAATCCTCTATAGTCATTCT+CGG | 0.414327 | 2_2:-7052474 | None:intergenic |
| GTCTCTTATGACCAGGTTCA+AGG | 0.415332 | 2_2:+7052847 | Msa0234320:intron |
| TTATATCCCCAGGTTATCAT+TGG | 0.419559 | 2_2:+7053504 | Msa0234320:three_prime_UTR |
| TGGGACAAACATTGGGCAAA+AGG | 0.424304 | 2_2:+7053480 | Msa0234320:three_prime_UTR |
| TCCAAATAGCTTGCAACCTC+AGG | 0.425782 | 2_2:-7052253 | None:intergenic |
| TGTCGCATCCATCACCTTGT+TGG | 0.426183 | 2_2:-7051953 | None:intergenic |
| TGATAACCCTACCCTGGATC+TGG | 0.427073 | 2_2:-7050426 | None:intergenic |
| TCAGCCAAAGGAACAACAAT+AGG | 0.427225 | 2_2:-7052435 | None:intergenic |
| ATGTCTCTTAGGGATTTCAT+TGG | 0.430665 | 2_2:-7051716 | None:intergenic |
| TAATATCTGGGACAAACATT+GGG | 0.434384 | 2_2:+7053473 | Msa0234320:three_prime_UTR |
| TCAAGAGATGAAGATTTGTA+TGG | 0.436008 | 2_2:+7049112 | Msa0234320:intron |
| TGAATTGAAAATGTCTCTTA+GGG | 0.436848 | 2_2:-7051726 | None:intergenic |
| AGGAATATTGACCACAACTT+AGG | 0.439178 | 2_2:+7053388 | Msa0234320:exon |
| CGAAGGGGCCAATGATAACC+TGG | 0.442936 | 2_2:-7053512 | None:intergenic |
| TACCGCGGCGGAGGAAGAAA+AGG | 0.449431 | 2_2:-7049021 | None:intergenic |
| AGTAACTCTAGAAGCACATT+TGG | 0.450148 | 2_2:-7052682 | None:intergenic |
| CGTTTCAACGCAGCTGAAGC+TGG | 0.450711 | 2_2:+7050469 | Msa0234320:CDS |
| GAGGATGTTGTTTAAAGTTG+AGG | 0.454784 | 2_2:+7053133 | Msa0234320:CDS |
| AATCAAATCTGTATCGCAAC+TGG | 0.455365 | 2_2:+7053162 | Msa0234320:CDS |
| TCAAATCGACGCCGAGAATA+GGG | 0.456796 | 2_2:-7048890 | None:intergenic |
| GTCAAATCGACGCCGAGAAT+AGG | 0.458532 | 2_2:-7048891 | None:intergenic |
| TGTGGCAGGCCATGATTTCA+AGG | 0.458715 | 2_2:-7051756 | None:intergenic |
| CATGAAATTAATTGGACCAA+TGG | 0.459369 | 2_2:-7048975 | None:intergenic |
| TGCAAGTGTCAGGAAGCATT+TGG | 0.459729 | 2_2:+7051543 | Msa0234320:CDS |
| TGACAATCCATGCAAGTGTC+AGG | 0.462004 | 2_2:+7051533 | Msa0234320:CDS |
| ATGGGAAAATATGTTCTTGA+AGG | 0.466334 | 2_2:+7053445 | Msa0234320:three_prime_UTR |
| TCATACGCCCACCCTATTCT+CGG | 0.466614 | 2_2:+7048879 | Msa0234320:five_prime_UTR |
| TCATGAAAGGAACAACTTTG+TGG | 0.469039 | 2_2:+7048993 | Msa0234320:five_prime_UTR |
| AAACAAACCTTTGGATGCCA+TGG | 0.474075 | 2_2:-7050264 | None:intergenic |
| GGTCCAATTAATTTCATGAA+AGG | 0.475134 | 2_2:+7048980 | Msa0234320:five_prime_UTR |
| TCTCGACGAGGGCTTTCCAT+TGG | 0.475662 | 2_2:+7048959 | Msa0234320:five_prime_UTR |
| CAGCTTCAGCTGCGTTGAAA+CGG | 0.476249 | 2_2:-7050468 | None:intergenic |
| GGAAAATATGTTCTTGAAGG+AGG | 0.476421 | 2_2:+7053448 | Msa0234320:three_prime_UTR |
| CACAAGGAGGATCGCTTGAT+AGG | 0.477160 | 2_2:+7051775 | Msa0234320:CDS |
| GGCAAAAGGTTTATATCCCC+AGG | 0.477172 | 2_2:+7053494 | Msa0234320:three_prime_UTR |
| CTATCATCCATGTACTACTT+AGG | 0.480805 | 2_2:+7049983 | Msa0234320:five_prime_UTR |
| GAAAATATGTTCTTGAAGGA+GGG | 0.483278 | 2_2:+7053449 | Msa0234320:three_prime_UTR |
| CAAGGTGATGGATGCGACAT+TGG | 0.484095 | 2_2:+7051957 | Msa0234320:CDS |
| GTAATATCTGGGACAAACAT+TGG | 0.484464 | 2_2:+7053472 | Msa0234320:three_prime_UTR |
| AATGCTTCCTGACACTTGCA+TGG | 0.486468 | 2_2:-7051540 | None:intergenic |
| AAGGATTGACTTCCAGATCC+AGG | 0.487161 | 2_2:+7050414 | Msa0234320:CDS |
| ACGCTTGGTTATAACAAAGA+TGG | 0.487962 | 2_2:+7053426 | Msa0234320:three_prime_UTR |
| TGCAAGCTTAAGAAGTACTT+TGG | 0.488269 | 2_2:+7052172 | Msa0234320:CDS |
| TATATTTAAGGATCAGTTTG+AGG | 0.489409 | 2_2:+7051570 | Msa0234320:CDS |
| ACCAAGTTTGCAGACATTGT+TGG | 0.493260 | 2_2:+7050388 | Msa0234320:CDS |
| ATCCTTGAGCTTGAAAATAG+TGG | 0.496930 | 2_2:-7051692 | None:intergenic |
| TAAGAAGTACTTTGGTGCAA+TGG | 0.497050 | 2_2:+7052180 | Msa0234320:CDS |
| AAAGCCCCTTACCGCGGCGG+AGG | 0.500473 | 2_2:-7049030 | None:intergenic |
| TCAGCTGCGTTGAAACGGTC+AGG | 0.503479 | 2_2:-7050463 | None:intergenic |
| CAAGTAGTTAGTCAAATGTC+TGG | 0.515004 | 2_2:+7052411 | Msa0234320:CDS |
| TTTAAGGATCAGTTTGAGGA+AGG | 0.515351 | 2_2:+7051574 | Msa0234320:CDS |
| TGTTCAAGCACTATAAATAC+AGG | 0.517194 | 2_2:+7050164 | Msa0234320:five_prime_UTR |
| CAAGCGATCCTCCTTGTGGC+AGG | 0.518463 | 2_2:-7051770 | None:intergenic |
| GCCTGGGAATCATGAGGAAG+AGG | 0.518637 | 2_2:+7053341 | Msa0234320:intron |
| TTGCAGACATTGTTGGTGGA+AGG | 0.522383 | 2_2:+7050395 | Msa0234320:CDS |
| ACCTGCAAATCAAAATCCTC+CGG | 0.522646 | 2_2:-7049171 | None:intergenic |
| CGCTTGGTTATAACAAAGAT+GGG | 0.524858 | 2_2:+7053427 | Msa0234320:three_prime_UTR |
| TGGGGAGTAGTCTTAAATGT+TGG | 0.525238 | 2_2:-7051640 | None:intergenic |
| GCATGACCAAAAGCTACAAA+TGG | 0.530803 | 2_2:-7050190 | None:intergenic |
| TTTGTGCAACGGAACACGCT+TGG | 0.536468 | 2_2:+7053411 | Msa0234320:three_prime_UTR |
| CTCGCCTTGACAGATGTCAT+TGG | 0.539535 | 2_2:+7051880 | Msa0234320:intron |
| TGCCTCGGACCGCTGTGCCA+AGG | 0.540195 | 2_2:+7052742 | Msa0234320:CDS |
| TGGGAAGACCAACAAGGTGA+TGG | 0.541783 | 2_2:+7051945 | Msa0234320:CDS |
| AGGTTTGGGACGGTCTGCGC+AGG | 0.545453 | 2_2:+7052937 | Msa0234320:CDS |
| TGAACCTATTTGTTGACAAG+AGG | 0.547444 | 2_2:+7053114 | Msa0234320:CDS |
| CGCCTTGGCACAGCGGTCCG+AGG | 0.551071 | 2_2:-7052744 | None:intergenic |
| TGTGAGCTTGAGTCTGATGT+TGG | 0.551773 | 2_2:+7052639 | Msa0234320:CDS |
| TTGAAGGAGGGGTAATATCT+GGG | 0.552967 | 2_2:+7053461 | Msa0234320:three_prime_UTR |
| GTGAGCTTGAGTCTGATGTT+GGG | 0.554366 | 2_2:+7052640 | Msa0234320:CDS |
| GGATGATAGAATAAATTATG+AGG | 0.554822 | 2_2:-7049969 | None:intergenic |
| AGATTCAGTTTGTACTTATG+GGG | 0.556764 | 2_2:-7051658 | None:intergenic |
| GGTGATGGATGCGACATTGG+AGG | 0.560916 | 2_2:+7051960 | Msa0234320:CDS |
| AAGTTTGCAGACATTGTTGG+TGG | 0.561560 | 2_2:+7050391 | Msa0234320:CDS |
| TTTCCGATCGGTGCATGTGG+TGG | 0.563662 | 2_2:-7048913 | None:intergenic |
| AAAATATGTTCTTGAAGGAG+GGG | 0.565111 | 2_2:+7053450 | Msa0234320:three_prime_UTR |
| ATCTGTTCCTAAGTAGTACA+TGG | 0.567551 | 2_2:-7049990 | None:intergenic |
| TACTGCTTAGGAACAGATGC+AGG | 0.569954 | 2_2:+7049933 | Msa0234320:intron |
| TGACCACCACATGCACCGAT+CGG | 0.572463 | 2_2:+7048910 | Msa0234320:five_prime_UTR |
| ATTCAAGTTATTGATAACAC+TGG | 0.573096 | 2_2:+7052875 | Msa0234320:CDS |
| AATTCACTGCACTCTTTGGG+AGG | 0.575511 | 2_2:+7052075 | Msa0234320:CDS |
| TTTCTTCATCCTCTCGACGA+GGG | 0.577829 | 2_2:+7048948 | Msa0234320:five_prime_UTR |
| TGACTTCCAGATCCAGGGTA+GGG | 0.580257 | 2_2:+7050420 | Msa0234320:CDS |
| ACCGCGGCGGAGGAAGAAAA+GGG | 0.583013 | 2_2:-7049020 | None:intergenic |
| TACTACTTAGGAACAGATGC+AGG | 0.584018 | 2_2:+7049995 | Msa0234320:five_prime_UTR |
| TTAAGGATCAGTTTGAGGAA+GGG | 0.584089 | 2_2:+7051575 | Msa0234320:CDS |
| GTGATAAGTGCAGCATGCCT+CGG | 0.585969 | 2_2:+7052727 | Msa0234320:CDS |
| TTGTTGCACAAGGTTTGGGA+CGG | 0.587962 | 2_2:+7052927 | Msa0234320:CDS |
| TGAAATCATGGCCTGCCACA+AGG | 0.593472 | 2_2:+7051759 | Msa0234320:CDS |
| GAAGGGGCCAATGATAACCT+GGG | 0.596263 | 2_2:-7053511 | None:intergenic |
| TACGCCGAGAATGACTATAG+AGG | 0.602129 | 2_2:+7052470 | Msa0234320:CDS |
| TTGACTTCCAGATCCAGGGT+AGG | 0.606877 | 2_2:+7050419 | Msa0234320:CDS |
| AACAAATCCATGGCATCCAA+AGG | 0.609245 | 2_2:+7050257 | Msa0234320:exon |
| CACAACTTAGGTTTGTGCAA+CGG | 0.609655 | 2_2:+7053400 | Msa0234320:three_prime_UTR |
| AATGGAAAGCCCTCGTCGAG+AGG | 0.609814 | 2_2:-7048957 | None:intergenic |
| TTTGATCGCATTGTTGCACA+AGG | 0.610076 | 2_2:+7052917 | Msa0234320:CDS |
| CACTCTTTGGGAGGACTATG+CGG | 0.612846 | 2_2:+7052084 | Msa0234320:CDS |
| AGGATTGACTTCCAGATCCA+GGG | 0.616176 | 2_2:+7050415 | Msa0234320:CDS |
| AGCTTGAGTCTGATGTTGGG+TGG | 0.620026 | 2_2:+7052643 | Msa0234320:CDS |
| TAGGATGAATGAAGCACATG+TGG | 0.620157 | 2_2:+7052380 | Msa0234320:intron |
| AATCGACGCCGAGAATAGGG+TGG | 0.624759 | 2_2:-7048887 | None:intergenic |
| AAAGATTGATAACCCTACCC+TGG | 0.625407 | 2_2:-7050432 | None:intergenic |
| TGACCAAAAGCTACAAATGG+TGG | 0.631136 | 2_2:-7050187 | None:intergenic |
| CTTGGTTGATGCCATTGCTG+AGG | 0.633548 | 2_2:+7052961 | Msa0234320:CDS |
| ATCGACGCCGAGAATAGGGT+GGG | 0.640118 | 2_2:-7048886 | None:intergenic |
| CGTTGCACAAACCTAAGTTG+TGG | 0.644679 | 2_2:-7053399 | None:intergenic |
| CTATCAAGCGATCCTCCTTG+TGG | 0.646986 | 2_2:-7051774 | None:intergenic |
| GTTTGATGTTGAGATACCTG+AGG | 0.650353 | 2_2:+7052237 | Msa0234320:CDS |
| CAGAGTAAGTCATCAGCCAA+AGG | 0.651730 | 2_2:-7052447 | None:intergenic |
| TACAAACTGAATCTTATGAG+AGG | 0.653843 | 2_2:+7051667 | Msa0234320:CDS |
| GTCTCAGCCTGGGAATCATG+AGG | 0.658338 | 2_2:+7053335 | Msa0234320:intron |
| GGATTTGATTGAATCCTCTG+AGG | 0.667495 | 2_2:+7052491 | Msa0234320:CDS |
| AGAAGTACTTTGGTGCAATG+GGG | 0.672161 | 2_2:+7052182 | Msa0234320:CDS |
| GGAAAAGCCCCTTACCGCGG+CGG | 0.672531 | 2_2:-7049033 | None:intergenic |
| TATATCTCGCCTTGGCACAG+CGG | 0.690908 | 2_2:-7052751 | None:intergenic |
| AAGGGGCCAATGATAACCTG+GGG | 0.700542 | 2_2:-7053510 | None:intergenic |
| TCTGAATGAGCACAACAACA+GGG | 0.707304 | 2_2:-7052147 | None:intergenic |
| AATCATGGCCTGCCACAAGG+AGG | 0.724370 | 2_2:+7051762 | Msa0234320:CDS |
| AAAACGCTCTGCAATTAACG+CGG | 0.726871 | 2_2:-7049147 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATAAATCTTTCATAATT+TGG | - | chr2_2:7051178-7051197 | None:intergenic | 10.0% |
| !!! | TTTTTAGAAAAAAAATTTGA+TGG | + | chr2_2:7051269-7051288 | Msa0234320:intron | 10.0% |
| !! | ATAAAAATCATAATTATTAG+AGG | - | chr2_2:7051310-7051329 | None:intergenic | 10.0% |
| !!! | TTTTATTTTTTTCATTACTT+TGG | + | chr2_2:7052303-7052322 | Msa0234320:intron | 10.0% |
| !!! | TTGATTTTTTTTTATGTTTC+TGG | + | chr2_2:7049308-7049327 | Msa0234320:intron | 15.0% |
| !!! | TGATTTTTTTTTATGTTTCT+GGG | + | chr2_2:7049309-7049328 | Msa0234320:intron | 15.0% |
| !! | CATTTATAAAAGTAATAAAC+TGG | + | chr2_2:7049533-7049552 | Msa0234320:intron | 15.0% |
| !! | TTAGATAAATAAATACATAC+AGG | + | chr2_2:7049628-7049647 | Msa0234320:intron | 15.0% |
| !!! | TATAATTTTAAAGTCATTGA+TGG | + | chr2_2:7050587-7050606 | Msa0234320:intron | 15.0% |
| !!! | ATAATTTTAAAGTCATTGAT+GGG | + | chr2_2:7050588-7050607 | Msa0234320:intron | 15.0% |
| !! | AGACATAATAAATAATAGTT+TGG | - | chr2_2:7053059-7053078 | None:intergenic | 15.0% |
| !!! | TATTTTGAAATATAATTGTC+AGG | - | chr2_2:7053281-7053300 | None:intergenic | 15.0% |
| !! | AGATATTTAAGAACAAATAC+TGG | - | chr2_2:7049224-7049243 | None:intergenic | 20.0% |
| !! | GTTCTTAAATATCTCATTAA+TGG | + | chr2_2:7049230-7049249 | Msa0234320:intron | 20.0% |
| !!! | ATATCTCATTAATGGATTAA+TGG | + | chr2_2:7049238-7049257 | Msa0234320:intron | 20.0% |
| !!! | ACATTTTCTTTTTATTCTAG+TGG | - | chr2_2:7049601-7049620 | None:intergenic | 20.0% |
| !! | GATGAATAAAAAATACCAAA+TGG | - | chr2_2:7049720-7049739 | None:intergenic | 20.0% |
| !! | AATATAAAATCCTAAAAGCA+AGG | - | chr2_2:7049785-7049804 | None:intergenic | 20.0% |
| !!! | GATTTTATATTCTTTGCTTT+TGG | + | chr2_2:7049794-7049813 | Msa0234320:intron | 20.0% |
| !!! | TTTTTATTCATCATATGCAT+AGG | + | chr2_2:7049820-7049839 | Msa0234320:intron | 20.0% |
| !! | TATGACAACAAATATGAAAT+TGG | - | chr2_2:7050297-7050316 | None:intergenic | 20.0% |
| !!! | TGTTACCATGTTTTTTTTTT+TGG | + | chr2_2:7050687-7050706 | Msa0234320:intron | 20.0% |
| !!! | AGACTTCATTTTTATTCATT+TGG | + | chr2_2:7050798-7050817 | Msa0234320:intron | 20.0% |
| !! | CAAGTTTAATTAACTAAATC+TGG | - | chr2_2:7051487-7051506 | None:intergenic | 20.0% |
| !!! | ACATTGAATTGTTTTATTCT+AGG | + | chr2_2:7051507-7051526 | Msa0234320:intron | 20.0% |
| !!! | CATTGAATTGTTTTATTCTA+GGG | + | chr2_2:7051508-7051527 | Msa0234320:intron | 20.0% |
| !!! | TGTTTTTGTTTGTTGTTATA+TGG | + | chr2_2:7051818-7051837 | Msa0234320:intron | 20.0% |
| !! | ACATATACTTATATTTGATC+TGG | + | chr2_2:7052352-7052371 | Msa0234320:intron | 20.0% |
| !! | AGATATAATTTACTGAAATC+AGG | + | chr2_2:7052767-7052786 | Msa0234320:intron | 20.0% |
| !!! | TTTCTTGAATATTTTTTGGT+AGG | - | chr2_2:7053027-7053046 | None:intergenic | 20.0% |
| !!! | AAGGTTTCTTGAATATTTTT+TGG | - | chr2_2:7053031-7053050 | None:intergenic | 20.0% |
| !!! | ATAATCTTACTTTTTCCGAT+CGG | - | chr2_2:7048928-7048947 | None:intergenic | 25.0% |
| ! | GTTCCTTTCATGAAATTAAT+TGG | - | chr2_2:7048986-7049005 | None:intergenic | 25.0% |
| ! | AGAAGAAGAAATACAAAGTA+TGG | - | chr2_2:7049064-7049083 | None:intergenic | 25.0% |
| ! | ATACTTTGTATTTCTTCTTC+TGG | + | chr2_2:7049063-7049082 | Msa0234320:intron | 25.0% |
| !!! | TTATACACTACTTTTTACAC+AGG | + | chr2_2:7049442-7049461 | Msa0234320:intron | 25.0% |
| ! | TTACACAGGAAGAAAAATAA+TGG | + | chr2_2:7049456-7049475 | Msa0234320:intron | 25.0% |
| ! | AAATACATACAGGAGAAAAT+AGG | + | chr2_2:7049638-7049657 | Msa0234320:intron | 25.0% |
| !! | TTTTACTTCATGGATATTTG+TGG | - | chr2_2:7049684-7049703 | None:intergenic | 25.0% |
| ! | GGATGATAGAATAAATTATG+AGG | - | chr2_2:7049972-7049991 | None:intergenic | 25.0% |
| !!! | AATAAGTGTTTTTGAAAGCA+TGG | - | chr2_2:7050066-7050085 | None:intergenic | 25.0% |
| ! | TATCTTCAAAGTAAAGCAAA+AGG | + | chr2_2:7050560-7050579 | Msa0234320:intron | 25.0% |
| !!! | ACCATGTTTTTTTTTTTGGA+AGG | + | chr2_2:7050691-7050710 | Msa0234320:intron | 25.0% |
| ! | TCCTTCCAAAAAAAAAAACA+TGG | - | chr2_2:7050695-7050714 | None:intergenic | 25.0% |
| !! | TATCATATAAAGGTACAACA+TGG | - | chr2_2:7050727-7050746 | None:intergenic | 25.0% |
| !!! | TTTGGTTCTCTAATTTTCTT+TGG | + | chr2_2:7050816-7050835 | Msa0234320:intron | 25.0% |
| !!! | AAAAGTTACTTTTAGCACAT+GGG | + | chr2_2:7050970-7050989 | Msa0234320:intron | 25.0% |
| ! | TGTTGCATAAAGATATAAGA+TGG | + | chr2_2:7051079-7051098 | Msa0234320:intron | 25.0% |
| ! | AGGAGAATTTATGTGAAAAT+TGG | - | chr2_2:7051366-7051385 | None:intergenic | 25.0% |
| !! | TATGAAAAGTTTCTTTTGAC+AGG | - | chr2_2:7051386-7051405 | None:intergenic | 25.0% |
| ! | TCAAACTGATCCTTAAATAT+AGG | - | chr2_2:7051571-7051590 | None:intergenic | 25.0% |
| ! | TATATTTAAGGATCAGTTTG+AGG | + | chr2_2:7051570-7051589 | Msa0234320:CDS | 25.0% |
| ! | AAGCTTCTCAATAACATAAA+TGG | - | chr2_2:7051602-7051621 | None:intergenic | 25.0% |
| ! | TTATGTTATTGAGAAGCTTA+TGG | + | chr2_2:7051603-7051622 | Msa0234320:CDS | 25.0% |
| ! | AAGATTCAGTTTGTACTTAT+GGG | - | chr2_2:7051662-7051681 | None:intergenic | 25.0% |
| ! | TAAGATTCAGTTTGTACTTA+TGG | - | chr2_2:7051663-7051682 | None:intergenic | 25.0% |
| ! | TGAATTGAAAATGTCTCTTA+GGG | - | chr2_2:7051729-7051748 | None:intergenic | 25.0% |
| ! | ATGAATTGAAAATGTCTCTT+AGG | - | chr2_2:7051730-7051749 | None:intergenic | 25.0% |
| !!! | GTGGTTTTTTTTAGTTAACT+AGG | + | chr2_2:7052517-7052536 | Msa0234320:intron | 25.0% |
| ! | CTTAAAAATAAGGATTCAAC+TGG | - | chr2_2:7052803-7052822 | None:intergenic | 25.0% |
| !!! | CAGTTGAATCCTTATTTTTA+AGG | + | chr2_2:7052801-7052820 | Msa0234320:intron | 25.0% |
| !! | ATTCAAGTTATTGATAACAC+TGG | + | chr2_2:7052875-7052894 | Msa0234320:CDS | 25.0% |
| !! | AAATAATAGTTTGGTGAGAA+AGG | - | chr2_2:7053050-7053069 | None:intergenic | 25.0% |
| ! | ATTATTTATTATGTCTGCAG+AGG | + | chr2_2:7053063-7053082 | Msa0234320:intron | 25.0% |
| CATGAAATTAATTGGACCAA+TGG | - | chr2_2:7048978-7048997 | None:intergenic | 30.0% | |
| GGTCCAATTAATTTCATGAA+AGG | + | chr2_2:7048980-7048999 | Msa0234320:five_prime_UTR | 30.0% | |
| AGAAGAAATACAAAGTATGG+TGG | - | chr2_2:7049061-7049080 | None:intergenic | 30.0% | |
| AATCTTCATCTCTTGAAAGT+AGG | - | chr2_2:7049108-7049127 | None:intergenic | 30.0% | |
| TCAAGAGATGAAGATTTGTA+TGG | + | chr2_2:7049112-7049131 | Msa0234320:intron | 30.0% | |
| AACAAATACTGGAAAGTAGA+AGG | - | chr2_2:7049213-7049232 | None:intergenic | 30.0% | |
| !! | TCTCATTAATGGATTAATGG+TGG | + | chr2_2:7049241-7049260 | Msa0234320:intron | 30.0% |
| !! | GGTTGAAATTTGTTATAAGC+TGG | + | chr2_2:7049262-7049281 | Msa0234320:intron | 30.0% |
| AAGAGTTGGAAGAACAATAA+TGG | + | chr2_2:7049388-7049407 | Msa0234320:intron | 30.0% | |
| AAAATCCTAAAAGCAAGGAA+AGG | - | chr2_2:7049780-7049799 | None:intergenic | 30.0% | |
| ATATGCATAGAAACAAATGC+AGG | + | chr2_2:7049871-7049890 | Msa0234320:intron | 30.0% | |
| ! | AATTTCATGCGCTTTTGTTA+TGG | + | chr2_2:7050036-7050055 | Msa0234320:five_prime_UTR | 30.0% |
| TGTTCAAGCACTATAAATAC+AGG | + | chr2_2:7050164-7050183 | Msa0234320:five_prime_UTR | 30.0% | |
| GGAATTAAGAAACAAACCTT+TGG | - | chr2_2:7050276-7050295 | None:intergenic | 30.0% | |
| ! | GAATATGTAAGAGTGTGAAA+GGG | + | chr2_2:7050610-7050629 | Msa0234320:intron | 30.0% |
| TGTGCTTCTGTATCATATAA+AGG | - | chr2_2:7050737-7050756 | None:intergenic | 30.0% | |
| AGCACACAAATTCAACAAAT+TGG | + | chr2_2:7050751-7050770 | Msa0234320:intron | 30.0% | |
| AATCTCATCATAGAATTGAC+AGG | - | chr2_2:7050894-7050913 | None:intergenic | 30.0% | |
| !!! | GAAAAGTTACTTTTAGCACA+TGG | + | chr2_2:7050969-7050988 | Msa0234320:intron | 30.0% |
| !!! | AAAGTTACTTTTAGCACATG+GGG | + | chr2_2:7050971-7050990 | Msa0234320:intron | 30.0% |
| TAAGCATGAAGCATGAAAAT+TGG | + | chr2_2:7051047-7051066 | Msa0234320:intron | 30.0% | |
| ! | ATTATTTTCAACTCAGTAGC+AGG | - | chr2_2:7051207-7051226 | None:intergenic | 30.0% |
| ! | TGATTTTTATACCAAAGCTG+TGG | + | chr2_2:7051320-7051339 | Msa0234320:intron | 30.0% |
| ! | GCATTTGGTTCCTATATTTA+AGG | + | chr2_2:7051558-7051577 | Msa0234320:CDS | 30.0% |
| AGATTCAGTTTGTACTTATG+GGG | - | chr2_2:7051661-7051680 | None:intergenic | 30.0% | |
| TACAAACTGAATCTTATGAG+AGG | + | chr2_2:7051667-7051686 | Msa0234320:CDS | 30.0% | |
| TGAAAGTGACTGAGAAAAAT+GGG | + | chr2_2:7051926-7051945 | Msa0234320:CDS | 30.0% | |
| ! | TATGTAATGATCTTTTGCTG+CGG | + | chr2_2:7052019-7052038 | Msa0234320:intron | 30.0% |
| TATATTTGATCTGGCACAAT+AGG | + | chr2_2:7052361-7052380 | Msa0234320:intron | 30.0% | |
| AAATCCTCTATAGTCATTCT+CGG | - | chr2_2:7052477-7052496 | None:intergenic | 30.0% | |
| ! | TTTTATCTGCAGAAATGTGT+GGG | + | chr2_2:7052597-7052616 | Msa0234320:intron | 30.0% |
| ! | TCTAGAGTTACTGTCATTAA+TGG | + | chr2_2:7052693-7052712 | Msa0234320:CDS | 30.0% |
| CTAGAGTTACTGTCATTAAT+GGG | + | chr2_2:7052694-7052713 | Msa0234320:CDS | 30.0% | |
| CACTGGTAACCTTAAAAATA+AGG | - | chr2_2:7052813-7052832 | None:intergenic | 30.0% | |
| ATAAAGAGGTCAGAAATGAA+GGG | - | chr2_2:7052999-7053018 | None:intergenic | 30.0% | |
| AATAAAGAGGTCAGAAATGA+AGG | - | chr2_2:7053000-7053019 | None:intergenic | 30.0% | |
| TTTGGTAGGTTACAATAAAG+AGG | - | chr2_2:7053013-7053032 | None:intergenic | 30.0% | |
| ATCAGTTGTCATCTTCTTTA+CGG | - | chr2_2:7053198-7053217 | None:intergenic | 30.0% | |
| !! | ATATGTTGAAGCTGTTTCTA+AGG | + | chr2_2:7053368-7053387 | Msa0234320:CDS | 30.0% |
| ATGGGAAAATATGTTCTTGA+AGG | + | chr2_2:7053445-7053464 | Msa0234320:three_prime_UTR | 30.0% | |
| GAAAATATGTTCTTGAAGGA+GGG | + | chr2_2:7053449-7053468 | Msa0234320:three_prime_UTR | 30.0% | |
| AAAATATGTTCTTGAAGGAG+GGG | + | chr2_2:7053450-7053469 | Msa0234320:three_prime_UTR | 30.0% | |
| ! | TAATATCTGGGACAAACATT+GGG | + | chr2_2:7053473-7053492 | Msa0234320:three_prime_UTR | 30.0% |
| ! | ATGATTTTGCTGGATTTTGC+TGG | - | chr2_2:7048863-7048882 | None:intergenic | 35.0% |
| TCATGAAAGGAACAACTTTG+TGG | + | chr2_2:7048993-7049012 | Msa0234320:five_prime_UTR | 35.0% | |
| !! | CTTCTGGTTTAGATTTGAAG+TGG | + | chr2_2:7049079-7049098 | Msa0234320:intron | 35.0% |
| !! | TTAATTGCAGAGCGTTTTTC+CGG | + | chr2_2:7049152-7049171 | Msa0234320:five_prime_UTR | 35.0% |
| !!! | GGATTTTGATTTGCAGGTTT+TGG | + | chr2_2:7049176-7049195 | Msa0234320:intron | 35.0% |
| TTTCTGCAAAATGAGGAAGA+TGG | + | chr2_2:7049333-7049352 | Msa0234320:intron | 35.0% | |
| ACTCTTTCTCTAACCATCAA+AGG | - | chr2_2:7049374-7049393 | None:intergenic | 35.0% | |
| ! | TTGATGGTTAGAGAAAGAGT+TGG | + | chr2_2:7049374-7049393 | Msa0234320:intron | 35.0% |
| ! | CACTCTAACGTTTTACTTCA+TGG | - | chr2_2:7049694-7049713 | None:intergenic | 35.0% |
| AACGTTAGAGTGATACCATT+TGG | + | chr2_2:7049702-7049721 | Msa0234320:intron | 35.0% | |
| CTATCATCCATGTACTACTT+AGG | + | chr2_2:7049983-7050002 | Msa0234320:five_prime_UTR | 35.0% | |
| ATCTGTTCCTAAGTAGTACA+TGG | - | chr2_2:7049993-7050012 | None:intergenic | 35.0% | |
| ACAATAGCGCATGAAATTCT+TGG | - | chr2_2:7050120-7050139 | None:intergenic | 35.0% | |
| ! | GTTTTGCTGAAACAAATCCA+TGG | + | chr2_2:7050247-7050266 | Msa0234320:exon | 35.0% |
| TAACCAGTTCTTTCTAATGC+AGG | + | chr2_2:7050349-7050368 | Msa0234320:intron | 35.0% | |
| TTTCCTGCATTAGAAAGAAC+TGG | - | chr2_2:7050355-7050374 | None:intergenic | 35.0% | |
| ! | AAGTATGCACATGATTTTGC+TGG | + | chr2_2:7050492-7050511 | Msa0234320:CDS | 35.0% |
| ! | CATGATTTTGCTGGATAATC+AGG | + | chr2_2:7050501-7050520 | Msa0234320:CDS | 35.0% |
| ! | GGAATATGTAAGAGTGTGAA+AGG | + | chr2_2:7050609-7050628 | Msa0234320:intron | 35.0% |
| AAAAAGAGACAAAGACAGCA+AGG | - | chr2_2:7051125-7051144 | None:intergenic | 35.0% | |
| AATCATTCAAACCACAGCTT+TGG | - | chr2_2:7051334-7051353 | None:intergenic | 35.0% | |
| TTTAAGGATCAGTTTGAGGA+AGG | + | chr2_2:7051574-7051593 | Msa0234320:CDS | 35.0% | |
| TTAAGGATCAGTTTGAGGAA+GGG | + | chr2_2:7051575-7051594 | Msa0234320:CDS | 35.0% | |
| !! | TACCACTATTTTCAAGCTCA+AGG | + | chr2_2:7051690-7051709 | Msa0234320:CDS | 35.0% |
| ATCCTTGAGCTTGAAAATAG+TGG | - | chr2_2:7051695-7051714 | None:intergenic | 35.0% | |
| ATGTCTCTTAGGGATTTCAT+TGG | - | chr2_2:7051719-7051738 | None:intergenic | 35.0% | |
| CATGTCTTTCCTTGAAATCA+TGG | + | chr2_2:7051747-7051766 | Msa0234320:CDS | 35.0% | |
| GTCAGTGCTTTAGTAATTAC+AGG | - | chr2_2:7051856-7051875 | None:intergenic | 35.0% | |
| CTGAAAGTGACTGAGAAAAA+TGG | + | chr2_2:7051925-7051944 | Msa0234320:CDS | 35.0% | |
| GGAACAATTGAAACGTTTCT+TGG | + | chr2_2:7052105-7052124 | Msa0234320:CDS | 35.0% | |
| !! | TGCAAGCTTAAGAAGTACTT+TGG | + | chr2_2:7052172-7052191 | Msa0234320:CDS | 35.0% |
| !! | TAAGAAGTACTTTGGTGCAA+TGG | + | chr2_2:7052180-7052199 | Msa0234320:CDS | 35.0% |
| !! | AAGAAGTACTTTGGTGCAAT+GGG | + | chr2_2:7052181-7052200 | Msa0234320:CDS | 35.0% |
| ! | GGGATTTCAAATGCCTTTTA+TGG | + | chr2_2:7052202-7052221 | Msa0234320:CDS | 35.0% |
| !! | CAACAGCTTTGTTCCATAAA+AGG | - | chr2_2:7052218-7052237 | None:intergenic | 35.0% |
| CAAGTAGTTAGTCAAATGTC+TGG | + | chr2_2:7052411-7052430 | Msa0234320:CDS | 35.0% | |
| ! | CTTTTATCTGCAGAAATGTG+TGG | + | chr2_2:7052596-7052615 | Msa0234320:intron | 35.0% |
| ! | AGTAACTCTAGAAGCACATT+TGG | - | chr2_2:7052685-7052704 | None:intergenic | 35.0% |
| CAGTAAATTATATCTCGCCT+TGG | - | chr2_2:7052762-7052781 | None:intergenic | 35.0% | |
| GACATGAAGATAAGATACAC+TGG | - | chr2_2:7052830-7052849 | None:intergenic | 35.0% | |
| TAAAGAGGTCAGAAATGAAG+GGG | - | chr2_2:7052998-7053017 | None:intergenic | 35.0% | |
| ACAAATAGGTTCAGTTCTTC+AGG | - | chr2_2:7053107-7053126 | None:intergenic | 35.0% | |
| ! | TGAACCTATTTGTTGACAAG+AGG | + | chr2_2:7053114-7053133 | Msa0234320:CDS | 35.0% |
| ACATCCTCTTGTCAACAAAT+AGG | - | chr2_2:7053121-7053140 | None:intergenic | 35.0% | |
| ! | GAGGATGTTGTTTAAAGTTG+AGG | + | chr2_2:7053133-7053152 | Msa0234320:CDS | 35.0% |
| AATCAAATCTGTATCGCAAC+TGG | + | chr2_2:7053162-7053181 | Msa0234320:CDS | 35.0% | |
| AGGAATATTGACCACAACTT+AGG | + | chr2_2:7053388-7053407 | Msa0234320:exon | 35.0% | |
| ACGCTTGGTTATAACAAAGA+TGG | + | chr2_2:7053426-7053445 | Msa0234320:three_prime_UTR | 35.0% | |
| CGCTTGGTTATAACAAAGAT+GGG | + | chr2_2:7053427-7053446 | Msa0234320:three_prime_UTR | 35.0% | |
| GGAAAATATGTTCTTGAAGG+AGG | + | chr2_2:7053448-7053467 | Msa0234320:three_prime_UTR | 35.0% | |
| ! | GTAATATCTGGGACAAACAT+TGG | + | chr2_2:7053472-7053491 | Msa0234320:three_prime_UTR | 35.0% |
| TGAAAAAAGAAGAAGCTGCG+AGG | - | chr2_2:7048812-7048831 | None:intergenic | 40.0% | |
| GAAATACAAAGTATGGTGGC+CGG | - | chr2_2:7049057-7049076 | None:intergenic | 40.0% | |
| AAAACGCTCTGCAATTAACG+CGG | - | chr2_2:7049150-7049169 | None:intergenic | 40.0% | |
| ACCTGCAAATCAAAATCCTC+CGG | - | chr2_2:7049174-7049193 | None:intergenic | 40.0% | |
| ! | TCTGGGTTTTCTGCAAAATG+AGG | + | chr2_2:7049326-7049345 | Msa0234320:intron | 40.0% |
| CAAAATGAGGAAGATGGTGA+TGG | + | chr2_2:7049339-7049358 | Msa0234320:intron | 40.0% | |
| !! | ATGGTGTTGATTGCCTTTGA+TGG | + | chr2_2:7049358-7049377 | Msa0234320:intron | 40.0% |
| AAAAGCAAGGAAAGGAGGTA+TGG | - | chr2_2:7049772-7049791 | None:intergenic | 40.0% | |
| !! | TACCTCCTTTCCTTGCTTTT+AGG | + | chr2_2:7049772-7049791 | Msa0234320:intron | 40.0% |
| ATCCTAAAAGCAAGGAAAGG+AGG | - | chr2_2:7049777-7049796 | None:intergenic | 40.0% | |
| ATATGCATAGGAACAGATGC+AGG | + | chr2_2:7049832-7049851 | Msa0234320:intron | 40.0% | |
| TCTGTTCCTAAGCAGTACAT+GGG | - | chr2_2:7049930-7049949 | None:intergenic | 40.0% | |
| ATCTGTTCCTAAGCAGTACA+TGG | - | chr2_2:7049931-7049950 | None:intergenic | 40.0% | |
| TACTACTTAGGAACAGATGC+AGG | + | chr2_2:7049995-7050014 | Msa0234320:five_prime_UTR | 40.0% | |
| AATTCTTGGAGGTTGAGTAC+AGG | - | chr2_2:7050106-7050125 | None:intergenic | 40.0% | |
| ATAGCGCATGAAATTCTTGG+AGG | - | chr2_2:7050117-7050136 | None:intergenic | 40.0% | |
| TGACCAAAAGCTACAAATGG+TGG | - | chr2_2:7050190-7050209 | None:intergenic | 40.0% | |
| GCATGACCAAAAGCTACAAA+TGG | - | chr2_2:7050193-7050212 | None:intergenic | 40.0% | |
| AACAAATCCATGGCATCCAA+AGG | + | chr2_2:7050257-7050276 | Msa0234320:exon | 40.0% | |
| AAACAAACCTTTGGATGCCA+TGG | - | chr2_2:7050267-7050286 | None:intergenic | 40.0% | |
| ACCAAGTTTGCAGACATTGT+TGG | + | chr2_2:7050388-7050407 | Msa0234320:CDS | 40.0% | |
| ACCAACAATGTCTGCAAACT+TGG | - | chr2_2:7050392-7050411 | None:intergenic | 40.0% | |
| AAGTTTGCAGACATTGTTGG+TGG | + | chr2_2:7050391-7050410 | Msa0234320:CDS | 40.0% | |
| ! | AAAGATTGATAACCCTACCC+TGG | - | chr2_2:7050435-7050454 | None:intergenic | 40.0% |
| AGGGTAGGGTTATCAATCTT+TGG | + | chr2_2:7050434-7050453 | Msa0234320:CDS | 40.0% | |
| TACCTTACACATGCTGATCA+GGG | + | chr2_2:7050650-7050669 | Msa0234320:intron | 40.0% | |
| ! | TGGGGAGTAGTCTTAAATGT+TGG | - | chr2_2:7051643-7051662 | None:intergenic | 40.0% |
| ATGACCAATGACATCTGTCA+AGG | - | chr2_2:7051887-7051906 | None:intergenic | 40.0% | |
| GAAAAATGGGAAGACCAACA+AGG | + | chr2_2:7051939-7051958 | Msa0234320:CDS | 40.0% | |
| TCTTATGTGTGTTGTGTTGC+AGG | + | chr2_2:7052044-7052063 | Msa0234320:intron | 40.0% | |
| CTTATGTGTGTTGTGTTGCA+GGG | + | chr2_2:7052045-7052064 | Msa0234320:intron | 40.0% | |
| TTATGTGTGTTGTGTTGCAG+GGG | + | chr2_2:7052046-7052065 | Msa0234320:intron | 40.0% | |
| ATCGAATTCACTGCACTCTT+TGG | + | chr2_2:7052071-7052090 | Msa0234320:CDS | 40.0% | |
| TCGAATTCACTGCACTCTTT+GGG | + | chr2_2:7052072-7052091 | Msa0234320:CDS | 40.0% | |
| TCTGAATGAGCACAACAACA+GGG | - | chr2_2:7052150-7052169 | None:intergenic | 40.0% | |
| ATCTGAATGAGCACAACAAC+AGG | - | chr2_2:7052151-7052170 | None:intergenic | 40.0% | |
| !! | AGAAGTACTTTGGTGCAATG+GGG | + | chr2_2:7052182-7052201 | Msa0234320:CDS | 40.0% |
| GTTTGATGTTGAGATACCTG+AGG | + | chr2_2:7052237-7052256 | Msa0234320:CDS | 40.0% | |
| TAGGATGAATGAAGCACATG+TGG | + | chr2_2:7052380-7052399 | Msa0234320:intron | 40.0% | |
| ! | TGGTCCTATTGTTGTTCCTT+TGG | + | chr2_2:7052431-7052450 | Msa0234320:CDS | 40.0% |
| TCAGCCAAAGGAACAACAAT+AGG | - | chr2_2:7052438-7052457 | None:intergenic | 40.0% | |
| GGATTTGATTGAATCCTCTG+AGG | + | chr2_2:7052491-7052510 | Msa0234320:CDS | 40.0% | |
| AAAAAAACCACAGACCTCAG+AGG | - | chr2_2:7052508-7052527 | None:intergenic | 40.0% | |
| TCACAAACTTGGGAAGCTTA+TGG | - | chr2_2:7052570-7052589 | None:intergenic | 40.0% | |
| TAAGCTTCCCAAGTTTGTGA+TGG | + | chr2_2:7052570-7052589 | Msa0234320:intron | 40.0% | |
| AAAGCGACCATCACAAACTT+GGG | - | chr2_2:7052580-7052599 | None:intergenic | 40.0% | |
| AAAAGCGACCATCACAAACT+TGG | - | chr2_2:7052581-7052600 | None:intergenic | 40.0% | |
| ! | GAAATGTGTGGGAACTGTTT+TGG | + | chr2_2:7052608-7052627 | Msa0234320:intron | 40.0% |
| TCTTCATGTCTCTTATGACC+AGG | + | chr2_2:7052840-7052859 | Msa0234320:intron | 40.0% | |
| TTGAATGTGAACCTTGAACC+TGG | - | chr2_2:7052861-7052880 | None:intergenic | 40.0% | |
| TTTGATCGCATTGTTGCACA+AGG | + | chr2_2:7052917-7052936 | Msa0234320:CDS | 40.0% | |
| AAAGAGGTCAGAAATGAAGG+GGG | - | chr2_2:7052997-7053016 | None:intergenic | 40.0% | |
| ATTTACCAATGTCTCAGCCT+GGG | + | chr2_2:7053325-7053344 | Msa0234320:intron | 40.0% | |
| CACAACTTAGGTTTGTGCAA+CGG | + | chr2_2:7053400-7053419 | Msa0234320:three_prime_UTR | 40.0% | |
| TTGAAGGAGGGGTAATATCT+GGG | + | chr2_2:7053461-7053480 | Msa0234320:three_prime_UTR | 40.0% | |
| TCAAATCGACGCCGAGAATA+GGG | - | chr2_2:7048893-7048912 | None:intergenic | 45.0% | |
| ! | TTTTCTTCATCCTCTCGACG+AGG | + | chr2_2:7048947-7048966 | Msa0234320:five_prime_UTR | 45.0% |
| TTTCTTCATCCTCTCGACGA+GGG | + | chr2_2:7048948-7048967 | Msa0234320:five_prime_UTR | 45.0% | |
| !!! | TCCGGAGGATTTTGATTTGC+AGG | + | chr2_2:7049170-7049189 | Msa0234320:five_prime_UTR | 45.0% |
| CATAGAAACAAATGCAGGCG+TGG | + | chr2_2:7049876-7049895 | Msa0234320:intron | 45.0% | |
| CTATCACCCATGTACTGCTT+AGG | + | chr2_2:7049921-7049940 | Msa0234320:intron | 45.0% | |
| TACTGCTTAGGAACAGATGC+AGG | + | chr2_2:7049933-7049952 | Msa0234320:intron | 45.0% | |
| TGAGTACAGGAATGGTTGAC+AGG | - | chr2_2:7050093-7050112 | None:intergenic | 45.0% | |
| TTGGAGGTTGAGTACAGGAA+TGG | - | chr2_2:7050101-7050120 | None:intergenic | 45.0% | |
| ! | AGGCCACCATTTGTAGCTTT+TGG | + | chr2_2:7050184-7050203 | Msa0234320:five_prime_UTR | 45.0% |
| ! | TCTGCAAACTTGGTGAGCTT+TGG | - | chr2_2:7050382-7050401 | None:intergenic | 45.0% |
| ! | TTGCAGACATTGTTGGTGGA+AGG | + | chr2_2:7050395-7050414 | Msa0234320:CDS | 45.0% |
| ! | AAGGATTGACTTCCAGATCC+AGG | + | chr2_2:7050414-7050433 | Msa0234320:CDS | 45.0% |
| ! | AGGATTGACTTCCAGATCCA+GGG | + | chr2_2:7050415-7050434 | Msa0234320:CDS | 45.0% |
| CTACCTTACACATGCTGATC+AGG | + | chr2_2:7050649-7050668 | Msa0234320:intron | 45.0% | |
| ACCTTACACATGCTGATCAG+GGG | + | chr2_2:7050651-7050670 | Msa0234320:intron | 45.0% | |
| ! | ACATGCTGATCAGGGGTATA+AGG | + | chr2_2:7050658-7050677 | Msa0234320:intron | 45.0% |
| TGACAATCCATGCAAGTGTC+AGG | + | chr2_2:7051533-7051552 | Msa0234320:CDS | 45.0% | |
| AATGCTTCCTGACACTTGCA+TGG | - | chr2_2:7051543-7051562 | None:intergenic | 45.0% | |
| !! | TGCAAGTGTCAGGAAGCATT+TGG | + | chr2_2:7051543-7051562 | Msa0234320:CDS | 45.0% |
| AATTCACTGCACTCTTTGGG+AGG | + | chr2_2:7052075-7052094 | Msa0234320:CDS | 45.0% | |
| ! | AGCACAACAACAGGGAGTTT+TGG | - | chr2_2:7052142-7052161 | None:intergenic | 45.0% |
| ACCTGAGGTTGCAAGCTATT+TGG | + | chr2_2:7052252-7052271 | Msa0234320:CDS | 45.0% | |
| ! | TCCAAATAGCTTGCAACCTC+AGG | - | chr2_2:7052256-7052275 | None:intergenic | 45.0% |
| CAGAGTAAGTCATCAGCCAA+AGG | - | chr2_2:7052450-7052469 | None:intergenic | 45.0% | |
| TACGCCGAGAATGACTATAG+AGG | + | chr2_2:7052470-7052489 | Msa0234320:CDS | 45.0% | |
| !! | ATTGAATCCTCTGAGGTCTG+TGG | + | chr2_2:7052498-7052517 | Msa0234320:intron | 45.0% |
| TGTGAGCTTGAGTCTGATGT+TGG | + | chr2_2:7052639-7052658 | Msa0234320:CDS | 45.0% | |
| GTGAGCTTGAGTCTGATGTT+GGG | + | chr2_2:7052640-7052659 | Msa0234320:CDS | 45.0% | |
| GTCTCTTATGACCAGGTTCA+AGG | + | chr2_2:7052847-7052866 | Msa0234320:intron | 45.0% | |
| TCGCATTGTTGCACAAGGTT+TGG | + | chr2_2:7052922-7052941 | Msa0234320:CDS | 45.0% | |
| CGCATTGTTGCACAAGGTTT+GGG | + | chr2_2:7052923-7052942 | Msa0234320:CDS | 45.0% | |
| TTGTTGCACAAGGTTTGGGA+CGG | + | chr2_2:7052927-7052946 | Msa0234320:CDS | 45.0% | |
| !! | GAAAAAGAGCACCTCAGCAA+TGG | - | chr2_2:7052975-7052994 | None:intergenic | 45.0% |
| ACGCGATTCATTTCGCATCA+TGG | + | chr2_2:7053230-7053249 | Msa0234320:CDS | 45.0% | |
| CATTTACCAATGTCTCAGCC+TGG | + | chr2_2:7053324-7053343 | Msa0234320:intron | 45.0% | |
| CGTTGCACAAACCTAAGTTG+TGG | - | chr2_2:7053402-7053421 | None:intergenic | 45.0% | |
| CTTGAAGGAGGGGTAATATC+TGG | + | chr2_2:7053460-7053479 | Msa0234320:three_prime_UTR | 45.0% | |
| TGGGACAAACATTGGGCAAA+AGG | + | chr2_2:7053480-7053499 | Msa0234320:three_prime_UTR | 45.0% | |
| GGCAAAAGGTTTATATCCCC+AGG | + | chr2_2:7053494-7053513 | Msa0234320:three_prime_UTR | 45.0% | |
| !! | ATTATTAAAAAAAAATATGA+TGG | + | chr2_2:7051149-7051168 | Msa0234320:intron | 5.0% |
| TCATACGCCCACCCTATTCT+CGG | + | chr2_2:7048879-7048898 | Msa0234320:five_prime_UTR | 50.0% | |
| GTCAAATCGACGCCGAGAAT+AGG | - | chr2_2:7048894-7048913 | None:intergenic | 50.0% | |
| ! | CTTTTTCCGATCGGTGCATG+TGG | - | chr2_2:7048919-7048938 | None:intergenic | 50.0% |
| !! | ATTGCAGAGCGTTTTTCCGG+AGG | + | chr2_2:7049155-7049174 | Msa0234320:five_prime_UTR | 50.0% |
| CATAGGAACAGATGCAGGCA+TGG | + | chr2_2:7049837-7049856 | Msa0234320:intron | 50.0% | |
| TTGACTTCCAGATCCAGGGT+AGG | + | chr2_2:7050419-7050438 | Msa0234320:CDS | 50.0% | |
| TGACTTCCAGATCCAGGGTA+GGG | + | chr2_2:7050420-7050439 | Msa0234320:CDS | 50.0% | |
| TGATAACCCTACCCTGGATC+TGG | - | chr2_2:7050429-7050448 | None:intergenic | 50.0% | |
| CAGCTTCAGCTGCGTTGAAA+CGG | - | chr2_2:7050471-7050490 | None:intergenic | 50.0% | |
| ACCCCTGATCAGCATGTGTA+AGG | - | chr2_2:7050655-7050674 | None:intergenic | 50.0% | |
| GCACATGGGGTAGCAAGAAA+AGG | + | chr2_2:7050984-7051003 | Msa0234320:intron | 50.0% | |
| TGTGGCAGGCCATGATTTCA+AGG | - | chr2_2:7051759-7051778 | None:intergenic | 50.0% | |
| TGAAATCATGGCCTGCCACA+AGG | + | chr2_2:7051759-7051778 | Msa0234320:CDS | 50.0% | |
| CTATCAAGCGATCCTCCTTG+TGG | - | chr2_2:7051777-7051796 | None:intergenic | 50.0% | |
| CACAAGGAGGATCGCTTGAT+AGG | + | chr2_2:7051775-7051794 | Msa0234320:CDS | 50.0% | |
| CAATGACATCTGTCAAGGCG+AGG | - | chr2_2:7051882-7051901 | None:intergenic | 50.0% | |
| CTCGCCTTGACAGATGTCAT+TGG | + | chr2_2:7051880-7051899 | Msa0234320:intron | 50.0% | |
| TGGGAAGACCAACAAGGTGA+TGG | + | chr2_2:7051945-7051964 | Msa0234320:CDS | 50.0% | |
| TGTCGCATCCATCACCTTGT+TGG | - | chr2_2:7051956-7051975 | None:intergenic | 50.0% | |
| !! | CAAGGTGATGGATGCGACAT+TGG | + | chr2_2:7051957-7051976 | Msa0234320:CDS | 50.0% |
| GGATGCGACATTGGAGGATT+TGG | + | chr2_2:7051966-7051985 | Msa0234320:CDS | 50.0% | |
| ! | CACTCTTTGGGAGGACTATG+CGG | + | chr2_2:7052084-7052103 | Msa0234320:CDS | 50.0% |
| AGCTTGAGTCTGATGTTGGG+TGG | + | chr2_2:7052643-7052662 | Msa0234320:CDS | 50.0% | |
| GTGATAAGTGCAGCATGCCT+CGG | + | chr2_2:7052727-7052746 | Msa0234320:CDS | 50.0% | |
| TATATCTCGCCTTGGCACAG+CGG | - | chr2_2:7052754-7052773 | None:intergenic | 50.0% | |
| ! | CTTGGTTGATGCCATTGCTG+AGG | + | chr2_2:7052961-7052980 | Msa0234320:CDS | 50.0% |
| TGATTCCCAGGCTGAGACAT+TGG | - | chr2_2:7053333-7053352 | None:intergenic | 50.0% | |
| TTTGTGCAACGGAACACGCT+TGG | + | chr2_2:7053411-7053430 | Msa0234320:three_prime_UTR | 50.0% | |
| ! | GGGTGGGCGTATGATTTTGC+TGG | - | chr2_2:7048873-7048892 | None:intergenic | 55.0% |
| ATCGACGCCGAGAATAGGGT+GGG | - | chr2_2:7048889-7048908 | None:intergenic | 55.0% | |
| AATCGACGCCGAGAATAGGG+TGG | - | chr2_2:7048890-7048909 | None:intergenic | 55.0% | |
| ! | TGACCACCACATGCACCGAT+CGG | + | chr2_2:7048910-7048929 | Msa0234320:five_prime_UTR | 55.0% |
| TTTCCGATCGGTGCATGTGG+TGG | - | chr2_2:7048916-7048935 | None:intergenic | 55.0% | |
| AATGGAAAGCCCTCGTCGAG+AGG | - | chr2_2:7048960-7048979 | None:intergenic | 55.0% | |
| TCTCGACGAGGGCTTTCCAT+TGG | + | chr2_2:7048959-7048978 | Msa0234320:five_prime_UTR | 55.0% | |
| TCAGCTGCGTTGAAACGGTC+AGG | - | chr2_2:7050466-7050485 | None:intergenic | 55.0% | |
| CGTTTCAACGCAGCTGAAGC+TGG | + | chr2_2:7050469-7050488 | Msa0234320:CDS | 55.0% | |
| AATCATGGCCTGCCACAAGG+AGG | + | chr2_2:7051762-7051781 | Msa0234320:CDS | 55.0% | |
| !! | GGTGATGGATGCGACATTGG+AGG | + | chr2_2:7051960-7051979 | Msa0234320:CDS | 55.0% |
| GTCTCAGCCTGGGAATCATG+AGG | + | chr2_2:7053335-7053354 | Msa0234320:intron | 55.0% | |
| GCCTGGGAATCATGAGGAAG+AGG | + | chr2_2:7053341-7053360 | Msa0234320:intron | 55.0% | |
| GCCTCTTCCTCATGATTCCC+AGG | - | chr2_2:7053345-7053364 | None:intergenic | 55.0% | |
| ! | ACCCTTTTCTTCCTCCGCCG+CGG | + | chr2_2:7049019-7049038 | Msa0234320:five_prime_UTR | 60.0% |
| ACCGCGGCGGAGGAAGAAAA+GGG | - | chr2_2:7049023-7049042 | None:intergenic | 60.0% | |
| TACCGCGGCGGAGGAAGAAA+AGG | - | chr2_2:7049024-7049043 | None:intergenic | 60.0% | |
| TTTCTTCCTCCGCCGCGGTA+AGG | + | chr2_2:7049024-7049043 | Msa0234320:intron | 60.0% | |
| TTCTTCCTCCGCCGCGGTAA+GGG | + | chr2_2:7049025-7049044 | Msa0234320:intron | 60.0% | |
| CAAGCGATCCTCCTTGTGGC+AGG | - | chr2_2:7051773-7051792 | None:intergenic | 60.0% | |
| TCTTCCTCCGCCGCGGTAAG+GGG | + | chr2_2:7049026-7049045 | Msa0234320:intron | 65.0% | |
| GGAAAAGCCCCTTACCGCGG+CGG | - | chr2_2:7049036-7049055 | None:intergenic | 65.0% | |
| ! | GCCGCGGTAAGGGGCTTTTC+CGG | + | chr2_2:7049035-7049054 | Msa0234320:intron | 65.0% |
| GCCGGAAAAGCCCCTTACCG+CGG | - | chr2_2:7049039-7049058 | None:intergenic | 65.0% | |
| ! | AGGTTTGGGACGGTCTGCGC+AGG | + | chr2_2:7052937-7052956 | Msa0234320:CDS | 65.0% |
| AAAGCCCCTTACCGCGGCGG+AGG | - | chr2_2:7049033-7049052 | None:intergenic | 70.0% | |
| TGCCTCGGACCGCTGTGCCA+AGG | + | chr2_2:7052742-7052761 | Msa0234320:CDS | 70.0% | |
| GGGACGGTCTGCGCAGGACT+TGG | + | chr2_2:7052943-7052962 | Msa0234320:CDS | 70.0% | |
| CGCCTTGGCACAGCGGTCCG+AGG | - | chr2_2:7052747-7052766 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 7048801 | 7053526 | 7048801 | ID=Msa0234320;Name=Msa0234320 |
| chr2_2 | mRNA | 7048801 | 7053526 | 7048801 | ID=Msa0234320-mRNA-1;Parent=Msa0234320;Name=Msa0234320-mRNA-1;_AED=0.12;_eAED=0.12;_QI=528|1|1|1|0.75|0.69|13|128|460 |
| chr2_2 | exon | 7048801 | 7049040 | 7048801 | ID=Msa0234320-mRNA-1:exon:3028;Parent=Msa0234320-mRNA-1 |
| chr2_2 | exon | 7049125 | 7049191 | 7049125 | ID=Msa0234320-mRNA-1:exon:3029;Parent=Msa0234320-mRNA-1 |
| chr2_2 | exon | 7049943 | 7050057 | 7049943 | ID=Msa0234320-mRNA-1:exon:3030;Parent=Msa0234320-mRNA-1 |
| chr2_2 | exon | 7050160 | 7050278 | 7050160 | ID=Msa0234320-mRNA-1:exon:3031;Parent=Msa0234320-mRNA-1 |
| chr2_2 | exon | 7050371 | 7050522 | 7050371 | ID=Msa0234320-mRNA-1:exon:3032;Parent=Msa0234320-mRNA-1 |
| chr2_2 | exon | 7051529 | 7051796 | 7051529 | ID=Msa0234320-mRNA-1:exon:3033;Parent=Msa0234320-mRNA-1 |
| chr2_2 | exon | 7051893 | 7051989 | 7051893 | ID=Msa0234320-mRNA-1:exon:3034;Parent=Msa0234320-mRNA-1 |
| chr2_2 | exon | 7052066 | 7052278 | 7052066 | ID=Msa0234320-mRNA-1:exon:3035;Parent=Msa0234320-mRNA-1 |
| chr2_2 | exon | 7052383 | 7052512 | 7052383 | ID=Msa0234320-mRNA-1:exon:3036;Parent=Msa0234320-mRNA-1 |
| chr2_2 | exon | 7052609 | 7052763 | 7052609 | ID=Msa0234320-mRNA-1:exon:3037;Parent=Msa0234320-mRNA-1 |
| chr2_2 | exon | 7052862 | 7052982 | 7052862 | ID=Msa0234320-mRNA-1:exon:3038;Parent=Msa0234320-mRNA-1 |
| chr2_2 | exon | 7053083 | 7053259 | 7053083 | ID=Msa0234320-mRNA-1:exon:3039;Parent=Msa0234320-mRNA-1 |
| chr2_2 | exon | 7053342 | 7053526 | 7053342 | ID=Msa0234320-mRNA-1:exon:3040;Parent=Msa0234320-mRNA-1 |
| chr2_2 | five_prime_UTR | 7048801 | 7049040 | 7048801 | ID=Msa0234320-mRNA-1:five_prime_utr;Parent=Msa0234320-mRNA-1 |
| chr2_2 | five_prime_UTR | 7049125 | 7049191 | 7049125 | ID=Msa0234320-mRNA-1:five_prime_utr;Parent=Msa0234320-mRNA-1 |
| chr2_2 | five_prime_UTR | 7049943 | 7050057 | 7049943 | ID=Msa0234320-mRNA-1:five_prime_utr;Parent=Msa0234320-mRNA-1 |
| chr2_2 | five_prime_UTR | 7050160 | 7050265 | 7050160 | ID=Msa0234320-mRNA-1:five_prime_utr;Parent=Msa0234320-mRNA-1 |
| chr2_2 | CDS | 7050266 | 7050278 | 7050266 | ID=Msa0234320-mRNA-1:cds;Parent=Msa0234320-mRNA-1 |
| chr2_2 | CDS | 7050371 | 7050522 | 7050371 | ID=Msa0234320-mRNA-1:cds;Parent=Msa0234320-mRNA-1 |
| chr2_2 | CDS | 7051529 | 7051796 | 7051529 | ID=Msa0234320-mRNA-1:cds;Parent=Msa0234320-mRNA-1 |
| chr2_2 | CDS | 7051893 | 7051989 | 7051893 | ID=Msa0234320-mRNA-1:cds;Parent=Msa0234320-mRNA-1 |
| chr2_2 | CDS | 7052066 | 7052278 | 7052066 | ID=Msa0234320-mRNA-1:cds;Parent=Msa0234320-mRNA-1 |
| chr2_2 | CDS | 7052383 | 7052512 | 7052383 | ID=Msa0234320-mRNA-1:cds;Parent=Msa0234320-mRNA-1 |
| chr2_2 | CDS | 7052609 | 7052763 | 7052609 | ID=Msa0234320-mRNA-1:cds;Parent=Msa0234320-mRNA-1 |
| chr2_2 | CDS | 7052862 | 7052982 | 7052862 | ID=Msa0234320-mRNA-1:cds;Parent=Msa0234320-mRNA-1 |
| chr2_2 | CDS | 7053083 | 7053259 | 7053083 | ID=Msa0234320-mRNA-1:cds;Parent=Msa0234320-mRNA-1 |
| chr2_2 | CDS | 7053342 | 7053398 | 7053342 | ID=Msa0234320-mRNA-1:cds;Parent=Msa0234320-mRNA-1 |
| chr2_2 | three_prime_UTR | 7053399 | 7053526 | 7053399 | ID=Msa0234320-mRNA-1:three_prime_utr;Parent=Msa0234320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
