Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970040 | XP_013450691.1 | 99.020 | 510 | 5 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1042 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970040 | sp|Q42806|KPYC_SOYBN | 92.564 | 511 | 37 | 1 | 1 | 510 | 1 | 511 | 0.0 | 980 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970040 | A0A072U4Q0 | 99.020 | 510 | 5 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1042 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0970040 | 0.814525 | 1.473914e-51 | -8.615850e-47 |
| Msa0010210 | Msa0970040 | 0.824298 | 8.707502e-54 | -8.615850e-47 |
| Msa0021400 | Msa0970040 | 0.809625 | 1.725246e-50 | -8.615850e-47 |
| Msa0026250 | Msa0970040 | 0.853451 | 2.369493e-61 | -8.615850e-47 |
| Msa0035740 | Msa0970040 | 0.850439 | 1.696414e-60 | -8.615850e-47 |
| Msa0036550 | Msa0970040 | 0.835768 | 1.384376e-56 | -8.615850e-47 |
| Msa0039750 | Msa0970040 | 0.807525 | 4.844860e-50 | -8.615850e-47 |
| Msa0043840 | Msa0970040 | 0.834861 | 2.345744e-56 | -8.615850e-47 |
| Msa0044440 | Msa0970040 | 0.811185 | 7.944334e-51 | -8.615850e-47 |
| Msa0045620 | Msa0970040 | 0.805565 | 1.255411e-49 | -8.615850e-47 |
| Msa0050530 | Msa0970040 | 0.825444 | 4.673319e-54 | -8.615850e-47 |
| Msa0063190 | Msa0970040 | 0.803605 | 3.219328e-49 | -8.615850e-47 |
| Msa0074060 | Msa0970040 | 0.820927 | 5.294433e-53 | -8.615850e-47 |
| Msa0080030 | Msa0970040 | 0.803409 | 3.535029e-49 | -8.615850e-47 |
| Msa0080820 | Msa0970040 | 0.842932 | 1.911357e-58 | -8.615850e-47 |
| Msa0089540 | Msa0970040 | 0.863156 | 3.043192e-64 | -8.615850e-47 |
| Msa0090500 | Msa0970040 | 0.824240 | 8.983700e-54 | -8.615850e-47 |
| Msa0100600 | Msa0970040 | 0.832615 | 8.542511e-56 | -8.615850e-47 |
| Msa0100890 | Msa0970040 | 0.828190 | 1.031981e-54 | -8.615850e-47 |
| Msa0104740 | Msa0970040 | 0.819724 | 9.992048e-53 | -8.615850e-47 |
| Msa0110240 | Msa0970040 | 0.825082 | 5.691447e-54 | -8.615850e-47 |
| Msa0116620 | Msa0970040 | 0.828455 | 8.903134e-55 | -8.615850e-47 |
| Msa0116710 | Msa0970040 | 0.830349 | 3.088369e-55 | -8.615850e-47 |
| Msa0605350 | Msa0970040 | 0.815361 | 9.616050e-52 | -8.615850e-47 |
| Msa0612880 | Msa0970040 | -0.808219 | 3.449180e-50 | -8.615850e-47 |
| Msa0616230 | Msa0970040 | 0.809858 | 1.537148e-50 | -8.615850e-47 |
| Msa0620900 | Msa0970040 | 0.842175 | 3.035954e-58 | -8.615850e-47 |
| Msa0623040 | Msa0970040 | 0.816136 | 6.459171e-52 | -8.615850e-47 |
| Msa0646260 | Msa0970040 | 0.830494 | 2.845107e-55 | -8.615850e-47 |
| Msa0655710 | Msa0970040 | 0.801187 | 1.013373e-48 | -8.615850e-47 |
| Msa0660260 | Msa0970040 | 0.860126 | 2.566700e-63 | -8.615850e-47 |
| Msa0661480 | Msa0970040 | 0.805316 | 1.416057e-49 | -8.615850e-47 |
| Msa0673940 | Msa0970040 | 0.825545 | 4.422972e-54 | -8.615850e-47 |
| Msa0685390 | Msa0970040 | -0.812045 | 5.165289e-51 | -8.615850e-47 |
| Msa0685610 | Msa0970040 | 0.899765 | 1.433140e-77 | -8.615850e-47 |
| Msa0689660 | Msa0970040 | 0.812283 | 4.583220e-51 | -8.615850e-47 |
| Msa0699560 | Msa0970040 | 0.801025 | 1.093944e-48 | -8.615850e-47 |
| Msa0706690 | Msa0970040 | 0.833886 | 4.121739e-56 | -8.615850e-47 |
| Msa0751720 | Msa0970040 | 0.817827 | 2.694929e-52 | -8.615850e-47 |
| Msa0774060 | Msa0970040 | 0.831435 | 1.671629e-55 | -8.615850e-47 |
| Msa0786740 | Msa0970040 | 0.822494 | 2.298323e-53 | -8.615850e-47 |
| Msa0822510 | Msa0970040 | 0.803881 | 2.821344e-49 | -8.615850e-47 |
| Msa0827420 | Msa0970040 | 0.815701 | 8.079381e-52 | -8.615850e-47 |
| Msa0831820 | Msa0970040 | 0.812376 | 4.374324e-51 | -8.615850e-47 |
| Msa0840540 | Msa0970040 | 0.800260 | 1.566569e-48 | -8.615850e-47 |
| Msa0128340 | Msa0970040 | 0.806258 | 8.975198e-50 | -8.615850e-47 |
| Msa0128740 | Msa0970040 | 0.807435 | 5.061391e-50 | -8.615850e-47 |
| Msa0135230 | Msa0970040 | 0.837371 | 5.406276e-57 | -8.615850e-47 |
| Msa0137760 | Msa0970040 | 0.802142 | 6.454032e-49 | -8.615850e-47 |
| Msa0137970 | Msa0970040 | 0.811639 | 6.330857e-51 | -8.615850e-47 |
| Msa0138350 | Msa0970040 | 0.830095 | 3.560634e-55 | -8.615850e-47 |
| Msa0152190 | Msa0970040 | -0.807676 | 4.499800e-50 | -8.615850e-47 |
| Msa0159730 | Msa0970040 | 0.819112 | 1.378027e-52 | -8.615850e-47 |
| Msa0161960 | Msa0970040 | 0.818478 | 1.920134e-52 | -8.615850e-47 |
| Msa0164170 | Msa0970040 | 0.812298 | 4.547644e-51 | -8.615850e-47 |
| Msa0165640 | Msa0970040 | 0.800422 | 1.451804e-48 | -8.615850e-47 |
| Msa0168380 | Msa0970040 | 0.809319 | 2.006356e-50 | -8.615850e-47 |
| Msa0172590 | Msa0970040 | 0.804155 | 2.474727e-49 | -8.615850e-47 |
| Msa0173380 | Msa0970040 | 0.869779 | 2.396732e-66 | -8.615850e-47 |
| Msa0176220 | Msa0970040 | 0.835368 | 1.748198e-56 | -8.615850e-47 |
| Msa0176600 | Msa0970040 | 0.820862 | 5.482393e-53 | -8.615850e-47 |
| Msa0189250 | Msa0970040 | -0.817117 | 3.894608e-52 | -8.615850e-47 |
| Msa0205250 | Msa0970040 | 0.831601 | 1.522056e-55 | -8.615850e-47 |
| Msa0211460 | Msa0970040 | 0.813221 | 2.856104e-51 | -8.615850e-47 |
| Msa0219280 | Msa0970040 | 0.823859 | 1.103918e-53 | -8.615850e-47 |
| Msa0219840 | Msa0970040 | 0.844392 | 7.776214e-59 | -8.615850e-47 |
| Msa0221180 | Msa0970040 | 0.834223 | 3.394174e-56 | -8.615850e-47 |
| Msa0221460 | Msa0970040 | -0.825152 | 5.477313e-54 | -8.615850e-47 |
| Msa0227790 | Msa0970040 | 0.833054 | 6.646776e-56 | -8.615850e-47 |
| Msa0228690 | Msa0970040 | 0.817540 | 3.127033e-52 | -8.615850e-47 |
| Msa0369580 | Msa0970040 | -0.808122 | 3.617157e-50 | -8.615850e-47 |
| Msa0372100 | Msa0970040 | 0.862141 | 6.251816e-64 | -8.615850e-47 |
| Msa0375550 | Msa0970040 | 0.817467 | 3.248521e-52 | -8.615850e-47 |
| Msa0384590 | Msa0970040 | 0.855471 | 6.171542e-62 | -8.615850e-47 |
| Msa0388210 | Msa0970040 | 0.810240 | 1.271718e-50 | -8.615850e-47 |
| Msa0388250 | Msa0970040 | 0.828389 | 9.238651e-55 | -8.615850e-47 |
| Msa0416210 | Msa0970040 | 0.807256 | 5.523650e-50 | -8.615850e-47 |
| Msa0426240 | Msa0970040 | 0.806171 | 9.361392e-50 | -8.615850e-47 |
| Msa0430040 | Msa0970040 | -0.808943 | 2.415819e-50 | -8.615850e-47 |
| Msa0432200 | Msa0970040 | 0.844077 | 9.452631e-59 | -8.615850e-47 |
| Msa0433630 | Msa0970040 | 0.812133 | 4.942336e-51 | -8.615850e-47 |
| Msa0434660 | Msa0970040 | 0.847574 | 1.061044e-59 | -8.615850e-47 |
| Msa0436100 | Msa0970040 | 0.802261 | 6.099912e-49 | -8.615850e-47 |
| Msa0436440 | Msa0970040 | 0.812382 | 4.361617e-51 | -8.615850e-47 |
| Msa0463820 | Msa0970040 | -0.814007 | 1.917975e-51 | -8.615850e-47 |
| Msa0478130 | Msa0970040 | 0.811384 | 7.193503e-51 | -8.615850e-47 |
| Msa0478190 | Msa0970040 | 0.807592 | 4.689349e-50 | -8.615850e-47 |
| Msa0480900 | Msa0970040 | -0.805881 | 1.077490e-49 | -8.615850e-47 |
| Msa0244820 | Msa0970040 | -0.821773 | 3.378977e-53 | -8.615850e-47 |
| Msa0258910 | Msa0970040 | 0.839165 | 1.865208e-57 | -8.615850e-47 |
| Msa0260980 | Msa0970040 | 0.804654 | 1.947709e-49 | -8.615850e-47 |
| Msa0261480 | Msa0970040 | 0.821942 | 3.087863e-53 | -8.615850e-47 |
| Msa0262750 | Msa0970040 | 0.815080 | 1.110187e-51 | -8.615850e-47 |
| Msa0272790 | Msa0970040 | 0.822483 | 2.311967e-53 | -8.615850e-47 |
| Msa0276800 | Msa0970040 | -0.808318 | 3.284739e-50 | -8.615850e-47 |
| Msa0297200 | Msa0970040 | 0.817722 | 2.845043e-52 | -8.615850e-47 |
| Msa0298400 | Msa0970040 | 0.823304 | 1.488441e-53 | -8.615850e-47 |
| Msa0300470 | Msa0970040 | 0.818710 | 1.700595e-52 | -8.615850e-47 |
| Msa0300670 | Msa0970040 | -0.827909 | 1.205639e-54 | -8.615850e-47 |
| Msa0316720 | Msa0970040 | -0.804667 | 1.935143e-49 | -8.615850e-47 |
| Msa0336120 | Msa0970040 | 0.826557 | 2.541459e-54 | -8.615850e-47 |
| Msa0336430 | Msa0970040 | 0.810153 | 1.327996e-50 | -8.615850e-47 |
| Msa0336460 | Msa0970040 | 0.807257 | 5.522154e-50 | -8.615850e-47 |
| Msa0336520 | Msa0970040 | 0.817941 | 2.539055e-52 | -8.615850e-47 |
| Msa0337760 | Msa0970040 | -0.820928 | 5.292923e-53 | -8.615850e-47 |
| Msa0337970 | Msa0970040 | 0.819948 | 8.881858e-53 | -8.615850e-47 |
| Msa0514540 | Msa0970040 | 0.806079 | 9.790998e-50 | -8.615850e-47 |
| Msa0516970 | Msa0970040 | 0.802335 | 5.891662e-49 | -8.615850e-47 |
| Msa0521060 | Msa0970040 | 0.845646 | 3.566309e-59 | -8.615850e-47 |
| Msa0521510 | Msa0970040 | 0.817469 | 3.245437e-52 | -8.615850e-47 |
| Msa0522290 | Msa0970040 | 0.802130 | 6.490462e-49 | -8.615850e-47 |
| Msa0522540 | Msa0970040 | 0.852939 | 3.322228e-61 | -8.615850e-47 |
| Msa0526150 | Msa0970040 | 0.831623 | 1.503215e-55 | -8.615850e-47 |
| Msa0527200 | Msa0970040 | 0.821238 | 4.490826e-53 | -8.615850e-47 |
| Msa0541880 | Msa0970040 | 0.899680 | 1.558927e-77 | -8.615850e-47 |
| Msa0541940 | Msa0970040 | 0.884604 | 1.664232e-71 | -8.615850e-47 |
| Msa0549870 | Msa0970040 | 0.832444 | 9.423096e-56 | -8.615850e-47 |
| Msa0568460 | Msa0970040 | -0.803361 | 3.616443e-49 | -8.615850e-47 |
| Msa0571350 | Msa0970040 | 0.876100 | 1.826513e-68 | -8.615850e-47 |
| Msa0572360 | Msa0970040 | 0.836615 | 8.433322e-57 | -8.615850e-47 |
| Msa0575950 | Msa0970040 | 0.868823 | 4.903898e-66 | -8.615850e-47 |
| Msa0576330 | Msa0970040 | 0.825061 | 5.756958e-54 | -8.615850e-47 |
| Msa0587180 | Msa0970040 | 0.829377 | 5.325928e-55 | -8.615850e-47 |
| Msa0591890 | Msa0970040 | 0.823024 | 1.730721e-53 | -8.615850e-47 |
| Msa0857260 | Msa0970040 | 0.807966 | 3.904914e-50 | -8.615850e-47 |
| Msa0871420 | Msa0970040 | 0.800931 | 1.143283e-48 | -8.615850e-47 |
| Msa0876630 | Msa0970040 | 0.826032 | 3.389045e-54 | -8.615850e-47 |
| Msa0902270 | Msa0970040 | 0.829938 | 3.888838e-55 | -8.615850e-47 |
| Msa0921860 | Msa0970040 | 0.865998 | 3.931998e-65 | -8.615850e-47 |
| Msa0929900 | Msa0970040 | 0.815825 | 7.578809e-52 | -8.615850e-47 |
| Msa0931370 | Msa0970040 | 0.829404 | 5.245986e-55 | -8.615850e-47 |
| Msa0936630 | Msa0970040 | 0.800092 | 1.694628e-48 | -8.615850e-47 |
| Msa0941520 | Msa0970040 | 0.820455 | 6.799185e-53 | -8.615850e-47 |
| Msa0958830 | Msa0970040 | 0.852176 | 5.480814e-61 | -8.615850e-47 |
| Msa0970040 | Msa0970100 | 0.940863 | 1.124260e-100 | -8.615850e-47 |
| Msa0970040 | Msa0978530 | 0.817650 | 2.953657e-52 | -8.615850e-47 |
| Msa0970040 | Msa0978980 | 0.825061 | 5.756752e-54 | -8.615850e-47 |
| Msa0970040 | Msa1021560 | 0.805439 | 1.334508e-49 | -8.615850e-47 |
| Msa0970040 | Msa1026710 | 0.872780 | 2.445035e-67 | -8.615850e-47 |
| Msa0970040 | Msa1027160 | 0.848187 | 7.191526e-60 | -8.615850e-47 |
| Msa0970040 | Msa1038860 | 0.815795 | 7.699235e-52 | -8.615850e-47 |
| Msa0970040 | Msa1042300 | 0.807285 | 5.445550e-50 | -8.615850e-47 |
| Msa0970040 | Msa1057620 | -0.825811 | 3.824420e-54 | -8.615850e-47 |
| Msa0970040 | Msa1065400 | 0.809080 | 2.258162e-50 | -8.615850e-47 |
| Msa0970040 | Msa1083380 | 0.809551 | 1.789171e-50 | -8.615850e-47 |
| Msa0970040 | Msa1085560 | 0.855912 | 4.588208e-62 | -8.615850e-47 |
| Msa0970040 | Msa1085680 | 0.828465 | 8.856227e-55 | -8.615850e-47 |
| Msa0970040 | Msa1111910 | 0.811493 | 6.809925e-51 | -8.615850e-47 |
| Msa0970040 | Msa1130770 | 0.815284 | 1.000334e-51 | -8.615850e-47 |
| Msa0970040 | Msa1134770 | 0.809741 | 1.628681e-50 | -8.615850e-47 |
| Msa0970040 | Msa1144990 | 0.800579 | 1.348867e-48 | -8.615850e-47 |
| Msa0970040 | Msa1146980 | 0.830763 | 2.445148e-55 | -8.615850e-47 |
| Msa0970040 | Msa1154320 | 0.805525 | 1.280129e-49 | -8.615850e-47 |
| Msa0970040 | Msa1154630 | 0.880805 | 4.056675e-70 | -8.615850e-47 |
| Msa0970040 | Msa1183900 | 0.812062 | 5.122356e-51 | -8.615850e-47 |
| Msa0970040 | Msa1184680 | 0.814269 | 1.678742e-51 | -8.615850e-47 |
| Msa0970040 | Msa1188930 | 0.817918 | 2.570279e-52 | -8.615850e-47 |
| Msa0970040 | Msa1190560 | 0.813772 | 2.161488e-51 | -8.615850e-47 |
| Msa0970040 | Msa1190770 | 0.808325 | 3.273178e-50 | -8.615850e-47 |
| Msa0970040 | Msa1197720 | 0.838953 | 2.116867e-57 | -8.615850e-47 |
| Msa0970040 | Msa1200360 | 0.822628 | 2.139564e-53 | -8.615850e-47 |
| Msa0970040 | Msa1231440 | 0.824891 | 6.312631e-54 | -8.615850e-47 |
| Msa0970040 | Msa1245070 | 0.816831 | 4.515186e-52 | -8.615850e-47 |
| Msa0970040 | Msa1251410 | 0.813861 | 2.065630e-51 | -8.615850e-47 |
| Msa0970040 | Msa1253300 | 0.817197 | 3.735489e-52 | -8.615850e-47 |
| Msa0970040 | Msa1278000 | 0.818750 | 1.665036e-52 | -8.615850e-47 |
| Msa0970040 | Msa1278030 | 0.806876 | 6.646936e-50 | -8.615850e-47 |
| Msa0970040 | Msa1283980 | 0.802132 | 6.486927e-49 | -8.615850e-47 |
| Msa0970040 | Msa1308860 | 0.832993 | 6.882225e-56 | -8.615850e-47 |
| Msa0970040 | Msa1335500 | 0.801672 | 8.062109e-49 | -8.615850e-47 |
| Msa0970040 | Msa1343460 | 0.833902 | 4.084539e-56 | -8.615850e-47 |
| Msa0970040 | Msa1347610 | 0.845443 | 4.047934e-59 | -8.615850e-47 |
| Msa0970040 | Msa1351900 | 0.809372 | 1.954525e-50 | -8.615850e-47 |
| Msa0970040 | Msa1352580 | 0.810840 | 9.438127e-51 | -8.615850e-47 |
| Msa0970040 | Msa1356450 | 0.973546 | 1.299494e-136 | -8.615850e-47 |
| Msa0970040 | Msa1357070 | 0.838121 | 3.471317e-57 | -8.615850e-47 |
| Msa0970040 | Msa1362590 | 0.812164 | 4.864396e-51 | -8.615850e-47 |
| Msa0970040 | Msa1363010 | 0.813651 | 2.298122e-51 | -8.615850e-47 |
| Msa0970040 | Msa1368170 | 0.808668 | 2.765492e-50 | -8.615850e-47 |
| Msa0970040 | Msa1371270 | 0.835172 | 1.958169e-56 | -8.615850e-47 |
| Msa0970040 | Msa1371530 | 0.819000 | 1.461470e-52 | -8.615850e-47 |
| Msa0970040 | Msa1371800 | 0.807799 | 4.236200e-50 | -8.615850e-47 |
| Msa0970040 | Msa1372030 | 0.825541 | 4.431024e-54 | -8.615850e-47 |
| Msa0970040 | Msa1376310 | 0.805417 | 1.348723e-49 | -8.615850e-47 |
| Msa0970040 | Msa1377140 | 0.818338 | 2.064720e-52 | -8.615850e-47 |
| Msa0970040 | Msa1379940 | 0.830086 | 3.580362e-55 | -8.615850e-47 |
| Msa0970040 | Msa1385570 | 0.823075 | 1.683389e-53 | -8.615850e-47 |
| Msa0970040 | Msa1395720 | 0.835443 | 1.672670e-56 | -8.615850e-47 |
| Msa0970040 | Msa1396110 | 0.853028 | 3.132725e-61 | -8.615850e-47 |
| Msa0970040 | Msa1417930 | 0.801441 | 8.992945e-49 | -8.615850e-47 |
| Msa0970040 | Msa1420830 | 0.873581 | 1.316339e-67 | -8.615850e-47 |
| Msa0970040 | Msa1429810 | 0.807115 | 5.918675e-50 | -8.615850e-47 |
| Msa0970040 | Msa1434300 | 0.850946 | 1.222283e-60 | -8.615850e-47 |
| Msa0970040 | Msa1434700 | 0.853065 | 3.056928e-61 | -8.615850e-47 |
| Msa0970040 | Msa1436640 | 0.820745 | 5.830269e-53 | -8.615850e-47 |
| Msa0970040 | Msa1438510 | 0.815593 | 8.537072e-52 | -8.615850e-47 |
| Msa0970040 | Msa1447900 | 0.819308 | 1.243629e-52 | -8.615850e-47 |
| Msa0970040 | Msa1450290 | 0.841509 | 4.551882e-58 | -8.615850e-47 |
| Msa0970040 | Msa1453030 | 0.819382 | 1.196193e-52 | -8.615850e-47 |
| Msa0970040 | Msa1456040 | 0.839347 | 1.672958e-57 | -8.615850e-47 |
| Msa0970040 | Msa1462780 | 0.810701 | 1.011230e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970040 | MtrunA17_Chr6g0448901 | 99.020 | 510 | 5 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1042 |
| Msa0970040 | MtrunA17_Chr4g0043311 | 78.411 | 491 | 106 | 0 | 20 | 510 | 7 | 497 | 0.0 | 818 |
| Msa0970040 | MtrunA17_Chr7g0263711 | 78.004 | 491 | 108 | 0 | 20 | 510 | 10 | 500 | 0.0 | 811 |
| Msa0970040 | MtrunA17_Chr4g0043301 | 79.430 | 491 | 101 | 0 | 20 | 510 | 10 | 500 | 0.0 | 808 |
| Msa0970040 | MtrunA17_Chr7g0265591 | 43.952 | 496 | 264 | 9 | 22 | 506 | 30 | 522 | 5.18e-133 | 395 |
| Msa0970040 | MtrunA17_Chr1g0197911 | 42.828 | 495 | 270 | 7 | 22 | 506 | 30 | 521 | 1.57e-131 | 392 |
| Msa0970040 | MtrunA17_Chr1g0179541 | 43.260 | 497 | 252 | 7 | 22 | 506 | 30 | 508 | 1.19e-126 | 379 |
| Msa0970040 | MtrunA17_Chr1g0202291 | 36.875 | 480 | 260 | 12 | 21 | 492 | 104 | 548 | 1.65e-85 | 275 |
| Msa0970040 | MtrunA17_Chr5g0400361 | 36.709 | 474 | 269 | 11 | 21 | 492 | 78 | 522 | 6.54e-85 | 272 |
| Msa0970040 | MtrunA17_Chr6g0463101 | 35.967 | 481 | 263 | 12 | 21 | 492 | 106 | 550 | 5.97e-84 | 270 |
| Msa0970040 | MtrunA17_Chr1g0206791 | 32.790 | 491 | 292 | 12 | 21 | 498 | 17 | 482 | 1.73e-74 | 244 |
| Msa0970040 | MtrunA17_Chr1g0188101 | 30.862 | 499 | 290 | 11 | 21 | 495 | 90 | 557 | 5.43e-74 | 244 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970040 | AT5G08570.1 | 88.039 | 510 | 61 | 0 | 1 | 510 | 1 | 510 | 0.0 | 947 |
| Msa0970040 | AT5G08570.2 | 88.039 | 510 | 61 | 0 | 1 | 510 | 1 | 510 | 0.0 | 947 |
| Msa0970040 | AT5G08570.3 | 88.039 | 510 | 61 | 0 | 1 | 510 | 1 | 510 | 0.0 | 947 |
| Msa0970040 | AT5G63680.3 | 86.863 | 510 | 67 | 0 | 1 | 510 | 1 | 510 | 0.0 | 932 |
| Msa0970040 | AT5G63680.1 | 86.863 | 510 | 67 | 0 | 1 | 510 | 1 | 510 | 0.0 | 932 |
| Msa0970040 | AT5G63680.2 | 86.863 | 510 | 67 | 0 | 1 | 510 | 1 | 510 | 0.0 | 932 |
| Msa0970040 | AT5G56350.1 | 79.837 | 491 | 99 | 0 | 20 | 510 | 8 | 498 | 0.0 | 820 |
| Msa0970040 | AT4G26390.1 | 78.208 | 491 | 107 | 0 | 20 | 510 | 7 | 497 | 0.0 | 803 |
| Msa0970040 | AT3G04050.1 | 69.960 | 506 | 147 | 4 | 6 | 506 | 1 | 506 | 0.0 | 726 |
| Msa0970040 | AT3G55650.1 | 68.390 | 503 | 155 | 3 | 12 | 510 | 8 | 510 | 0.0 | 703 |
| Msa0970040 | AT3G25960.1 | 69.661 | 501 | 139 | 4 | 12 | 510 | 8 | 497 | 0.0 | 703 |
| Msa0970040 | AT3G55810.1 | 66.397 | 494 | 144 | 4 | 21 | 510 | 17 | 492 | 0.0 | 654 |
| Msa0970040 | AT2G36580.1 | 44.646 | 495 | 262 | 8 | 22 | 506 | 30 | 522 | 3.97e-134 | 399 |
| Msa0970040 | AT3G52990.1 | 44.444 | 495 | 263 | 8 | 22 | 506 | 30 | 522 | 8.85e-134 | 398 |
| Msa0970040 | AT3G52990.2 | 43.100 | 471 | 256 | 8 | 46 | 506 | 1 | 469 | 2.96e-123 | 369 |
| Msa0970040 | AT1G32440.1 | 39.212 | 482 | 256 | 14 | 15 | 492 | 95 | 543 | 2.26e-87 | 280 |
| Msa0970040 | AT5G52920.1 | 36.076 | 474 | 272 | 11 | 21 | 492 | 111 | 555 | 2.10e-83 | 270 |
| Msa0970040 | AT3G22960.1 | 30.769 | 494 | 295 | 11 | 21 | 495 | 118 | 583 | 5.45e-72 | 240 |
| Msa0970040 | AT3G49160.3 | 34.300 | 207 | 123 | 6 | 135 | 332 | 389 | 591 | 6.10e-20 | 93.6 |
| Msa0970040 | AT3G49160.1 | 34.300 | 207 | 123 | 6 | 135 | 332 | 477 | 679 | 6.31e-20 | 94.0 |
Find 148 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCAAAATTGTTTGTACTTT+GGG | 0.213355 | 6_4:+1473769 | Msa0970040:CDS |
| GAGTTTCGCTCTGGCCTTAT+TGG | 0.243879 | 6_4:-1475851 | None:intergenic |
| ACCCAAAGTACAAACAATTT+TGG | 0.262629 | 6_4:-1473770 | None:intergenic |
| CAGAGGCTTGATTCCTATAT+TGG | 0.264607 | 6_4:+1476029 | Msa0970040:CDS |
| CACAACCCTTCCTGCATCTA+AGG | 0.283588 | 6_4:-1476238 | None:intergenic |
| TGTCCTTCTTTGAGTTGAAT+AGG | 0.285375 | 6_4:-1474681 | None:intergenic |
| TATATTAAGCTGTGCCTTGC+TGG | 0.290018 | 6_4:-1476006 | None:intergenic |
| GATTTCATAATCAGTACTTA+TGG | 0.291143 | 6_4:-1474712 | None:intergenic |
| TCATTTCAAGGTTGAGAATC+AGG | 0.297800 | 6_4:+1475393 | Msa0970040:intron |
| GCTCTGAATGAACTCGGTTT+TGG | 0.298410 | 6_4:+1476357 | Msa0970040:three_prime_UTR |
| ATTTAGCTGTTAGCAGGTTT+TGG | 0.299719 | 6_4:+1476326 | Msa0970040:three_prime_UTR |
| ACGCAAAAGCAGCCAGTAAA+TGG | 0.301492 | 6_4:+1473506 | Msa0970040:five_prime_UTR |
| CAGCTAAATCCTCCATTATA+TGG | 0.324721 | 6_4:-1476312 | None:intergenic |
| GTTGTTGCTCTTCATCGTAT+TGG | 0.325415 | 6_4:+1476156 | Msa0970040:CDS |
| GACCAAAATTGTTTGTACTT+TGG | 0.339741 | 6_4:+1473768 | Msa0970040:CDS |
| GACATAGACATACCATTTAC+TGG | 0.341424 | 6_4:-1473518 | None:intergenic |
| GCAGAATCATCCCTTGATTA+TGG | 0.346101 | 6_4:+1475745 | Msa0970040:CDS |
| TGCTGTACGCACAGCCAATA+AGG | 0.350511 | 6_4:+1475837 | Msa0970040:CDS |
| GCCAGGAAAATCTTCTCAAC+TGG | 0.350809 | 6_4:-1475496 | None:intergenic |
| GTTAATGTCCGCAAGGTTCT+CGG | 0.353104 | 6_4:+1475047 | Msa0970040:CDS |
| GCAATCATATCAATATTGTT+AGG | 0.355092 | 6_4:-1474993 | None:intergenic |
| TGCTCTTTCATTTGTTCGTA+AGG | 0.360649 | 6_4:+1475013 | Msa0970040:CDS |
| ATTTATAAGTGTAATCTTGT+TGG | 0.364853 | 6_4:+1475532 | Msa0970040:CDS |
| TGACCACAGACTCATTTGAT+TGG | 0.381256 | 6_4:+1475965 | Msa0970040:CDS |
| GCAGATCCTTCTGCCAATAT+AGG | 0.382735 | 6_4:-1476042 | None:intergenic |
| TGATCATGGATTCAAGCATC+TGG | 0.395013 | 6_4:-1475576 | None:intergenic |
| CTACATCAGTTGCTTCGGCT+CGG | 0.397785 | 6_4:-1475615 | None:intergenic |
| GAGCATAGAATGGTATTTCC+AGG | 0.403423 | 6_4:-1474792 | None:intergenic |
| TGCTGGTGCCTCATCACTGC+AGG | 0.408792 | 6_4:-1475989 | None:intergenic |
| GCGTGAGACTGATGCGTTCA+TGG | 0.409117 | 6_4:+1475444 | Msa0970040:CDS |
| AGACTTTCCAATGGACTCAT+AGG | 0.415998 | 6_4:-1475805 | None:intergenic |
| CGGACTGGCTTTCTGAAAGA+TGG | 0.416803 | 6_4:+1474654 | Msa0970040:CDS |
| ATGGTGGCCCGTGGTGATCT+TGG | 0.421038 | 6_4:+1475463 | Msa0970040:CDS |
| TAACTCATTGATATCATCTC+TGG | 0.422361 | 6_4:-1474744 | None:intergenic |
| AGAATCTACAGATGCAATTC+TGG | 0.426172 | 6_4:+1476080 | Msa0970040:CDS |
| TAAGGAAGATATTCTTGAAT+GGG | 0.428016 | 6_4:+1474965 | Msa0970040:CDS |
| TACATCAGTTGCTTCGGCTC+GGG | 0.429321 | 6_4:-1475614 | None:intergenic |
| GCTGTTTGTCCACCATATAA+TGG | 0.435925 | 6_4:+1476300 | Msa0970040:three_prime_UTR |
| CTTAAGTCAGCAACACAAAA+GGG | 0.437722 | 6_4:+1476111 | Msa0970040:CDS |
| AATCTTGTCTGTGGTAGTTC+CGG | 0.438220 | 6_4:+1475939 | Msa0970040:CDS |
| CTGCCTGTCCACTTGAAGCC+TGG | 0.442454 | 6_4:+1474774 | Msa0970040:CDS |
| CACGACCATCGTTTGGTAGT+TGG | 0.447300 | 6_4:-1473738 | None:intergenic |
| AGAAAGCCAGTCCGAATCTC+AGG | 0.453908 | 6_4:-1474645 | None:intergenic |
| GTAGCCAATGCAGTTCTTGA+TGG | 0.460232 | 6_4:+1475634 | Msa0970040:CDS |
| TGAATATAGCACCATAATCA+AGG | 0.462445 | 6_4:-1475756 | None:intergenic |
| AATGAGTCTGTGGTCAAAAC+CGG | 0.463086 | 6_4:-1475958 | None:intergenic |
| CTGTCAAAACTCTGCAATGT+TGG | 0.465660 | 6_4:+1474878 | Msa0970040:CDS |
| AAGTACTGATTATGAAATCA+AGG | 0.465812 | 6_4:+1474716 | Msa0970040:CDS |
| TCTTAAGTCAGCAACACAAA+AGG | 0.468356 | 6_4:+1476110 | Msa0970040:CDS |
| ATTGGCTACATCAGTTGCTT+CGG | 0.471027 | 6_4:-1475620 | None:intergenic |
| TGGAGGATTTAGCTGTTAGC+AGG | 0.473680 | 6_4:+1476320 | Msa0970040:three_prime_UTR |
| CCAAGTTAGTTGCTAAGTAT+AGG | 0.476764 | 6_4:+1475905 | Msa0970040:CDS |
| TTAGGAACACGACCATCGTT+TGG | 0.481093 | 6_4:-1473745 | None:intergenic |
| CAAAAGGGGCTTTGTAAACC+TGG | 0.486157 | 6_4:+1476126 | Msa0970040:CDS |
| TCCATTGCCTATGAGTCCAT+TGG | 0.486716 | 6_4:+1475798 | Msa0970040:CDS |
| CAGGGGCCTGAGATTCGGAC+TGG | 0.487007 | 6_4:+1474639 | Msa0970040:intron |
| TATTAGCTGGCCTTAGATGC+AGG | 0.487598 | 6_4:+1476228 | Msa0970040:three_prime_UTR |
| TTAATGTCCGCAAGGTTCTC+GGG | 0.488664 | 6_4:+1475048 | Msa0970040:CDS |
| GGAACTACCACAGACAAGAT+TGG | 0.490094 | 6_4:-1475937 | None:intergenic |
| ATTTAAAATGCAAGAAATGC+AGG | 0.490707 | 6_4:-1476429 | None:intergenic |
| GCTTCGGCTCGGGTTGGCCG+AGG | 0.492369 | 6_4:-1475604 | None:intergenic |
| TGTCAAAACTCTGCAATGTT+GGG | 0.494616 | 6_4:+1474879 | Msa0970040:CDS |
| ATAAGGAAGATATTCTTGAA+TGG | 0.496374 | 6_4:+1474964 | Msa0970040:CDS |
| CACTCTTACTGACAAGGATA+AGG | 0.497352 | 6_4:+1474947 | Msa0970040:CDS |
| CTTATCCTTGTCAGTAAGAG+TGG | 0.498847 | 6_4:-1474946 | None:intergenic |
| ACCGACTGTGTCATGCTTAG+TGG | 0.500132 | 6_4:+1475658 | Msa0970040:CDS |
| CTATATTCAAAGAGATGATA+AGG | 0.502593 | 6_4:+1475770 | Msa0970040:CDS |
| GGAAGATCCACCACAACACC+AGG | 0.502856 | 6_4:-1474924 | None:intergenic |
| TGGAAATACCATTCTATGCT+CGG | 0.505725 | 6_4:+1474794 | Msa0970040:CDS |
| TTTCCAGGCTTCAAGTGGAC+AGG | 0.509567 | 6_4:-1474777 | None:intergenic |
| CTTAGTGGTGAAAGTGCTGC+TGG | 0.513325 | 6_4:+1475673 | Msa0970040:CDS |
| CAATCATATCAATATTGTTA+GGG | 0.517496 | 6_4:-1474992 | None:intergenic |
| GCTCTTTCATTTGTTCGTAA+GGG | 0.518972 | 6_4:+1475014 | Msa0970040:CDS |
| TGGTACTCATGAATATCATC+AGG | 0.520603 | 6_4:+1473870 | Msa0970040:CDS |
| TGAACTTGCTGTCAAAATCA+TGG | 0.526619 | 6_4:+1475705 | Msa0970040:CDS |
| CACGACAATGAGTTTCGCTC+TGG | 0.526714 | 6_4:-1475860 | None:intergenic |
| AAGTCTGCTATGCATTCTAC+TGG | 0.527158 | 6_4:+1473910 | Msa0970040:CDS |
| TGTTCCATCCGAGCATAGAA+TGG | 0.527240 | 6_4:-1474802 | None:intergenic |
| TTCCATTCCAAGATCACCAC+GGG | 0.528799 | 6_4:-1475470 | None:intergenic |
| ATGTCGAACATAGACATTGA+AGG | 0.535384 | 6_4:+1473706 | Msa0970040:CDS |
| ATCTCAACAGATCTCGAAGC+AGG | 0.538705 | 6_4:-1473793 | None:intergenic |
| ACAGACAAGATTGGAACTGC+TGG | 0.538859 | 6_4:-1475928 | None:intergenic |
| CCAGGAAAATCTTCTCAACT+GGG | 0.540531 | 6_4:-1475495 | None:intergenic |
| CCTATACTTAGCAACTAACT+TGG | 0.544461 | 6_4:-1475905 | None:intergenic |
| AAACCTATTCAACTCAAAGA+AGG | 0.544786 | 6_4:+1474678 | Msa0970040:CDS |
| TGGCCGAGGAGACTTGATCA+TGG | 0.546979 | 6_4:-1475590 | None:intergenic |
| TCAGTTGCTTCGGCTCGGGT+TGG | 0.547204 | 6_4:-1475610 | None:intergenic |
| ATCTGGGTAGCAGTCACCAC+AGG | 0.548128 | 6_4:-1475559 | None:intergenic |
| CAATCTCCCTGGTGTTGTGG+TGG | 0.549734 | 6_4:+1474917 | Msa0970040:CDS |
| TTGTCCTGTGATCAAGAAGC+CGG | 0.554022 | 6_4:+1474840 | Msa0970040:CDS |
| TAACTACTGAAGCGGTGGGT+GGG | 0.554952 | 6_4:+1473647 | Msa0970040:five_prime_UTR |
| TGGTATTTCCAGGCTTCAAG+TGG | 0.557830 | 6_4:-1474782 | None:intergenic |
| ACTCTGCAATGTTGGGTGAG+AGG | 0.560793 | 6_4:+1474886 | Msa0970040:CDS |
| AGAGCAACAACGGCGTCACC+AGG | 0.569748 | 6_4:-1476144 | None:intergenic |
| GGTTCCATCAAGAACTGCAT+TGG | 0.573593 | 6_4:-1475638 | None:intergenic |
| ACAGCGACATCTAACAGTAC+CGG | 0.574440 | 6_4:-1474859 | None:intergenic |
| GCATATTCAGTTGATGTCAA+AGG | 0.575993 | 6_4:+1475082 | Msa0970040:CDS |
| AGCTGGCCTTAGATGCAGGA+AGG | 0.577448 | 6_4:+1476232 | Msa0970040:three_prime_UTR |
| TCCAATGGACTCATAGGCAA+TGG | 0.578303 | 6_4:-1475799 | None:intergenic |
| TTGATTCCTATATTGGCAGA+AGG | 0.579355 | 6_4:+1476036 | Msa0970040:CDS |
| AGCAGACTTGAGATTATCGA+GGG | 0.582018 | 6_4:-1473896 | None:intergenic |
| TGTCAATCTCCCTGGTGTTG+TGG | 0.583872 | 6_4:+1474914 | Msa0970040:CDS |
| ATGCACAATGTGTTATTAGC+TGG | 0.586719 | 6_4:+1476215 | Msa0970040:exon |
| TGTCGAACATAGACATTGAA+GGG | 0.588964 | 6_4:+1473707 | Msa0970040:CDS |
| TAGCTAACTACTGAAGCGGT+GGG | 0.588983 | 6_4:+1473643 | Msa0970040:five_prime_UTR |
| GATCATGGATTCAAGCATCT+GGG | 0.589960 | 6_4:-1475575 | None:intergenic |
| CTCATTGTCGTGCTGACACG+AGG | 0.591073 | 6_4:+1475871 | Msa0970040:CDS |
| CTAGCTAACTACTGAAGCGG+TGG | 0.592863 | 6_4:+1473642 | Msa0970040:five_prime_UTR |
| TTATCCTTGTCAGTAAGAGT+GGG | 0.593774 | 6_4:-1474945 | None:intergenic |
| AATCCATGATCAAGTCTCCT+CGG | 0.597161 | 6_4:+1475587 | Msa0970040:CDS |
| TGATCTTGTTAATGTCCGCA+AGG | 0.600121 | 6_4:+1475040 | Msa0970040:CDS |
| AGTACTGATTATGAAATCAA+GGG | 0.602246 | 6_4:+1474717 | Msa0970040:CDS |
| CTAACTACTGAAGCGGTGGG+TGG | 0.603474 | 6_4:+1473646 | Msa0970040:five_prime_UTR |
| GGCCCGTGGTGATCTTGGAA+TGG | 0.607650 | 6_4:+1475468 | Msa0970040:CDS |
| AGCAGTTCCAATCTTGTCTG+TGG | 0.608373 | 6_4:+1475930 | Msa0970040:CDS |
| GCTGGCCTTAGATGCAGGAA+GGG | 0.608607 | 6_4:+1476233 | Msa0970040:three_prime_UTR |
| TGCCGTCATGCTCGACACCA+AGG | 0.609600 | 6_4:+1473942 | Msa0970040:CDS |
| GAATATAGCACCATAATCAA+GGG | 0.615983 | 6_4:-1475755 | None:intergenic |
| TATCTAGCTAACTACTGAAG+CGG | 0.621098 | 6_4:+1473639 | Msa0970040:five_prime_UTR |
| AAGGAAGATATTCTTGAATG+GGG | 0.623075 | 6_4:+1474966 | Msa0970040:CDS |
| TTGTCGTGCTGACACGAGGT+GGG | 0.624494 | 6_4:+1475875 | Msa0970040:CDS |
| ACCACTAAGCATGACACAGT+CGG | 0.629348 | 6_4:-1475659 | None:intergenic |
| CTAAATCCTCCATTATATGG+TGG | 0.630142 | 6_4:-1476309 | None:intergenic |
| TTCAAGGTTGAGAATCAGGA+GGG | 0.631704 | 6_4:+1475397 | Msa0970040:intron |
| AGTACCGGCTTCTTGATCAC+AGG | 0.634918 | 6_4:-1474844 | None:intergenic |
| TTTCAAGGTTGAGAATCAGG+AGG | 0.635083 | 6_4:+1475396 | Msa0970040:intron |
| GTTTGTCCACCATATAATGG+AGG | 0.635293 | 6_4:+1476303 | Msa0970040:three_prime_UTR |
| TTAAGTCAGCAACACAAAAG+GGG | 0.635960 | 6_4:+1476112 | Msa0970040:CDS |
| GATGCGTTCATGGTGGCCCG+TGG | 0.637855 | 6_4:+1475454 | Msa0970040:CDS |
| AACTGAATATGCTTAGCATG+TGG | 0.639472 | 6_4:-1475071 | None:intergenic |
| ATTGTCGTGCTGACACGAGG+TGG | 0.639978 | 6_4:+1475874 | Msa0970040:CDS |
| GATGATGCAAGACTTTCCAA+TGG | 0.640580 | 6_4:-1475814 | None:intergenic |
| GGTCCAATCAAATGAGTCTG+TGG | 0.640580 | 6_4:-1475968 | None:intergenic |
| AATACCATTCTATGCTCGGA+TGG | 0.643051 | 6_4:+1474798 | Msa0970040:CDS |
| TAGCAGACTTGAGATTATCG+AGG | 0.648969 | 6_4:-1473897 | None:intergenic |
| AACCTTGGTGTCGAGCATGA+CGG | 0.653974 | 6_4:-1473944 | None:intergenic |
| TGATTGGACCTGCAGTGATG+AGG | 0.656525 | 6_4:+1475981 | Msa0970040:CDS |
| TCTTCCCACTCTTACTGACA+AGG | 0.660905 | 6_4:+1474941 | Msa0970040:CDS |
| GCAGTGATGAGGCACCAGCA+AGG | 0.676635 | 6_4:+1475992 | Msa0970040:CDS |
| AATACGATGAAGAGCAACAA+CGG | 0.684681 | 6_4:-1476154 | None:intergenic |
| TAATCTTGTTGGCAAGCCTG+TGG | 0.690354 | 6_4:+1475543 | Msa0970040:CDS |
| AGGCACAGCTTAATATACAG+AGG | 0.690557 | 6_4:+1476012 | Msa0970040:CDS |
| TTTCCATTCCAAGATCACCA+CGG | 0.695446 | 6_4:-1475471 | None:intergenic |
| TTGAACCAACTACCAAACGA+TGG | 0.710339 | 6_4:+1473733 | Msa0970040:CDS |
| TGAACGCATCAGTCTCACGC+AGG | 0.710992 | 6_4:-1475441 | None:intergenic |
| TGAGACTGATGCGTTCATGG+TGG | 0.741662 | 6_4:+1475447 | Msa0970040:CDS |
| GAAGATCCACCACAACACCA+GGG | 0.757023 | 6_4:-1474923 | None:intergenic |
| CATGTGGCCCGAGAACCTTG+CGG | 0.783590 | 6_4:-1475055 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAATTTTAATAATGATATAA+AGG | + | chr6_4:1475129-1475148 | Msa0970040:intron | 10.0% |
| !!! | GTTTTTAAATAATGATTTTG+TGG | + | chr6_4:1475366-1475385 | Msa0970040:intron | 15.0% |
| !! | TTGAAAAGTTGTTAATTGAA+GGG | - | chr6_4:1474169-1474188 | None:intergenic | 20.0% |
| !! | TTTGAAAAGTTGTTAATTGA+AGG | - | chr6_4:1474170-1474189 | None:intergenic | 20.0% |
| !!! | ATTATTAACGTTTTCATGTA+CGG | + | chr6_4:1474587-1474606 | Msa0970040:intron | 20.0% |
| !! | CAATCATATCAATATTGTTA+GGG | - | chr6_4:1474995-1475014 | None:intergenic | 20.0% |
| !! | ATTTATAAGTGTAATCTTGT+TGG | + | chr6_4:1475532-1475551 | Msa0970040:CDS | 20.0% |
| !!! | CATTTTAAATGACATTTTTG+TGG | + | chr6_4:1476442-1476461 | Msa0970040:three_prime_UTR | 20.0% |
| ! | ACCAAAATTGTTTGTACTTT+GGG | + | chr6_4:1473769-1473788 | Msa0970040:CDS | 25.0% |
| ! | ATTCAAAAACTTCTTAAAGC+TGG | + | chr6_4:1473817-1473836 | Msa0970040:CDS | 25.0% |
| !!! | TCAATTCTAGAATCAATTCT+AGG | + | chr6_4:1474137-1474156 | Msa0970040:intron | 25.0% |
| ! | TAGCAATAAAATAGTCTGTA+AGG | - | chr6_4:1474508-1474527 | None:intergenic | 25.0% |
| ! | GATTTCATAATCAGTACTTA+TGG | - | chr6_4:1474715-1474734 | None:intergenic | 25.0% |
| !!! | AAGTACTGATTATGAAATCA+AGG | + | chr6_4:1474716-1474735 | Msa0970040:CDS | 25.0% |
| !!! | AGTACTGATTATGAAATCAA+GGG | + | chr6_4:1474717-1474736 | Msa0970040:CDS | 25.0% |
| ! | ATAAGGAAGATATTCTTGAA+TGG | + | chr6_4:1474964-1474983 | Msa0970040:CDS | 25.0% |
| ! | TAAGGAAGATATTCTTGAAT+GGG | + | chr6_4:1474965-1474984 | Msa0970040:CDS | 25.0% |
| ! | GCAATCATATCAATATTGTT+AGG | - | chr6_4:1474996-1475015 | None:intergenic | 25.0% |
| ! | CATTAGAAGATATATCAACA+AGG | - | chr6_4:1475217-1475236 | None:intergenic | 25.0% |
| ! | TCATATTAAACAGACAATCA+TGG | - | chr6_4:1475288-1475307 | None:intergenic | 25.0% |
| !! | TTTTGTGGAATTTCATTTCA+AGG | + | chr6_4:1475381-1475400 | Msa0970040:intron | 25.0% |
| ! | CTATATTCAAAGAGATGATA+AGG | + | chr6_4:1475770-1475789 | Msa0970040:CDS | 25.0% |
| !! | ATTTAAAATGCAAGAAATGC+AGG | - | chr6_4:1476432-1476451 | None:intergenic | 25.0% |
| !! | GTACAAACAATTTTGGTCTT+AGG | - | chr6_4:1473766-1473785 | None:intergenic | 30.0% |
| GACCAAAATTGTTTGTACTT+TGG | + | chr6_4:1473768-1473787 | Msa0970040:CDS | 30.0% | |
| ! | ACCCAAAGTACAAACAATTT+TGG | - | chr6_4:1473773-1473792 | None:intergenic | 30.0% |
| ATAGAAACAAGAACAAACCT+TGG | - | chr6_4:1473962-1473981 | None:intergenic | 30.0% | |
| ! | TTGAACAAGTGATTTGTGTT+TGG | + | chr6_4:1474078-1474097 | Msa0970040:intron | 30.0% |
| !!! | TTTTTTGTCTGTAGACAAAG+TGG | + | chr6_4:1474405-1474424 | Msa0970040:intron | 30.0% |
| AAGAGAATCATAACTGTACA+AGG | - | chr6_4:1474535-1474554 | None:intergenic | 30.0% | |
| AAACCTATTCAACTCAAAGA+AGG | + | chr6_4:1474678-1474697 | Msa0970040:CDS | 30.0% | |
| TAACTCATTGATATCATCTC+TGG | - | chr6_4:1474747-1474766 | None:intergenic | 30.0% | |
| AAGGAAGATATTCTTGAATG+GGG | + | chr6_4:1474966-1474985 | Msa0970040:CDS | 30.0% | |
| ATCACCATTTCATTTGTTTG+TGG | + | chr6_4:1475152-1475171 | Msa0970040:intron | 30.0% | |
| AACACCACAAACAAATGAAA+TGG | - | chr6_4:1475159-1475178 | None:intergenic | 30.0% | |
| TGCAATTCATTAATGGTGAA+GGG | - | chr6_4:1475191-1475210 | None:intergenic | 30.0% | |
| ATGCAATTCATTAATGGTGA+AGG | - | chr6_4:1475192-1475211 | None:intergenic | 30.0% | |
| AAGGACATGCAATTCATTAA+TGG | - | chr6_4:1475198-1475217 | None:intergenic | 30.0% | |
| GAATATAGCACCATAATCAA+GGG | - | chr6_4:1475758-1475777 | None:intergenic | 30.0% | |
| TGAATATAGCACCATAATCA+AGG | - | chr6_4:1475759-1475778 | None:intergenic | 30.0% | |
| !! | TATTTTGCTCTGAATGAACT+CGG | + | chr6_4:1476351-1476370 | Msa0970040:three_prime_UTR | 30.0% |
| GACATAGACATACCATTTAC+TGG | - | chr6_4:1473521-1473540 | None:intergenic | 35.0% | |
| TATCTAGCTAACTACTGAAG+CGG | + | chr6_4:1473639-1473658 | Msa0970040:five_prime_UTR | 35.0% | |
| ATGTCGAACATAGACATTGA+AGG | + | chr6_4:1473706-1473725 | Msa0970040:CDS | 35.0% | |
| TGTCGAACATAGACATTGAA+GGG | + | chr6_4:1473707-1473726 | Msa0970040:CDS | 35.0% | |
| ! | GCTCGTTTCAATTTTTCACA+TGG | + | chr6_4:1473850-1473869 | Msa0970040:CDS | 35.0% |
| TGGTACTCATGAATATCATC+AGG | + | chr6_4:1473870-1473889 | Msa0970040:CDS | 35.0% | |
| CATAGCAATAGCATAGCATA+GGG | + | chr6_4:1473987-1474006 | Msa0970040:intron | 35.0% | |
| !!! | TTTTTTGTCTGTAGACAACG+CGG | - | chr6_4:1474332-1474351 | None:intergenic | 35.0% |
| !!! | TCTACTGTACTGTTTTTGCA+GGG | + | chr6_4:1474621-1474640 | Msa0970040:intron | 35.0% |
| !! | TGTCCTTCTTTGAGTTGAAT+AGG | - | chr6_4:1474684-1474703 | None:intergenic | 35.0% |
| TGGAAATACCATTCTATGCT+CGG | + | chr6_4:1474794-1474813 | Msa0970040:CDS | 35.0% | |
| TGTCAAAACTCTGCAATGTT+GGG | + | chr6_4:1474879-1474898 | Msa0970040:CDS | 35.0% | |
| TTATCCTTGTCAGTAAGAGT+GGG | - | chr6_4:1474948-1474967 | None:intergenic | 35.0% | |
| TGCTCTTTCATTTGTTCGTA+AGG | + | chr6_4:1475013-1475032 | Msa0970040:CDS | 35.0% | |
| GCTCTTTCATTTGTTCGTAA+GGG | + | chr6_4:1475014-1475033 | Msa0970040:CDS | 35.0% | |
| AACTGAATATGCTTAGCATG+TGG | - | chr6_4:1475074-1475093 | None:intergenic | 35.0% | |
| ! | GCATATTCAGTTGATGTCAA+AGG | + | chr6_4:1475082-1475101 | Msa0970040:CDS | 35.0% |
| CAATTCATTAATGGTGAAGG+GGG | - | chr6_4:1475189-1475208 | None:intergenic | 35.0% | |
| GCAATTCATTAATGGTGAAG+GGG | - | chr6_4:1475190-1475209 | None:intergenic | 35.0% | |
| ATTAAGCACGACTTCAGAAT+TGG | - | chr6_4:1475345-1475364 | None:intergenic | 35.0% | |
| !! | AATTCTGAAGTCGTGCTTAA+TGG | + | chr6_4:1475344-1475363 | Msa0970040:intron | 35.0% |
| TCATTTCAAGGTTGAGAATC+AGG | + | chr6_4:1475393-1475412 | Msa0970040:intron | 35.0% | |
| ! | AAATCATCATTTTCTGTGCC+AGG | - | chr6_4:1475516-1475535 | None:intergenic | 35.0% |
| !! | TGATTTTGACAGCAAGTTCA+GGG | - | chr6_4:1475705-1475724 | None:intergenic | 35.0% |
| !! | ATGATTTTGACAGCAAGTTC+AGG | - | chr6_4:1475706-1475725 | None:intergenic | 35.0% |
| !! | TGAACTTGCTGTCAAAATCA+TGG | + | chr6_4:1475705-1475724 | Msa0970040:CDS | 35.0% |
| CCTATACTTAGCAACTAACT+TGG | - | chr6_4:1475908-1475927 | None:intergenic | 35.0% | |
| CCAAGTTAGTTGCTAAGTAT+AGG | + | chr6_4:1475905-1475924 | Msa0970040:CDS | 35.0% | |
| TTGATTCCTATATTGGCAGA+AGG | + | chr6_4:1476036-1476055 | Msa0970040:CDS | 35.0% | |
| AGAATCTACAGATGCAATTC+TGG | + | chr6_4:1476080-1476099 | Msa0970040:CDS | 35.0% | |
| TCTTAAGTCAGCAACACAAA+AGG | + | chr6_4:1476110-1476129 | Msa0970040:CDS | 35.0% | |
| CTTAAGTCAGCAACACAAAA+GGG | + | chr6_4:1476111-1476130 | Msa0970040:CDS | 35.0% | |
| TTAAGTCAGCAACACAAAAG+GGG | + | chr6_4:1476112-1476131 | Msa0970040:CDS | 35.0% | |
| AATACGATGAAGAGCAACAA+CGG | - | chr6_4:1476157-1476176 | None:intergenic | 35.0% | |
| ! | ATGCACAATGTGTTATTAGC+TGG | + | chr6_4:1476215-1476234 | Msa0970040:exon | 35.0% |
| CTAAATCCTCCATTATATGG+TGG | - | chr6_4:1476312-1476331 | None:intergenic | 35.0% | |
| CAGCTAAATCCTCCATTATA+TGG | - | chr6_4:1476315-1476334 | None:intergenic | 35.0% | |
| ! | ATTTAGCTGTTAGCAGGTTT+TGG | + | chr6_4:1476326-1476345 | Msa0970040:three_prime_UTR | 35.0% |
| TTGAACCAACTACCAAACGA+TGG | + | chr6_4:1473733-1473752 | Msa0970040:CDS | 40.0% | |
| AGCAGACTTGAGATTATCGA+GGG | - | chr6_4:1473899-1473918 | None:intergenic | 40.0% | |
| TAGCAGACTTGAGATTATCG+AGG | - | chr6_4:1473900-1473919 | None:intergenic | 40.0% | |
| AAGTCTGCTATGCATTCTAC+TGG | + | chr6_4:1473910-1473929 | Msa0970040:CDS | 40.0% | |
| GCATAGCAATAGCATAGCAT+AGG | + | chr6_4:1473986-1474005 | Msa0970040:intron | 40.0% | |
| CCTCAGCAACATGATATTGA+TGG | - | chr6_4:1474363-1474382 | None:intergenic | 40.0% | |
| CCATCAATATCATGTTGCTG+AGG | + | chr6_4:1474360-1474379 | Msa0970040:intron | 40.0% | |
| TCGTTTGTGTGACTTTCAAG+TGG | - | chr6_4:1474445-1474464 | None:intergenic | 40.0% | |
| AAGTCACACAAACGACTGTA+AGG | + | chr6_4:1474450-1474469 | Msa0970040:intron | 40.0% | |
| !!! | CTCTACTGTACTGTTTTTGC+AGG | + | chr6_4:1474620-1474639 | Msa0970040:intron | 40.0% |
| !!! | CTACTGTACTGTTTTTGCAG+GGG | + | chr6_4:1474622-1474641 | Msa0970040:intron | 40.0% |
| GAGCATAGAATGGTATTTCC+AGG | - | chr6_4:1474795-1474814 | None:intergenic | 40.0% | |
| AATACCATTCTATGCTCGGA+TGG | + | chr6_4:1474798-1474817 | Msa0970040:CDS | 40.0% | |
| CTGTCAAAACTCTGCAATGT+TGG | + | chr6_4:1474878-1474897 | Msa0970040:CDS | 40.0% | |
| AGGAAAAATGTCAATCTCCC+TGG | + | chr6_4:1474906-1474925 | Msa0970040:CDS | 40.0% | |
| CTTATCCTTGTCAGTAAGAG+TGG | - | chr6_4:1474949-1474968 | None:intergenic | 40.0% | |
| CACTCTTACTGACAAGGATA+AGG | + | chr6_4:1474947-1474966 | Msa0970040:CDS | 40.0% | |
| TGATCTTGTTAATGTCCGCA+AGG | + | chr6_4:1475040-1475059 | Msa0970040:CDS | 40.0% | |
| TTTCAAGGTTGAGAATCAGG+AGG | + | chr6_4:1475396-1475415 | Msa0970040:intron | 40.0% | |
| TTCAAGGTTGAGAATCAGGA+GGG | + | chr6_4:1475397-1475416 | Msa0970040:intron | 40.0% | |
| TTTCCATTCCAAGATCACCA+CGG | - | chr6_4:1475474-1475493 | None:intergenic | 40.0% | |
| CCAGGAAAATCTTCTCAACT+GGG | - | chr6_4:1475498-1475517 | None:intergenic | 40.0% | |
| GATCATGGATTCAAGCATCT+GGG | - | chr6_4:1475578-1475597 | None:intergenic | 40.0% | |
| TGATCATGGATTCAAGCATC+TGG | - | chr6_4:1475579-1475598 | None:intergenic | 40.0% | |
| AATCCATGATCAAGTCTCCT+CGG | + | chr6_4:1475587-1475606 | Msa0970040:CDS | 40.0% | |
| ATTGGCTACATCAGTTGCTT+CGG | - | chr6_4:1475623-1475642 | None:intergenic | 40.0% | |
| GCAGAATCATCCCTTGATTA+TGG | + | chr6_4:1475745-1475764 | Msa0970040:CDS | 40.0% | |
| ! | AGACTTTCCAATGGACTCAT+AGG | - | chr6_4:1475808-1475827 | None:intergenic | 40.0% |
| GATGATGCAAGACTTTCCAA+TGG | - | chr6_4:1475817-1475836 | None:intergenic | 40.0% | |
| AATCTTGTCTGTGGTAGTTC+CGG | + | chr6_4:1475939-1475958 | Msa0970040:CDS | 40.0% | |
| AATGAGTCTGTGGTCAAAAC+CGG | - | chr6_4:1475961-1475980 | None:intergenic | 40.0% | |
| TGACCACAGACTCATTTGAT+TGG | + | chr6_4:1475965-1475984 | Msa0970040:CDS | 40.0% | |
| TATATTAAGCTGTGCCTTGC+TGG | - | chr6_4:1476009-1476028 | None:intergenic | 40.0% | |
| AGGCACAGCTTAATATACAG+AGG | + | chr6_4:1476012-1476031 | Msa0970040:CDS | 40.0% | |
| CAGAGGCTTGATTCCTATAT+TGG | + | chr6_4:1476029-1476048 | Msa0970040:CDS | 40.0% | |
| GTTGTTGCTCTTCATCGTAT+TGG | + | chr6_4:1476156-1476175 | Msa0970040:CDS | 40.0% | |
| GCTGTTTGTCCACCATATAA+TGG | + | chr6_4:1476300-1476319 | Msa0970040:three_prime_UTR | 40.0% | |
| GTTTGTCCACCATATAATGG+AGG | + | chr6_4:1476303-1476322 | Msa0970040:three_prime_UTR | 40.0% | |
| !!! | TTACTGGCTGCTTTTGCGTT+TGG | - | chr6_4:1473505-1473524 | None:intergenic | 45.0% |
| ACGCAAAAGCAGCCAGTAAA+TGG | + | chr6_4:1473506-1473525 | Msa0970040:five_prime_UTR | 45.0% | |
| TAGCTAACTACTGAAGCGGT+GGG | + | chr6_4:1473643-1473662 | Msa0970040:five_prime_UTR | 45.0% | |
| TTAGGAACACGACCATCGTT+TGG | - | chr6_4:1473748-1473767 | None:intergenic | 45.0% | |
| ATCTCAACAGATCTCGAAGC+AGG | - | chr6_4:1473796-1473815 | None:intergenic | 45.0% | |
| TATGTCAAGACATCCTCACC+TGG | + | chr6_4:1474255-1474274 | Msa0970040:intron | 45.0% | |
| ATGTCAAGACATCCTCACCT+GGG | + | chr6_4:1474256-1474275 | Msa0970040:intron | 45.0% | |
| ACAAACGACTGTAAGGTCCT+AGG | + | chr6_4:1474457-1474476 | Msa0970040:intron | 45.0% | |
| AAGGTTTGACACCTTCACCT+GGG | - | chr6_4:1474489-1474508 | None:intergenic | 45.0% | |
| TAAGGTTTGACACCTTCACC+TGG | - | chr6_4:1474490-1474509 | None:intergenic | 45.0% | |
| TGGTATTTCCAGGCTTCAAG+TGG | - | chr6_4:1474785-1474804 | None:intergenic | 45.0% | |
| TGTTCCATCCGAGCATAGAA+TGG | - | chr6_4:1474805-1474824 | None:intergenic | 45.0% | |
| TTGTCCTGTGATCAAGAAGC+CGG | + | chr6_4:1474840-1474859 | Msa0970040:CDS | 45.0% | |
| ACAGCGACATCTAACAGTAC+CGG | - | chr6_4:1474862-1474881 | None:intergenic | 45.0% | |
| TCTTCCCACTCTTACTGACA+AGG | + | chr6_4:1474941-1474960 | Msa0970040:CDS | 45.0% | |
| GTTAATGTCCGCAAGGTTCT+CGG | + | chr6_4:1475047-1475066 | Msa0970040:CDS | 45.0% | |
| TTAATGTCCGCAAGGTTCTC+GGG | + | chr6_4:1475048-1475067 | Msa0970040:CDS | 45.0% | |
| TTCCATTCCAAGATCACCAC+GGG | - | chr6_4:1475473-1475492 | None:intergenic | 45.0% | |
| ! | CCCAGTTGAGAAGATTTTCC+TGG | + | chr6_4:1475495-1475514 | Msa0970040:CDS | 45.0% |
| GCCAGGAAAATCTTCTCAAC+TGG | - | chr6_4:1475499-1475518 | None:intergenic | 45.0% | |
| TAATCTTGTTGGCAAGCCTG+TGG | + | chr6_4:1475543-1475562 | Msa0970040:CDS | 45.0% | |
| GTAGCCAATGCAGTTCTTGA+TGG | + | chr6_4:1475634-1475653 | Msa0970040:CDS | 45.0% | |
| GGTTCCATCAAGAACTGCAT+TGG | - | chr6_4:1475641-1475660 | None:intergenic | 45.0% | |
| ACCACTAAGCATGACACAGT+CGG | - | chr6_4:1475662-1475681 | None:intergenic | 45.0% | |
| TCCATTGCCTATGAGTCCAT+TGG | + | chr6_4:1475798-1475817 | Msa0970040:CDS | 45.0% | |
| ! | TCCAATGGACTCATAGGCAA+TGG | - | chr6_4:1475802-1475821 | None:intergenic | 45.0% |
| ACAGACAAGATTGGAACTGC+TGG | - | chr6_4:1475931-1475950 | None:intergenic | 45.0% | |
| AGCAGTTCCAATCTTGTCTG+TGG | + | chr6_4:1475930-1475949 | Msa0970040:CDS | 45.0% | |
| GGAACTACCACAGACAAGAT+TGG | - | chr6_4:1475940-1475959 | None:intergenic | 45.0% | |
| GGTCCAATCAAATGAGTCTG+TGG | - | chr6_4:1475971-1475990 | None:intergenic | 45.0% | |
| GCAGATCCTTCTGCCAATAT+AGG | - | chr6_4:1476045-1476064 | None:intergenic | 45.0% | |
| ! | CAAAAGGGGCTTTGTAAACC+TGG | + | chr6_4:1476126-1476145 | Msa0970040:CDS | 45.0% |
| !! | TATTAGCTGGCCTTAGATGC+AGG | + | chr6_4:1476228-1476247 | Msa0970040:three_prime_UTR | 45.0% |
| TGGAGGATTTAGCTGTTAGC+AGG | + | chr6_4:1476320-1476339 | Msa0970040:three_prime_UTR | 45.0% | |
| !! | GCTCTGAATGAACTCGGTTT+TGG | + | chr6_4:1476357-1476376 | Msa0970040:three_prime_UTR | 45.0% |
| CTAGCTAACTACTGAAGCGG+TGG | + | chr6_4:1473642-1473661 | Msa0970040:five_prime_UTR | 50.0% | |
| TAACTACTGAAGCGGTGGGT+GGG | + | chr6_4:1473647-1473666 | Msa0970040:five_prime_UTR | 50.0% | |
| ! | CACGACCATCGTTTGGTAGT+TGG | - | chr6_4:1473741-1473760 | None:intergenic | 50.0% |
| !! | AACCTTGGTGTCGAGCATGA+CGG | - | chr6_4:1473947-1473966 | None:intergenic | 50.0% |
| GAGATTGTGGGTACAAACCC+AGG | - | chr6_4:1474276-1474295 | None:intergenic | 50.0% | |
| ACGCACAACTGCGAGATTGT+GGG | - | chr6_4:1474288-1474307 | None:intergenic | 50.0% | |
| ! | AAGGTCCTAGGTTCTAACCC+AGG | + | chr6_4:1474469-1474488 | Msa0970040:intron | 50.0% |
| ! | CTTCACCTGGGTTAGAACCT+AGG | - | chr6_4:1474477-1474496 | None:intergenic | 50.0% |
| ! | CTAGGTTCTAACCCAGGTGA+AGG | + | chr6_4:1474475-1474494 | Msa0970040:intron | 50.0% |
| ! | TTTTGCAGGGGCCTGAGATT+CGG | + | chr6_4:1474634-1474653 | Msa0970040:intron | 50.0% |
| AGAAAGCCAGTCCGAATCTC+AGG | - | chr6_4:1474648-1474667 | None:intergenic | 50.0% | |
| !! | CGGACTGGCTTTCTGAAAGA+TGG | + | chr6_4:1474654-1474673 | Msa0970040:CDS | 50.0% |
| TTTCCAGGCTTCAAGTGGAC+AGG | - | chr6_4:1474780-1474799 | None:intergenic | 50.0% | |
| !! | AGTACCGGCTTCTTGATCAC+AGG | - | chr6_4:1474847-1474866 | None:intergenic | 50.0% |
| ACTCTGCAATGTTGGGTGAG+AGG | + | chr6_4:1474886-1474905 | Msa0970040:CDS | 50.0% | |
| ! | TGTCAATCTCCCTGGTGTTG+TGG | + | chr6_4:1474914-1474933 | Msa0970040:CDS | 50.0% |
| GAAGATCCACCACAACACCA+GGG | - | chr6_4:1474926-1474945 | None:intergenic | 50.0% | |
| TGAGACTGATGCGTTCATGG+TGG | + | chr6_4:1475447-1475466 | Msa0970040:CDS | 50.0% | |
| TACATCAGTTGCTTCGGCTC+GGG | - | chr6_4:1475617-1475636 | None:intergenic | 50.0% | |
| CTACATCAGTTGCTTCGGCT+CGG | - | chr6_4:1475618-1475637 | None:intergenic | 50.0% | |
| ACCGACTGTGTCATGCTTAG+TGG | + | chr6_4:1475658-1475677 | Msa0970040:CDS | 50.0% | |
| !! | CTTAGTGGTGAAAGTGCTGC+TGG | + | chr6_4:1475673-1475692 | Msa0970040:CDS | 50.0% |
| TGCTGTACGCACAGCCAATA+AGG | + | chr6_4:1475837-1475856 | Msa0970040:CDS | 50.0% | |
| !! | GAGTTTCGCTCTGGCCTTAT+TGG | - | chr6_4:1475854-1475873 | None:intergenic | 50.0% |
| CACGACAATGAGTTTCGCTC+TGG | - | chr6_4:1475863-1475882 | None:intergenic | 50.0% | |
| TGATTGGACCTGCAGTGATG+AGG | + | chr6_4:1475981-1476000 | Msa0970040:CDS | 50.0% | |
| CACAACCCTTCCTGCATCTA+AGG | - | chr6_4:1476241-1476260 | None:intergenic | 50.0% | |
| CTAACTACTGAAGCGGTGGG+TGG | + | chr6_4:1473646-1473665 | Msa0970040:five_prime_UTR | 55.0% | |
| TGTGGGTACAAACCCAGGTG+AGG | - | chr6_4:1474271-1474290 | None:intergenic | 55.0% | |
| CACGCACAACTGCGAGATTG+TGG | - | chr6_4:1474289-1474308 | None:intergenic | 55.0% | |
| !! | CAATCTCCCTGGTGTTGTGG+TGG | + | chr6_4:1474917-1474936 | Msa0970040:CDS | 55.0% |
| GGAAGATCCACCACAACACC+AGG | - | chr6_4:1474927-1474946 | None:intergenic | 55.0% | |
| TGAACGCATCAGTCTCACGC+AGG | - | chr6_4:1475444-1475463 | None:intergenic | 55.0% | |
| GCGTGAGACTGATGCGTTCA+TGG | + | chr6_4:1475444-1475463 | Msa0970040:CDS | 55.0% | |
| ATCTGGGTAGCAGTCACCAC+AGG | - | chr6_4:1475562-1475581 | None:intergenic | 55.0% | |
| TGGCCGAGGAGACTTGATCA+TGG | - | chr6_4:1475593-1475612 | None:intergenic | 55.0% | |
| ! | CTCATTGTCGTGCTGACACG+AGG | + | chr6_4:1475871-1475890 | Msa0970040:CDS | 55.0% |
| ! | ATTGTCGTGCTGACACGAGG+TGG | + | chr6_4:1475874-1475893 | Msa0970040:CDS | 55.0% |
| ! | TTGTCGTGCTGACACGAGGT+GGG | + | chr6_4:1475875-1475894 | Msa0970040:CDS | 55.0% |
| !! | AGCTGGCCTTAGATGCAGGA+AGG | + | chr6_4:1476232-1476251 | Msa0970040:three_prime_UTR | 55.0% |
| !! | GCTGGCCTTAGATGCAGGAA+GGG | + | chr6_4:1476233-1476252 | Msa0970040:three_prime_UTR | 55.0% |
| TGCCGTCATGCTCGACACCA+AGG | + | chr6_4:1473942-1473961 | Msa0970040:CDS | 60.0% | |
| CTGCCTGTCCACTTGAAGCC+TGG | + | chr6_4:1474774-1474793 | Msa0970040:CDS | 60.0% | |
| CATGTGGCCCGAGAACCTTG+CGG | - | chr6_4:1475058-1475077 | None:intergenic | 60.0% | |
| ATGGTGGCCCGTGGTGATCT+TGG | + | chr6_4:1475463-1475482 | Msa0970040:CDS | 60.0% | |
| GGCCCGTGGTGATCTTGGAA+TGG | + | chr6_4:1475468-1475487 | Msa0970040:CDS | 60.0% | |
| !! | TCAGTTGCTTCGGCTCGGGT+TGG | - | chr6_4:1475613-1475632 | None:intergenic | 60.0% |
| TGCTGGTGCCTCATCACTGC+AGG | - | chr6_4:1475992-1476011 | None:intergenic | 60.0% | |
| ! | GCAGTGATGAGGCACCAGCA+AGG | + | chr6_4:1475992-1476011 | Msa0970040:CDS | 60.0% |
| AGAGCAACAACGGCGTCACC+AGG | - | chr6_4:1476147-1476166 | None:intergenic | 60.0% | |
| CAGGGGCCTGAGATTCGGAC+TGG | + | chr6_4:1474639-1474658 | Msa0970040:intron | 65.0% | |
| GATGCGTTCATGGTGGCCCG+TGG | + | chr6_4:1475454-1475473 | Msa0970040:CDS | 65.0% | |
| !! | GCTTCGGCTCGGGTTGGCCG+AGG | - | chr6_4:1475607-1475626 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 1473470 | 1476505 | 1473470 | ID=Msa0970040;Name=Msa0970040 |
| chr6_4 | mRNA | 1473470 | 1476505 | 1473470 | ID=Msa0970040-mRNA-1;Parent=Msa0970040;Name=Msa0970040-mRNA-1;_AED=0.01;_eAED=0.01;_QI=140|1|1|1|0.66|0.5|4|290|510 |
| chr6_4 | exon | 1473470 | 1473527 | 1473470 | ID=Msa0970040-mRNA-1:exon:733;Parent=Msa0970040-mRNA-1 |
| chr6_4 | exon | 1473624 | 1473963 | 1473624 | ID=Msa0970040-mRNA-1:exon:734;Parent=Msa0970040-mRNA-1 |
| chr6_4 | exon | 1474642 | 1475103 | 1474642 | ID=Msa0970040-mRNA-1:exon:735;Parent=Msa0970040-mRNA-1 |
| chr6_4 | exon | 1475403 | 1476505 | 1475403 | ID=Msa0970040-mRNA-1:exon:736;Parent=Msa0970040-mRNA-1 |
| chr6_4 | five_prime_UTR | 1473470 | 1473527 | 1473470 | ID=Msa0970040-mRNA-1:five_prime_utr;Parent=Msa0970040-mRNA-1 |
| chr6_4 | five_prime_UTR | 1473624 | 1473705 | 1473624 | ID=Msa0970040-mRNA-1:five_prime_utr;Parent=Msa0970040-mRNA-1 |
| chr6_4 | CDS | 1473706 | 1473963 | 1473706 | ID=Msa0970040-mRNA-1:cds;Parent=Msa0970040-mRNA-1 |
| chr6_4 | CDS | 1474642 | 1475103 | 1474642 | ID=Msa0970040-mRNA-1:cds;Parent=Msa0970040-mRNA-1 |
| chr6_4 | CDS | 1475403 | 1476215 | 1475403 | ID=Msa0970040-mRNA-1:cds;Parent=Msa0970040-mRNA-1 |
| chr6_4 | three_prime_UTR | 1476216 | 1476505 | 1476216 | ID=Msa0970040-mRNA-1:three_prime_utr;Parent=Msa0970040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
