AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1452560


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1452560 MtrunA17_Chr1g0160901 88.108 185 17 2 1 181 1 184 1.29e-107 305
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1452560 AT2G01590.2 46.218 119 54 3 65 181 64 174 1.28e-29 107
Msa1452560 AT2G01590.1 46.218 119 54 3 65 181 64 174 1.30e-29 107

Find 61 sgRNAs with CRISPR-Local

Find 370 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAATGGATGATGCCAATT+TGG 0.179324 tig0034029:-11626 Msa1452560:CDS
GAGGAGGAGAATCTGGGTTT+TGG 0.221469 tig0034029:+13419 None:intergenic
GGAGAGTGGCTGGGTGAAAA+TGG 0.232098 tig0034029:-12961 Msa1452560:CDS
TGATGACTCCAGAAGCTATT+AGG 0.284836 tig0034029:+11592 None:intergenic
TGGAGGAAGATTGGTTTGTT+TGG 0.288556 tig0034029:+13381 None:intergenic
GGTCGACGGGGAAGCTTGTT+TGG 0.309086 tig0034029:+13307 None:intergenic
ATTAGTAATAAGAATGGATT+TGG 0.315469 tig0034029:+13453 None:intergenic
TCAATGGATGATGCCAATTT+GGG 0.342444 tig0034029:-11625 Msa1452560:CDS
AGGAATGATATGGCCCAAAT+TGG 0.351556 tig0034029:+11612 None:intergenic
GGAGGAAGATTGGTTTGTTT+GGG 0.355312 tig0034029:+13382 None:intergenic
GACCACGATGGATTTGTTCT+TGG 0.365556 tig0034029:-13028 Msa1452560:CDS
TGTTGCAGGAAGAGGAATTC+TGG 0.376018 tig0034029:-11658 Msa1452560:intron
GGTGAAGAAGGAGGAGGAGG+AGG 0.376464 tig0034029:+13403 None:intergenic
ACCACGATGGATTTGTTCTT+GGG 0.379690 tig0034029:-13027 Msa1452560:CDS
AGAAGCTATTAGGAATGATA+TGG 0.381051 tig0034029:+11602 None:intergenic
ATTTAATGACTTTGCCGAAC+AGG 0.386369 tig0034029:-13618 None:intergenic
GAGAGTGGCTGGGTGAAAAT+GGG 0.391269 tig0034029:-12960 Msa1452560:CDS
GGTGTTAGTGGAGCGAAATC+TGG 0.391808 tig0034029:+12933 None:intergenic
TTCTGGTGTTTGCATTTCAA+TGG 0.404184 tig0034029:-11641 Msa1452560:CDS
TATCATCTATTTATCCTGTT+CGG 0.410137 tig0034029:+13604 None:intergenic
TTGGGTGAAGAAGGAGGAGG+AGG 0.416670 tig0034029:+13400 None:intergenic
TTGCTACTTACTGGTGTTAG+TGG 0.422960 tig0034029:+12921 None:intergenic
TTGGTTTGTTTGGGTGAAGA+AGG 0.439191 tig0034029:+13391 None:intergenic
TAATAACACTGAGCTATATC+AGG 0.443978 tig0034029:+13560 None:intergenic
CGAAGATGGTGATGGTCGAC+GGG 0.447807 tig0034029:+13294 None:intergenic
GAGGGAAACAGGAGAGTGGC+TGG 0.452230 tig0034029:-12971 Msa1452560:CDS
TCAATTTGCATGAGCGAAGA+TGG 0.459616 tig0034029:+13280 None:intergenic
AGAAGGAGGTCATCAAGAAA+AGG 0.462888 tig0034029:+11552 None:intergenic
ATATCATTCCTAATAGCTTC+TGG 0.464043 tig0034029:-11600 Msa1452560:CDS
AGTTGCATTAGTAATAAGAA+TGG 0.478683 tig0034029:+13447 None:intergenic
TTCTTGGGACAAGTATTTGA+AGG 0.485835 tig0034029:-13012 Msa1452560:CDS
ATTGAACGTGCCCTTGGCGC+TGG 0.500974 tig0034029:-13262 Msa1452560:CDS
TCAAGAAAAGGGACACTGAA+TGG 0.508495 tig0034029:+11564 None:intergenic
ATGCAAATTGAACGTGCCCT+TGG 0.511985 tig0034029:-13268 Msa1452560:CDS
GAATAATTGTAAATTACTCA+AGG 0.515784 tig0034029:-11501 Msa1452560:three_prime_UTR
ATAGAAGAAGTGTTGATAAG+AGG 0.516204 tig0034029:-13584 Msa1452560:five_prime_UTR
GACAGAGCATACTTGAGGTC+AGG 0.519678 tig0034029:+13220 None:intergenic
CTCTGAAGCTACCAGCGCCA+AGG 0.529782 tig0034029:+13251 None:intergenic
GAAGGAGGTCATCAAGAAAA+GGG 0.531359 tig0034029:+11553 None:intergenic
AATAATTGTAAATTACTCAA+GGG 0.533538 tig0034029:-11500 Msa1452560:three_prime_UTR
GCGAAGATGGTGATGGTCGA+CGG 0.545160 tig0034029:+13293 None:intergenic
AAATTACTCAAGGGGTTCAA+AGG 0.547210 tig0034029:-11491 Msa1452560:three_prime_UTR
GTTTGTTTGGGTGAAGAAGG+AGG 0.558804 tig0034029:+13394 None:intergenic
TCTTGGGACAAGTATTTGAA+GGG 0.567555 tig0034029:-13011 Msa1452560:CDS
CGACGGGGAAGCTTGTTTGG+AGG 0.576924 tig0034029:+13310 None:intergenic
ATAATTGTAAATTACTCAAG+GGG 0.580033 tig0034029:-11499 Msa1452560:three_prime_UTR
AACTGGATGTTCACAGAAGG+AGG 0.580320 tig0034029:+11538 None:intergenic
TGTTTGGGTGAAGAAGGAGG+AGG 0.589219 tig0034029:+13397 None:intergenic
AGAGTGGCTGGGTGAAAATG+GGG 0.590303 tig0034029:-12959 Msa1452560:CDS
TCTGAAGCTACCAGCGCCAA+GGG 0.590855 tig0034029:+13252 None:intergenic
GTTTGGAGGTAATGAAGTAG+TGG 0.605102 tig0034029:+13324 None:intergenic
AGAAACTGGATGTTCACAGA+AGG 0.608792 tig0034029:+11535 None:intergenic
AGGGAAACAGGAGAGTGGCT+GGG 0.620803 tig0034029:-12970 Msa1452560:CDS
GGCGCTGGTAGCTTCAGAGA+CGG 0.635842 tig0034029:-13247 Msa1452560:CDS
CATAAGCAAAACATTGCAGA+GGG 0.641080 tig0034029:+13493 None:intergenic
GCATAAGCAAAACATTGCAG+AGG 0.658841 tig0034029:+13492 None:intergenic
AGCTGAGGGAAACAGGAGAG+TGG 0.671817 tig0034029:-12975 Msa1452560:CDS
GAAGATGGTGATGGTCGACG+GGG 0.719959 tig0034029:+13295 None:intergenic
TGCATGAGCGAAGATGGTGA+TGG 0.732147 tig0034029:+13286 None:intergenic
TCCCAAGAACAAATCCATCG+TGG 0.736351 tig0034029:+13026 None:intergenic
AGACGTAAAGAAGACCACGA+TGG 0.745068 tig0034029:-13040 Msa1452560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTGAATAAATAATAAATAA+AGG + tig0034029:13292-13311 None:intergenic 10.0%
!!! CATATATTATTTTTATTACT+GGG - tig0034029:13606-13625 Msa1452560:five_prime_UTR 10.0%
!! ACTGAATAAATAATAAATAA+AGG + tig0034029:13292-13311 None:intergenic 10.0%
!! ATTATAACATTATGATGAAT+AGG - tig0034029:11812-11831 Msa1452560:intron 15.0%
!!! TTGTTTTTTAAATAAGAAAC+TGG - tig0034029:12250-12269 Msa1452560:intron 15.0%
!! AATAATTGTAAATTACTCAA+GGG - tig0034029:13479-13498 Msa1452560:CDS 15.0%
!! CCAGTAATAAAAATAATATA+TGG + tig0034029:13608-13627 None:intergenic 15.0%
!!! CCATATATTATTTTTATTAC+TGG - tig0034029:13605-13624 Msa1452560:five_prime_UTR 15.0%
!! ATTATAACATTATGATGAAT+AGG - tig0034029:11812-11831 Msa1452560:intron 15.0%
!!! TTGTTTTTTAAATAAGAAAC+TGG - tig0034029:12250-12269 Msa1452560:intron 15.0%
!! AATAATTGTAAATTACTCAA+GGG - tig0034029:13479-13498 Msa1452560:CDS 15.0%
!! CCAGTAATAAAAATAATATA+TGG + tig0034029:13608-13627 None:intergenic 15.0%
!!! ATTAGTAATAAGAATGGATT+TGG + tig0034029:11529-11548 None:intergenic 20.0%
!!! CACTTTTAACATTATGAAAT+TGG + tig0034029:11854-11873 None:intergenic 20.0%
!! TGTTAAAGAGACAAAAAATA+CGG + tig0034029:12103-12122 None:intergenic 20.0%
!!! TATTTTTTGTCTCTTTAACA+AGG - tig0034029:12103-12122 Msa1452560:intron 20.0%
!! GACTTTCTTGAAAAAATAAT+TGG + tig0034029:12905-12924 None:intergenic 20.0%
!! TAGAAAATTACAATGTTAAG+TGG + tig0034029:13239-13258 None:intergenic 20.0%
!! GAATAATTGTAAATTACTCA+AGG - tig0034029:13478-13497 Msa1452560:CDS 20.0%
!! ATAATTGTAAATTACTCAAG+GGG - tig0034029:13480-13499 Msa1452560:CDS 20.0%
!! ATTTAATAGTAAAAACACGT+TGG - tig0034029:13530-13549 Msa1452560:five_prime_UTR 20.0%
!!! ATTAGTAATAAGAATGGATT+TGG + tig0034029:11529-11548 None:intergenic 20.0%
!!! CACTTTTAACATTATGAAAT+TGG + tig0034029:11854-11873 None:intergenic 20.0%
!! TGTTAAAGAGACAAAAAATA+CGG + tig0034029:12103-12122 None:intergenic 20.0%
!!! TATTTTTTGTCTCTTTAACA+AGG - tig0034029:12103-12122 Msa1452560:intron 20.0%
!! GACTTTCTTGAAAAAATAAT+TGG + tig0034029:12905-12924 None:intergenic 20.0%
!! TAGAAAATTACAATGTTAAG+TGG + tig0034029:13239-13258 None:intergenic 20.0%
!! GAATAATTGTAAATTACTCA+AGG - tig0034029:13478-13497 Msa1452560:CDS 20.0%
!! ATAATTGTAAATTACTCAAG+GGG - tig0034029:13480-13499 Msa1452560:CDS 20.0%
!! ATTTAATAGTAAAAACACGT+TGG - tig0034029:13530-13549 Msa1452560:five_prime_UTR 20.0%
! TATCATCTATTTATCCTGTT+CGG + tig0034029:11378-11397 None:intergenic 25.0%
! AGTTGCATTAGTAATAAGAA+TGG + tig0034029:11535-11554 None:intergenic 25.0%
!! ATAAATGAAGGTTTTTGCTT+TGG + tig0034029:11621-11640 None:intergenic 25.0%
!!! TTTTTGGAGCTTATAAATGA+AGG + tig0034029:11633-11652 None:intergenic 25.0%
! ATCAAAATCCAGAATGAAAT+TGG + tig0034029:11879-11898 None:intergenic 25.0%
! AGATTATTACTTCTTACAAC+TGG + tig0034029:12308-12327 None:intergenic 25.0%
! GTTGTAAGAAGTAATAATCT+TGG - tig0034029:12308-12327 Msa1452560:intron 25.0%
!!! ACTTCAGAGTAAGTTTTATT+TGG + tig0034029:12393-12412 None:intergenic 25.0%
!!! ATAAAACTTACTCTGAAGTT+TGG - tig0034029:12394-12413 Msa1452560:intron 25.0%
! AAATAATTGGTCACACAATA+CGG + tig0034029:12892-12911 None:intergenic 25.0%
! AAGGAATAAAATGACTTTCT+TGG + tig0034029:13085-13104 None:intergenic 25.0%
! TGCTACAATTCAAAAAATGT+TGG + tig0034029:13203-13222 None:intergenic 25.0%
!! TTGAATTGTAGCATATTTTG+CGG - tig0034029:13210-13229 Msa1452560:intron 25.0%
! TTCAATCTACAAAAAGAAAC+TGG + tig0034029:13461-13480 None:intergenic 25.0%
! TATCATCTATTTATCCTGTT+CGG + tig0034029:11378-11397 None:intergenic 25.0%
! AGTTGCATTAGTAATAAGAA+TGG + tig0034029:11535-11554 None:intergenic 25.0%
!! ATAAATGAAGGTTTTTGCTT+TGG + tig0034029:11621-11640 None:intergenic 25.0%
!!! TTTTTGGAGCTTATAAATGA+AGG + tig0034029:11633-11652 None:intergenic 25.0%
! ATCAAAATCCAGAATGAAAT+TGG + tig0034029:11879-11898 None:intergenic 25.0%
! AGATTATTACTTCTTACAAC+TGG + tig0034029:12308-12327 None:intergenic 25.0%
! GTTGTAAGAAGTAATAATCT+TGG - tig0034029:12308-12327 Msa1452560:intron 25.0%
!!! ACTTCAGAGTAAGTTTTATT+TGG + tig0034029:12393-12412 None:intergenic 25.0%
!!! ATAAAACTTACTCTGAAGTT+TGG - tig0034029:12394-12413 Msa1452560:intron 25.0%
! AAATAATTGGTCACACAATA+CGG + tig0034029:12892-12911 None:intergenic 25.0%
! AAGGAATAAAATGACTTTCT+TGG + tig0034029:13085-13104 None:intergenic 25.0%
! TGCTACAATTCAAAAAATGT+TGG + tig0034029:13203-13222 None:intergenic 25.0%
!! TTGAATTGTAGCATATTTTG+CGG - tig0034029:13210-13229 Msa1452560:intron 25.0%
! TTCAATCTACAAAAAGAAAC+TGG + tig0034029:13461-13480 None:intergenic 25.0%
!! ATAGAAGAAGTGTTGATAAG+AGG - tig0034029:11395-11414 Msa1452560:three_prime_UTR 30.0%
TAATAACACTGAGCTATATC+AGG + tig0034029:11422-11441 None:intergenic 30.0%
!! TAATGAAGTAGTGGAGTTTT+TGG + tig0034029:11649-11668 None:intergenic 30.0%
!! CATGTCTTTTGCTTTGTTAT+AGG - tig0034029:12133-12152 Msa1452560:intron 30.0%
TTGTTATAGGTGATTATGAG+TGG - tig0034029:12146-12165 Msa1452560:intron 30.0%
TGTTATAGGTGATTATGAGT+GGG - tig0034029:12147-12166 Msa1452560:intron 30.0%
!! TTTTATTTGGAGACAAGCAA+TGG + tig0034029:12380-12399 None:intergenic 30.0%
! TATCTAGTTCAAACACTACA+TGG - tig0034029:12512-12531 Msa1452560:intron 30.0%
ATGATGTCTCATATTGTTGA+GGG + tig0034029:12597-12616 None:intergenic 30.0%
! ATGTTGGTAAATGAAAGAGT+GGG + tig0034029:13187-13206 None:intergenic 30.0%
! AATGTTGGTAAATGAAAGAG+TGG + tig0034029:13188-13207 None:intergenic 30.0%
AGAAGCTATTAGGAATGATA+TGG + tig0034029:13380-13399 None:intergenic 30.0%
ATATCATTCCTAATAGCTTC+TGG - tig0034029:13379-13398 Msa1452560:CDS 30.0%
!! ATAGAAGAAGTGTTGATAAG+AGG - tig0034029:11395-11414 Msa1452560:three_prime_UTR 30.0%
TAATAACACTGAGCTATATC+AGG + tig0034029:11422-11441 None:intergenic 30.0%
!! TAATGAAGTAGTGGAGTTTT+TGG + tig0034029:11649-11668 None:intergenic 30.0%
!! CATGTCTTTTGCTTTGTTAT+AGG - tig0034029:12133-12152 Msa1452560:intron 30.0%
TTGTTATAGGTGATTATGAG+TGG - tig0034029:12146-12165 Msa1452560:intron 30.0%
TGTTATAGGTGATTATGAGT+GGG - tig0034029:12147-12166 Msa1452560:intron 30.0%
!! TTTTATTTGGAGACAAGCAA+TGG + tig0034029:12380-12399 None:intergenic 30.0%
! TATCTAGTTCAAACACTACA+TGG - tig0034029:12512-12531 Msa1452560:intron 30.0%
ATGATGTCTCATATTGTTGA+GGG + tig0034029:12597-12616 None:intergenic 30.0%
! ATGTTGGTAAATGAAAGAGT+GGG + tig0034029:13187-13206 None:intergenic 30.0%
! AATGTTGGTAAATGAAAGAG+TGG + tig0034029:13188-13207 None:intergenic 30.0%
AGAAGCTATTAGGAATGATA+TGG + tig0034029:13380-13399 None:intergenic 30.0%
ATATCATTCCTAATAGCTTC+TGG - tig0034029:13379-13398 Msa1452560:CDS 30.0%
CATAAGCAAAACATTGCAGA+GGG + tig0034029:11489-11508 None:intergenic 35.0%
!!! TTTTTGCTTTGGAGGAAGAT+TGG + tig0034029:11610-11629 None:intergenic 35.0%
! AATGAAGGTTTTTGCTTTGG+AGG + tig0034029:11618-11637 None:intergenic 35.0%
! AAAGTGCTCCAATTTCATTC+TGG - tig0034029:11868-11887 Msa1452560:intron 35.0%
TTCTTGGGACAAGTATTTGA+AGG - tig0034029:11967-11986 Msa1452560:intron 35.0%
TCTTGGGACAAGTATTTGAA+GGG - tig0034029:11968-11987 Msa1452560:intron 35.0%
GTTATAGGTGATTATGAGTG+GGG - tig0034029:12148-12167 Msa1452560:intron 35.0%
AAGGATGATGCTTTCAAACT+AGG + tig0034029:12460-12479 None:intergenic 35.0%
!! TAGTTTGAAAGCATCATCCT+TGG - tig0034029:12459-12478 Msa1452560:intron 35.0%
!! AGTTTGAAAGCATCATCCTT+GGG - tig0034029:12460-12479 Msa1452560:intron 35.0%
AGATCTTGTTCTTAATCCCA+AGG + tig0034029:12479-12498 None:intergenic 35.0%
GAACAAGATCTACAAGTCTT+AGG - tig0034029:12488-12507 Msa1452560:intron 35.0%
GATGATGTCTCATATTGTTG+AGG + tig0034029:12598-12617 None:intergenic 35.0%
TTCAAGTGTAATGTAGACAC+AGG + tig0034029:12702-12721 None:intergenic 35.0%
TGTGTCTACATTACACTTGA+AGG - tig0034029:12701-12720 Msa1452560:intron 35.0%
TTACACTTGAAGGATCATGA+TGG - tig0034029:12711-12730 Msa1452560:intron 35.0%
ATTTGAGGGCTTACTACAAA+GGG + tig0034029:12850-12869 None:intergenic 35.0%
AATTTGAGGGCTTACTACAA+AGG + tig0034029:12851-12870 None:intergenic 35.0%
AGGAATCTGCTAGAATTTGA+GGG + tig0034029:12864-12883 None:intergenic 35.0%
!! TTTTCAAGAAAGTCAGACCA+AGG - tig0034029:12911-12930 Msa1452560:intron 35.0%
! GACAAACATCCAAACTGTTT+TGG - tig0034029:13044-13063 Msa1452560:CDS 35.0%
GCTAATGGTAGAGATATGAA+AGG + tig0034029:13104-13123 None:intergenic 35.0%
TTATCTTGAGGATTTCCTAC+AGG + tig0034029:13130-13149 None:intergenic 35.0%
AGGAAATCCTCAAGATAACT+TGG - tig0034029:13132-13151 Msa1452560:intron 35.0%
AAATCCTCAAGATAACTTGG+AGG - tig0034029:13135-13154 Msa1452560:intron 35.0%
AATCCTCAAGATAACTTGGA+GGG - tig0034029:13136-13155 Msa1452560:intron 35.0%
TCAGTGATTTAAACTGTTGC+AGG - tig0034029:13307-13326 Msa1452560:CDS 35.0%
ATTTAAACTGTTGCAGGAAG+AGG - tig0034029:13313-13332 Msa1452560:CDS 35.0%
TTCTGGTGTTTGCATTTCAA+TGG - tig0034029:13338-13357 Msa1452560:CDS 35.0%
TTCAATGGATGATGCCAATT+TGG - tig0034029:13353-13372 Msa1452560:CDS 35.0%
TCAATGGATGATGCCAATTT+GGG - tig0034029:13354-13373 Msa1452560:CDS 35.0%
AAATTACTCAAGGGGTTCAA+AGG - tig0034029:13488-13507 Msa1452560:exon 35.0%
CATAAGCAAAACATTGCAGA+GGG + tig0034029:11489-11508 None:intergenic 35.0%
!!! TTTTTGCTTTGGAGGAAGAT+TGG + tig0034029:11610-11629 None:intergenic 35.0%
! AATGAAGGTTTTTGCTTTGG+AGG + tig0034029:11618-11637 None:intergenic 35.0%
! AAAGTGCTCCAATTTCATTC+TGG - tig0034029:11868-11887 Msa1452560:intron 35.0%
TTCTTGGGACAAGTATTTGA+AGG - tig0034029:11967-11986 Msa1452560:intron 35.0%
TCTTGGGACAAGTATTTGAA+GGG - tig0034029:11968-11987 Msa1452560:intron 35.0%
GTTATAGGTGATTATGAGTG+GGG - tig0034029:12148-12167 Msa1452560:intron 35.0%
AAGGATGATGCTTTCAAACT+AGG + tig0034029:12460-12479 None:intergenic 35.0%
!! TAGTTTGAAAGCATCATCCT+TGG - tig0034029:12459-12478 Msa1452560:intron 35.0%
!! AGTTTGAAAGCATCATCCTT+GGG - tig0034029:12460-12479 Msa1452560:intron 35.0%
AGATCTTGTTCTTAATCCCA+AGG + tig0034029:12479-12498 None:intergenic 35.0%
GAACAAGATCTACAAGTCTT+AGG - tig0034029:12488-12507 Msa1452560:intron 35.0%
GATGATGTCTCATATTGTTG+AGG + tig0034029:12598-12617 None:intergenic 35.0%
TTCAAGTGTAATGTAGACAC+AGG + tig0034029:12702-12721 None:intergenic 35.0%
TGTGTCTACATTACACTTGA+AGG - tig0034029:12701-12720 Msa1452560:intron 35.0%
TTACACTTGAAGGATCATGA+TGG - tig0034029:12711-12730 Msa1452560:intron 35.0%
ATTTGAGGGCTTACTACAAA+GGG + tig0034029:12850-12869 None:intergenic 35.0%
AATTTGAGGGCTTACTACAA+AGG + tig0034029:12851-12870 None:intergenic 35.0%
AGGAATCTGCTAGAATTTGA+GGG + tig0034029:12864-12883 None:intergenic 35.0%
!! TTTTCAAGAAAGTCAGACCA+AGG - tig0034029:12911-12930 Msa1452560:intron 35.0%
! GACAAACATCCAAACTGTTT+TGG - tig0034029:13044-13063 Msa1452560:CDS 35.0%
GCTAATGGTAGAGATATGAA+AGG + tig0034029:13104-13123 None:intergenic 35.0%
TTATCTTGAGGATTTCCTAC+AGG + tig0034029:13130-13149 None:intergenic 35.0%
AGGAAATCCTCAAGATAACT+TGG - tig0034029:13132-13151 Msa1452560:intron 35.0%
AAATCCTCAAGATAACTTGG+AGG - tig0034029:13135-13154 Msa1452560:intron 35.0%
AATCCTCAAGATAACTTGGA+GGG - tig0034029:13136-13155 Msa1452560:intron 35.0%
TCAGTGATTTAAACTGTTGC+AGG - tig0034029:13307-13326 Msa1452560:CDS 35.0%
ATTTAAACTGTTGCAGGAAG+AGG - tig0034029:13313-13332 Msa1452560:CDS 35.0%
TTCTGGTGTTTGCATTTCAA+TGG - tig0034029:13338-13357 Msa1452560:CDS 35.0%
TTCAATGGATGATGCCAATT+TGG - tig0034029:13353-13372 Msa1452560:CDS 35.0%
TCAATGGATGATGCCAATTT+GGG - tig0034029:13354-13373 Msa1452560:CDS 35.0%
AAATTACTCAAGGGGTTCAA+AGG - tig0034029:13488-13507 Msa1452560:exon 35.0%
GCATAAGCAAAACATTGCAG+AGG + tig0034029:11490-11509 None:intergenic 40.0%
!! TTGGTTTGTTTGGGTGAAGA+AGG + tig0034029:11591-11610 None:intergenic 40.0%
!! GGAGGAAGATTGGTTTGTTT+GGG + tig0034029:11600-11619 None:intergenic 40.0%
!! TGGAGGAAGATTGGTTTGTT+TGG + tig0034029:11601-11620 None:intergenic 40.0%
GTTTGGAGGTAATGAAGTAG+TGG + tig0034029:11658-11677 None:intergenic 40.0%
TCAATTTGCATGAGCGAAGA+TGG + tig0034029:11702-11721 None:intergenic 40.0%
AAACAGACAGAGCATACTTG+AGG + tig0034029:11767-11786 None:intergenic 40.0%
! ACCACGATGGATTTGTTCTT+GGG - tig0034029:11952-11971 Msa1452560:intron 40.0%
! TTGCTACTTACTGGTGTTAG+TGG + tig0034029:12061-12080 None:intergenic 40.0%
ACAGAATTGGTGAGAACCTT+TGG + tig0034029:12672-12691 None:intergenic 40.0%
TTTGACCATTGTCCAACCAA+GGG - tig0034029:12774-12793 Msa1452560:intron 40.0%
TTTGAGGGCTTACTACAAAG+GGG + tig0034029:12849-12868 None:intergenic 40.0%
GAGGAATCTGCTAGAATTTG+AGG + tig0034029:12865-12884 None:intergenic 40.0%
AATTGGTCACACAATACGGA+GGG + tig0034029:12888-12907 None:intergenic 40.0%
TAATTGGTCACACAATACGG+AGG + tig0034029:12889-12908 None:intergenic 40.0%
ATGTTGTCGAGGAATGTTCA+AGG + tig0034029:12948-12967 None:intergenic 40.0%
TTCCTCGACAACATAGAATC+CGG - tig0034029:12954-12973 Msa1452560:CDS 40.0%
ACCTTCAACATAGCAAATCC+TGG + tig0034029:13008-13027 None:intergenic 40.0%
!!! ACATCCAAACTGTTTTGGCA+TGG - tig0034029:13049-13068 Msa1452560:CDS 40.0%
CTATCCATGCCAAAACAGTT+TGG + tig0034029:13056-13075 None:intergenic 40.0%
! ATTTCCTACAGGTTGGCTAA+TGG + tig0034029:13119-13138 None:intergenic 40.0%
ATACCCTCCAAGTTATCTTG+AGG + tig0034029:13142-13161 None:intergenic 40.0%
AGGAATGATATGGCCCAAAT+TGG + tig0034029:13370-13389 None:intergenic 40.0%
TGATGACTCCAGAAGCTATT+AGG + tig0034029:13390-13409 None:intergenic 40.0%
TCAAGAAAAGGGACACTGAA+TGG + tig0034029:13418-13437 None:intergenic 40.0%
GAAGGAGGTCATCAAGAAAA+GGG + tig0034029:13429-13448 None:intergenic 40.0%
AGAAGGAGGTCATCAAGAAA+AGG + tig0034029:13430-13449 None:intergenic 40.0%
AGAAACTGGATGTTCACAGA+AGG + tig0034029:13447-13466 None:intergenic 40.0%
GCATAAGCAAAACATTGCAG+AGG + tig0034029:11490-11509 None:intergenic 40.0%
!! TTGGTTTGTTTGGGTGAAGA+AGG + tig0034029:11591-11610 None:intergenic 40.0%
!! GGAGGAAGATTGGTTTGTTT+GGG + tig0034029:11600-11619 None:intergenic 40.0%
!! TGGAGGAAGATTGGTTTGTT+TGG + tig0034029:11601-11620 None:intergenic 40.0%
GTTTGGAGGTAATGAAGTAG+TGG + tig0034029:11658-11677 None:intergenic 40.0%
TCAATTTGCATGAGCGAAGA+TGG + tig0034029:11702-11721 None:intergenic 40.0%
AAACAGACAGAGCATACTTG+AGG + tig0034029:11767-11786 None:intergenic 40.0%
! ACCACGATGGATTTGTTCTT+GGG - tig0034029:11952-11971 Msa1452560:intron 40.0%
! TTGCTACTTACTGGTGTTAG+TGG + tig0034029:12061-12080 None:intergenic 40.0%
ACAGAATTGGTGAGAACCTT+TGG + tig0034029:12672-12691 None:intergenic 40.0%
TTTGACCATTGTCCAACCAA+GGG - tig0034029:12774-12793 Msa1452560:intron 40.0%
TTTGAGGGCTTACTACAAAG+GGG + tig0034029:12849-12868 None:intergenic 40.0%
GAGGAATCTGCTAGAATTTG+AGG + tig0034029:12865-12884 None:intergenic 40.0%
AATTGGTCACACAATACGGA+GGG + tig0034029:12888-12907 None:intergenic 40.0%
TAATTGGTCACACAATACGG+AGG + tig0034029:12889-12908 None:intergenic 40.0%
ATGTTGTCGAGGAATGTTCA+AGG + tig0034029:12948-12967 None:intergenic 40.0%
TTCCTCGACAACATAGAATC+CGG - tig0034029:12954-12973 Msa1452560:CDS 40.0%
ACCTTCAACATAGCAAATCC+TGG + tig0034029:13008-13027 None:intergenic 40.0%
!!! ACATCCAAACTGTTTTGGCA+TGG - tig0034029:13049-13068 Msa1452560:CDS 40.0%
CTATCCATGCCAAAACAGTT+TGG + tig0034029:13056-13075 None:intergenic 40.0%
! ATTTCCTACAGGTTGGCTAA+TGG + tig0034029:13119-13138 None:intergenic 40.0%
ATACCCTCCAAGTTATCTTG+AGG + tig0034029:13142-13161 None:intergenic 40.0%
AGGAATGATATGGCCCAAAT+TGG + tig0034029:13370-13389 None:intergenic 40.0%
TGATGACTCCAGAAGCTATT+AGG + tig0034029:13390-13409 None:intergenic 40.0%
TCAAGAAAAGGGACACTGAA+TGG + tig0034029:13418-13437 None:intergenic 40.0%
GAAGGAGGTCATCAAGAAAA+GGG + tig0034029:13429-13448 None:intergenic 40.0%
AGAAGGAGGTCATCAAGAAA+AGG + tig0034029:13430-13449 None:intergenic 40.0%
AGAAACTGGATGTTCACAGA+AGG + tig0034029:13447-13466 None:intergenic 40.0%
! AGGAGGAGAATCTGGGTTTT+GGG + tig0034029:11562-11581 None:intergenic 45.0%
GTTTGTTTGGGTGAAGAAGG+AGG + tig0034029:11588-11607 None:intergenic 45.0%
ATGCAAATTGAACGTGCCCT+TGG - tig0034029:11711-11730 Msa1452560:intron 45.0%
AGACGTAAAGAAGACCACGA+TGG - tig0034029:11939-11958 Msa1452560:intron 45.0%
! GACCACGATGGATTTGTTCT+TGG - tig0034029:11951-11970 Msa1452560:intron 45.0%
TCCCAAGAACAAATCCATCG+TGG + tig0034029:11956-11975 None:intergenic 45.0%
GACTGTGCAGAAAAAGCTGA+GGG - tig0034029:11990-12009 Msa1452560:intron 45.0%
CAGAAAAAGCTGAGGGAAAC+AGG - tig0034029:11997-12016 Msa1452560:intron 45.0%
ACCAGTAAGTAGCAAGCAAC+TGG - tig0034029:12066-12085 Msa1452560:intron 45.0%
! ACCAGTTGCTTGCTACTTAC+TGG + tig0034029:12070-12089 None:intergenic 45.0%
ACGAGGCCTTTGCTAAATTG+TGG - tig0034029:12347-12366 Msa1452560:intron 45.0%
CGAGGCCTTTGCTAAATTGT+GGG - tig0034029:12348-12367 Msa1452560:intron 45.0%
ATTGTTGAGGGAGAGGCAAT+AGG + tig0034029:12585-12604 None:intergenic 45.0%
GTCTCATATTGTTGAGGGAG+AGG + tig0034029:12592-12611 None:intergenic 45.0%
TTCTCTGATGCACTTGCCAA+AGG - tig0034029:12653-12672 Msa1452560:intron 45.0%
TTCCAGATGCAAAGTTGAGC+AGG - tig0034029:12751-12770 Msa1452560:intron 45.0%
AACCTGCTCAACTTTGCATC+TGG + tig0034029:12756-12775 None:intergenic 45.0%
GTTTGACCATTGTCCAACCA+AGG - tig0034029:12773-12792 Msa1452560:intron 45.0%
TTGACCATTGTCCAACCAAG+GGG - tig0034029:12775-12794 Msa1452560:intron 45.0%
ATTGGTCACACAATACGGAG+GGG + tig0034029:12887-12906 None:intergenic 45.0%
GTCAGACCAAGGAAAATACC+TGG - tig0034029:12922-12941 Msa1452560:intron 45.0%
! TCAAGGCCAGGTATTTTCCT+TGG + tig0034029:12931-12950 None:intergenic 45.0%
TCCTCGACAACATAGAATCC+GGG - tig0034029:12955-12974 Msa1452560:CDS 45.0%
CTCAAGGTTTATCATGCACC+CGG + tig0034029:12976-12995 None:intergenic 45.0%
!! GCCAGGATTTGCTATGTTGA+AGG - tig0034029:13004-13023 Msa1452560:CDS 45.0%
TCTACCATTAGCCAACCTGT+AGG - tig0034029:13112-13131 Msa1452560:intron 45.0%
CTTGAGGATTTCCTACAGGT+TGG + tig0034029:13126-13145 None:intergenic 45.0%
TGTTGCAGGAAGAGGAATTC+TGG - tig0034029:13321-13340 Msa1452560:CDS 45.0%
AACTGGATGTTCACAGAAGG+AGG + tig0034029:13444-13463 None:intergenic 45.0%
! AGGAGGAGAATCTGGGTTTT+GGG + tig0034029:11562-11581 None:intergenic 45.0%
GTTTGTTTGGGTGAAGAAGG+AGG + tig0034029:11588-11607 None:intergenic 45.0%
ATGCAAATTGAACGTGCCCT+TGG - tig0034029:11711-11730 Msa1452560:intron 45.0%
AGACGTAAAGAAGACCACGA+TGG - tig0034029:11939-11958 Msa1452560:intron 45.0%
! GACCACGATGGATTTGTTCT+TGG - tig0034029:11951-11970 Msa1452560:intron 45.0%
TCCCAAGAACAAATCCATCG+TGG + tig0034029:11956-11975 None:intergenic 45.0%
GACTGTGCAGAAAAAGCTGA+GGG - tig0034029:11990-12009 Msa1452560:intron 45.0%
CAGAAAAAGCTGAGGGAAAC+AGG - tig0034029:11997-12016 Msa1452560:intron 45.0%
ACCAGTAAGTAGCAAGCAAC+TGG - tig0034029:12066-12085 Msa1452560:intron 45.0%
! ACCAGTTGCTTGCTACTTAC+TGG + tig0034029:12070-12089 None:intergenic 45.0%
ACGAGGCCTTTGCTAAATTG+TGG - tig0034029:12347-12366 Msa1452560:intron 45.0%
CGAGGCCTTTGCTAAATTGT+GGG - tig0034029:12348-12367 Msa1452560:intron 45.0%
ATTGTTGAGGGAGAGGCAAT+AGG + tig0034029:12585-12604 None:intergenic 45.0%
GTCTCATATTGTTGAGGGAG+AGG + tig0034029:12592-12611 None:intergenic 45.0%
TTCTCTGATGCACTTGCCAA+AGG - tig0034029:12653-12672 Msa1452560:intron 45.0%
TTCCAGATGCAAAGTTGAGC+AGG - tig0034029:12751-12770 Msa1452560:intron 45.0%
AACCTGCTCAACTTTGCATC+TGG + tig0034029:12756-12775 None:intergenic 45.0%
GTTTGACCATTGTCCAACCA+AGG - tig0034029:12773-12792 Msa1452560:intron 45.0%
TTGACCATTGTCCAACCAAG+GGG - tig0034029:12775-12794 Msa1452560:intron 45.0%
ATTGGTCACACAATACGGAG+GGG + tig0034029:12887-12906 None:intergenic 45.0%
GTCAGACCAAGGAAAATACC+TGG - tig0034029:12922-12941 Msa1452560:intron 45.0%
! TCAAGGCCAGGTATTTTCCT+TGG + tig0034029:12931-12950 None:intergenic 45.0%
TCCTCGACAACATAGAATCC+GGG - tig0034029:12955-12974 Msa1452560:CDS 45.0%
CTCAAGGTTTATCATGCACC+CGG + tig0034029:12976-12995 None:intergenic 45.0%
!! GCCAGGATTTGCTATGTTGA+AGG - tig0034029:13004-13023 Msa1452560:CDS 45.0%
TCTACCATTAGCCAACCTGT+AGG - tig0034029:13112-13131 Msa1452560:intron 45.0%
CTTGAGGATTTCCTACAGGT+TGG + tig0034029:13126-13145 None:intergenic 45.0%
TGTTGCAGGAAGAGGAATTC+TGG - tig0034029:13321-13340 Msa1452560:CDS 45.0%
AACTGGATGTTCACAGAAGG+AGG + tig0034029:13444-13463 None:intergenic 45.0%
! GGAGGAGAATCTGGGTTTTG+GGG + tig0034029:11561-11580 None:intergenic 50.0%
! GAGGAGGAGAATCTGGGTTT+TGG + tig0034029:11563-11582 None:intergenic 50.0%
TGTTTGGGTGAAGAAGGAGG+AGG + tig0034029:11585-11604 None:intergenic 50.0%
TGCATGAGCGAAGATGGTGA+TGG + tig0034029:11696-11715 None:intergenic 50.0%
GACAGAGCATACTTGAGGTC+AGG + tig0034029:11762-11781 None:intergenic 50.0%
GGACTGTGCAGAAAAAGCTG+AGG - tig0034029:11989-12008 Msa1452560:intron 50.0%
GAGAGTGGCTGGGTGAAAAT+GGG - tig0034029:12019-12038 Msa1452560:intron 50.0%
AGAGTGGCTGGGTGAAAATG+GGG - tig0034029:12020-12039 Msa1452560:intron 50.0%
GGTGTTAGTGGAGCGAAATC+TGG + tig0034029:12049-12068 None:intergenic 50.0%
! GAGACTAGCTGATGAAGACG+AGG - tig0034029:12330-12349 Msa1452560:intron 50.0%
CGAGGCCCACAATTTAGCAA+AGG + tig0034029:12356-12375 None:intergenic 50.0%
TTGGAGACAAGCAATGGACG+AGG + tig0034029:12374-12393 None:intergenic 50.0%
!! TTGTGTTGGGTGGTTGGCTT+GGG + tig0034029:12544-12563 None:intergenic 50.0%
! ATTGTGTTGGGTGGTTGGCT+TGG + tig0034029:12545-12564 None:intergenic 50.0%
CAACCACCCAACACAATGCA+GGG - tig0034029:12548-12567 Msa1452560:intron 50.0%
TGAAGGCCCTGCATTGTGTT+GGG + tig0034029:12557-12576 None:intergenic 50.0%
AGAGGCAATAGGTCTGCTGA+AGG + tig0034029:12574-12593 None:intergenic 50.0%
AGTGCATCAGAGAAGAGACG+CGG + tig0034029:12647-12666 None:intergenic 50.0%
CACAGGCTGCAACACAGAAT+TGG + tig0034029:12685-12704 None:intergenic 50.0%
TGACCATTGTCCAACCAAGG+GGG - tig0034029:12776-12795 Msa1452560:intron 50.0%
! ATTTAAGACCCCCCCTTGGT+TGG + tig0034029:12789-12808 None:intergenic 50.0%
ACCAAGGGGGGGTCTTAAAT+TGG - tig0034029:12789-12808 Msa1452560:intron 50.0%
CCAAGGGGGGGTCTTAAATT+GGG - tig0034029:12790-12809 Msa1452560:intron 50.0%
ACCCGGATTCTATGTTGTCG+AGG + tig0034029:12959-12978 None:intergenic 50.0%
CGGGTGCATGATAAACCTTG+AGG - tig0034029:12974-12993 Msa1452560:CDS 50.0%
! AACCTTGAGGCTTGTTTGCC+AGG - tig0034029:12987-13006 Msa1452560:CDS 50.0%
ATCCTGGCAAACAAGCCTCA+AGG + tig0034029:12992-13011 None:intergenic 50.0%
! GGAGGAGAATCTGGGTTTTG+GGG + tig0034029:11561-11580 None:intergenic 50.0%
! GAGGAGGAGAATCTGGGTTT+TGG + tig0034029:11563-11582 None:intergenic 50.0%
TGTTTGGGTGAAGAAGGAGG+AGG + tig0034029:11585-11604 None:intergenic 50.0%
TGCATGAGCGAAGATGGTGA+TGG + tig0034029:11696-11715 None:intergenic 50.0%
GACAGAGCATACTTGAGGTC+AGG + tig0034029:11762-11781 None:intergenic 50.0%
GGACTGTGCAGAAAAAGCTG+AGG - tig0034029:11989-12008 Msa1452560:intron 50.0%
GAGAGTGGCTGGGTGAAAAT+GGG - tig0034029:12019-12038 Msa1452560:intron 50.0%
AGAGTGGCTGGGTGAAAATG+GGG - tig0034029:12020-12039 Msa1452560:intron 50.0%
GGTGTTAGTGGAGCGAAATC+TGG + tig0034029:12049-12068 None:intergenic 50.0%
! GAGACTAGCTGATGAAGACG+AGG - tig0034029:12330-12349 Msa1452560:intron 50.0%
CGAGGCCCACAATTTAGCAA+AGG + tig0034029:12356-12375 None:intergenic 50.0%
TTGGAGACAAGCAATGGACG+AGG + tig0034029:12374-12393 None:intergenic 50.0%
!! TTGTGTTGGGTGGTTGGCTT+GGG + tig0034029:12544-12563 None:intergenic 50.0%
! ATTGTGTTGGGTGGTTGGCT+TGG + tig0034029:12545-12564 None:intergenic 50.0%
CAACCACCCAACACAATGCA+GGG - tig0034029:12548-12567 Msa1452560:intron 50.0%
TGAAGGCCCTGCATTGTGTT+GGG + tig0034029:12557-12576 None:intergenic 50.0%
AGAGGCAATAGGTCTGCTGA+AGG + tig0034029:12574-12593 None:intergenic 50.0%
AGTGCATCAGAGAAGAGACG+CGG + tig0034029:12647-12666 None:intergenic 50.0%
CACAGGCTGCAACACAGAAT+TGG + tig0034029:12685-12704 None:intergenic 50.0%
TGACCATTGTCCAACCAAGG+GGG - tig0034029:12776-12795 Msa1452560:intron 50.0%
! ATTTAAGACCCCCCCTTGGT+TGG + tig0034029:12789-12808 None:intergenic 50.0%
ACCAAGGGGGGGTCTTAAAT+TGG - tig0034029:12789-12808 Msa1452560:intron 50.0%
CCAAGGGGGGGTCTTAAATT+GGG - tig0034029:12790-12809 Msa1452560:intron 50.0%
ACCCGGATTCTATGTTGTCG+AGG + tig0034029:12959-12978 None:intergenic 50.0%
CGGGTGCATGATAAACCTTG+AGG - tig0034029:12974-12993 Msa1452560:CDS 50.0%
! AACCTTGAGGCTTGTTTGCC+AGG - tig0034029:12987-13006 Msa1452560:CDS 50.0%
ATCCTGGCAAACAAGCCTCA+AGG + tig0034029:12992-13011 None:intergenic 50.0%
GAGGAGGAGGAGGAGAATCT+GGG + tig0034029:11569-11588 None:intergenic 55.0%
TTGGGTGAAGAAGGAGGAGG+AGG + tig0034029:11582-11601 None:intergenic 55.0%
!! GAAGATGGTGATGGTCGACG+GGG + tig0034029:11687-11706 None:intergenic 55.0%
!! CGAAGATGGTGATGGTCGAC+GGG + tig0034029:11688-11707 None:intergenic 55.0%
!! GCGAAGATGGTGATGGTCGA+CGG + tig0034029:11689-11708 None:intergenic 55.0%
! TCTGAAGCTACCAGCGCCAA+GGG + tig0034029:11730-11749 None:intergenic 55.0%
AGCTGAGGGAAACAGGAGAG+TGG - tig0034029:12004-12023 Msa1452560:intron 55.0%
AGGGAAACAGGAGAGTGGCT+GGG - tig0034029:12009-12028 Msa1452560:intron 55.0%
GGAGAGTGGCTGGGTGAAAA+TGG - tig0034029:12018-12037 Msa1452560:intron 55.0%
CCTGCATTGTGTTGGGTGGT+TGG + tig0034029:12550-12569 None:intergenic 55.0%
CCAACCACCCAACACAATGC+AGG - tig0034029:12547-12566 Msa1452560:intron 55.0%
CTGAAGGCCCTGCATTGTGT+TGG + tig0034029:12558-12577 None:intergenic 55.0%
GACCATTGTCCAACCAAGGG+GGG - tig0034029:12777-12796 Msa1452560:intron 55.0%
ACCATTGTCCAACCAAGGGG+GGG - tig0034029:12778-12797 Msa1452560:intron 55.0%
! CCCAATTTAAGACCCCCCCT+TGG + tig0034029:12793-12812 None:intergenic 55.0%
GTCGAGGAATGTTCAAGGCC+AGG + tig0034029:12943-12962 None:intergenic 55.0%
GAGGAGGAGGAGGAGAATCT+GGG + tig0034029:11569-11588 None:intergenic 55.0%
TTGGGTGAAGAAGGAGGAGG+AGG + tig0034029:11582-11601 None:intergenic 55.0%
!! GAAGATGGTGATGGTCGACG+GGG + tig0034029:11687-11706 None:intergenic 55.0%
!! CGAAGATGGTGATGGTCGAC+GGG + tig0034029:11688-11707 None:intergenic 55.0%
!! GCGAAGATGGTGATGGTCGA+CGG + tig0034029:11689-11708 None:intergenic 55.0%
! TCTGAAGCTACCAGCGCCAA+GGG + tig0034029:11730-11749 None:intergenic 55.0%
AGCTGAGGGAAACAGGAGAG+TGG - tig0034029:12004-12023 Msa1452560:intron 55.0%
AGGGAAACAGGAGAGTGGCT+GGG - tig0034029:12009-12028 Msa1452560:intron 55.0%
GGAGAGTGGCTGGGTGAAAA+TGG - tig0034029:12018-12037 Msa1452560:intron 55.0%
CCTGCATTGTGTTGGGTGGT+TGG + tig0034029:12550-12569 None:intergenic 55.0%
CCAACCACCCAACACAATGC+AGG - tig0034029:12547-12566 Msa1452560:intron 55.0%
CTGAAGGCCCTGCATTGTGT+TGG + tig0034029:12558-12577 None:intergenic 55.0%
GACCATTGTCCAACCAAGGG+GGG - tig0034029:12777-12796 Msa1452560:intron 55.0%
ACCATTGTCCAACCAAGGGG+GGG - tig0034029:12778-12797 Msa1452560:intron 55.0%
! CCCAATTTAAGACCCCCCCT+TGG + tig0034029:12793-12812 None:intergenic 55.0%
GTCGAGGAATGTTCAAGGCC+AGG + tig0034029:12943-12962 None:intergenic 55.0%
GGAGGAGGAGGAGGAGAATC+TGG + tig0034029:11570-11589 None:intergenic 60.0%
GGTGAAGAAGGAGGAGGAGG+AGG + tig0034029:11579-11598 None:intergenic 60.0%
! CGACGGGGAAGCTTGTTTGG+AGG + tig0034029:11672-11691 None:intergenic 60.0%
! GGTCGACGGGGAAGCTTGTT+TGG + tig0034029:11675-11694 None:intergenic 60.0%
ATTGAACGTGCCCTTGGCGC+TGG - tig0034029:11717-11736 Msa1452560:intron 60.0%
!! CTCTGAAGCTACCAGCGCCA+AGG + tig0034029:11731-11750 None:intergenic 60.0%
!! GGCGCTGGTAGCTTCAGAGA+CGG - tig0034029:11732-11751 Msa1452560:intron 60.0%
GAGGGAAACAGGAGAGTGGC+TGG - tig0034029:12008-12027 Msa1452560:intron 60.0%
AGGCCCTGCATTGTGTTGGG+TGG + tig0034029:12554-12573 None:intergenic 60.0%
ACCCCCCCTTGGTTGGACAA+TGG + tig0034029:12782-12801 None:intergenic 60.0%
GGTCACACAATACGGAGGGG+AGG + tig0034029:12884-12903 None:intergenic 60.0%
GGAGGAGGAGGAGGAGAATC+TGG + tig0034029:11570-11589 None:intergenic 60.0%
GGTGAAGAAGGAGGAGGAGG+AGG + tig0034029:11579-11598 None:intergenic 60.0%
! CGACGGGGAAGCTTGTTTGG+AGG + tig0034029:11672-11691 None:intergenic 60.0%
! GGTCGACGGGGAAGCTTGTT+TGG + tig0034029:11675-11694 None:intergenic 60.0%
ATTGAACGTGCCCTTGGCGC+TGG - tig0034029:11717-11736 Msa1452560:intron 60.0%
!! CTCTGAAGCTACCAGCGCCA+AGG + tig0034029:11731-11750 None:intergenic 60.0%
!! GGCGCTGGTAGCTTCAGAGA+CGG - tig0034029:11732-11751 Msa1452560:intron 60.0%
GAGGGAAACAGGAGAGTGGC+TGG - tig0034029:12008-12027 Msa1452560:intron 60.0%
AGGCCCTGCATTGTGTTGGG+TGG + tig0034029:12554-12573 None:intergenic 60.0%
ACCCCCCCTTGGTTGGACAA+TGG + tig0034029:12782-12801 None:intergenic 60.0%
GGTCACACAATACGGAGGGG+AGG + tig0034029:12884-12903 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0034029 gene 11374 13627 11374 ID=Msa1452560;Name=Msa1452560
tig0034029 mRNA 11374 13627 11374 ID=Msa1452560-mRNA-1;Parent=Msa1452560;Name=Msa1452560-mRNA-1;_AED=0.06;_eAED=0.06;_QI=121|1|1|1|1|1|3|174|181
tig0034029 exon 11374 11672 11374 ID=Msa1452560-mRNA-1:exon:18689;Parent=Msa1452560-mRNA-1
tig0034029 exon 12932 13077 12932 ID=Msa1452560-mRNA-1:exon:18688;Parent=Msa1452560-mRNA-1
tig0034029 exon 13232 13627 13232 ID=Msa1452560-mRNA-1:exon:18687;Parent=Msa1452560-mRNA-1
tig0034029 five_prime_UTR 13507 13627 13507 ID=Msa1452560-mRNA-1:five_prime_utr;Parent=Msa1452560-mRNA-1
tig0034029 CDS 13232 13506 13232 ID=Msa1452560-mRNA-1:cds;Parent=Msa1452560-mRNA-1
tig0034029 CDS 12932 13077 12932 ID=Msa1452560-mRNA-1:cds;Parent=Msa1452560-mRNA-1
tig0034029 CDS 11548 11672 11548 ID=Msa1452560-mRNA-1:cds;Parent=Msa1452560-mRNA-1
tig0034029 three_prime_UTR 11374 11547 11374 ID=Msa1452560-mRNA-1:three_prime_utr;Parent=Msa1452560-mRNA-1
Gene Sequence

>Msa1452560

ATGTTTTGCTTATGCAACAATCTTTCTATAACCAAATCCATTCTTATTACTAATGCAACTCTTCCCCAAAACCCAGATTCTCCTCCTCCTCCTCCTTCTTCACCCAAACAAACCAATCTTCCTCCAAAGCAAAAACCTTCATTTATAAGCTCCAAAAACTCCACTACTTCATTACCTCCAAACAAGCTTCCCCGTCGACCATCACCATCTTCGCTCATGCAAATTGAACGTGCCCTTGGCGCTGGTAGCTTCAGAGACGGTGAACCTGACCTCAAAATGAAGAACGATTCAGACGTAAAGAAGACCACGATGGATTTGTTCTTGGGACAAGTATTTGAAGGGACTGTGCAGAAAAAGCTGAGGGAAACAGGAGAGTGGCTGGGTGAAAATGGGGAGACCAGATTTCGCTCCACTAACACCAGAAGAGGAATTCTGGTGTTTGCATTTCAATGGATGATGCCAATTTGGGCCATATCATTCCTAATAGCTTCTGGAGTCATCAAATTACCATTCAGTGTCCCTTTTCTTGATGACCTCCTTCTGTGA

Protein sequence

>Msa1452560

MFCLCNNLSITKSILITNATLPQNPDSPPPPPSSPKQTNLPPKQKPSFISSKNSTTSLPPNKLPRRPSPSSLMQIERALGAGSFRDGEPDLKMKNDSDVKKTTMDLFLGQVFEGTVQKKLRETGEWLGENGETRFRSTNTRRGILVFAFQWMMPIWAISFLIASGVIKLPFSVPFLDDLLL*