Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0926240 | XP_013453188.1 | 98.790 | 496 | 6 | 0 | 1 | 496 | 1 | 496 | 0.0 | 993 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0926240 | sp|Q42525|HXK1_ARATH | 71.002 | 469 | 136 | 0 | 23 | 491 | 25 | 493 | 0.0 | 707 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0073210 | Msa0926240 | 0.807841 | 4.150794e-50 | -8.615850e-47 |
| Msa0101530 | Msa0926240 | 0.811930 | 5.471024e-51 | -8.615850e-47 |
| Msa0620080 | Msa0926240 | 0.816636 | 4.994041e-52 | -8.615850e-47 |
| Msa0652160 | Msa0926240 | 0.803579 | 3.259137e-49 | -8.615850e-47 |
| Msa0658120 | Msa0926240 | 0.811677 | 6.212262e-51 | -8.615850e-47 |
| Msa0660150 | Msa0926240 | 0.813623 | 2.330314e-51 | -8.615850e-47 |
| Msa0685390 | Msa0926240 | -0.800054 | 1.725587e-48 | -8.615850e-47 |
| Msa0687220 | Msa0926240 | 0.803418 | 3.518870e-49 | -8.615850e-47 |
| Msa0700120 | Msa0926240 | 0.807656 | 4.544365e-50 | -8.615850e-47 |
| Msa0700410 | Msa0926240 | 0.817148 | 3.831703e-52 | -8.615850e-47 |
| Msa0702970 | Msa0926240 | 0.804246 | 2.368604e-49 | -8.615850e-47 |
| Msa0707360 | Msa0926240 | 0.801099 | 1.056376e-48 | -8.615850e-47 |
| Msa0805390 | Msa0926240 | 0.804683 | 1.919975e-49 | -8.615850e-47 |
| Msa0192050 | Msa0926240 | 0.800445 | 1.436250e-48 | -8.615850e-47 |
| Msa0368640 | Msa0926240 | 0.808050 | 3.746733e-50 | -8.615850e-47 |
| Msa0373550 | Msa0926240 | 0.849350 | 3.421284e-60 | -8.615850e-47 |
| Msa0416030 | Msa0926240 | 0.803109 | 4.077768e-49 | -8.615850e-47 |
| Msa0422070 | Msa0926240 | 0.843103 | 1.721111e-58 | -8.615850e-47 |
| Msa0468660 | Msa0926240 | 0.862819 | 3.868783e-64 | -8.615850e-47 |
| Msa0480280 | Msa0926240 | 0.831384 | 1.721217e-55 | -8.615850e-47 |
| Msa0242720 | Msa0926240 | 0.818739 | 1.675004e-52 | -8.615850e-47 |
| Msa0495620 | Msa0926240 | 0.800503 | 1.397736e-48 | -8.615850e-47 |
| Msa0514540 | Msa0926240 | 0.832361 | 9.875944e-56 | -8.615850e-47 |
| Msa0550100 | Msa0926240 | 0.836986 | 6.783608e-57 | -8.615850e-47 |
| Msa0566460 | Msa0926240 | 0.812772 | 3.583919e-51 | -8.615850e-47 |
| Msa0579080 | Msa0926240 | 0.811477 | 6.865930e-51 | -8.615850e-47 |
| Msa0852890 | Msa0926240 | 0.801420 | 9.079126e-49 | -8.615850e-47 |
| Msa0882370 | Msa0926240 | 0.805777 | 1.133389e-49 | -8.615850e-47 |
| Msa0900830 | Msa0926240 | 0.937585 | 2.727309e-98 | -8.615850e-47 |
| Msa0926240 | Msa0965800 | 0.964211 | 4.831764e-123 | -8.615850e-47 |
| Msa0926240 | Msa0966120 | 0.815682 | 8.157199e-52 | -8.615850e-47 |
| Msa0926240 | Msa1001620 | 0.806461 | 8.135843e-50 | -8.615850e-47 |
| Msa0926240 | Msa1011800 | 0.827960 | 1.171820e-54 | -8.615850e-47 |
| Msa0926240 | Msa1053310 | 0.821187 | 4.613434e-53 | -8.615850e-47 |
| Msa0926240 | Msa1053340 | 0.842462 | 2.548976e-58 | -8.615850e-47 |
| Msa0926240 | Msa1095410 | 0.814835 | 1.258100e-51 | -8.615850e-47 |
| Msa0926240 | Msa1132850 | 0.808351 | 3.232350e-50 | -8.615850e-47 |
| Msa0926240 | Msa1142590 | 0.838676 | 2.496227e-57 | -8.615850e-47 |
| Msa0926240 | Msa1146980 | 0.819051 | 1.422479e-52 | -8.615850e-47 |
| Msa0926240 | Msa1165460 | 0.803412 | 3.529454e-49 | -8.615850e-47 |
| Msa0926240 | Msa1186670 | 0.810969 | 8.846978e-51 | -8.615850e-47 |
| Msa0926240 | Msa1197720 | 0.834135 | 3.569509e-56 | -8.615850e-47 |
| Msa0926240 | Msa1220580 | 0.805396 | 1.362040e-49 | -8.615850e-47 |
| Msa0926240 | Msa1251410 | 0.838641 | 2.548993e-57 | -8.615850e-47 |
| Msa0926240 | Msa1334560 | 0.803215 | 3.877328e-49 | -8.615850e-47 |
| Msa0926240 | Msa1395050 | 0.820230 | 7.656874e-53 | -8.615850e-47 |
| Msa0926240 | Msa1403940 | 0.811690 | 6.172072e-51 | -8.615850e-47 |
| Msa0926240 | Msa1434300 | 0.800247 | 1.575946e-48 | -8.615850e-47 |
| Msa0926240 | Msa1462780 | 0.821084 | 4.872345e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0926240 | MtrunA17_Chr6g0487071 | 98.790 | 496 | 6 | 0 | 1 | 496 | 1 | 496 | 0.0 | 993 |
| Msa0926240 | MtrunA17_Chr8g0389821 | 78.755 | 466 | 99 | 0 | 31 | 496 | 33 | 498 | 0.0 | 770 |
| Msa0926240 | MtrunA17_Chr8g0340741 | 67.748 | 493 | 156 | 2 | 1 | 491 | 1 | 492 | 0.0 | 682 |
| Msa0926240 | MtrunA17_Chr1g0156571 | 55.507 | 454 | 200 | 2 | 37 | 490 | 41 | 492 | 2.60e-173 | 497 |
| Msa0926240 | MtrunA17_Chr5g0396421 | 53.319 | 467 | 206 | 4 | 31 | 488 | 33 | 496 | 2.61e-168 | 484 |
| Msa0926240 | MtrunA17_Chr4g0054541 | 51.429 | 175 | 78 | 3 | 218 | 391 | 1 | 169 | 8.23e-54 | 178 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0926240 | AT4G29130.1 | 71.002 | 469 | 136 | 0 | 23 | 491 | 25 | 493 | 0.0 | 707 |
| Msa0926240 | AT2G19860.1 | 68.922 | 473 | 147 | 0 | 23 | 495 | 25 | 497 | 0.0 | 694 |
| Msa0926240 | AT2G19860.2 | 69.072 | 388 | 120 | 0 | 108 | 495 | 1 | 388 | 0.0 | 574 |
| Msa0926240 | AT1G47840.1 | 51.542 | 454 | 216 | 4 | 38 | 490 | 43 | 493 | 5.19e-158 | 458 |
| Msa0926240 | AT1G50460.1 | 50.215 | 466 | 219 | 5 | 31 | 486 | 33 | 495 | 1.31e-157 | 457 |
| Msa0926240 | AT3G20040.1 | 49.471 | 473 | 230 | 4 | 23 | 488 | 25 | 495 | 1.76e-147 | 432 |
| Msa0926240 | AT1G50460.3 | 49.507 | 406 | 192 | 5 | 91 | 486 | 17 | 419 | 2.91e-131 | 387 |
| Msa0926240 | AT4G37840.1 | 44.681 | 470 | 234 | 6 | 30 | 485 | 25 | 482 | 6.34e-123 | 369 |
| Msa0926240 | AT1G50460.2 | 52.615 | 325 | 152 | 2 | 31 | 355 | 33 | 355 | 4.52e-116 | 346 |
| Msa0926240 | AT1G47840.2 | 55.346 | 318 | 139 | 3 | 38 | 354 | 43 | 358 | 2.12e-115 | 345 |
| Msa0926240 | AT1G47845.1 | 46.541 | 159 | 80 | 4 | 257 | 412 | 18 | 174 | 1.73e-36 | 134 |
Find 183 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAATTTCTGGCATGTATT+TGG | 0.135183 | 6_2:+69817690 | Msa0926240:CDS |
| AGCTTCTCAGTCCCAATATT+TGG | 0.142165 | 6_2:+69818936 | Msa0926240:CDS |
| ATAAATTAGGATTAACTTAT+TGG | 0.144435 | 6_2:+69819295 | Msa0926240:three_prime_UTR |
| TCTCCCATATTATTCTTAAA+AGG | 0.186622 | 6_2:-69819222 | None:intergenic |
| GGTACAACACCGTGCCATTT+TGG | 0.208007 | 6_2:-69817086 | None:intergenic |
| GCTGTGACCTCCCTGCTTCT+TGG | 0.234177 | 6_2:+69819153 | Msa0926240:three_prime_UTR |
| CTGCGATATTGTTTCTGTTC+GGG | 0.243037 | 6_2:+69818672 | Msa0926240:CDS |
| GGGTTTCACGTTCTCATTTC+CGG | 0.245570 | 6_2:+69816158 | Msa0926240:CDS |
| TTATGATATACATTCCTAAT+TGG | 0.251799 | 6_2:+69819379 | Msa0926240:three_prime_UTR |
| GTAAAGAGGGGTGTGGAAAA+TGG | 0.264013 | 6_2:+69814720 | Msa0926240:CDS |
| TTTCAATCCGTTGATCTATT+TGG | 0.266893 | 6_2:-69819039 | None:intergenic |
| CTATTACACCTGTTTACTTT+TGG | 0.269814 | 6_2:-69818996 | None:intergenic |
| CATACCATCTTTCCTGATTT+CGG | 0.276283 | 6_2:-69817107 | None:intergenic |
| CAGTGAAGGAAGATGGAAAA+TGG | 0.278800 | 6_2:-69814586 | None:intergenic |
| ACTCTTCCACTCCCAAATAT+TGG | 0.279584 | 6_2:-69818948 | None:intergenic |
| GTCCTCTCCCTGGAAGAAAA+AGG | 0.279592 | 6_2:+69816130 | Msa0926240:CDS |
| GCTGCGGCGGCGGTGGTGGT+AGG | 0.287717 | 6_2:+69814686 | Msa0926240:CDS |
| TTTGTTGATAATCTTCCATC+TGG | 0.294263 | 6_2:+69814890 | Msa0926240:CDS |
| CGTGCCCTTCGTATCCAATT+AGG | 0.303217 | 6_2:+69815874 | Msa0926240:CDS |
| CATGTTTACGAGAATAAATT+AGG | 0.307528 | 6_2:+69819282 | Msa0926240:three_prime_UTR |
| GCTTGATCGTATTCTGTTAG+AGG | 0.309758 | 6_2:-69817545 | None:intergenic |
| CCTGCTTCTTGGATAATTGC+CGG | 0.313066 | 6_2:+69819164 | Msa0926240:three_prime_UTR |
| AGCTGCTGCGGCGGCGGTGG+TGG | 0.327169 | 6_2:+69814682 | Msa0926240:CDS |
| ATAATTTCTGGCATGTATTT+GGG | 0.335429 | 6_2:+69817691 | Msa0926240:CDS |
| TCCAACGACGGCTCTGGAAT+TGG | 0.339592 | 6_2:+69818898 | Msa0926240:CDS |
| GAGCTGTCACGCGCATTTGC+AGG | 0.345190 | 6_2:-69816807 | None:intergenic |
| TAATTGCCGGGGCATTGTTT+TGG | 0.345304 | 6_2:+69819177 | Msa0926240:three_prime_UTR |
| GGCAGCTGCTGCGGCGGCGG+TGG | 0.351948 | 6_2:+69814679 | Msa0926240:CDS |
| CTCCCATATTATTCTTAAAA+GGG | 0.360485 | 6_2:-69819221 | None:intergenic |
| ATGTCAATGCAATTCCAAAA+TGG | 0.362928 | 6_2:+69817072 | Msa0926240:CDS |
| GACATCCTGATTGCTGAATC+TGG | 0.364536 | 6_2:-69817000 | None:intergenic |
| TAAAGAGGGGTGTGGAAAAT+GGG | 0.370033 | 6_2:+69814721 | Msa0926240:CDS |
| TGTATTTGGGTGACATTGTA+AGG | 0.382660 | 6_2:+69817704 | Msa0926240:CDS |
| GCTTCTCAGTCCCAATATTT+GGG | 0.384463 | 6_2:+69818937 | Msa0926240:CDS |
| TGAGAATTCCTTTCATACTT+AGG | 0.384705 | 6_2:+69817788 | Msa0926240:CDS |
| GGGAGAGGACGAAACTCTTC+AGG | 0.386617 | 6_2:-69816117 | None:intergenic |
| GGATAGTAAATATTACAAAA+AGG | 0.390947 | 6_2:-69819405 | None:intergenic |
| GGTGGCAGCTGCTGCGGCGG+CGG | 0.392674 | 6_2:+69814676 | Msa0926240:CDS |
| CTCTTCCACTCCCAAATATT+GGG | 0.395121 | 6_2:-69818947 | None:intergenic |
| CTGCTTCTTGGATAATTGCC+GGG | 0.395685 | 6_2:+69819165 | Msa0926240:three_prime_UTR |
| CACGGTGTTGTACCGAAATC+AGG | 0.400642 | 6_2:+69817095 | Msa0926240:CDS |
| TAAATATGCTGCATTTGTTC+CGG | 0.402362 | 6_2:-69817045 | None:intergenic |
| TATCTCTTCCCAATTTCCTT+AGG | 0.406199 | 6_2:-69818729 | None:intergenic |
| TCTGCGATATTGTTTCTGTT+CGG | 0.406751 | 6_2:+69818671 | Msa0926240:CDS |
| CTCTGAAGGGGCGGTAACTA+AGG | 0.409410 | 6_2:-69819070 | None:intergenic |
| GAACATTCCAACGACGGCTC+TGG | 0.410210 | 6_2:+69818892 | Msa0926240:CDS |
| TGTTGAAATGCATAATGGTT+TGG | 0.415206 | 6_2:+69814829 | Msa0926240:CDS |
| TGATGCATAGCCGACATATC+AGG | 0.421558 | 6_2:-69818371 | None:intergenic |
| TTTGGCATCCTAAGGAAATT+GGG | 0.423884 | 6_2:+69818721 | Msa0926240:CDS |
| GCCCCTTCAGAGGTTTCAAC+TGG | 0.424391 | 6_2:+69819081 | Msa0926240:three_prime_UTR |
| CACCATTGCCAAAAGTAAAC+AGG | 0.426274 | 6_2:+69818988 | Msa0926240:three_prime_UTR |
| ATAGGTTATAAACATGGAAT+GGG | 0.427701 | 6_2:+69817499 | Msa0926240:intron |
| AGGAGGAATTGAAACTTCTT+CGG | 0.427820 | 6_2:-69815929 | None:intergenic |
| CTGCGGCGGCGGTGGTGGTA+GGG | 0.428502 | 6_2:+69814687 | Msa0926240:CDS |
| GTCATCGCCGGTGTAATTCT+TGG | 0.428725 | 6_2:+69817020 | Msa0926240:CDS |
| CAGCTTAAACCCTGGAGAAC+AGG | 0.435546 | 6_2:+69817580 | Msa0926240:CDS |
| TTTGAGTCAGTGAAGGAAGA+TGG | 0.444784 | 6_2:-69814593 | None:intergenic |
| ATAACCATTACCTGTTCTCC+AGG | 0.445092 | 6_2:-69817590 | None:intergenic |
| GAGGAGATATTGAAGGTGTT+TGG | 0.451346 | 6_2:+69814752 | Msa0926240:CDS |
| TAAAGCCAGATTCAGCAATC+AGG | 0.452297 | 6_2:+69816995 | Msa0926240:CDS |
| GCAATCGATGTTTGCCTCAC+CGG | 0.452708 | 6_2:-69816177 | None:intergenic |
| CGATACATCTTCGGATCTAA+AGG | 0.457335 | 6_2:+69818394 | Msa0926240:CDS |
| AGGCAAACATCGATTGCATC+CGG | 0.459586 | 6_2:+69816183 | Msa0926240:CDS |
| GGCGGTGGTGGCAGCTGCTG+CGG | 0.464009 | 6_2:+69814670 | Msa0926240:CDS |
| TATAGGTTATAAACATGGAA+TGG | 0.464247 | 6_2:+69817498 | Msa0926240:intron |
| CTGTTCTCCAGGGTTTAAGC+TGG | 0.473065 | 6_2:-69817579 | None:intergenic |
| GAGTACACTAAGGGAGTTGT+TGG | 0.480576 | 6_2:+69818840 | Msa0926240:CDS |
| ATTCCTCCTCATTTGATGAC+CGG | 0.481221 | 6_2:+69815943 | Msa0926240:CDS |
| TGCGATATTGTTTCTGTTCG+GGG | 0.481708 | 6_2:+69818673 | Msa0926240:CDS |
| AGTAGCTACGGTGGCGGTGG+TGG | 0.482492 | 6_2:+69814658 | Msa0926240:CDS |
| TTCATCATTTGACTCAGTAA+TGG | 0.483421 | 6_2:+69814628 | Msa0926240:exon |
| ATGGTGTTAATCACATCATC+AGG | 0.485202 | 6_2:-69818971 | None:intergenic |
| CAGACTTACATGTGAAGAAC+CGG | 0.485850 | 6_2:-69815962 | None:intergenic |
| CGGTGGTGGTAGGGCAGCAA+AGG | 0.490176 | 6_2:+69814696 | Msa0926240:CDS |
| GAAGAGATACGGTAAAGGCC+GGG | 0.491971 | 6_2:+69818743 | Msa0926240:CDS |
| CGCCACCGTAGCTACTATCT+TGG | 0.493817 | 6_2:-69814651 | None:intergenic |
| TGTATATCATAATAATCAAA+AGG | 0.494881 | 6_2:-69819368 | None:intergenic |
| GAAGAGTTTCGTCCTCTCCC+TGG | 0.496420 | 6_2:+69816120 | Msa0926240:CDS |
| AGTGAAGGAAGATGGAAAAT+GGG | 0.496494 | 6_2:-69814585 | None:intergenic |
| ACTCCACTTTATTAGAGTCC+CGG | 0.498137 | 6_2:-69816202 | None:intergenic |
| TAGGATTAACTTATTGGCAA+AGG | 0.498308 | 6_2:+69819301 | Msa0926240:three_prime_UTR |
| AGGTTTCAATATTGAGGATG+TGG | 0.499732 | 6_2:+69816227 | Msa0926240:CDS |
| GGTGGTGGCAGCTGCTGCGG+CGG | 0.503108 | 6_2:+69814673 | Msa0926240:CDS |
| CCGGCAATTATCCAAGAAGC+AGG | 0.503557 | 6_2:-69819164 | None:intergenic |
| GAGTAAAGGTTTCAATATTG+AGG | 0.503775 | 6_2:+69816221 | Msa0926240:CDS |
| ATGGTTGTTGAAATGCATAA+TGG | 0.505584 | 6_2:+69814824 | Msa0926240:CDS |
| GATGCGGCCAGCTTAAACCC+TGG | 0.506758 | 6_2:+69817572 | Msa0926240:CDS |
| GATGAAGCATCCGGGACAAT+CGG | 0.507054 | 6_2:+69818865 | Msa0926240:CDS |
| TGGTGAACTAACCAAGTCCT+TGG | 0.511360 | 6_2:+69816774 | Msa0926240:CDS |
| ATTATTTATAGGGATGAGAA+AGG | 0.515372 | 6_2:+69815814 | Msa0926240:intron |
| TTGTTGGGAGATGAAGCATC+CGG | 0.517867 | 6_2:+69818856 | Msa0926240:CDS |
| TGGAAAATGGGAAAAGGTTG+AGG | 0.519417 | 6_2:+69814733 | Msa0926240:CDS |
| GACAAAACGTCACTATTCAA+AGG | 0.522856 | 6_2:-69819251 | None:intergenic |
| TTGTTGATAATCTTCCATCT+GGG | 0.524059 | 6_2:+69814891 | Msa0926240:CDS |
| AAGAGATACGGTAAAGGCCG+GGG | 0.530904 | 6_2:+69818744 | Msa0926240:CDS |
| ACTCTAATAAAGTGGAGTAA+AGG | 0.533366 | 6_2:+69816207 | Msa0926240:CDS |
| GGCTTTAGCTACTGTTCCAA+CGG | 0.533554 | 6_2:-69816979 | None:intergenic |
| AAGGAAATTGGGAAGAGATA+CGG | 0.535118 | 6_2:+69818732 | Msa0926240:CDS |
| TCTTCGGATCTAAAGGTGGT+TGG | 0.535692 | 6_2:+69818401 | Msa0926240:CDS |
| GGAAGAGATACGGTAAAGGC+CGG | 0.539448 | 6_2:+69818742 | Msa0926240:CDS |
| TCCCATATTATTCTTAAAAG+GGG | 0.542110 | 6_2:-69819220 | None:intergenic |
| AAGGAAGATGGAAAATGGGT+TGG | 0.542737 | 6_2:-69814581 | None:intergenic |
| CATCCGGGACTCTAATAAAG+TGG | 0.545490 | 6_2:+69816199 | Msa0926240:CDS |
| CAATTAGGTGGAAAAGAGAA+AGG | 0.547032 | 6_2:+69815889 | Msa0926240:CDS |
| TTCCACCTAATTGGATACGA+AGG | 0.550973 | 6_2:-69815879 | None:intergenic |
| GGGCAGCAAAGGAGTAAAGA+GGG | 0.552535 | 6_2:+69814707 | Msa0926240:CDS |
| GCGATATTGTTTCTGTTCGG+GGG | 0.553675 | 6_2:+69818674 | Msa0926240:CDS |
| GATAGTAGCTACGGTGGCGG+TGG | 0.554110 | 6_2:+69814655 | Msa0926240:CDS |
| CTTCATACCAAATAGATCAA+CGG | 0.555661 | 6_2:+69819032 | Msa0926240:three_prime_UTR |
| TGTACCGAAATCAGGAAAGA+TGG | 0.555989 | 6_2:+69817103 | Msa0926240:CDS |
| CTTAGTTACCGCCCCTTCAG+AGG | 0.556187 | 6_2:+69819071 | Msa0926240:three_prime_UTR |
| TCCACCTAATTGGATACGAA+GGG | 0.557329 | 6_2:-69815878 | None:intergenic |
| AAAATTGAAGGATATATTGG+AGG | 0.557932 | 6_2:+69818427 | Msa0926240:CDS |
| TCAGTCCCAATATTTGGGAG+TGG | 0.559079 | 6_2:+69818942 | Msa0926240:CDS |
| CGCGAAATTCAGAACATGCA+TGG | 0.559310 | 6_2:+69818816 | Msa0926240:CDS |
| AAAGGTTGAGGAGATATTGA+AGG | 0.560489 | 6_2:+69814745 | Msa0926240:CDS |
| GCCGGTGTAATTCTTGGTAC+CGG | 0.560513 | 6_2:+69817026 | Msa0926240:CDS |
| AATAGATCAACGGATTGAAA+CGG | 0.566718 | 6_2:+69819042 | Msa0926240:three_prime_UTR |
| TATGCATCACGATACATCTT+CGG | 0.567416 | 6_2:+69818385 | Msa0926240:CDS |
| GGACTGAGAAGCTGCAAGGA+GGG | 0.568050 | 6_2:-69818926 | None:intergenic |
| AGGGCAGCAAAGGAGTAAAG+AGG | 0.568209 | 6_2:+69814706 | Msa0926240:CDS |
| AAGGAGAGTACTACTGAAGA+TGG | 0.568422 | 6_2:+69817723 | Msa0926240:CDS |
| TCATCATACCTAAGTATGAA+AGG | 0.568524 | 6_2:-69817796 | None:intergenic |
| GGGGTGTGGAAAATGGGAAA+AGG | 0.570133 | 6_2:+69814727 | Msa0926240:CDS |
| TATGAAAGGAATTCTCAACT+TGG | 0.570144 | 6_2:-69817782 | None:intergenic |
| AGCAATCAGGATGTCATCGC+CGG | 0.572183 | 6_2:+69817008 | Msa0926240:CDS |
| AGTACACTAAGGGAGTTGTT+GGG | 0.576154 | 6_2:+69818841 | Msa0926240:CDS |
| AGCAAAGAGAATAACCCAGA+TGG | 0.576188 | 6_2:-69814905 | None:intergenic |
| GAAGAGTGTTGCTGAAGCTA+TGG | 0.578537 | 6_2:+69814805 | Msa0926240:CDS |
| GGCAAACATCGATTGCATCC+GGG | 0.583297 | 6_2:+69816184 | Msa0926240:CDS |
| ATGTTCGATTCCGATTGTCC+CGG | 0.583578 | 6_2:-69818875 | None:intergenic |
| ATGAAAGGAATTCTCAACTT+GGG | 0.584176 | 6_2:-69817781 | None:intergenic |
| TAGGTCGGAGAAGATATAGT+TGG | 0.584505 | 6_2:+69816754 | Msa0926240:intron |
| TGCTTCTTGGATAATTGCCG+GGG | 0.586385 | 6_2:+69819166 | Msa0926240:three_prime_UTR |
| TGTTGGGAGATGAAGCATCC+GGG | 0.586853 | 6_2:+69818857 | Msa0926240:CDS |
| CATAATGGTTTGGAGAATGA+AGG | 0.587971 | 6_2:+69814839 | Msa0926240:CDS |
| ACTCCAGTTGAAACCTCTGA+AGG | 0.589044 | 6_2:-69819084 | None:intergenic |
| CTCCAGTTGAAACCTCTGAA+GGG | 0.591198 | 6_2:-69819083 | None:intergenic |
| AAATCAGTGATAGCATTGGA+TGG | 0.591545 | 6_2:+69818775 | Msa0926240:CDS |
| CAGAGGTTTCAACTGGAGTG+TGG | 0.592563 | 6_2:+69819088 | Msa0926240:three_prime_UTR |
| AATGGTTTGGAGAATGAAGG+TGG | 0.593587 | 6_2:+69814842 | Msa0926240:CDS |
| GCCCTTCGTATCCAATTAGG+TGG | 0.595528 | 6_2:+69815877 | Msa0926240:CDS |
| AAAAGTGAGGAAGATTGTTG+TGG | 0.601065 | 6_2:+69818645 | Msa0926240:CDS |
| CGATATTGTTTCTGTTCGGG+GGG | 0.601900 | 6_2:+69818675 | Msa0926240:CDS |
| TCCAATTCCAGAGCCGTCGT+TGG | 0.604490 | 6_2:-69818899 | None:intergenic |
| GAAGAACCGGTCATCAAATG+AGG | 0.604505 | 6_2:-69815949 | None:intergenic |
| CCCATATTATTCTTAAAAGG+GGG | 0.605834 | 6_2:-69819219 | None:intergenic |
| CATGCATGGAGAGTACACTA+AGG | 0.606091 | 6_2:+69818830 | Msa0926240:CDS |
| TAACCATTACCTGTTCTCCA+GGG | 0.606985 | 6_2:-69817589 | None:intergenic |
| CAAAGGAGTAAAGAGGGGTG+TGG | 0.608663 | 6_2:+69814713 | Msa0926240:CDS |
| TCACGTTCTCATTTCCGGTG+AGG | 0.609195 | 6_2:+69816163 | Msa0926240:CDS |
| GATATGCTCAAAGTGAACTT+CGG | 0.609543 | 6_2:-69819111 | None:intergenic |
| TCCAGTTGAAACCTCTGAAG+GGG | 0.609708 | 6_2:-69819082 | None:intergenic |
| GTATAGGACACCTGATATGT+CGG | 0.614303 | 6_2:+69818361 | Msa0926240:intron |
| AATGGCCAAGATAGTAGCTA+CGG | 0.620734 | 6_2:+69814646 | Msa0926240:exon |
| CAAGATAGTAGCTACGGTGG+CGG | 0.623655 | 6_2:+69814652 | Msa0926240:CDS |
| CACGGAAGTTTGTGCCACCA+AGG | 0.624728 | 6_2:-69815855 | None:intergenic |
| GTTTAACCAAAACAATGCCC+CGG | 0.624756 | 6_2:-69819183 | None:intergenic |
| ACTTCTATAGGTTATAAACA+TGG | 0.633077 | 6_2:+69817493 | Msa0926240:intron |
| ATGTAGATTAACGACACCGT+TGG | 0.633722 | 6_2:+69816963 | Msa0926240:intron |
| AAAGGAATTCTCAACTTGGG+AGG | 0.634267 | 6_2:-69817778 | None:intergenic |
| TTAGAGGAAGATGCGAGGAA+CGG | 0.635609 | 6_2:-69817529 | None:intergenic |
| TCCGGTACCAAGAATTACAC+CGG | 0.638972 | 6_2:-69817027 | None:intergenic |
| ATTGGGACTGAGAAGCTGCA+AGG | 0.639823 | 6_2:-69818930 | None:intergenic |
| ATTGGGAAGAGATACGGTAA+AGG | 0.641573 | 6_2:+69818738 | Msa0926240:CDS |
| GAACCGGTCATCAAATGAGG+AGG | 0.648083 | 6_2:-69815946 | None:intergenic |
| AGTTGAAACCTCTGAAGGGG+CGG | 0.652228 | 6_2:-69819079 | None:intergenic |
| AATGCAATTCCAAAATGGCA+CGG | 0.652771 | 6_2:+69817077 | Msa0926240:CDS |
| GGCAGCAAAGGAGTAAAGAG+GGG | 0.655437 | 6_2:+69814708 | Msa0926240:CDS |
| CTAATTGGATACGAAGGGCA+CGG | 0.658298 | 6_2:-69815873 | None:intergenic |
| TACATCTTCGGATCTAAAGG+TGG | 0.662272 | 6_2:+69818397 | Msa0926240:CDS |
| AGATGGAAGATTATCAACAA+AGG | 0.662452 | 6_2:-69814888 | None:intergenic |
| ATAACACACCCCTAAAAGTG+AGG | 0.664801 | 6_2:+69818632 | Msa0926240:CDS |
| CGGCAATTATCCAAGAAGCA+GGG | 0.665655 | 6_2:-69819163 | None:intergenic |
| ATGCATGGAGAGTACACTAA+GGG | 0.666874 | 6_2:+69818831 | Msa0926240:CDS |
| GGCCAAGATAGTAGCTACGG+TGG | 0.672952 | 6_2:+69814649 | Msa0926240:CDS |
| TAGGTTATAAACATGGAATG+GGG | 0.677198 | 6_2:+69817500 | Msa0926240:intron |
| ATACGATCAAGCTCTAGATG+CGG | 0.680431 | 6_2:+69817556 | Msa0926240:CDS |
| TCAGTGATAGCATTGGATGG+AGG | 0.680482 | 6_2:+69818778 | Msa0926240:CDS |
| TTCTGTTAGAGGAAGATGCG+AGG | 0.686859 | 6_2:-69817534 | None:intergenic |
| GGGACTGAGAAGCTGCAAGG+AGG | 0.687192 | 6_2:-69818927 | None:intergenic |
| GGAATCGAACATTCCAACGA+CGG | 0.711066 | 6_2:+69818886 | Msa0926240:CDS |
| CAATTATCCAAGAAGCAGGG+AGG | 0.729004 | 6_2:-69819160 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGTTTTTGTTTTTAATTT+TGG | + | chr6_2:69815402-69815421 | Msa0926240:intron | 10.0% |
| !!! | TTGTTTTTGTTTTTAATTTT+GGG | + | chr6_2:69815403-69815422 | Msa0926240:intron | 10.0% |
| !!! | TGAAATAATAAACATTTTTA+GGG | - | chr6_2:69816037-69816056 | None:intergenic | 10.0% |
| !!! | ATGAAATAATAAACATTTTT+AGG | - | chr6_2:69816038-69816057 | None:intergenic | 10.0% |
| !! | AATTTAATATATAAGAATCA+AGG | - | chr6_2:69816265-69816284 | None:intergenic | 10.0% |
| !!! | ATATTAAATTTTATTTGCAT+CGG | + | chr6_2:69816275-69816294 | Msa0926240:intron | 10.0% |
| !! | TATAATAATACTAACATAAA+TGG | - | chr6_2:69816440-69816459 | None:intergenic | 10.0% |
| !!! | ATTTTTTTAAAAATGTTTCT+TGG | + | chr6_2:69816915-69816934 | Msa0926240:intron | 10.0% |
| !!! | TTTGTTTTTGTTTATGTTTT+TGG | + | chr6_2:69815013-69815032 | Msa0926240:intron | 15.0% |
| !!! | ATTTATGTGTTTTTTGTTTA+TGG | + | chr6_2:69815209-69815228 | Msa0926240:intron | 15.0% |
| !!! | AAATTTGTGTTTTTTGTTTT+TGG | + | chr6_2:69815695-69815714 | Msa0926240:intron | 15.0% |
| !! | ATTAATAGTTTACAATTTCA+GGG | - | chr6_2:69817294-69817313 | None:intergenic | 15.0% |
| !!! | ATTAAAATTTTGCAATTTCA+GGG | + | chr6_2:69817360-69817379 | Msa0926240:intron | 15.0% |
| !! | TGATCTAAATAAGATAAATT+AGG | - | chr6_2:69817943-69817962 | None:intergenic | 15.0% |
| !! | AAAAAAATTGAAGGATATAT+TGG | + | chr6_2:69818424-69818443 | Msa0926240:CDS | 15.0% |
| !! | ATAAATTAGGATTAACTTAT+TGG | + | chr6_2:69819295-69819314 | Msa0926240:three_prime_UTR | 15.0% |
| !! | TGTATATCATAATAATCAAA+AGG | - | chr6_2:69819371-69819390 | None:intergenic | 15.0% |
| !! | TGATCATTACAAACAATTAT+TGG | - | chr6_2:69815583-69815602 | None:intergenic | 20.0% |
| !! | AACAAAAAACACAAATTTCT+AGG | - | chr6_2:69815693-69815712 | None:intergenic | 20.0% |
| !! | AAGTTAAAAAATACCCAAAA+AGG | - | chr6_2:69815788-69815807 | None:intergenic | 20.0% |
| !! | GTTTATTATTTCATTACTAC+AGG | + | chr6_2:69816044-69816063 | Msa0926240:intron | 20.0% |
| !! | AACTAGAAATGTATTAATGT+AGG | - | chr6_2:69816606-69816625 | None:intergenic | 20.0% |
| !! | AATTAGAATGACAATGAATA+GGG | - | chr6_2:69816684-69816703 | None:intergenic | 20.0% |
| !! | GATTAATAGTTTACAATTTC+AGG | - | chr6_2:69817295-69817314 | None:intergenic | 20.0% |
| !!! | GATTAAAATTTTGCAATTTC+AGG | + | chr6_2:69817359-69817378 | Msa0926240:intron | 20.0% |
| !!! | TATTTACTCATTTTAGTTGT+TGG | + | chr6_2:69817448-69817467 | Msa0926240:intron | 20.0% |
| !! | CTGAATATTATTACTTCTAT+AGG | + | chr6_2:69817481-69817500 | Msa0926240:intron | 20.0% |
| !!! | ATTTTTGAGAAGATAATTTC+TGG | + | chr6_2:69817679-69817698 | Msa0926240:CDS | 20.0% |
| !! | TCTAAATAAGATAAATTAGG+AGG | - | chr6_2:69817940-69817959 | None:intergenic | 20.0% |
| !! | AAAATAATGAACAAGAATGA+TGG | - | chr6_2:69818293-69818312 | None:intergenic | 20.0% |
| !!! | TATAATCTTGCAGTAAATTT+TGG | + | chr6_2:69818506-69818525 | Msa0926240:intron | 20.0% |
| !! | TGATGAAAGATTATAAACAA+TGG | - | chr6_2:69818537-69818556 | None:intergenic | 20.0% |
| !! | TTATCAATCTAAAGAAAAGA+TGG | - | chr6_2:69818616-69818635 | None:intergenic | 20.0% |
| !! | TTATGATATACATTCCTAAT+TGG | + | chr6_2:69819379-69819398 | Msa0926240:three_prime_UTR | 20.0% |
| !! | GGATAGTAAATATTACAAAA+AGG | - | chr6_2:69819408-69819427 | None:intergenic | 20.0% |
| !!! | TATCCTAGTTTATTTTTGTT+TGG | + | chr6_2:69819423-69819442 | Msa0926240:three_prime_UTR | 20.0% |
| ! | AAAACACATAAATTTGAGTG+AGG | - | chr6_2:69815202-69815221 | None:intergenic | 25.0% |
| ! | TCAAGAACTCTTTAACAAAA+AGG | - | chr6_2:69815250-69815269 | None:intergenic | 25.0% |
| !!! | GTGTTTATTGTTTCTGTTTT+TGG | + | chr6_2:69815330-69815349 | Msa0926240:intron | 25.0% |
| ! | TGATTCTCAATTATTGAACA+AGG | - | chr6_2:69815377-69815396 | None:intergenic | 25.0% |
| ! | TTGAAATTCAGGATACAATA+CGG | + | chr6_2:69815667-69815686 | Msa0926240:intron | 25.0% |
| ! | ACTTCATAAACTCTTTAACA+TGG | - | chr6_2:69815736-69815755 | None:intergenic | 25.0% |
| !!! | TTGGGTATTTTTTAACTTTG+TGG | + | chr6_2:69815790-69815809 | Msa0926240:intron | 25.0% |
| ! | AACTTTGTGGCATTATTTAT+AGG | + | chr6_2:69815803-69815822 | Msa0926240:intron | 25.0% |
| ! | ACTTTGTGGCATTATTTATA+GGG | + | chr6_2:69815804-69815823 | Msa0926240:intron | 25.0% |
| ! | ATTATTTATAGGGATGAGAA+AGG | + | chr6_2:69815814-69815833 | Msa0926240:intron | 25.0% |
| ! | TATTAACTAAGCAGAATCAA+TGG | - | chr6_2:69816009-69816028 | None:intergenic | 25.0% |
| !! | AGTATCGAATAACTAAAATG+TGG | + | chr6_2:69816512-69816531 | Msa0926240:intron | 25.0% |
| ! | GTATCGAATAACTAAAATGT+GGG | + | chr6_2:69816513-69816532 | Msa0926240:intron | 25.0% |
| ! | AATAACTAAAATGTGGGTAA+TGG | + | chr6_2:69816519-69816538 | Msa0926240:intron | 25.0% |
| ! | CAATTAGAATGACAATGAAT+AGG | - | chr6_2:69816685-69816704 | None:intergenic | 25.0% |
| ! | ATTGTCATTCTAATTGAATG+TGG | + | chr6_2:69816689-69816708 | Msa0926240:intron | 25.0% |
| !!! | TTGGAATATTGATAATGTGA+AGG | - | chr6_2:69817265-69817284 | None:intergenic | 25.0% |
| ! | ACATTATCAATATTCCAAAG+TGG | + | chr6_2:69817267-69817286 | Msa0926240:intron | 25.0% |
| !!! | TCGAAATATTGATAATGTGA+AGG | + | chr6_2:69817389-69817408 | Msa0926240:intron | 25.0% |
| !!! | CGAAATATTGATAATGTGAA+GGG | + | chr6_2:69817390-69817409 | Msa0926240:intron | 25.0% |
| !! | TATGTTGTCTTACATTTTCA+AGG | + | chr6_2:69817414-69817433 | Msa0926240:intron | 25.0% |
| !!! | TACATTTTCAAGGACTAAAT+TGG | + | chr6_2:69817424-69817443 | Msa0926240:intron | 25.0% |
| ! | ACTTCTATAGGTTATAAACA+TGG | + | chr6_2:69817493-69817512 | Msa0926240:intron | 25.0% |
| ! | TATAGGTTATAAACATGGAA+TGG | + | chr6_2:69817498-69817517 | Msa0926240:intron | 25.0% |
| ! | ATAGGTTATAAACATGGAAT+GGG | + | chr6_2:69817499-69817518 | Msa0926240:intron | 25.0% |
| !! | ATCTATAGTTGCTTTAAACA+CGG | + | chr6_2:69817611-69817630 | Msa0926240:intron | 25.0% |
| !!! | ATAATTTCTGGCATGTATTT+GGG | + | chr6_2:69817691-69817710 | Msa0926240:CDS | 25.0% |
| ! | TAAACAGAATCTTTAGTGTT+AGG | - | chr6_2:69817834-69817853 | None:intergenic | 25.0% |
| ! | ATCGCATTTCATTCAAAATT+TGG | + | chr6_2:69817864-69817883 | Msa0926240:intron | 25.0% |
| !!! | ATGAATTTTTTTGTGAACAG+TGG | + | chr6_2:69817887-69817906 | Msa0926240:intron | 25.0% |
| ! | CTTATTTAGATCATCTTCAA+TGG | + | chr6_2:69817950-69817969 | Msa0926240:intron | 25.0% |
| !! | GATTCTTAACATACTTTTAG+TGG | + | chr6_2:69817987-69818006 | Msa0926240:intron | 25.0% |
| ! | AGATTGCTTATTATAAGAAC+CGG | - | chr6_2:69818136-69818155 | None:intergenic | 25.0% |
| !! | TGTTTAATTTAGTATCGAAC+AGG | - | chr6_2:69818217-69818236 | None:intergenic | 25.0% |
| ! | TTCAATACAAAGAAAGTTGA+AGG | - | chr6_2:69818317-69818336 | None:intergenic | 25.0% |
| !!! | AACGTTCACATCTTTTTTTA+TGG | + | chr6_2:69818335-69818354 | Msa0926240:intron | 25.0% |
| !!! | ACGTTCACATCTTTTTTTAT+GGG | + | chr6_2:69818336-69818355 | Msa0926240:intron | 25.0% |
| ! | AAAATTGAAGGATATATTGG+AGG | + | chr6_2:69818427-69818446 | Msa0926240:CDS | 25.0% |
| ! | TCCCATATTATTCTTAAAAG+GGG | - | chr6_2:69819223-69819242 | None:intergenic | 25.0% |
| ! | CTCCCATATTATTCTTAAAA+GGG | - | chr6_2:69819224-69819243 | None:intergenic | 25.0% |
| ! | TCTCCCATATTATTCTTAAA+AGG | - | chr6_2:69819225-69819244 | None:intergenic | 25.0% |
| ! | CATGTTTACGAGAATAAATT+AGG | + | chr6_2:69819282-69819301 | Msa0926240:three_prime_UTR | 25.0% |
| ! | TGACCAAACAAAAATAAACT+AGG | - | chr6_2:69819429-69819448 | None:intergenic | 25.0% |
| TTCATCATTTGACTCAGTAA+TGG | + | chr6_2:69814628-69814647 | Msa0926240:exon | 30.0% | |
| ATGGTTGTTGAAATGCATAA+TGG | + | chr6_2:69814824-69814843 | Msa0926240:CDS | 30.0% | |
| TGTTGAAATGCATAATGGTT+TGG | + | chr6_2:69814829-69814848 | Msa0926240:CDS | 30.0% | |
| AGATGGAAGATTATCAACAA+AGG | - | chr6_2:69814891-69814910 | None:intergenic | 30.0% | |
| !! | TTTGTTGATAATCTTCCATC+TGG | + | chr6_2:69814890-69814909 | Msa0926240:CDS | 30.0% |
| !! | TTGTTGATAATCTTCCATCT+GGG | + | chr6_2:69814891-69814910 | Msa0926240:CDS | 30.0% |
| AATTCATGAACTCTTCAACA+AGG | - | chr6_2:69815444-69815463 | None:intergenic | 30.0% | |
| ! | CTTTTGTTGAACTAAATGCT+TGG | + | chr6_2:69815488-69815507 | Msa0926240:intron | 30.0% |
| CAAACAATTATTGGAAAGTG+AGG | - | chr6_2:69815574-69815593 | None:intergenic | 30.0% | |
| ! | CATACCACGATTTAAAACAT+TGG | - | chr6_2:69815610-69815629 | None:intergenic | 30.0% |
| !! | CAATGTTTTAAATCGTGGTA+TGG | + | chr6_2:69815608-69815627 | Msa0926240:intron | 30.0% |
| ATTTCAAAATTCTCTCGCAA+CGG | - | chr6_2:69815654-69815673 | None:intergenic | 30.0% | |
| ! | TGTCATTGTTCATTCCTTTT+TGG | + | chr6_2:69815771-69815790 | Msa0926240:intron | 30.0% |
| ! | GTCATTGTTCATTCCTTTTT+GGG | + | chr6_2:69815772-69815791 | Msa0926240:intron | 30.0% |
| ACTCTAATAAAGTGGAGTAA+AGG | + | chr6_2:69816207-69816226 | Msa0926240:CDS | 30.0% | |
| GAGTAAAGGTTTCAATATTG+AGG | + | chr6_2:69816221-69816240 | Msa0926240:CDS | 30.0% | |
| AAGAGTTTATGTGGTACAAA+TGG | - | chr6_2:69816316-69816335 | None:intergenic | 30.0% | |
| CAAAGTATGACATATAACTC+AGG | - | chr6_2:69816404-69816423 | None:intergenic | 30.0% | |
| ACAGAATCACAATGAAGTAA+CGG | - | chr6_2:69816723-69816742 | None:intergenic | 30.0% | |
| AGTAATCGTTGAAAAGGTAA+AGG | - | chr6_2:69816865-69816884 | None:intergenic | 30.0% | |
| ! | TACCTTTTCAACGATTACTT+AGG | + | chr6_2:69816866-69816885 | Msa0926240:intron | 30.0% |
| ATCCTAAGTAATCGTTGAAA+AGG | - | chr6_2:69816871-69816890 | None:intergenic | 30.0% | |
| ATCAAAACCTAACTTGATGA+TGG | + | chr6_2:69816939-69816958 | Msa0926240:intron | 30.0% | |
| TAAATATGCTGCATTTGTTC+CGG | - | chr6_2:69817048-69817067 | None:intergenic | 30.0% | |
| ATGTCAATGCAATTCCAAAA+TGG | + | chr6_2:69817072-69817091 | Msa0926240:CDS | 30.0% | |
| !! | TATAATTTTAGAGACCAACG+TGG | - | chr6_2:69817224-69817243 | None:intergenic | 30.0% |
| !! | TATTGATAATGTGAAGGACT+AGG | - | chr6_2:69817259-69817278 | None:intergenic | 30.0% |
| ATCAAGTTCATCTCTTTGTT+TGG | + | chr6_2:69817312-69817331 | Msa0926240:intron | 30.0% | |
| TAGGTTATAAACATGGAATG+GGG | + | chr6_2:69817500-69817519 | Msa0926240:intron | 30.0% | |
| CAAAAATCTGCAAATAACAG+TGG | - | chr6_2:69817666-69817685 | None:intergenic | 30.0% | |
| !! | GATAATTTCTGGCATGTATT+TGG | + | chr6_2:69817690-69817709 | Msa0926240:CDS | 30.0% |
| ATGAAAGGAATTCTCAACTT+GGG | - | chr6_2:69817784-69817803 | None:intergenic | 30.0% | |
| TATGAAAGGAATTCTCAACT+TGG | - | chr6_2:69817785-69817804 | None:intergenic | 30.0% | |
| TGAGAATTCCTTTCATACTT+AGG | + | chr6_2:69817788-69817807 | Msa0926240:CDS | 30.0% | |
| TCATCATACCTAAGTATGAA+AGG | - | chr6_2:69817799-69817818 | None:intergenic | 30.0% | |
| ! | TAAATTCTAGTTGCCATTGT+AGG | - | chr6_2:69818020-69818039 | None:intergenic | 30.0% |
| !!! | AGACTGGTTTTAACTTCTAA+AGG | - | chr6_2:69818085-69818104 | None:intergenic | 30.0% |
| ! | AAACTGATCCCTTAAGATTT+TGG | + | chr6_2:69818108-69818127 | Msa0926240:intron | 30.0% |
| TCTCCAATGGTTTAATGTAT+AGG | + | chr6_2:69818184-69818203 | Msa0926240:intron | 30.0% | |
| CTCCAATGGTTTAATGTATA+GGG | + | chr6_2:69818185-69818204 | Msa0926240:intron | 30.0% | |
| TACCCTATACATTAAACCAT+TGG | - | chr6_2:69818190-69818209 | None:intergenic | 30.0% | |
| !!! | TCTTTTTTTATGGGACGTAT+AGG | + | chr6_2:69818345-69818364 | Msa0926240:intron | 30.0% |
| ATTGTATTTCTCCTATCCAA+AGG | + | chr6_2:69818564-69818583 | Msa0926240:intron | 30.0% | |
| !! | AACAATCTTCCTCACTTTTA+GGG | - | chr6_2:69818644-69818663 | None:intergenic | 30.0% |
| ACAAAAATCAGTGATAGCAT+TGG | + | chr6_2:69818771-69818790 | Msa0926240:CDS | 30.0% | |
| ! | CTATTACACCTGTTTACTTT+TGG | - | chr6_2:69818999-69819018 | None:intergenic | 30.0% |
| CTTCATACCAAATAGATCAA+CGG | + | chr6_2:69819032-69819051 | Msa0926240:three_prime_UTR | 30.0% | |
| TTTCAATCCGTTGATCTATT+TGG | - | chr6_2:69819042-69819061 | None:intergenic | 30.0% | |
| !! | AATAGATCAACGGATTGAAA+CGG | + | chr6_2:69819042-69819061 | Msa0926240:three_prime_UTR | 30.0% |
| !! | TCCCCCTTTTAAGAATAATA+TGG | + | chr6_2:69819218-69819237 | Msa0926240:three_prime_UTR | 30.0% |
| CCCATATTATTCTTAAAAGG+GGG | - | chr6_2:69819222-69819241 | None:intergenic | 30.0% | |
| !! | CCCCCTTTTAAGAATAATAT+GGG | + | chr6_2:69819219-69819238 | Msa0926240:three_prime_UTR | 30.0% |
| TAGGATTAACTTATTGGCAA+AGG | + | chr6_2:69819301-69819320 | Msa0926240:three_prime_UTR | 30.0% | |
| TTACAAAAAGGTTGCCAATT+AGG | - | chr6_2:69819396-69819415 | None:intergenic | 30.0% | |
| AGTGAAGGAAGATGGAAAAT+GGG | - | chr6_2:69814588-69814607 | None:intergenic | 35.0% | |
| !! | AGAAACTTTTGAGTCAGTGA+AGG | - | chr6_2:69814603-69814622 | None:intergenic | 35.0% |
| AAAGGTTGAGGAGATATTGA+AGG | + | chr6_2:69814745-69814764 | Msa0926240:CDS | 35.0% | |
| ! | CATAATGGTTTGGAGAATGA+AGG | + | chr6_2:69814839-69814858 | Msa0926240:CDS | 35.0% |
| TCATGAACACTTCAACAACA+AGG | - | chr6_2:69815062-69815081 | None:intergenic | 35.0% | |
| !! | ATCGCCAATGTTTTAAATCG+TGG | + | chr6_2:69815603-69815622 | Msa0926240:intron | 35.0% |
| !!! | GCGAGAGAATTTTGAAATTC+AGG | + | chr6_2:69815656-69815675 | Msa0926240:intron | 35.0% |
| ! | CTCTTTTATGCATTAGACCT+TGG | + | chr6_2:69815838-69815857 | Msa0926240:CDS | 35.0% |
| ! | TTTTATGCATTAGACCTTGG+TGG | + | chr6_2:69815841-69815860 | Msa0926240:CDS | 35.0% |
| ! | CTTTCTCTTTTCCACCTAAT+TGG | - | chr6_2:69815891-69815910 | None:intergenic | 35.0% |
| CAATTAGGTGGAAAAGAGAA+AGG | + | chr6_2:69815889-69815908 | Msa0926240:CDS | 35.0% | |
| AGGAGGAATTGAAACTTCTT+CGG | - | chr6_2:69815932-69815951 | None:intergenic | 35.0% | |
| AGGTTTCAATATTGAGGATG+TGG | + | chr6_2:69816227-69816246 | Msa0926240:CDS | 35.0% | |
| CTCTTCGAAAAGAGTTTATG+TGG | - | chr6_2:69816325-69816344 | None:intergenic | 35.0% | |
| ! | TCTCTTCATTTGTTGCGAAT+AGG | + | chr6_2:69816350-69816369 | Msa0926240:intron | 35.0% |
| ACATACATACCTAGCAGTTA+AGG | + | chr6_2:69816556-69816575 | Msa0926240:intron | 35.0% | |
| ATACCTAGCAGTTAAGGATA+CGG | + | chr6_2:69816562-69816581 | Msa0926240:intron | 35.0% | |
| TACTTCATTGTGATTCTGTG+TGG | + | chr6_2:69816724-69816743 | Msa0926240:intron | 35.0% | |
| GTAAAGGAATTGCGAAAAGA+AGG | - | chr6_2:69816849-69816868 | None:intergenic | 35.0% | |
| CTACATTCCATCATCAAGTT+AGG | - | chr6_2:69816949-69816968 | None:intergenic | 35.0% | |
| AATGCAATTCCAAAATGGCA+CGG | + | chr6_2:69817077-69817096 | Msa0926240:CDS | 35.0% | |
| CATACCATCTTTCCTGATTT+CGG | - | chr6_2:69817110-69817129 | None:intergenic | 35.0% | |
| TTACATGCCTCTTAGAATCA+TGG | - | chr6_2:69817182-69817201 | None:intergenic | 35.0% | |
| AGTTGAGTAAATATCCACGT+TGG | + | chr6_2:69817207-69817226 | Msa0926240:intron | 35.0% | |
| TTGTTTGGATCTGTTAACGA+AGG | + | chr6_2:69817327-69817346 | Msa0926240:intron | 35.0% | |
| TGTTTGGATCTGTTAACGAA+GGG | + | chr6_2:69817328-69817347 | Msa0926240:intron | 35.0% | |
| TGTATTTGGGTGACATTGTA+AGG | + | chr6_2:69817704-69817723 | Msa0926240:CDS | 35.0% | |
| ! | GCTGAAGAAGCTGAAATTTT+CGG | + | chr6_2:69817745-69817764 | Msa0926240:CDS | 35.0% |
| ! | CTGAAGAAGCTGAAATTTTC+GGG | + | chr6_2:69817746-69817765 | Msa0926240:CDS | 35.0% |
| ! | TGAAGAAGCTGAAATTTTCG+GGG | + | chr6_2:69817747-69817766 | Msa0926240:CDS | 35.0% |
| CAGAATCTTTAGTGTTAGGT+TGG | - | chr6_2:69817830-69817849 | None:intergenic | 35.0% | |
| ATTAGGAGGCAATGAAAATG+AGG | - | chr6_2:69817926-69817945 | None:intergenic | 35.0% | |
| TTCAATGGTAGAACTCATTG+TGG | + | chr6_2:69817965-69817984 | Msa0926240:intron | 35.0% | |
| ! | TAGTGGTTTTTGTCCTACAA+TGG | + | chr6_2:69818004-69818023 | Msa0926240:intron | 35.0% |
| TTGCAGTGAAAATTTCTCTG+AGG | - | chr6_2:69818047-69818066 | None:intergenic | 35.0% | |
| !!! | ATCCCTTAAGATTTTGGAAC+CGG | + | chr6_2:69818114-69818133 | Msa0926240:intron | 35.0% |
| ! | AACCGGTTCCAAAATCTTAA+GGG | - | chr6_2:69818119-69818138 | None:intergenic | 35.0% |
| TATGCATCACGATACATCTT+CGG | + | chr6_2:69818385-69818404 | Msa0926240:CDS | 35.0% | |
| GGTGGTTGGAAAAAAATTGA+AGG | + | chr6_2:69818415-69818434 | Msa0926240:CDS | 35.0% | |
| TGAAGGATATATTGGAGGTA+CGG | + | chr6_2:69818432-69818451 | Msa0926240:intron | 35.0% | |
| !! | ACAATCTTCCTCACTTTTAG+GGG | - | chr6_2:69818643-69818662 | None:intergenic | 35.0% |
| !! | CAACAATCTTCCTCACTTTT+AGG | - | chr6_2:69818645-69818664 | None:intergenic | 35.0% |
| AAAAGTGAGGAAGATTGTTG+TGG | + | chr6_2:69818645-69818664 | Msa0926240:CDS | 35.0% | |
| !! | TCTGCGATATTGTTTCTGTT+CGG | + | chr6_2:69818671-69818690 | Msa0926240:CDS | 35.0% |
| ! | TTTTGGCATCCTAAGGAAAT+TGG | + | chr6_2:69818720-69818739 | Msa0926240:CDS | 35.0% |
| TTTGGCATCCTAAGGAAATT+GGG | + | chr6_2:69818721-69818740 | Msa0926240:CDS | 35.0% | |
| TATCTCTTCCCAATTTCCTT+AGG | - | chr6_2:69818732-69818751 | None:intergenic | 35.0% | |
| AAGGAAATTGGGAAGAGATA+CGG | + | chr6_2:69818732-69818751 | Msa0926240:CDS | 35.0% | |
| !!! | CACTGATTTTTGTTTATCCC+CGG | - | chr6_2:69818764-69818783 | None:intergenic | 35.0% |
| ! | AAATCAGTGATAGCATTGGA+TGG | + | chr6_2:69818775-69818794 | Msa0926240:CDS | 35.0% |
| ! | ATGGTGTTAATCACATCATC+AGG | - | chr6_2:69818974-69818993 | None:intergenic | 35.0% |
| GATATGCTCAAAGTGAACTT+CGG | - | chr6_2:69819114-69819133 | None:intergenic | 35.0% | |
| GACAAAACGTCACTATTCAA+AGG | - | chr6_2:69819254-69819273 | None:intergenic | 35.0% | |
| AAGGAAGATGGAAAATGGGT+TGG | - | chr6_2:69814584-69814603 | None:intergenic | 40.0% | |
| CAGTGAAGGAAGATGGAAAA+TGG | - | chr6_2:69814589-69814608 | None:intergenic | 40.0% | |
| TTTGAGTCAGTGAAGGAAGA+TGG | - | chr6_2:69814596-69814615 | None:intergenic | 40.0% | |
| AATGGCCAAGATAGTAGCTA+CGG | + | chr6_2:69814646-69814665 | Msa0926240:exon | 40.0% | |
| ! | TAAAGAGGGGTGTGGAAAAT+GGG | + | chr6_2:69814721-69814740 | Msa0926240:CDS | 40.0% |
| TGGAAAATGGGAAAAGGTTG+AGG | + | chr6_2:69814733-69814752 | Msa0926240:CDS | 40.0% | |
| !! | GAGGAGATATTGAAGGTGTT+TGG | + | chr6_2:69814752-69814771 | Msa0926240:CDS | 40.0% |
| ! | AATGGTTTGGAGAATGAAGG+TGG | + | chr6_2:69814842-69814861 | Msa0926240:CDS | 40.0% |
| AGCAAAGAGAATAACCCAGA+TGG | - | chr6_2:69814908-69814927 | None:intergenic | 40.0% | |
| TCCACCTAATTGGATACGAA+GGG | - | chr6_2:69815881-69815900 | None:intergenic | 40.0% | |
| TTCCACCTAATTGGATACGA+AGG | - | chr6_2:69815882-69815901 | None:intergenic | 40.0% | |
| ! | ATTCCTCCTCATTTGATGAC+CGG | + | chr6_2:69815943-69815962 | Msa0926240:CDS | 40.0% |
| CAGACTTACATGTGAAGAAC+CGG | - | chr6_2:69815965-69815984 | None:intergenic | 40.0% | |
| ACTCCACTTTATTAGAGTCC+CGG | - | chr6_2:69816205-69816224 | None:intergenic | 40.0% | |
| TAACCGTATCCTTAACTGCT+AGG | - | chr6_2:69816568-69816587 | None:intergenic | 40.0% | |
| ! | GATTCTGTGTGGTTTTCTGT+AGG | + | chr6_2:69816735-69816754 | Msa0926240:intron | 40.0% |
| TAGGTCGGAGAAGATATAGT+TGG | + | chr6_2:69816754-69816773 | Msa0926240:intron | 40.0% | |
| ACCAAGTCCTTGGAAAAAGT+TGG | + | chr6_2:69816784-69816803 | Msa0926240:CDS | 40.0% | |
| ATGTAGATTAACGACACCGT+TGG | + | chr6_2:69816963-69816982 | Msa0926240:intron | 40.0% | |
| TAAAGCCAGATTCAGCAATC+AGG | + | chr6_2:69816995-69817014 | Msa0926240:CDS | 40.0% | |
| TGTACCGAAATCAGGAAAGA+TGG | + | chr6_2:69817103-69817122 | Msa0926240:CDS | 40.0% | |
| GTGTTCACCATGATTCTAAG+AGG | + | chr6_2:69817172-69817191 | Msa0926240:intron | 40.0% | |
| !! | TGTGAAGGACTAGGTTGATA+CGG | - | chr6_2:69817250-69817269 | None:intergenic | 40.0% |
| TACAATTTCAGGGACCACTT+TGG | - | chr6_2:69817284-69817303 | None:intergenic | 40.0% | |
| GCTTGATCGTATTCTGTTAG+AGG | - | chr6_2:69817548-69817567 | None:intergenic | 40.0% | |
| !! | ATACGATCAAGCTCTAGATG+CGG | + | chr6_2:69817556-69817575 | Msa0926240:CDS | 40.0% |
| TAACCATTACCTGTTCTCCA+GGG | - | chr6_2:69817592-69817611 | None:intergenic | 40.0% | |
| ATAACCATTACCTGTTCTCC+AGG | - | chr6_2:69817593-69817612 | None:intergenic | 40.0% | |
| !! | AAGGAGAGTACTACTGAAGA+TGG | + | chr6_2:69817723-69817742 | Msa0926240:CDS | 40.0% |
| AAAGGAATTCTCAACTTGGG+AGG | - | chr6_2:69817781-69817800 | None:intergenic | 40.0% | |
| ! | GAACCGGTTCCAAAATCTTA+AGG | - | chr6_2:69818120-69818139 | None:intergenic | 40.0% |
| GTATAGGACACCTGATATGT+CGG | + | chr6_2:69818361-69818380 | Msa0926240:intron | 40.0% | |
| CGATACATCTTCGGATCTAA+AGG | + | chr6_2:69818394-69818413 | Msa0926240:CDS | 40.0% | |
| TACATCTTCGGATCTAAAGG+TGG | + | chr6_2:69818397-69818416 | Msa0926240:CDS | 40.0% | |
| TTTCTCCTATCCAAAGGAAG+TGG | + | chr6_2:69818570-69818589 | Msa0926240:intron | 40.0% | |
| GAAAACCAAACCACTTCCTT+TGG | - | chr6_2:69818583-69818602 | None:intergenic | 40.0% | |
| ATAACACACCCCTAAAAGTG+AGG | + | chr6_2:69818632-69818651 | Msa0926240:CDS | 40.0% | |
| !! | CTGCGATATTGTTTCTGTTC+GGG | + | chr6_2:69818672-69818691 | Msa0926240:CDS | 40.0% |
| !! | TGCGATATTGTTTCTGTTCG+GGG | + | chr6_2:69818673-69818692 | Msa0926240:CDS | 40.0% |
| !!! | CTGCTATTTTTGGCATCCTA+AGG | + | chr6_2:69818713-69818732 | Msa0926240:CDS | 40.0% |
| ATTGGGAAGAGATACGGTAA+AGG | + | chr6_2:69818738-69818757 | Msa0926240:CDS | 40.0% | |
| ! | ATGCATGGAGAGTACACTAA+GGG | + | chr6_2:69818831-69818850 | Msa0926240:CDS | 40.0% |
| AGTACACTAAGGGAGTTGTT+GGG | + | chr6_2:69818841-69818860 | Msa0926240:CDS | 40.0% | |
| AGCTTCTCAGTCCCAATATT+TGG | + | chr6_2:69818936-69818955 | Msa0926240:CDS | 40.0% | |
| GCTTCTCAGTCCCAATATTT+GGG | + | chr6_2:69818937-69818956 | Msa0926240:CDS | 40.0% | |
| CTCTTCCACTCCCAAATATT+GGG | - | chr6_2:69818950-69818969 | None:intergenic | 40.0% | |
| ACTCTTCCACTCCCAAATAT+TGG | - | chr6_2:69818951-69818970 | None:intergenic | 40.0% | |
| CACCATTGCCAAAAGTAAAC+AGG | + | chr6_2:69818988-69819007 | Msa0926240:three_prime_UTR | 40.0% | |
| !! | CACCTGTTTACTTTTGGCAA+TGG | - | chr6_2:69818993-69819012 | None:intergenic | 40.0% |
| GTTTAACCAAAACAATGCCC+CGG | - | chr6_2:69819186-69819205 | None:intergenic | 40.0% | |
| ! | GTAAAGAGGGGTGTGGAAAA+TGG | + | chr6_2:69814720-69814739 | Msa0926240:CDS | 45.0% |
| !! | GAAGAGTGTTGCTGAAGCTA+TGG | + | chr6_2:69814805-69814824 | Msa0926240:CDS | 45.0% |
| CTAATTGGATACGAAGGGCA+CGG | - | chr6_2:69815876-69815895 | None:intergenic | 45.0% | |
| GAAGAACCGGTCATCAAATG+AGG | - | chr6_2:69815952-69815971 | None:intergenic | 45.0% | |
| TCCTCTCCCTGGAAGAAAAA+GGG | + | chr6_2:69816131-69816150 | Msa0926240:CDS | 45.0% | |
| ! | CCAACTCCCTTTTTCTTCCA+GGG | - | chr6_2:69816140-69816159 | None:intergenic | 45.0% |
| CCTGGAAGAAAAAGGGAGTT+GGG | + | chr6_2:69816138-69816157 | Msa0926240:CDS | 45.0% | |
| GGGTTTCACGTTCTCATTTC+CGG | + | chr6_2:69816158-69816177 | Msa0926240:CDS | 45.0% | |
| ! | AGGCAAACATCGATTGCATC+CGG | + | chr6_2:69816183-69816202 | Msa0926240:CDS | 45.0% |
| CATCCGGGACTCTAATAAAG+TGG | + | chr6_2:69816199-69816218 | Msa0926240:CDS | 45.0% | |
| ! | CTGTGTGGTTTTCTGTAGGT+CGG | + | chr6_2:69816739-69816758 | Msa0926240:intron | 45.0% |
| TGGTGAACTAACCAAGTCCT+TGG | + | chr6_2:69816774-69816793 | Msa0926240:CDS | 45.0% | |
| !! | GCCAACTTTTTCCAAGGACT+TGG | - | chr6_2:69816788-69816807 | None:intergenic | 45.0% |
| !! | TTGCAGGCCAACTTTTTCCA+AGG | - | chr6_2:69816794-69816813 | None:intergenic | 45.0% |
| ! | GGCTTTAGCTACTGTTCCAA+CGG | - | chr6_2:69816982-69817001 | None:intergenic | 45.0% |
| GACATCCTGATTGCTGAATC+TGG | - | chr6_2:69817003-69817022 | None:intergenic | 45.0% | |
| TCCGGTACCAAGAATTACAC+CGG | - | chr6_2:69817030-69817049 | None:intergenic | 45.0% | |
| TTAGAGGAAGATGCGAGGAA+CGG | - | chr6_2:69817532-69817551 | None:intergenic | 45.0% | |
| TTCTGTTAGAGGAAGATGCG+AGG | - | chr6_2:69817537-69817556 | None:intergenic | 45.0% | |
| AAACCCTGGAGAACAGGTAA+TGG | + | chr6_2:69817586-69817605 | Msa0926240:intron | 45.0% | |
| !! | AAGGGATCAGTTTCTGAGAC+TGG | - | chr6_2:69818101-69818120 | None:intergenic | 45.0% |
| TGATGCATAGCCGACATATC+AGG | - | chr6_2:69818374-69818393 | None:intergenic | 45.0% | |
| TCTTCGGATCTAAAGGTGGT+TGG | + | chr6_2:69818401-69818420 | Msa0926240:CDS | 45.0% | |
| CCAAACCACTTCCTTTGGAT+AGG | - | chr6_2:69818578-69818597 | None:intergenic | 45.0% | |
| CCTATCCAAAGGAAGTGGTT+TGG | + | chr6_2:69818575-69818594 | Msa0926240:intron | 45.0% | |
| !! | GCGATATTGTTTCTGTTCGG+GGG | + | chr6_2:69818674-69818693 | Msa0926240:CDS | 45.0% |
| !! | CGATATTGTTTCTGTTCGGG+GGG | + | chr6_2:69818675-69818694 | Msa0926240:CDS | 45.0% |
| ! | TCAGTGATAGCATTGGATGG+AGG | + | chr6_2:69818778-69818797 | Msa0926240:CDS | 45.0% |
| CGCGAAATTCAGAACATGCA+TGG | + | chr6_2:69818816-69818835 | Msa0926240:CDS | 45.0% | |
| ! | CATGCATGGAGAGTACACTA+AGG | + | chr6_2:69818830-69818849 | Msa0926240:CDS | 45.0% |
| GAGTACACTAAGGGAGTTGT+TGG | + | chr6_2:69818840-69818859 | Msa0926240:CDS | 45.0% | |
| ! | TTGTTGGGAGATGAAGCATC+CGG | + | chr6_2:69818856-69818875 | Msa0926240:CDS | 45.0% |
| ATGTTCGATTCCGATTGTCC+CGG | - | chr6_2:69818878-69818897 | None:intergenic | 45.0% | |
| GGAATCGAACATTCCAACGA+CGG | + | chr6_2:69818886-69818905 | Msa0926240:CDS | 45.0% | |
| TCAGTCCCAATATTTGGGAG+TGG | + | chr6_2:69818942-69818961 | Msa0926240:CDS | 45.0% | |
| ! | TCCAGTTGAAACCTCTGAAG+GGG | - | chr6_2:69819085-69819104 | None:intergenic | 45.0% |
| CTCCAGTTGAAACCTCTGAA+GGG | - | chr6_2:69819086-69819105 | None:intergenic | 45.0% | |
| ACTCCAGTTGAAACCTCTGA+AGG | - | chr6_2:69819087-69819106 | None:intergenic | 45.0% | |
| CAATTATCCAAGAAGCAGGG+AGG | - | chr6_2:69819163-69819182 | None:intergenic | 45.0% | |
| CGGCAATTATCCAAGAAGCA+GGG | - | chr6_2:69819166-69819185 | None:intergenic | 45.0% | |
| CCTGCTTCTTGGATAATTGC+CGG | + | chr6_2:69819164-69819183 | Msa0926240:three_prime_UTR | 45.0% | |
| CTGCTTCTTGGATAATTGCC+GGG | + | chr6_2:69819165-69819184 | Msa0926240:three_prime_UTR | 45.0% | |
| TGCTTCTTGGATAATTGCCG+GGG | + | chr6_2:69819166-69819185 | Msa0926240:three_prime_UTR | 45.0% | |
| !!! | TAATTGCCGGGGCATTGTTT+TGG | + | chr6_2:69819177-69819196 | Msa0926240:three_prime_UTR | 45.0% |
| !!! | TTTTTTTTTTTTTTAAAATG+TGG | + | chr6_2:69816627-69816646 | Msa0926240:intron | 5.0% |
| CAAGATAGTAGCTACGGTGG+CGG | + | chr6_2:69814652-69814671 | Msa0926240:CDS | 50.0% | |
| AGGGCAGCAAAGGAGTAAAG+AGG | + | chr6_2:69814706-69814725 | Msa0926240:CDS | 50.0% | |
| GGGCAGCAAAGGAGTAAAGA+GGG | + | chr6_2:69814707-69814726 | Msa0926240:CDS | 50.0% | |
| GGCAGCAAAGGAGTAAAGAG+GGG | + | chr6_2:69814708-69814727 | Msa0926240:CDS | 50.0% | |
| CAAAGGAGTAAAGAGGGGTG+TGG | + | chr6_2:69814713-69814732 | Msa0926240:CDS | 50.0% | |
| GGGGTGTGGAAAATGGGAAA+AGG | + | chr6_2:69814727-69814746 | Msa0926240:CDS | 50.0% | |
| TTCTCTCGCAACGGCATATC+AGG | - | chr6_2:69815645-69815664 | None:intergenic | 50.0% | |
| CGTGCCCTTCGTATCCAATT+AGG | + | chr6_2:69815874-69815893 | Msa0926240:CDS | 50.0% | |
| GCCCTTCGTATCCAATTAGG+TGG | + | chr6_2:69815877-69815896 | Msa0926240:CDS | 50.0% | |
| GAACCGGTCATCAAATGAGG+AGG | - | chr6_2:69815949-69815968 | None:intergenic | 50.0% | |
| GTCCTCTCCCTGGAAGAAAA+AGG | + | chr6_2:69816130-69816149 | Msa0926240:CDS | 50.0% | |
| ! | TCCCTTTTTCTTCCAGGGAG+AGG | - | chr6_2:69816135-69816154 | None:intergenic | 50.0% |
| CCCTGGAAGAAAAAGGGAGT+TGG | + | chr6_2:69816137-69816156 | Msa0926240:CDS | 50.0% | |
| ! | CCCAACTCCCTTTTTCTTCC+AGG | - | chr6_2:69816141-69816160 | None:intergenic | 50.0% |
| TCACGTTCTCATTTCCGGTG+AGG | + | chr6_2:69816163-69816182 | Msa0926240:CDS | 50.0% | |
| GCAATCGATGTTTGCCTCAC+CGG | - | chr6_2:69816180-69816199 | None:intergenic | 50.0% | |
| ! | GGCAAACATCGATTGCATCC+GGG | + | chr6_2:69816184-69816203 | Msa0926240:CDS | 50.0% |
| AGCAATCAGGATGTCATCGC+CGG | + | chr6_2:69817008-69817027 | Msa0926240:CDS | 50.0% | |
| GTCATCGCCGGTGTAATTCT+TGG | + | chr6_2:69817020-69817039 | Msa0926240:CDS | 50.0% | |
| GCCGGTGTAATTCTTGGTAC+CGG | + | chr6_2:69817026-69817045 | Msa0926240:CDS | 50.0% | |
| !!! | GGTACAACACCGTGCCATTT+TGG | - | chr6_2:69817089-69817108 | None:intergenic | 50.0% |
| !! | CACGGTGTTGTACCGAAATC+AGG | + | chr6_2:69817095-69817114 | Msa0926240:CDS | 50.0% |
| CTGTTCTCCAGGGTTTAAGC+TGG | - | chr6_2:69817582-69817601 | None:intergenic | 50.0% | |
| CAGCTTAAACCCTGGAGAAC+AGG | + | chr6_2:69817580-69817599 | Msa0926240:CDS | 50.0% | |
| TGTGACTTCCGTGTCTACGA+AGG | + | chr6_2:69818160-69818179 | Msa0926240:intron | 50.0% | |
| GTGACTTCCGTGTCTACGAA+GGG | + | chr6_2:69818161-69818180 | Msa0926240:intron | 50.0% | |
| TTGGAGACCCTTCGTAGACA+CGG | - | chr6_2:69818171-69818190 | None:intergenic | 50.0% | |
| TGTCTACGAAGGGTCTCCAA+TGG | + | chr6_2:69818171-69818190 | Msa0926240:intron | 50.0% | |
| CGGCTGCTTCTTTGAACATG+TGG | + | chr6_2:69818452-69818471 | Msa0926240:intron | 50.0% | |
| CAAAAATAGCAGCAGCAGCG+AGG | - | chr6_2:69818705-69818724 | None:intergenic | 50.0% | |
| !!! | CTCGCTGCTGCTGCTATTTT+TGG | + | chr6_2:69818703-69818722 | Msa0926240:CDS | 50.0% |
| GGAAGAGATACGGTAAAGGC+CGG | + | chr6_2:69818742-69818761 | Msa0926240:CDS | 50.0% | |
| GAAGAGATACGGTAAAGGCC+GGG | + | chr6_2:69818743-69818762 | Msa0926240:CDS | 50.0% | |
| AAGAGATACGGTAAAGGCCG+GGG | + | chr6_2:69818744-69818763 | Msa0926240:CDS | 50.0% | |
| ! | TGTTGGGAGATGAAGCATCC+GGG | + | chr6_2:69818857-69818876 | Msa0926240:CDS | 50.0% |
| ! | GATGAAGCATCCGGGACAAT+CGG | + | chr6_2:69818865-69818884 | Msa0926240:CDS | 50.0% |
| ATTGGGACTGAGAAGCTGCA+AGG | - | chr6_2:69818933-69818952 | None:intergenic | 50.0% | |
| ! | AGTTGAAACCTCTGAAGGGG+CGG | - | chr6_2:69819082-69819101 | None:intergenic | 50.0% |
| CAGAGGTTTCAACTGGAGTG+TGG | + | chr6_2:69819088-69819107 | Msa0926240:three_prime_UTR | 50.0% | |
| CCGGCAATTATCCAAGAAGC+AGG | - | chr6_2:69819167-69819186 | None:intergenic | 50.0% | |
| GGCCAAGATAGTAGCTACGG+TGG | + | chr6_2:69814649-69814668 | Msa0926240:CDS | 55.0% | |
| CGCCACCGTAGCTACTATCT+TGG | - | chr6_2:69814654-69814673 | None:intergenic | 55.0% | |
| CACGGAAGTTTGTGCCACCA+AGG | - | chr6_2:69815858-69815877 | None:intergenic | 55.0% | |
| GGGAGAGGACGAAACTCTTC+AGG | - | chr6_2:69816120-69816139 | None:intergenic | 55.0% | |
| GAAGAGTTTCGTCCTCTCCC+TGG | + | chr6_2:69816120-69816139 | Msa0926240:CDS | 55.0% | |
| GAACATTCCAACGACGGCTC+TGG | + | chr6_2:69818892-69818911 | Msa0926240:CDS | 55.0% | |
| !! | TCCAACGACGGCTCTGGAAT+TGG | + | chr6_2:69818898-69818917 | Msa0926240:CDS | 55.0% |
| TCCAATTCCAGAGCCGTCGT+TGG | - | chr6_2:69818902-69818921 | None:intergenic | 55.0% | |
| GGACTGAGAAGCTGCAAGGA+GGG | - | chr6_2:69818929-69818948 | None:intergenic | 55.0% | |
| ! | CTCTGAAGGGGCGGTAACTA+AGG | - | chr6_2:69819073-69819092 | None:intergenic | 55.0% |
| CTTAGTTACCGCCCCTTCAG+AGG | + | chr6_2:69819071-69819090 | Msa0926240:three_prime_UTR | 55.0% | |
| GCCCCTTCAGAGGTTTCAAC+TGG | + | chr6_2:69819081-69819100 | Msa0926240:three_prime_UTR | 55.0% | |
| ! | GATAGTAGCTACGGTGGCGG+TGG | + | chr6_2:69814655-69814674 | Msa0926240:CDS | 60.0% |
| GAGCTGTCACGCGCATTTGC+AGG | - | chr6_2:69816810-69816829 | None:intergenic | 60.0% | |
| GATGCGGCCAGCTTAAACCC+TGG | + | chr6_2:69817572-69817591 | Msa0926240:CDS | 60.0% | |
| GGGACTGAGAAGCTGCAAGG+AGG | - | chr6_2:69818930-69818949 | None:intergenic | 60.0% | |
| GCTGTGACCTCCCTGCTTCT+TGG | + | chr6_2:69819153-69819172 | Msa0926240:three_prime_UTR | 60.0% | |
| ! | AGTAGCTACGGTGGCGGTGG+TGG | + | chr6_2:69814658-69814677 | Msa0926240:CDS | 65.0% |
| ! | CGGTGGTGGTAGGGCAGCAA+AGG | + | chr6_2:69814696-69814715 | Msa0926240:CDS | 65.0% |
| ! | GGCGGTGGTGGCAGCTGCTG+CGG | + | chr6_2:69814670-69814689 | Msa0926240:CDS | 75.0% |
| ! | GGTGGTGGCAGCTGCTGCGG+CGG | + | chr6_2:69814673-69814692 | Msa0926240:CDS | 75.0% |
| ! | CTGCGGCGGCGGTGGTGGTA+GGG | + | chr6_2:69814687-69814706 | Msa0926240:CDS | 75.0% |
| ! | GGTGGCAGCTGCTGCGGCGG+CGG | + | chr6_2:69814676-69814695 | Msa0926240:CDS | 80.0% |
| ! | AGCTGCTGCGGCGGCGGTGG+TGG | + | chr6_2:69814682-69814701 | Msa0926240:CDS | 80.0% |
| !! | GCTGCGGCGGCGGTGGTGGT+AGG | + | chr6_2:69814686-69814705 | Msa0926240:CDS | 80.0% |
| ! | GGCAGCTGCTGCGGCGGCGG+TGG | + | chr6_2:69814679-69814698 | Msa0926240:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 69814552 | 69819497 | 69814552 | ID=Msa0926240;Name=Msa0926240 |
| chr6_2 | mRNA | 69814552 | 69819497 | 69814552 | ID=Msa0926240-mRNA-1;Parent=Msa0926240;Name=Msa0926240-mRNA-1;_AED=0.06;_eAED=0.06;_QI=95|1|1|1|1|1|9|522|496 |
| chr6_2 | exon | 69814552 | 69814912 | 69814552 | ID=Msa0926240-mRNA-1:exon:11348;Parent=Msa0926240-mRNA-1 |
| chr6_2 | exon | 69815825 | 69815975 | 69815825 | ID=Msa0926240-mRNA-1:exon:11349;Parent=Msa0926240-mRNA-1 |
| chr6_2 | exon | 69816066 | 69816248 | 69816066 | ID=Msa0926240-mRNA-1:exon:11350;Parent=Msa0926240-mRNA-1 |
| chr6_2 | exon | 69816757 | 69816831 | 69816757 | ID=Msa0926240-mRNA-1:exon:11351;Parent=Msa0926240-mRNA-1 |
| chr6_2 | exon | 69816969 | 69817124 | 69816969 | ID=Msa0926240-mRNA-1:exon:11352;Parent=Msa0926240-mRNA-1 |
| chr6_2 | exon | 69817503 | 69817601 | 69817503 | ID=Msa0926240-mRNA-1:exon:11353;Parent=Msa0926240-mRNA-1 |
| chr6_2 | exon | 69817679 | 69817809 | 69817679 | ID=Msa0926240-mRNA-1:exon:11354;Parent=Msa0926240-mRNA-1 |
| chr6_2 | exon | 69818367 | 69818448 | 69818367 | ID=Msa0926240-mRNA-1:exon:11355;Parent=Msa0926240-mRNA-1 |
| chr6_2 | exon | 69818628 | 69819497 | 69818628 | ID=Msa0926240-mRNA-1:exon:11356;Parent=Msa0926240-mRNA-1 |
| chr6_2 | five_prime_UTR | 69814552 | 69814646 | 69814552 | ID=Msa0926240-mRNA-1:five_prime_utr;Parent=Msa0926240-mRNA-1 |
| chr6_2 | CDS | 69814647 | 69814912 | 69814647 | ID=Msa0926240-mRNA-1:cds;Parent=Msa0926240-mRNA-1 |
| chr6_2 | CDS | 69815825 | 69815975 | 69815825 | ID=Msa0926240-mRNA-1:cds;Parent=Msa0926240-mRNA-1 |
| chr6_2 | CDS | 69816066 | 69816248 | 69816066 | ID=Msa0926240-mRNA-1:cds;Parent=Msa0926240-mRNA-1 |
| chr6_2 | CDS | 69816757 | 69816831 | 69816757 | ID=Msa0926240-mRNA-1:cds;Parent=Msa0926240-mRNA-1 |
| chr6_2 | CDS | 69816969 | 69817124 | 69816969 | ID=Msa0926240-mRNA-1:cds;Parent=Msa0926240-mRNA-1 |
| chr6_2 | CDS | 69817503 | 69817601 | 69817503 | ID=Msa0926240-mRNA-1:cds;Parent=Msa0926240-mRNA-1 |
| chr6_2 | CDS | 69817679 | 69817809 | 69817679 | ID=Msa0926240-mRNA-1:cds;Parent=Msa0926240-mRNA-1 |
| chr6_2 | CDS | 69818367 | 69818448 | 69818367 | ID=Msa0926240-mRNA-1:cds;Parent=Msa0926240-mRNA-1 |
| chr6_2 | CDS | 69818628 | 69818975 | 69818628 | ID=Msa0926240-mRNA-1:cds;Parent=Msa0926240-mRNA-1 |
| chr6_2 | three_prime_UTR | 69818976 | 69819497 | 69818976 | ID=Msa0926240-mRNA-1:three_prime_utr;Parent=Msa0926240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
