Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0900830 | XP_013453188.1 | 90.524 | 496 | 9 | 1 | 1 | 458 | 1 | 496 | 0.0 | 884 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0900830 | sp|Q42525|HXK1_ARATH | 64.606 | 469 | 128 | 1 | 23 | 453 | 25 | 493 | 0.0 | 620 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0900830 | A0A072UCM8 | 90.524 | 496 | 9 | 1 | 1 | 458 | 1 | 496 | 0.0 | 884 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006080 | Msa0900830 | 0.820639 | 6.167267e-53 | -8.615850e-47 |
| Msa0013270 | Msa0900830 | 0.810865 | 9.321621e-51 | -8.615850e-47 |
| Msa0036810 | Msa0900830 | 0.802162 | 6.393416e-49 | -8.615850e-47 |
| Msa0039750 | Msa0900830 | 0.818526 | 1.872265e-52 | -8.615850e-47 |
| Msa0045620 | Msa0900830 | 0.802131 | 6.489220e-49 | -8.615850e-47 |
| Msa0045810 | Msa0900830 | 0.817851 | 2.660444e-52 | -8.615850e-47 |
| Msa0054790 | Msa0900830 | 0.816305 | 5.922419e-52 | -8.615850e-47 |
| Msa0057860 | Msa0900830 | 0.811727 | 6.056539e-51 | -8.615850e-47 |
| Msa0073270 | Msa0900830 | 0.813329 | 2.704606e-51 | -8.615850e-47 |
| Msa0089540 | Msa0900830 | 0.800553 | 1.365240e-48 | -8.615850e-47 |
| Msa0092220 | Msa0900830 | 0.810497 | 1.119423e-50 | -8.615850e-47 |
| Msa0101530 | Msa0900830 | 0.849583 | 2.946368e-60 | -8.615850e-47 |
| Msa0110240 | Msa0900830 | 0.804849 | 1.773388e-49 | -8.615850e-47 |
| Msa0605350 | Msa0900830 | 0.819112 | 1.378013e-52 | -8.615850e-47 |
| Msa0605520 | Msa0900830 | 0.801636 | 8.199513e-49 | -8.615850e-47 |
| Msa0606600 | Msa0900830 | 0.811151 | 8.079380e-51 | -8.615850e-47 |
| Msa0618700 | Msa0900830 | 0.805013 | 1.638360e-49 | -8.615850e-47 |
| Msa0620080 | Msa0900830 | 0.802564 | 5.285677e-49 | -8.615850e-47 |
| Msa0623310 | Msa0900830 | 0.806098 | 9.701839e-50 | -8.615850e-47 |
| Msa0646010 | Msa0900830 | 0.802168 | 6.375598e-49 | -8.615850e-47 |
| Msa0646260 | Msa0900830 | 0.845951 | 2.947002e-59 | -8.615850e-47 |
| Msa0646430 | Msa0900830 | 0.803777 | 2.965229e-49 | -8.615850e-47 |
| Msa0647300 | Msa0900830 | 0.823349 | 1.453335e-53 | -8.615850e-47 |
| Msa0658120 | Msa0900830 | 0.865195 | 7.039399e-65 | -8.615850e-47 |
| Msa0659020 | Msa0900830 | -0.821263 | 4.431693e-53 | -8.615850e-47 |
| Msa0673940 | Msa0900830 | 0.806554 | 7.775797e-50 | -8.615850e-47 |
| Msa0685390 | Msa0900830 | -0.821943 | 3.085993e-53 | -8.615850e-47 |
| Msa0686020 | Msa0900830 | 0.810216 | 1.286972e-50 | -8.615850e-47 |
| Msa0686830 | Msa0900830 | 0.823672 | 1.220823e-53 | -8.615850e-47 |
| Msa0687220 | Msa0900830 | 0.813423 | 2.578688e-51 | -8.615850e-47 |
| Msa0689660 | Msa0900830 | 0.807255 | 5.526955e-50 | -8.615850e-47 |
| Msa0689830 | Msa0900830 | 0.821255 | 4.450265e-53 | -8.615850e-47 |
| Msa0700120 | Msa0900830 | 0.811710 | 6.110814e-51 | -8.615850e-47 |
| Msa0702970 | Msa0900830 | 0.857148 | 1.987587e-62 | -8.615850e-47 |
| Msa0705520 | Msa0900830 | 0.801012 | 1.100325e-48 | -8.615850e-47 |
| Msa0721930 | Msa0900830 | 0.845132 | 4.914143e-59 | -8.615850e-47 |
| Msa0761830 | Msa0900830 | 0.826747 | 2.289614e-54 | -8.615850e-47 |
| Msa0762930 | Msa0900830 | 0.845226 | 4.633533e-59 | -8.615850e-47 |
| Msa0804170 | Msa0900830 | 0.818075 | 2.368931e-52 | -8.615850e-47 |
| Msa0805390 | Msa0900830 | 0.810692 | 1.015800e-50 | -8.615850e-47 |
| Msa0819150 | Msa0900830 | 0.806907 | 6.549612e-50 | -8.615850e-47 |
| Msa0830930 | Msa0900830 | 0.801915 | 7.187838e-49 | -8.615850e-47 |
| Msa0120860 | Msa0900830 | 0.805999 | 1.017587e-49 | -8.615850e-47 |
| Msa0147680 | Msa0900830 | 0.827585 | 1.442028e-54 | -8.615850e-47 |
| Msa0156530 | Msa0900830 | 0.813533 | 2.439418e-51 | -8.615850e-47 |
| Msa0173250 | Msa0900830 | 0.816991 | 4.157382e-52 | -8.615850e-47 |
| Msa0192050 | Msa0900830 | 0.811037 | 8.552903e-51 | -8.615850e-47 |
| Msa0206370 | Msa0900830 | 0.817457 | 3.264461e-52 | -8.615850e-47 |
| Msa0210790 | Msa0900830 | 0.811744 | 6.008142e-51 | -8.615850e-47 |
| Msa0225070 | Msa0900830 | -0.806072 | 9.822081e-50 | -8.615850e-47 |
| Msa0236940 | Msa0900830 | 0.814276 | 1.672627e-51 | -8.615850e-47 |
| Msa0372100 | Msa0900830 | 0.824188 | 9.239139e-54 | -8.615850e-47 |
| Msa0373550 | Msa0900830 | 0.836282 | 1.025449e-56 | -8.615850e-47 |
| Msa0379480 | Msa0900830 | 0.822124 | 2.801070e-53 | -8.615850e-47 |
| Msa0386910 | Msa0900830 | 0.808614 | 2.839868e-50 | -8.615850e-47 |
| Msa0388210 | Msa0900830 | 0.803769 | 2.976486e-49 | -8.615850e-47 |
| Msa0397130 | Msa0900830 | 0.804504 | 2.092466e-49 | -8.615850e-47 |
| Msa0416030 | Msa0900830 | 0.816079 | 6.653515e-52 | -8.615850e-47 |
| Msa0422070 | Msa0900830 | 0.817970 | 2.500815e-52 | -8.615850e-47 |
| Msa0433630 | Msa0900830 | 0.809936 | 1.478734e-50 | -8.615850e-47 |
| Msa0452770 | Msa0900830 | 0.818269 | 2.140791e-52 | -8.615850e-47 |
| Msa0457070 | Msa0900830 | -0.805117 | 1.558065e-49 | -8.615850e-47 |
| Msa0468660 | Msa0900830 | 0.822880 | 1.869573e-53 | -8.615850e-47 |
| Msa0480280 | Msa0900830 | 0.804168 | 2.458727e-49 | -8.615850e-47 |
| Msa0240590 | Msa0900830 | -0.815216 | 1.035788e-51 | -8.615850e-47 |
| Msa0242720 | Msa0900830 | 0.811683 | 6.193695e-51 | -8.615850e-47 |
| Msa0260980 | Msa0900830 | 0.816441 | 5.522565e-52 | -8.615850e-47 |
| Msa0340270 | Msa0900830 | 0.803609 | 3.212892e-49 | -8.615850e-47 |
| Msa0356640 | Msa0900830 | 0.819911 | 9.054831e-53 | -8.615850e-47 |
| Msa0358470 | Msa0900830 | 0.834788 | 2.447563e-56 | -8.615850e-47 |
| Msa0495620 | Msa0900830 | 0.819366 | 1.206090e-52 | -8.615850e-47 |
| Msa0514540 | Msa0900830 | 0.843718 | 1.179693e-58 | -8.615850e-47 |
| Msa0521510 | Msa0900830 | 0.831357 | 1.747802e-55 | -8.615850e-47 |
| Msa0521530 | Msa0900830 | 0.820997 | 5.102294e-53 | -8.615850e-47 |
| Msa0528310 | Msa0900830 | 0.805649 | 1.205809e-49 | -8.615850e-47 |
| Msa0549870 | Msa0900830 | 0.836366 | 9.759634e-57 | -8.615850e-47 |
| Msa0549960 | Msa0900830 | 0.800790 | 1.221510e-48 | -8.615850e-47 |
| Msa0550100 | Msa0900830 | 0.819052 | 1.421711e-52 | -8.615850e-47 |
| Msa0566460 | Msa0900830 | 0.859830 | 3.152219e-63 | -8.615850e-47 |
| Msa0580380 | Msa0900830 | 0.807511 | 4.878347e-50 | -8.615850e-47 |
| Msa0583390 | Msa0900830 | 0.808280 | 3.346627e-50 | -8.615850e-47 |
| Msa0587180 | Msa0900830 | 0.811346 | 7.329873e-51 | -8.615850e-47 |
| Msa0852890 | Msa0900830 | 0.811537 | 6.661570e-51 | -8.615850e-47 |
| Msa0871420 | Msa0900830 | 0.801849 | 7.415208e-49 | -8.615850e-47 |
| Msa0880910 | Msa0900830 | 0.805048 | 1.611141e-49 | -8.615850e-47 |
| Msa0900830 | Msa0921860 | 0.808053 | 3.740243e-50 | -8.615850e-47 |
| Msa0900830 | Msa0926240 | 0.937585 | 2.727309e-98 | -8.615850e-47 |
| Msa0900830 | Msa0932140 | 0.825670 | 4.131234e-54 | -8.615850e-47 |
| Msa0900830 | Msa0932150 | 0.818131 | 2.300024e-52 | -8.615850e-47 |
| Msa0900830 | Msa0936630 | 0.815191 | 1.049286e-51 | -8.615850e-47 |
| Msa0900830 | Msa0945900 | 0.809088 | 2.248863e-50 | -8.615850e-47 |
| Msa0900830 | Msa0965800 | 0.924392 | 7.489234e-90 | -8.615850e-47 |
| Msa0900830 | Msa0966120 | 0.818408 | 1.991570e-52 | -8.615850e-47 |
| Msa0900830 | Msa0967780 | 0.806986 | 6.301653e-50 | -8.615850e-47 |
| Msa0900830 | Msa0970270 | 0.806073 | 9.819130e-50 | -8.615850e-47 |
| Msa0900830 | Msa0981670 | 0.808142 | 3.582012e-50 | -8.615850e-47 |
| Msa0900830 | Msa0987670 | 0.814178 | 1.758497e-51 | -8.615850e-47 |
| Msa0900830 | Msa1011800 | 0.810007 | 1.427447e-50 | -8.615850e-47 |
| Msa0900830 | Msa1015560 | 0.802449 | 5.581609e-49 | -8.615850e-47 |
| Msa0900830 | Msa1021560 | 0.809438 | 1.892071e-50 | -8.615850e-47 |
| Msa0900830 | Msa1026710 | 0.807905 | 4.022753e-50 | -8.615850e-47 |
| Msa0900830 | Msa1053310 | 0.808085 | 3.682637e-50 | -8.615850e-47 |
| Msa0900830 | Msa1053340 | 0.825832 | 3.781244e-54 | -8.615850e-47 |
| Msa0900830 | Msa1055520 | -0.800717 | 1.264430e-48 | -8.615850e-47 |
| Msa0900830 | Msa1056890 | 0.802363 | 5.813272e-49 | -8.615850e-47 |
| Msa0900830 | Msa1078590 | -0.803089 | 4.117578e-49 | -8.615850e-47 |
| Msa0900830 | Msa1078760 | -0.808200 | 3.481652e-50 | -8.615850e-47 |
| Msa0900830 | Msa1093190 | -0.819791 | 9.645214e-53 | -8.615850e-47 |
| Msa0900830 | Msa1095410 | 0.805394 | 1.363474e-49 | -8.615850e-47 |
| Msa0900830 | Msa1118170 | 0.800969 | 1.123016e-48 | -8.615850e-47 |
| Msa0900830 | Msa1124210 | 0.823232 | 1.547650e-53 | -8.615850e-47 |
| Msa0900830 | Msa1127200 | 0.803856 | 2.854311e-49 | -8.615850e-47 |
| Msa0900830 | Msa1132850 | 0.855029 | 8.298377e-62 | -8.615850e-47 |
| Msa0900830 | Msa1142590 | 0.824851 | 6.450792e-54 | -8.615850e-47 |
| Msa0900830 | Msa1143490 | 0.800096 | 1.691763e-48 | -8.615850e-47 |
| Msa0900830 | Msa1146980 | 0.846106 | 2.675707e-59 | -8.615850e-47 |
| Msa0900830 | Msa1148930 | 0.812097 | 5.030835e-51 | -8.615850e-47 |
| Msa0900830 | Msa1165460 | 0.821497 | 3.912290e-53 | -8.615850e-47 |
| Msa0900830 | Msa1168310 | 0.800255 | 1.570592e-48 | -8.615850e-47 |
| Msa0900830 | Msa1179340 | 0.813369 | 2.650443e-51 | -8.615850e-47 |
| Msa0900830 | Msa1186670 | 0.825918 | 3.607461e-54 | -8.615850e-47 |
| Msa0900830 | Msa1197720 | 0.835331 | 1.785679e-56 | -8.615850e-47 |
| Msa0900830 | Msa1205270 | -0.807871 | 4.090302e-50 | -8.615850e-47 |
| Msa0900830 | Msa1211130 | 0.807377 | 5.207043e-50 | -8.615850e-47 |
| Msa0900830 | Msa1217890 | 0.813309 | 2.731905e-51 | -8.615850e-47 |
| Msa0900830 | Msa1220580 | 0.810834 | 9.462850e-51 | -8.615850e-47 |
| Msa0900830 | Msa1225890 | 0.809222 | 2.104907e-50 | -8.615850e-47 |
| Msa0900830 | Msa1251410 | 0.825734 | 3.988841e-54 | -8.615850e-47 |
| Msa0900830 | Msa1275220 | 0.802982 | 4.331855e-49 | -8.615850e-47 |
| Msa0900830 | Msa1313720 | 0.806380 | 8.459641e-50 | -8.615850e-47 |
| Msa0900830 | Msa1328280 | 0.816101 | 6.577053e-52 | -8.615850e-47 |
| Msa0900830 | Msa1334560 | 0.813020 | 3.162535e-51 | -8.615850e-47 |
| Msa0900830 | Msa1342760 | 0.810689 | 1.017237e-50 | -8.615850e-47 |
| Msa0900830 | Msa1352580 | 0.816618 | 5.039292e-52 | -8.615850e-47 |
| Msa0900830 | Msa1361980 | 0.846196 | 2.527559e-59 | -8.615850e-47 |
| Msa0900830 | Msa1363010 | 0.819818 | 9.510771e-53 | -8.615850e-47 |
| Msa0900830 | Msa1371800 | 0.800277 | 1.553959e-48 | -8.615850e-47 |
| Msa0900830 | Msa1379940 | 0.801776 | 7.674497e-49 | -8.615850e-47 |
| Msa0900830 | Msa1395050 | 0.859834 | 3.144665e-63 | -8.615850e-47 |
| Msa0900830 | Msa1402010 | 0.812040 | 5.178981e-51 | -8.615850e-47 |
| Msa0900830 | Msa1413020 | 0.822783 | 1.968796e-53 | -8.615850e-47 |
| Msa0900830 | Msa1438510 | 0.827120 | 1.864311e-54 | -8.615850e-47 |
| Msa0900830 | Msa1462780 | 0.852074 | 5.859275e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0900830 | MtrunA17_Chr6g0487071 | 90.524 | 496 | 9 | 1 | 1 | 458 | 1 | 496 | 0.0 | 884 |
| Msa0900830 | MtrunA17_Chr8g0389821 | 71.245 | 466 | 96 | 1 | 31 | 458 | 33 | 498 | 0.0 | 676 |
| Msa0900830 | MtrunA17_Chr8g0340741 | 61.866 | 493 | 147 | 4 | 1 | 453 | 1 | 492 | 0.0 | 594 |
| Msa0900830 | MtrunA17_Chr1g0156571 | 51.770 | 452 | 180 | 3 | 38 | 452 | 42 | 492 | 4.15e-154 | 446 |
| Msa0900830 | MtrunA17_Chr5g0396421 | 47.966 | 467 | 193 | 5 | 31 | 450 | 33 | 496 | 8.60e-142 | 415 |
| Msa0900830 | MtrunA17_Chr4g0054541 | 54.015 | 137 | 57 | 2 | 218 | 354 | 1 | 131 | 3.44e-42 | 147 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0900830 | AT4G29130.1 | 64.606 | 469 | 128 | 1 | 23 | 453 | 25 | 493 | 0.0 | 620 |
| Msa0900830 | AT2G19860.1 | 62.368 | 473 | 140 | 1 | 23 | 457 | 25 | 497 | 0.0 | 607 |
| Msa0900830 | AT2G19860.2 | 61.340 | 388 | 112 | 1 | 108 | 457 | 1 | 388 | 9.22e-173 | 490 |
| Msa0900830 | AT1G47840.1 | 48.565 | 453 | 193 | 5 | 38 | 452 | 43 | 493 | 5.87e-141 | 413 |
| Msa0900830 | AT1G50460.1 | 45.806 | 465 | 203 | 5 | 31 | 448 | 33 | 495 | 2.22e-134 | 397 |
| Msa0900830 | AT3G20040.1 | 45.339 | 472 | 213 | 4 | 23 | 450 | 25 | 495 | 4.21e-125 | 373 |
| Msa0900830 | AT1G50460.2 | 52.454 | 326 | 153 | 2 | 31 | 356 | 33 | 356 | 4.52e-116 | 345 |
| Msa0900830 | AT1G47840.2 | 55.346 | 318 | 139 | 3 | 38 | 354 | 43 | 358 | 7.65e-116 | 345 |
| Msa0900830 | AT1G50460.3 | 44.691 | 405 | 175 | 5 | 91 | 448 | 17 | 419 | 4.85e-109 | 329 |
| Msa0900830 | AT4G37840.1 | 40.169 | 473 | 213 | 8 | 30 | 447 | 25 | 482 | 1.47e-106 | 325 |
| Msa0900830 | AT1G47845.1 | 47.525 | 101 | 49 | 3 | 257 | 354 | 18 | 117 | 2.36e-20 | 89.0 |
Find 141 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAATTTCTGGCATGTATT+TGG | 0.135183 | 6_1:-97019562 | Msa0900830:CDS |
| AGCTTCTCAGTCCCAATATT+TGG | 0.142165 | 6_1:-97018317 | Msa0900830:CDS |
| GGTACAACACCGTGCCATTT+TGG | 0.208007 | 6_1:+97020166 | None:intergenic |
| GGGTTTCACGTTCTCATTTC+CGG | 0.245570 | 6_1:-97021096 | Msa0900830:CDS |
| CATACCATCTTTCCTGATTT+CGG | 0.276283 | 6_1:+97020145 | None:intergenic |
| ACTCTTCCACTCCCAAATAT+TGG | 0.279584 | 6_1:+97018305 | None:intergenic |
| GTCCTCTCCCTGGAAGAAAA+AGG | 0.279592 | 6_1:-97021124 | Msa0900830:CDS |
| CAGTAGAGGAAGATGGAAAA+TGG | 0.284596 | 6_1:+97022675 | None:intergenic |
| GCTGCGGCGGCGGTGGTGGT+AGG | 0.287717 | 6_1:-97022575 | Msa0900830:CDS |
| TTTGTTGATAATCTTCCATC+TGG | 0.294263 | 6_1:-97022371 | Msa0900830:CDS |
| CGTGCCCTTCGTATCCAATT+AGG | 0.303217 | 6_1:-97021380 | Msa0900830:CDS |
| GCTTGATCGTATTCTGTTAG+AGG | 0.309758 | 6_1:+97019707 | None:intergenic |
| ATAATTTCTGGCATGTATTT+GGG | 0.335429 | 6_1:-97019561 | Msa0900830:CDS |
| TCCAACGACGGCTCTGGAAT+TGG | 0.339592 | 6_1:-97018355 | Msa0900830:CDS |
| GGCTGCTGCGGCGGCGGTGG+TGG | 0.340407 | 6_1:-97022579 | Msa0900830:CDS |
| GTAAAGAGGGGTGTGGAAAG+TGG | 0.342963 | 6_1:-97022541 | Msa0900830:CDS |
| GAGCTGTCACGCGCATTTGC+AGG | 0.345190 | 6_1:+97020445 | None:intergenic |
| GGCGGCTGCTGCGGCGGCGG+TGG | 0.360897 | 6_1:-97022582 | Msa0900830:CDS |
| ATGTCAATGCAATTCCAAAA+TGG | 0.362928 | 6_1:-97020180 | Msa0900830:CDS |
| GACATCCTGATTGCTGAATC+TGG | 0.364536 | 6_1:+97020252 | None:intergenic |
| TGTATTTGGGTGACATTGTA+AGG | 0.382660 | 6_1:-97019548 | Msa0900830:CDS |
| CTGATATTGTTTCTGTTCGT+GGG | 0.383645 | 6_1:-97018579 | Msa0900830:CDS |
| GGTGGCGGCTGCTGCGGCGG+CGG | 0.383739 | 6_1:-97022585 | Msa0900830:CDS |
| AATAGCAGCAGCAGCGAGGC+GGG | 0.384352 | 6_1:+97018555 | None:intergenic |
| GCTTCTCAGTCCCAATATTT+GGG | 0.384463 | 6_1:-97018316 | Msa0900830:CDS |
| TGAGAATTCCTTTCATACTT+AGG | 0.384705 | 6_1:-97019464 | Msa0900830:intron |
| GGGAGAGGACGAAACTCTTC+AGG | 0.386617 | 6_1:+97021137 | None:intergenic |
| CTCTTCCACTCCCAAATATT+GGG | 0.395121 | 6_1:+97018306 | None:intergenic |
| TGTTGAAATGCAAAATGGTT+TGG | 0.397420 | 6_1:-97022432 | Msa0900830:CDS |
| CACGGTGTTGTACCGAAATC+AGG | 0.400642 | 6_1:-97020157 | Msa0900830:CDS |
| TAAATATGCTGCATTTGTTC+CGG | 0.402362 | 6_1:+97020207 | None:intergenic |
| TATCTCTTCCCAATTTCCTT+AGG | 0.406199 | 6_1:+97018524 | None:intergenic |
| GAACATTCCAACGACGGCTC+TGG | 0.410210 | 6_1:-97018361 | Msa0900830:CDS |
| TTTGGCATCCTAAGGAAATT+GGG | 0.423884 | 6_1:-97018532 | Msa0900830:CDS |
| ATAGGTTATAAACATGGAAT+GGG | 0.427701 | 6_1:-97019753 | Msa0900830:intron |
| AGGAGGAATTGAAACTTCTT+CGG | 0.427820 | 6_1:+97021325 | None:intergenic |
| CTGCGGCGGCGGTGGTGGTA+GGG | 0.428502 | 6_1:-97022574 | Msa0900830:CDS |
| GTCATCGCCGGTGTAATTCT+TGG | 0.428725 | 6_1:-97020232 | Msa0900830:CDS |
| ATGGTTGTTGAAATGCAAAA+TGG | 0.429549 | 6_1:-97022437 | Msa0900830:CDS |
| TCTGATATTGTTTCTGTTCG+TGG | 0.430959 | 6_1:-97018580 | Msa0900830:CDS |
| GGCGGTGGTGGCGGCTGCTG+CGG | 0.432642 | 6_1:-97022591 | Msa0900830:CDS |
| CAGCTTAAACCCTGGAGAAC+AGG | 0.435546 | 6_1:-97019672 | Msa0900830:intron |
| AGCTACGGTGGCGGTGGTGG+CGG | 0.443924 | 6_1:-97022600 | Msa0900830:CDS |
| ATAACCATTACCTGTTCTCC+AGG | 0.445092 | 6_1:+97019662 | None:intergenic |
| AGTAGCTACGGTGGCGGTGG+TGG | 0.446361 | 6_1:-97022603 | Msa0900830:CDS |
| GAGGAGATATTGAAGGTGTT+TGG | 0.451346 | 6_1:-97022509 | Msa0900830:CDS |
| TAAAGCCAGATTCAGCAATC+AGG | 0.452297 | 6_1:-97020257 | Msa0900830:CDS |
| GCAATCGATGTTTGCCTCAC+CGG | 0.452708 | 6_1:+97021077 | None:intergenic |
| TAAAGAGGGGTGTGGAAAGT+GGG | 0.456309 | 6_1:-97022540 | Msa0900830:CDS |
| AGGCAAACATCGATTGCATC+CGG | 0.459586 | 6_1:-97021071 | Msa0900830:CDS |
| AGTAGAGGAAGATGGAAAAT+GGG | 0.459801 | 6_1:+97022676 | None:intergenic |
| TATAGGTTATAAACATGGAA+TGG | 0.464247 | 6_1:-97019754 | Msa0900830:intron |
| CTGTTCTCCAGGGTTTAAGC+TGG | 0.473065 | 6_1:+97019673 | None:intergenic |
| GGTGGTGGCGGCTGCTGCGG+CGG | 0.477674 | 6_1:-97022588 | Msa0900830:CDS |
| GAGTACACTAAGGGAGTTGT+TGG | 0.480576 | 6_1:-97018413 | Msa0900830:CDS |
| ATTCCTCCTCATTTGATGAC+CGG | 0.481221 | 6_1:-97021311 | Msa0900830:CDS |
| TTCATCATTTGACTCAGTAA+TGG | 0.483421 | 6_1:-97022633 | Msa0900830:exon |
| CAGACTTACATGTGAAGAAC+CGG | 0.485850 | 6_1:+97021292 | None:intergenic |
| CGGTGGTGGTAGGGCAGCAA+AGG | 0.490176 | 6_1:-97022565 | Msa0900830:CDS |
| GAAGAGATACGGTAAAGGCC+GGG | 0.491971 | 6_1:-97018510 | Msa0900830:CDS |
| CGCCACCGTAGCTACTATCT+TGG | 0.493817 | 6_1:+97022610 | None:intergenic |
| GAAGAGTTTCGTCCTCTCCC+TGG | 0.496420 | 6_1:-97021134 | Msa0900830:CDS |
| ACTCCACTTTATTAGAGTCC+CGG | 0.498137 | 6_1:+97021052 | None:intergenic |
| AGGTTTCAATATTGAGGATG+TGG | 0.499732 | 6_1:-97021027 | Msa0900830:intron |
| GAGTAAAGGTTTCAATATTG+AGG | 0.503775 | 6_1:-97021033 | Msa0900830:CDS |
| GATGCGGCCAGCTTAAACCC+TGG | 0.506758 | 6_1:-97019680 | Msa0900830:CDS |
| GATGAAGCATCCGGGACAAT+CGG | 0.507054 | 6_1:-97018388 | Msa0900830:CDS |
| TGGTGAACTAACCAAGTCCT+TGG | 0.511360 | 6_1:-97020478 | Msa0900830:CDS |
| ATTATTTATAGGGATGAGAA+AGG | 0.515372 | 6_1:-97021440 | Msa0900830:intron |
| TGGAAAGTGGGAAAAGGTTG+AGG | 0.517690 | 6_1:-97022528 | Msa0900830:CDS |
| TTGTTGGGAGATGAAGCATC+CGG | 0.517867 | 6_1:-97018397 | Msa0900830:CDS |
| GGGGTGTGGAAAGTGGGAAA+AGG | 0.520221 | 6_1:-97022534 | Msa0900830:CDS |
| TTGTTGATAATCTTCCATCT+GGG | 0.524059 | 6_1:-97022370 | Msa0900830:intron |
| GAGGAAGATGGAAAATGGGT+TGG | 0.530082 | 6_1:+97022680 | None:intergenic |
| AAGAGATACGGTAAAGGCCG+GGG | 0.530904 | 6_1:-97018509 | Msa0900830:CDS |
| ACTCTAATAAAGTGGAGTAA+AGG | 0.533366 | 6_1:-97021047 | Msa0900830:CDS |
| GGCTTTAGCTACTGTTCCAA+CGG | 0.533554 | 6_1:+97020273 | None:intergenic |
| AAGGAAATTGGGAAGAGATA+CGG | 0.535118 | 6_1:-97018521 | Msa0900830:CDS |
| GGAAGAGATACGGTAAAGGC+CGG | 0.539448 | 6_1:-97018511 | Msa0900830:CDS |
| CATCCGGGACTCTAATAAAG+TGG | 0.545490 | 6_1:-97021055 | Msa0900830:CDS |
| CAATTAGGTGGAAAAGAGAA+AGG | 0.547032 | 6_1:-97021365 | Msa0900830:CDS |
| TTTGTGTCAGTAGAGGAAGA+TGG | 0.549553 | 6_1:+97022668 | None:intergenic |
| TTCCACCTAATTGGATACGA+AGG | 0.550973 | 6_1:+97021375 | None:intergenic |
| GGGCAGCAAAGGAGTAAAGA+GGG | 0.552535 | 6_1:-97022554 | Msa0900830:CDS |
| GATAGTAGCTACGGTGGCGG+TGG | 0.554110 | 6_1:-97022606 | Msa0900830:CDS |
| TGTACCGAAATCAGGAAAGA+TGG | 0.555989 | 6_1:-97020149 | Msa0900830:intron |
| TCCACCTAATTGGATACGAA+GGG | 0.557329 | 6_1:+97021376 | None:intergenic |
| TCAGTCCCAATATTTGGGAG+TGG | 0.559079 | 6_1:-97018311 | Msa0900830:CDS |
| CGCGAAATTCAGAACATGCA+TGG | 0.559310 | 6_1:-97018437 | Msa0900830:CDS |
| AAAGGTTGAGGAGATATTGA+AGG | 0.560489 | 6_1:-97022516 | Msa0900830:CDS |
| GCCGGTGTAATTCTTGGTAC+CGG | 0.560513 | 6_1:-97020226 | Msa0900830:CDS |
| GGACTGAGAAGCTGCAAGGA+GGG | 0.568050 | 6_1:+97018327 | None:intergenic |
| AGGGCAGCAAAGGAGTAAAG+AGG | 0.568209 | 6_1:-97022555 | Msa0900830:CDS |
| AAGGAGAGTACTACTGAAGA+TGG | 0.568422 | 6_1:-97019529 | Msa0900830:CDS |
| TCATCATACCTAAGTATGAA+AGG | 0.568524 | 6_1:+97019456 | None:intergenic |
| TATGAAAGGAATTCTCAACT+TGG | 0.570144 | 6_1:+97019470 | None:intergenic |
| AGCAATCAGGATGTCATCGC+CGG | 0.572183 | 6_1:-97020244 | Msa0900830:CDS |
| AGTACACTAAGGGAGTTGTT+GGG | 0.576154 | 6_1:-97018412 | Msa0900830:CDS |
| AGCAAAGAGAATAACCCAGA+TGG | 0.576188 | 6_1:+97022356 | None:intergenic |
| GAAGAGTGTTGCTGAAGCTA+TGG | 0.578537 | 6_1:-97022456 | Msa0900830:CDS |
| GGCAAACATCGATTGCATCC+GGG | 0.583297 | 6_1:-97021070 | Msa0900830:CDS |
| ATGTTCGATTCCGATTGTCC+CGG | 0.583578 | 6_1:+97018378 | None:intergenic |
| ATGAAAGGAATTCTCAACTT+GGG | 0.584176 | 6_1:+97019471 | None:intergenic |
| TAGGTCGGAGAAGATATAGT+TGG | 0.584505 | 6_1:-97020498 | Msa0900830:CDS |
| TGTTGGGAGATGAAGCATCC+GGG | 0.586853 | 6_1:-97018396 | Msa0900830:CDS |
| AAATAGCAGCAGCAGCGAGG+CGG | 0.590689 | 6_1:+97018554 | None:intergenic |
| AAATCAGTGATAGCATTGGA+TGG | 0.591545 | 6_1:-97018478 | Msa0900830:CDS |
| GCCCTTCGTATCCAATTAGG+TGG | 0.595528 | 6_1:-97021377 | Msa0900830:CDS |
| AAAAGTGAGGAAGATTGTTG+TGG | 0.601065 | 6_1:-97018606 | Msa0900830:intron |
| TCCAATTCCAGAGCCGTCGT+TGG | 0.604490 | 6_1:+97018354 | None:intergenic |
| GAAGAACCGGTCATCAAATG+AGG | 0.604505 | 6_1:+97021305 | None:intergenic |
| CATGCATGGAGAGTACACTA+AGG | 0.606091 | 6_1:-97018423 | Msa0900830:CDS |
| TAACCATTACCTGTTCTCCA+GGG | 0.606985 | 6_1:+97019663 | None:intergenic |
| CAAAGGAGTAAAGAGGGGTG+TGG | 0.608663 | 6_1:-97022548 | Msa0900830:CDS |
| TCACGTTCTCATTTCCGGTG+AGG | 0.609195 | 6_1:-97021091 | Msa0900830:CDS |
| CAAAATGGTTTGGAGAATGA+AGG | 0.613258 | 6_1:-97022422 | Msa0900830:CDS |
| AATGGCCAAGATAGTAGCTA+CGG | 0.620734 | 6_1:-97022615 | Msa0900830:CDS |
| TGATATTGTTTCTGTTCGTG+GGG | 0.621150 | 6_1:-97018578 | Msa0900830:CDS |
| CAAGATAGTAGCTACGGTGG+CGG | 0.623655 | 6_1:-97022609 | Msa0900830:CDS |
| CACGGAAGTTTGTGCCACCA+AGG | 0.624728 | 6_1:+97021399 | None:intergenic |
| ACTTCTATAGGTTATAAACA+TGG | 0.633077 | 6_1:-97019759 | Msa0900830:intron |
| ATGTAGATTAACGACACCGT+TGG | 0.633722 | 6_1:-97020289 | Msa0900830:intron |
| AAAGGAATTCTCAACTTGGG+AGG | 0.634267 | 6_1:+97019474 | None:intergenic |
| TTAGAGGAAGATGCGAGGAA+CGG | 0.635609 | 6_1:+97019723 | None:intergenic |
| TCCGGTACCAAGAATTACAC+CGG | 0.638972 | 6_1:+97020225 | None:intergenic |
| ATTGGGACTGAGAAGCTGCA+AGG | 0.639823 | 6_1:+97018323 | None:intergenic |
| ATTGGGAAGAGATACGGTAA+AGG | 0.641573 | 6_1:-97018515 | Msa0900830:CDS |
| GAACCGGTCATCAAATGAGG+AGG | 0.648083 | 6_1:+97021308 | None:intergenic |
| AATGCAATTCCAAAATGGCA+CGG | 0.652771 | 6_1:-97020175 | Msa0900830:CDS |
| AATGGTTTGGAGAATGAAGG+TGG | 0.654227 | 6_1:-97022419 | Msa0900830:CDS |
| GGCAGCAAAGGAGTAAAGAG+GGG | 0.655437 | 6_1:-97022553 | Msa0900830:CDS |
| CTAATTGGATACGAAGGGCA+CGG | 0.658298 | 6_1:+97021381 | None:intergenic |
| AGATGGAAGATTATCAACAA+AGG | 0.662452 | 6_1:+97022373 | None:intergenic |
| ATGCATGGAGAGTACACTAA+GGG | 0.666874 | 6_1:-97018422 | Msa0900830:CDS |
| GGCCAAGATAGTAGCTACGG+TGG | 0.672952 | 6_1:-97022612 | Msa0900830:CDS |
| TAGGTTATAAACATGGAATG+GGG | 0.677198 | 6_1:-97019752 | Msa0900830:CDS |
| ATACGATCAAGCTCTAGATG+CGG | 0.680431 | 6_1:-97019696 | Msa0900830:CDS |
| TCAGTGATAGCATTGGATGG+AGG | 0.680482 | 6_1:-97018475 | Msa0900830:CDS |
| TTCTGTTAGAGGAAGATGCG+AGG | 0.686859 | 6_1:+97019718 | None:intergenic |
| GGGACTGAGAAGCTGCAAGG+AGG | 0.687192 | 6_1:+97018326 | None:intergenic |
| GGAATCGAACATTCCAACGA+CGG | 0.711066 | 6_1:-97018367 | Msa0900830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGTTTTTGTTTTTAATTT+TGG | - | chr6_1:97019157-97019176 | Msa0900830:intron | 10.0% |
| !!! | TTGTTTTTGTTTTTAATTTT+GGG | - | chr6_1:97019158-97019177 | Msa0900830:intron | 10.0% |
| !!! | TGAAATAATAAACATTTTTA+GGG | + | chr6_1:97019792-97019811 | None:intergenic | 10.0% |
| !!! | ATGAAATAATAAACATTTTT+AGG | + | chr6_1:97019793-97019812 | None:intergenic | 10.0% |
| !! | AATTTAATATATAAGAATCA+AGG | + | chr6_1:97020020-97020039 | None:intergenic | 10.0% |
| !!! | ATATTAAATTTTATTTGCAT+CGG | - | chr6_1:97020030-97020049 | Msa0900830:intron | 10.0% |
| !! | TATAATAATACTAACATAAA+TGG | + | chr6_1:97020195-97020214 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTAAAATGTTTCT+TGG | - | chr6_1:97020672-97020691 | Msa0900830:intron | 10.0% |
| !!! | TTTGTTTATGTTTATGTTTT+TGG | - | chr6_1:97018768-97018787 | Msa0900830:intron | 15.0% |
| !!! | ATTTATGTGTTTTTTGTTTA+TGG | - | chr6_1:97018964-97018983 | Msa0900830:intron | 15.0% |
| !!! | AAATTTGTGTTTTTTGTTTT+TGG | - | chr6_1:97019450-97019469 | Msa0900830:intron | 15.0% |
| !! | ATTAATAGTTTACAATTTCA+GGG | + | chr6_1:97021051-97021070 | None:intergenic | 15.0% |
| !!! | ATTAAAATTTTGCAATTTCA+GGG | - | chr6_1:97021117-97021136 | Msa0900830:CDS | 15.0% |
| !! | TGATCTAAATAAGATAAATT+AGG | + | chr6_1:97021700-97021719 | None:intergenic | 15.0% |
| !! | AAAAAAATTGAAGGATATAT+TGG | - | chr6_1:97022182-97022201 | Msa0900830:intron | 15.0% |
| !!! | ATTTTGCATGTTTATGTTTT+TGG | - | chr6_1:97018713-97018732 | Msa0900830:intron | 20.0% |
| !! | TGATCATTACAAACAATTAT+TGG | + | chr6_1:97019338-97019357 | None:intergenic | 20.0% |
| !! | AACAAAAAACACAAATTTCT+AGG | + | chr6_1:97019448-97019467 | None:intergenic | 20.0% |
| !! | AAGTTAAAAAATACCCAAAA+AGG | + | chr6_1:97019543-97019562 | None:intergenic | 20.0% |
| !! | GTTTATTATTTCATTACTAC+AGG | - | chr6_1:97019799-97019818 | Msa0900830:intron | 20.0% |
| !! | AACTAGAAATGTATTAATGT+AGG | + | chr6_1:97020361-97020380 | None:intergenic | 20.0% |
| !! | AATTAGAATGACAATGAATA+GGG | + | chr6_1:97020441-97020460 | None:intergenic | 20.0% |
| !! | GATTAATAGTTTACAATTTC+AGG | + | chr6_1:97021052-97021071 | None:intergenic | 20.0% |
| !!! | GATTAAAATTTTGCAATTTC+AGG | - | chr6_1:97021116-97021135 | Msa0900830:CDS | 20.0% |
| !!! | TATTTACTCATTTTAGTTGT+TGG | - | chr6_1:97021205-97021224 | Msa0900830:intron | 20.0% |
| !! | CTGAATATTATTACTTCTAT+AGG | - | chr6_1:97021238-97021257 | Msa0900830:intron | 20.0% |
| !!! | ATTTTTGAGAAGATAATTTC+TGG | - | chr6_1:97021436-97021455 | Msa0900830:intron | 20.0% |
| !! | TCTAAATAAGATAAATTAGG+AGG | + | chr6_1:97021697-97021716 | None:intergenic | 20.0% |
| !! | AAAATAATGAACAAGAATGA+TGG | + | chr6_1:97022050-97022069 | None:intergenic | 20.0% |
| !!! | TATAATCTTGCAGTAAATTT+TGG | - | chr6_1:97022264-97022283 | Msa0900830:intron | 20.0% |
| !! | TGATGAAAGATTATAAACAA+TGG | + | chr6_1:97022295-97022314 | None:intergenic | 20.0% |
| !! | TTATCAATCTAAAGAAAAGA+TGG | + | chr6_1:97022374-97022393 | None:intergenic | 20.0% |
| ! | AAAACACATAAATTTGAGTG+AGG | + | chr6_1:97018957-97018976 | None:intergenic | 25.0% |
| ! | TCAAGAACTCTTTAACAAAA+AGG | + | chr6_1:97019005-97019024 | None:intergenic | 25.0% |
| !!! | GTGTTTATTGTTTCTGTTTT+TGG | - | chr6_1:97019085-97019104 | Msa0900830:intron | 25.0% |
| ! | TGATTCTCAATTATTGAACA+AGG | + | chr6_1:97019132-97019151 | None:intergenic | 25.0% |
| ! | TTGAAATTCAGGATACAATA+CGG | - | chr6_1:97019422-97019441 | Msa0900830:intron | 25.0% |
| ! | ACTTCATAAACTCTTTAACA+TGG | + | chr6_1:97019491-97019510 | None:intergenic | 25.0% |
| ! | AAAAAATACCCAAAAAGGAA+TGG | + | chr6_1:97019538-97019557 | None:intergenic | 25.0% |
| !!! | TTGGGTATTTTTTAACTTTG+TGG | - | chr6_1:97019545-97019564 | Msa0900830:CDS | 25.0% |
| ! | AACTTTGTGGCATTATTTAT+AGG | - | chr6_1:97019558-97019577 | Msa0900830:CDS | 25.0% |
| ! | ACTTTGTGGCATTATTTATA+GGG | - | chr6_1:97019559-97019578 | Msa0900830:CDS | 25.0% |
| ! | ATTATTTATAGGGATGAGAA+AGG | - | chr6_1:97019569-97019588 | Msa0900830:CDS | 25.0% |
| ! | TATTAACTAAGCAGAATCAA+TGG | + | chr6_1:97019764-97019783 | None:intergenic | 25.0% |
| !! | AGTATCGAATAACTAAAATG+TGG | - | chr6_1:97020267-97020286 | Msa0900830:CDS | 25.0% |
| ! | GTATCGAATAACTAAAATGT+GGG | - | chr6_1:97020268-97020287 | Msa0900830:CDS | 25.0% |
| ! | AATAACTAAAATGTGGGTAA+TGG | - | chr6_1:97020274-97020293 | Msa0900830:CDS | 25.0% |
| ! | CAATTAGAATGACAATGAAT+AGG | + | chr6_1:97020442-97020461 | None:intergenic | 25.0% |
| ! | ATTGTCATTCTAATTGAATG+TGG | - | chr6_1:97020446-97020465 | Msa0900830:CDS | 25.0% |
| !!! | TTGGAATATTGATAATGTGA+AGG | + | chr6_1:97021022-97021041 | None:intergenic | 25.0% |
| ! | ACATTATCAATATTCCAAAG+TGG | - | chr6_1:97021024-97021043 | Msa0900830:intron | 25.0% |
| !!! | TCGAAATATTGATAATGTGA+AGG | - | chr6_1:97021146-97021165 | Msa0900830:CDS | 25.0% |
| !!! | CGAAATATTGATAATGTGAA+GGG | - | chr6_1:97021147-97021166 | Msa0900830:CDS | 25.0% |
| !! | TATGTTGTCTTACATTTTCA+AGG | - | chr6_1:97021171-97021190 | Msa0900830:CDS | 25.0% |
| !!! | TACATTTTCAAGGACTAAAT+TGG | - | chr6_1:97021181-97021200 | Msa0900830:CDS | 25.0% |
| ! | ACTTCTATAGGTTATAAACA+TGG | - | chr6_1:97021250-97021269 | Msa0900830:intron | 25.0% |
| ! | TATAGGTTATAAACATGGAA+TGG | - | chr6_1:97021255-97021274 | Msa0900830:intron | 25.0% |
| ! | ATAGGTTATAAACATGGAAT+GGG | - | chr6_1:97021256-97021275 | Msa0900830:intron | 25.0% |
| !! | ATCTATAGTTGCTTTAAACA+CGG | - | chr6_1:97021368-97021387 | Msa0900830:CDS | 25.0% |
| !!! | ATAATTTCTGGCATGTATTT+GGG | - | chr6_1:97021448-97021467 | Msa0900830:intron | 25.0% |
| ! | TAAACAGAATCTTTAGTGTT+AGG | + | chr6_1:97021591-97021610 | None:intergenic | 25.0% |
| ! | ATCGCATTTCATTCAAAATT+TGG | - | chr6_1:97021621-97021640 | Msa0900830:intron | 25.0% |
| !!! | ATGAATTTTTTTGTGAACAG+TGG | - | chr6_1:97021644-97021663 | Msa0900830:intron | 25.0% |
| ! | CTTATTTAGATCATCTTCAA+TGG | - | chr6_1:97021707-97021726 | Msa0900830:intron | 25.0% |
| !! | GATTCTTAACATACTTTTAG+TGG | - | chr6_1:97021744-97021763 | Msa0900830:intron | 25.0% |
| ! | AGATTGCTTATTATAAGAAC+CGG | + | chr6_1:97021893-97021912 | None:intergenic | 25.0% |
| !! | TGTTTAATTTAGTATCGAAC+AGG | + | chr6_1:97021974-97021993 | None:intergenic | 25.0% |
| ! | TTCAATACAAAGAAAGTTGA+AGG | + | chr6_1:97022074-97022093 | None:intergenic | 25.0% |
| !!! | ACGTTCACATCTTTTTTTTA+TGG | - | chr6_1:97022093-97022112 | Msa0900830:intron | 25.0% |
| !!! | CGTTCACATCTTTTTTTTAT+GGG | - | chr6_1:97022094-97022113 | Msa0900830:intron | 25.0% |
| ! | AAAATTGAAGGATATATTGG+AGG | - | chr6_1:97022185-97022204 | Msa0900830:intron | 25.0% |
| TTCATCATTTGACTCAGTAA+TGG | - | chr6_1:97018376-97018395 | Msa0900830:CDS | 30.0% | |
| ATGGTTGTTGAAATGCAAAA+TGG | - | chr6_1:97018572-97018591 | Msa0900830:CDS | 30.0% | |
| TGTTGAAATGCAAAATGGTT+TGG | - | chr6_1:97018577-97018596 | Msa0900830:CDS | 30.0% | |
| AGATGGAAGATTATCAACAA+AGG | + | chr6_1:97018639-97018658 | None:intergenic | 30.0% | |
| !! | TTTGTTGATAATCTTCCATC+TGG | - | chr6_1:97018638-97018657 | Msa0900830:intron | 30.0% |
| !! | TTGTTGATAATCTTCCATCT+GGG | - | chr6_1:97018639-97018658 | Msa0900830:intron | 30.0% |
| AATTCATGAACTCTTCAACA+AGG | + | chr6_1:97019199-97019218 | None:intergenic | 30.0% | |
| ! | CTTTTGTTGAACTAAATGCT+TGG | - | chr6_1:97019243-97019262 | Msa0900830:intron | 30.0% |
| CAAACAATTATTGGAAAGTG+AGG | + | chr6_1:97019329-97019348 | None:intergenic | 30.0% | |
| ! | CATACCACGATTTAAAACAT+TGG | + | chr6_1:97019365-97019384 | None:intergenic | 30.0% |
| !! | CAATGTTTTAAATCGTGGTA+TGG | - | chr6_1:97019363-97019382 | Msa0900830:intron | 30.0% |
| ATTTCAAAATTCTCTCGCAA+CGG | + | chr6_1:97019409-97019428 | None:intergenic | 30.0% | |
| ACTCTAATAAAGTGGAGTAA+AGG | - | chr6_1:97019962-97019981 | Msa0900830:intron | 30.0% | |
| GAGTAAAGGTTTCAATATTG+AGG | - | chr6_1:97019976-97019995 | Msa0900830:intron | 30.0% | |
| AAGAGTTTATGTGGTACAAA+TGG | + | chr6_1:97020071-97020090 | None:intergenic | 30.0% | |
| CAAAGTATGACATATAACTC+AGG | + | chr6_1:97020159-97020178 | None:intergenic | 30.0% | |
| ACAGAATCACAATGAAGTAA+CGG | + | chr6_1:97020480-97020499 | None:intergenic | 30.0% | |
| AGTAATCGTTGAAAAGGTAA+AGG | + | chr6_1:97020622-97020641 | None:intergenic | 30.0% | |
| ! | TACCTTTTCAACGATTACTT+AGG | - | chr6_1:97020623-97020642 | Msa0900830:intron | 30.0% |
| ATCCTAAGTAATCGTTGAAA+AGG | + | chr6_1:97020628-97020647 | None:intergenic | 30.0% | |
| ATCAAAACCTAACTTGATGA+TGG | - | chr6_1:97020696-97020715 | Msa0900830:intron | 30.0% | |
| TAAATATGCTGCATTTGTTC+CGG | + | chr6_1:97020805-97020824 | None:intergenic | 30.0% | |
| ATGTCAATGCAATTCCAAAA+TGG | - | chr6_1:97020829-97020848 | Msa0900830:intron | 30.0% | |
| !! | TATAATTTTAGAGACCAACG+TGG | + | chr6_1:97020981-97021000 | None:intergenic | 30.0% |
| !! | TATTGATAATGTGAAGGACT+AGG | + | chr6_1:97021016-97021035 | None:intergenic | 30.0% |
| ATCAAGTTCATCTCTTTGTT+TGG | - | chr6_1:97021069-97021088 | Msa0900830:CDS | 30.0% | |
| TAGGTTATAAACATGGAATG+GGG | - | chr6_1:97021257-97021276 | Msa0900830:intron | 30.0% | |
| CAAAAATCTGCAAATAACAG+TGG | + | chr6_1:97021423-97021442 | None:intergenic | 30.0% | |
| !! | GATAATTTCTGGCATGTATT+TGG | - | chr6_1:97021447-97021466 | Msa0900830:intron | 30.0% |
| ATGAAAGGAATTCTCAACTT+GGG | + | chr6_1:97021541-97021560 | None:intergenic | 30.0% | |
| TATGAAAGGAATTCTCAACT+TGG | + | chr6_1:97021542-97021561 | None:intergenic | 30.0% | |
| TGAGAATTCCTTTCATACTT+AGG | - | chr6_1:97021545-97021564 | Msa0900830:intron | 30.0% | |
| TCATCATACCTAAGTATGAA+AGG | + | chr6_1:97021556-97021575 | None:intergenic | 30.0% | |
| ! | TAAATTCTAGTTGCCATTGT+AGG | + | chr6_1:97021777-97021796 | None:intergenic | 30.0% |
| TTGCAGTGAAAATTTCTTTG+AGG | + | chr6_1:97021804-97021823 | None:intergenic | 30.0% | |
| !!! | AGACTGGTTTTAACTTCTAA+AGG | + | chr6_1:97021842-97021861 | None:intergenic | 30.0% |
| !!! | ATCCCTTAAGATTTTAGAAC+CGG | - | chr6_1:97021871-97021890 | Msa0900830:intron | 30.0% |
| !! | AACCGGTTCTAAAATCTTAA+GGG | + | chr6_1:97021876-97021895 | None:intergenic | 30.0% |
| TCTCCAATGGTTTAATGTAT+AGG | - | chr6_1:97021941-97021960 | Msa0900830:intron | 30.0% | |
| CTCCAATGGTTTAATGTATA+GGG | - | chr6_1:97021942-97021961 | Msa0900830:intron | 30.0% | |
| TACCCTATACATTAAACCAT+TGG | + | chr6_1:97021947-97021966 | None:intergenic | 30.0% | |
| !!! | CTTTTTTTTATGGGACGTAT+AGG | - | chr6_1:97022103-97022122 | Msa0900830:intron | 30.0% |
| ATTGTATTTCTCCTATCCAA+AGG | - | chr6_1:97022322-97022341 | Msa0900830:intron | 30.0% | |
| !! | AACAATCTTCCTCACTTTTA+GGG | + | chr6_1:97022402-97022421 | None:intergenic | 30.0% |
| ACAAAAATCAGTGATAGCAT+TGG | - | chr6_1:97022527-97022546 | Msa0900830:CDS | 30.0% | |
| AGTAGAGGAAGATGGAAAAT+GGG | + | chr6_1:97018336-97018355 | None:intergenic | 35.0% | |
| ! | AGAAACTTTTGTGTCAGTAG+AGG | + | chr6_1:97018351-97018370 | None:intergenic | 35.0% |
| AAAGGTTGAGGAGATATTGA+AGG | - | chr6_1:97018493-97018512 | Msa0900830:CDS | 35.0% | |
| ! | CAAAATGGTTTGGAGAATGA+AGG | - | chr6_1:97018587-97018606 | Msa0900830:CDS | 35.0% |
| TCATGAACACTTCAACAACA+AGG | + | chr6_1:97018817-97018836 | None:intergenic | 35.0% | |
| !! | ATCGCCAATGTTTTAAATCG+TGG | - | chr6_1:97019358-97019377 | Msa0900830:intron | 35.0% |
| !!! | GCGAGAGAATTTTGAAATTC+AGG | - | chr6_1:97019411-97019430 | Msa0900830:intron | 35.0% |
| ! | TGTCATTGTCCATTCCTTTT+TGG | - | chr6_1:97019526-97019545 | Msa0900830:CDS | 35.0% |
| ! | GTCATTGTCCATTCCTTTTT+GGG | - | chr6_1:97019527-97019546 | Msa0900830:CDS | 35.0% |
| ! | CTCTTTTATGCATTAGACCT+TGG | - | chr6_1:97019593-97019612 | Msa0900830:intron | 35.0% |
| ! | TTTTATGCATTAGACCTTGG+TGG | - | chr6_1:97019596-97019615 | Msa0900830:intron | 35.0% |
| ! | CTTTCTCTTTTCCACCTAAT+TGG | + | chr6_1:97019646-97019665 | None:intergenic | 35.0% |
| CAATTAGGTGGAAAAGAGAA+AGG | - | chr6_1:97019644-97019663 | Msa0900830:intron | 35.0% | |
| AGGAGGAATTGAAACTTCTT+CGG | + | chr6_1:97019687-97019706 | None:intergenic | 35.0% | |
| AGGTTTCAATATTGAGGATG+TGG | - | chr6_1:97019982-97020001 | Msa0900830:intron | 35.0% | |
| CTCTTCGAAAAGAGTTTATG+TGG | + | chr6_1:97020080-97020099 | None:intergenic | 35.0% | |
| ! | TCTCTTCATTTGTTGCGAAT+AGG | - | chr6_1:97020105-97020124 | Msa0900830:intron | 35.0% |
| ACATACATACCTAGCAGTTA+AGG | - | chr6_1:97020311-97020330 | Msa0900830:intron | 35.0% | |
| TAATCGTATCCTTAACTGCT+AGG | + | chr6_1:97020323-97020342 | None:intergenic | 35.0% | |
| TACTTCATTGTGATTCTGTG+TGG | - | chr6_1:97020481-97020500 | Msa0900830:CDS | 35.0% | |
| GTAAAGGAATTGCGAAAAGA+AGG | + | chr6_1:97020606-97020625 | None:intergenic | 35.0% | |
| CTACATTCCATCATCAAGTT+AGG | + | chr6_1:97020706-97020725 | None:intergenic | 35.0% | |
| AATGCAATTCCAAAATGGCA+CGG | - | chr6_1:97020834-97020853 | Msa0900830:intron | 35.0% | |
| CATACCATCTTTCCTGATTT+CGG | + | chr6_1:97020867-97020886 | None:intergenic | 35.0% | |
| TTACATGCCTCTTAGAATCA+TGG | + | chr6_1:97020939-97020958 | None:intergenic | 35.0% | |
| AGTTGAGTAAATATCCACGT+TGG | - | chr6_1:97020964-97020983 | Msa0900830:intron | 35.0% | |
| TTGTTTGGATCTGTTAACGA+AGG | - | chr6_1:97021084-97021103 | Msa0900830:CDS | 35.0% | |
| TGTTTGGATCTGTTAACGAA+GGG | - | chr6_1:97021085-97021104 | Msa0900830:CDS | 35.0% | |
| TGTATTTGGGTGACATTGTA+AGG | - | chr6_1:97021461-97021480 | Msa0900830:intron | 35.0% | |
| ! | GCTGAAGAAGCTGAAATTTT+CGG | - | chr6_1:97021502-97021521 | Msa0900830:intron | 35.0% |
| ! | CTGAAGAAGCTGAAATTTTC+GGG | - | chr6_1:97021503-97021522 | Msa0900830:intron | 35.0% |
| ! | TGAAGAAGCTGAAATTTTCG+GGG | - | chr6_1:97021504-97021523 | Msa0900830:intron | 35.0% |
| CAGAATCTTTAGTGTTAGGT+TGG | + | chr6_1:97021587-97021606 | None:intergenic | 35.0% | |
| ATTAGGAGGCAATGAAAATG+AGG | + | chr6_1:97021683-97021702 | None:intergenic | 35.0% | |
| TTCAATGGTAGAACTCATTG+TGG | - | chr6_1:97021722-97021741 | Msa0900830:intron | 35.0% | |
| ! | TAGTGGTTTTTGTCCTACAA+TGG | - | chr6_1:97021761-97021780 | Msa0900830:intron | 35.0% |
| !! | GAACCGGTTCTAAAATCTTA+AGG | + | chr6_1:97021877-97021896 | None:intergenic | 35.0% |
| TATGCATCACGATACATCTT+CGG | - | chr6_1:97022143-97022162 | Msa0900830:intron | 35.0% | |
| GGTGGTTGGAAAAAAATTGA+AGG | - | chr6_1:97022173-97022192 | Msa0900830:intron | 35.0% | |
| TGAAGGATATATTGGAGGTA+CGG | - | chr6_1:97022190-97022209 | Msa0900830:intron | 35.0% | |
| !! | ACAATCTTCCTCACTTTTAG+GGG | + | chr6_1:97022401-97022420 | None:intergenic | 35.0% |
| !! | CAACAATCTTCCTCACTTTT+AGG | + | chr6_1:97022403-97022422 | None:intergenic | 35.0% |
| AAAAGTGAGGAAGATTGTTG+TGG | - | chr6_1:97022403-97022422 | Msa0900830:CDS | 35.0% | |
| !! | TCTGATATTGTTTCTGTTCG+TGG | - | chr6_1:97022429-97022448 | Msa0900830:CDS | 35.0% |
| !! | CTGATATTGTTTCTGTTCGT+GGG | - | chr6_1:97022430-97022449 | Msa0900830:CDS | 35.0% |
| !! | TGATATTGTTTCTGTTCGTG+GGG | - | chr6_1:97022431-97022450 | Msa0900830:CDS | 35.0% |
| ! | TTTTGGCATCCTAAGGAAAT+TGG | - | chr6_1:97022476-97022495 | Msa0900830:CDS | 35.0% |
| TTTGGCATCCTAAGGAAATT+GGG | - | chr6_1:97022477-97022496 | Msa0900830:CDS | 35.0% | |
| TATCTCTTCCCAATTTCCTT+AGG | + | chr6_1:97022488-97022507 | None:intergenic | 35.0% | |
| AAGGAAATTGGGAAGAGATA+CGG | - | chr6_1:97022488-97022507 | Msa0900830:CDS | 35.0% | |
| !!! | CACTGATTTTTGTTTATCCC+CGG | + | chr6_1:97022520-97022539 | None:intergenic | 35.0% |
| ! | AAATCAGTGATAGCATTGGA+TGG | - | chr6_1:97022531-97022550 | Msa0900830:CDS | 35.0% |
| CAGTAGAGGAAGATGGAAAA+TGG | + | chr6_1:97018337-97018356 | None:intergenic | 40.0% | |
| TTTGTGTCAGTAGAGGAAGA+TGG | + | chr6_1:97018344-97018363 | None:intergenic | 40.0% | |
| AATGGCCAAGATAGTAGCTA+CGG | - | chr6_1:97018394-97018413 | Msa0900830:CDS | 40.0% | |
| !! | GAGGAGATATTGAAGGTGTT+TGG | - | chr6_1:97018500-97018519 | Msa0900830:CDS | 40.0% |
| ! | AATGGTTTGGAGAATGAAGG+TGG | - | chr6_1:97018590-97018609 | Msa0900830:CDS | 40.0% |
| AGCAAAGAGAATAACCCAGA+TGG | + | chr6_1:97018656-97018675 | None:intergenic | 40.0% | |
| TCCACCTAATTGGATACGAA+GGG | + | chr6_1:97019636-97019655 | None:intergenic | 40.0% | |
| TTCCACCTAATTGGATACGA+AGG | + | chr6_1:97019637-97019656 | None:intergenic | 40.0% | |
| ! | ATTCCTCCTCATTTGATGAC+CGG | - | chr6_1:97019698-97019717 | Msa0900830:CDS | 40.0% |
| CAGACTTACATGTGAAGAAC+CGG | + | chr6_1:97019720-97019739 | None:intergenic | 40.0% | |
| ACTCCACTTTATTAGAGTCC+CGG | + | chr6_1:97019960-97019979 | None:intergenic | 40.0% | |
| ! | GATTCTGTGTGGTTTTCTGT+AGG | - | chr6_1:97020492-97020511 | Msa0900830:CDS | 40.0% |
| TAGGTCGGAGAAGATATAGT+TGG | - | chr6_1:97020511-97020530 | Msa0900830:intron | 40.0% | |
| ACCAAGTCCTTGGAAAAAGT+TGG | - | chr6_1:97020541-97020560 | Msa0900830:intron | 40.0% | |
| ATGTAGATTAACGACACCGT+TGG | - | chr6_1:97020720-97020739 | Msa0900830:intron | 40.0% | |
| TAAAGCCAGATTCAGCAATC+AGG | - | chr6_1:97020752-97020771 | Msa0900830:intron | 40.0% | |
| TGTACCGAAATCAGGAAAGA+TGG | - | chr6_1:97020860-97020879 | Msa0900830:intron | 40.0% | |
| GTGTTCACCATGATTCTAAG+AGG | - | chr6_1:97020929-97020948 | Msa0900830:intron | 40.0% | |
| !! | TGTGAAGGACTAGGTTGATA+CGG | + | chr6_1:97021007-97021026 | None:intergenic | 40.0% |
| TACAATTTCAGGGACCACTT+TGG | + | chr6_1:97021041-97021060 | None:intergenic | 40.0% | |
| GCTTGATCGTATTCTGTTAG+AGG | + | chr6_1:97021305-97021324 | None:intergenic | 40.0% | |
| !! | ATACGATCAAGCTCTAGATG+CGG | - | chr6_1:97021313-97021332 | Msa0900830:CDS | 40.0% |
| TAACCATTACCTGTTCTCCA+GGG | + | chr6_1:97021349-97021368 | None:intergenic | 40.0% | |
| ATAACCATTACCTGTTCTCC+AGG | + | chr6_1:97021350-97021369 | None:intergenic | 40.0% | |
| !! | AAGGAGAGTACTACTGAAGA+TGG | - | chr6_1:97021480-97021499 | Msa0900830:intron | 40.0% |
| AAAGGAATTCTCAACTTGGG+AGG | + | chr6_1:97021538-97021557 | None:intergenic | 40.0% | |
| GTATAGGACACCTGATATGT+CGG | - | chr6_1:97022119-97022138 | Msa0900830:intron | 40.0% | |
| CGATACATCTTCGGATCTAA+AGG | - | chr6_1:97022152-97022171 | Msa0900830:intron | 40.0% | |
| TACATCTTCGGATCTAAAGG+TGG | - | chr6_1:97022155-97022174 | Msa0900830:intron | 40.0% | |
| TTTCTCCTATCCAAAGGAAG+TGG | - | chr6_1:97022328-97022347 | Msa0900830:intron | 40.0% | |
| GAAAACCAAACCACTTCCTT+TGG | + | chr6_1:97022341-97022360 | None:intergenic | 40.0% | |
| ATAACACACCCCTAAAAGTG+AGG | - | chr6_1:97022390-97022409 | Msa0900830:CDS | 40.0% | |
| !!! | CTGCTATTTTTGGCATCCTA+AGG | - | chr6_1:97022469-97022488 | Msa0900830:CDS | 40.0% |
| ATTGGGAAGAGATACGGTAA+AGG | - | chr6_1:97022494-97022513 | Msa0900830:CDS | 40.0% | |
| ! | ATGCATGGAGAGTACACTAA+GGG | - | chr6_1:97022587-97022606 | Msa0900830:CDS | 40.0% |
| AGTACACTAAGGGAGTTGTT+GGG | - | chr6_1:97022597-97022616 | Msa0900830:CDS | 40.0% | |
| AGCTTCTCAGTCCCAATATT+TGG | - | chr6_1:97022692-97022711 | Msa0900830:five_prime_UTR | 40.0% | |
| GCTTCTCAGTCCCAATATTT+GGG | - | chr6_1:97022693-97022712 | Msa0900830:five_prime_UTR | 40.0% | |
| CTCTTCCACTCCCAAATATT+GGG | + | chr6_1:97022706-97022725 | None:intergenic | 40.0% | |
| ACTCTTCCACTCCCAAATAT+TGG | + | chr6_1:97022707-97022726 | None:intergenic | 40.0% | |
| GAGGAAGATGGAAAATGGGT+TGG | + | chr6_1:97018332-97018351 | None:intergenic | 45.0% | |
| ! | TAAAGAGGGGTGTGGAAAGT+GGG | - | chr6_1:97018469-97018488 | Msa0900830:CDS | 45.0% |
| TGGAAAGTGGGAAAAGGTTG+AGG | - | chr6_1:97018481-97018500 | Msa0900830:CDS | 45.0% | |
| !! | GAAGAGTGTTGCTGAAGCTA+TGG | - | chr6_1:97018553-97018572 | Msa0900830:CDS | 45.0% |
| CTAATTGGATACGAAGGGCA+CGG | + | chr6_1:97019631-97019650 | None:intergenic | 45.0% | |
| GAAGAACCGGTCATCAAATG+AGG | + | chr6_1:97019707-97019726 | None:intergenic | 45.0% | |
| TCCTCTCCCTGGAAGAAAAA+GGG | - | chr6_1:97019886-97019905 | Msa0900830:intron | 45.0% | |
| ! | CCAACTCCCTTTTTCTTCCA+GGG | + | chr6_1:97019895-97019914 | None:intergenic | 45.0% |
| CCTGGAAGAAAAAGGGAGTT+GGG | - | chr6_1:97019893-97019912 | Msa0900830:intron | 45.0% | |
| GGGTTTCACGTTCTCATTTC+CGG | - | chr6_1:97019913-97019932 | Msa0900830:intron | 45.0% | |
| ! | AGGCAAACATCGATTGCATC+CGG | - | chr6_1:97019938-97019957 | Msa0900830:intron | 45.0% |
| CATCCGGGACTCTAATAAAG+TGG | - | chr6_1:97019954-97019973 | Msa0900830:intron | 45.0% | |
| ! | CTGTGTGGTTTTCTGTAGGT+CGG | - | chr6_1:97020496-97020515 | Msa0900830:CDS | 45.0% |
| TGGTGAACTAACCAAGTCCT+TGG | - | chr6_1:97020531-97020550 | Msa0900830:intron | 45.0% | |
| !! | GCCAACTTTTTCCAAGGACT+TGG | + | chr6_1:97020545-97020564 | None:intergenic | 45.0% |
| !! | TTGCAGGCCAACTTTTTCCA+AGG | + | chr6_1:97020551-97020570 | None:intergenic | 45.0% |
| ! | GGCTTTAGCTACTGTTCCAA+CGG | + | chr6_1:97020739-97020758 | None:intergenic | 45.0% |
| GACATCCTGATTGCTGAATC+TGG | + | chr6_1:97020760-97020779 | None:intergenic | 45.0% | |
| TCCGGTACCAAGAATTACAC+CGG | + | chr6_1:97020787-97020806 | None:intergenic | 45.0% | |
| TTAGAGGAAGATGCGAGGAA+CGG | + | chr6_1:97021289-97021308 | None:intergenic | 45.0% | |
| TTCTGTTAGAGGAAGATGCG+AGG | + | chr6_1:97021294-97021313 | None:intergenic | 45.0% | |
| AAACCCTGGAGAACAGGTAA+TGG | - | chr6_1:97021343-97021362 | Msa0900830:CDS | 45.0% | |
| !! | AAGGGATCAGTTTCTGAGAC+TGG | + | chr6_1:97021858-97021877 | None:intergenic | 45.0% |
| TGATGCATAGCCGACATATC+AGG | + | chr6_1:97022132-97022151 | None:intergenic | 45.0% | |
| TCTTCGGATCTAAAGGTGGT+TGG | - | chr6_1:97022159-97022178 | Msa0900830:intron | 45.0% | |
| CCAAACCACTTCCTTTGGAT+AGG | + | chr6_1:97022336-97022355 | None:intergenic | 45.0% | |
| CCTATCCAAAGGAAGTGGTT+TGG | - | chr6_1:97022333-97022352 | Msa0900830:intron | 45.0% | |
| ! | TCAGTGATAGCATTGGATGG+AGG | - | chr6_1:97022534-97022553 | Msa0900830:CDS | 45.0% |
| CGCGAAATTCAGAACATGCA+TGG | - | chr6_1:97022572-97022591 | Msa0900830:CDS | 45.0% | |
| ! | CATGCATGGAGAGTACACTA+AGG | - | chr6_1:97022586-97022605 | Msa0900830:CDS | 45.0% |
| GAGTACACTAAGGGAGTTGT+TGG | - | chr6_1:97022596-97022615 | Msa0900830:CDS | 45.0% | |
| ! | TTGTTGGGAGATGAAGCATC+CGG | - | chr6_1:97022612-97022631 | Msa0900830:CDS | 45.0% |
| ATGTTCGATTCCGATTGTCC+CGG | + | chr6_1:97022634-97022653 | None:intergenic | 45.0% | |
| GGAATCGAACATTCCAACGA+CGG | - | chr6_1:97022642-97022661 | Msa0900830:five_prime_UTR | 45.0% | |
| TCAGTCCCAATATTTGGGAG+TGG | - | chr6_1:97022698-97022717 | Msa0900830:five_prime_UTR | 45.0% | |
| !!! | TTTTTTTTTTTTTTAAAATG+TGG | - | chr6_1:97020384-97020403 | Msa0900830:intron | 5.0% |
| CAAGATAGTAGCTACGGTGG+CGG | - | chr6_1:97018400-97018419 | Msa0900830:CDS | 50.0% | |
| AGGGCAGCAAAGGAGTAAAG+AGG | - | chr6_1:97018454-97018473 | Msa0900830:CDS | 50.0% | |
| GGGCAGCAAAGGAGTAAAGA+GGG | - | chr6_1:97018455-97018474 | Msa0900830:CDS | 50.0% | |
| GGCAGCAAAGGAGTAAAGAG+GGG | - | chr6_1:97018456-97018475 | Msa0900830:CDS | 50.0% | |
| CAAAGGAGTAAAGAGGGGTG+TGG | - | chr6_1:97018461-97018480 | Msa0900830:CDS | 50.0% | |
| ! | GTAAAGAGGGGTGTGGAAAG+TGG | - | chr6_1:97018468-97018487 | Msa0900830:CDS | 50.0% |
| TTCTCTCGCAACGGCATATC+AGG | + | chr6_1:97019400-97019419 | None:intergenic | 50.0% | |
| CGTGCCCTTCGTATCCAATT+AGG | - | chr6_1:97019629-97019648 | Msa0900830:intron | 50.0% | |
| GCCCTTCGTATCCAATTAGG+TGG | - | chr6_1:97019632-97019651 | Msa0900830:intron | 50.0% | |
| GAACCGGTCATCAAATGAGG+AGG | + | chr6_1:97019704-97019723 | None:intergenic | 50.0% | |
| GTCCTCTCCCTGGAAGAAAA+AGG | - | chr6_1:97019885-97019904 | Msa0900830:intron | 50.0% | |
| ! | TCCCTTTTTCTTCCAGGGAG+AGG | + | chr6_1:97019890-97019909 | None:intergenic | 50.0% |
| CCCTGGAAGAAAAAGGGAGT+TGG | - | chr6_1:97019892-97019911 | Msa0900830:intron | 50.0% | |
| ! | CCCAACTCCCTTTTTCTTCC+AGG | + | chr6_1:97019896-97019915 | None:intergenic | 50.0% |
| TCACGTTCTCATTTCCGGTG+AGG | - | chr6_1:97019918-97019937 | Msa0900830:intron | 50.0% | |
| GCAATCGATGTTTGCCTCAC+CGG | + | chr6_1:97019935-97019954 | None:intergenic | 50.0% | |
| ! | GGCAAACATCGATTGCATCC+GGG | - | chr6_1:97019939-97019958 | Msa0900830:intron | 50.0% |
| AGCAATCAGGATGTCATCGC+CGG | - | chr6_1:97020765-97020784 | Msa0900830:intron | 50.0% | |
| GTCATCGCCGGTGTAATTCT+TGG | - | chr6_1:97020777-97020796 | Msa0900830:intron | 50.0% | |
| GCCGGTGTAATTCTTGGTAC+CGG | - | chr6_1:97020783-97020802 | Msa0900830:intron | 50.0% | |
| !!! | GGTACAACACCGTGCCATTT+TGG | + | chr6_1:97020846-97020865 | None:intergenic | 50.0% |
| !! | CACGGTGTTGTACCGAAATC+AGG | - | chr6_1:97020852-97020871 | Msa0900830:intron | 50.0% |
| CTGTTCTCCAGGGTTTAAGC+TGG | + | chr6_1:97021339-97021358 | None:intergenic | 50.0% | |
| CAGCTTAAACCCTGGAGAAC+AGG | - | chr6_1:97021337-97021356 | Msa0900830:CDS | 50.0% | |
| TGTGACTTCCGTGTCTACGA+AGG | - | chr6_1:97021917-97021936 | Msa0900830:intron | 50.0% | |
| GTGACTTCCGTGTCTACGAA+GGG | - | chr6_1:97021918-97021937 | Msa0900830:intron | 50.0% | |
| TTGGAGACCCTTCGTAGACA+CGG | + | chr6_1:97021928-97021947 | None:intergenic | 50.0% | |
| TGTCTACGAAGGGTCTCCAA+TGG | - | chr6_1:97021928-97021947 | Msa0900830:intron | 50.0% | |
| CGGCTGCTTCTTTGAACATG+TGG | - | chr6_1:97022210-97022229 | Msa0900830:intron | 50.0% | |
| CAAAAATAGCAGCAGCAGCG+AGG | + | chr6_1:97022461-97022480 | None:intergenic | 50.0% | |
| !!! | CTCGCTGCTGCTGCTATTTT+TGG | - | chr6_1:97022459-97022478 | Msa0900830:CDS | 50.0% |
| GGAAGAGATACGGTAAAGGC+CGG | - | chr6_1:97022498-97022517 | Msa0900830:CDS | 50.0% | |
| GAAGAGATACGGTAAAGGCC+GGG | - | chr6_1:97022499-97022518 | Msa0900830:CDS | 50.0% | |
| AAGAGATACGGTAAAGGCCG+GGG | - | chr6_1:97022500-97022519 | Msa0900830:CDS | 50.0% | |
| ! | TGTTGGGAGATGAAGCATCC+GGG | - | chr6_1:97022613-97022632 | Msa0900830:CDS | 50.0% |
| ! | GATGAAGCATCCGGGACAAT+CGG | - | chr6_1:97022621-97022640 | Msa0900830:exon | 50.0% |
| ATTGGGACTGAGAAGCTGCA+AGG | + | chr6_1:97022689-97022708 | None:intergenic | 50.0% | |
| GGCCAAGATAGTAGCTACGG+TGG | - | chr6_1:97018397-97018416 | Msa0900830:CDS | 55.0% | |
| CGCCACCGTAGCTACTATCT+TGG | + | chr6_1:97018402-97018421 | None:intergenic | 55.0% | |
| GGGGTGTGGAAAGTGGGAAA+AGG | - | chr6_1:97018475-97018494 | Msa0900830:CDS | 55.0% | |
| CACGGAAGTTTGTGCCACCA+AGG | + | chr6_1:97019613-97019632 | None:intergenic | 55.0% | |
| GGGAGAGGACGAAACTCTTC+AGG | + | chr6_1:97019875-97019894 | None:intergenic | 55.0% | |
| GAAGAGTTTCGTCCTCTCCC+TGG | - | chr6_1:97019875-97019894 | Msa0900830:intron | 55.0% | |
| AAATAGCAGCAGCAGCGAGG+CGG | + | chr6_1:97022458-97022477 | None:intergenic | 55.0% | |
| GAACATTCCAACGACGGCTC+TGG | - | chr6_1:97022648-97022667 | Msa0900830:five_prime_UTR | 55.0% | |
| !! | TCCAACGACGGCTCTGGAAT+TGG | - | chr6_1:97022654-97022673 | Msa0900830:five_prime_UTR | 55.0% |
| TCCAATTCCAGAGCCGTCGT+TGG | + | chr6_1:97022658-97022677 | None:intergenic | 55.0% | |
| GGACTGAGAAGCTGCAAGGA+GGG | + | chr6_1:97022685-97022704 | None:intergenic | 55.0% | |
| ! | GATAGTAGCTACGGTGGCGG+TGG | - | chr6_1:97018403-97018422 | Msa0900830:CDS | 60.0% |
| GAGCTGTCACGCGCATTTGC+AGG | + | chr6_1:97020567-97020586 | None:intergenic | 60.0% | |
| GATGCGGCCAGCTTAAACCC+TGG | - | chr6_1:97021329-97021348 | Msa0900830:CDS | 60.0% | |
| AATAGCAGCAGCAGCGAGGC+GGG | + | chr6_1:97022457-97022476 | None:intergenic | 60.0% | |
| GGGACTGAGAAGCTGCAAGG+AGG | + | chr6_1:97022686-97022705 | None:intergenic | 60.0% | |
| ! | AGTAGCTACGGTGGCGGTGG+TGG | - | chr6_1:97018406-97018425 | Msa0900830:CDS | 65.0% |
| ! | CGGTGGTGGTAGGGCAGCAA+AGG | - | chr6_1:97018444-97018463 | Msa0900830:CDS | 65.0% |
| ! | AGCTACGGTGGCGGTGGTGG+CGG | - | chr6_1:97018409-97018428 | Msa0900830:CDS | 70.0% |
| ! | CTGCGGCGGCGGTGGTGGTA+GGG | - | chr6_1:97018435-97018454 | Msa0900830:CDS | 75.0% |
| !!! | GGCGGTGGTGGCGGCTGCTG+CGG | - | chr6_1:97018418-97018437 | Msa0900830:CDS | 80.0% |
| !!! | GGTGGTGGCGGCTGCTGCGG+CGG | - | chr6_1:97018421-97018440 | Msa0900830:CDS | 80.0% |
| !! | GCTGCGGCGGCGGTGGTGGT+AGG | - | chr6_1:97018434-97018453 | Msa0900830:CDS | 80.0% |
| !! | GGTGGCGGCTGCTGCGGCGG+CGG | - | chr6_1:97018424-97018443 | Msa0900830:CDS | 85.0% |
| ! | GGCTGCTGCGGCGGCGGTGG+TGG | - | chr6_1:97018430-97018449 | Msa0900830:CDS | 85.0% |
| ! | GGCGGCTGCTGCGGCGGCGG+TGG | - | chr6_1:97018427-97018446 | Msa0900830:CDS | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 97018300 | 97022731 | 97018300 | ID=Msa0900830;Name=Msa0900830 |
| chr6_1 | mRNA | 97018300 | 97022731 | 97018300 | ID=Msa0900830-mRNA-1;Parent=Msa0900830;Name=Msa0900830-mRNA-1;_AED=0.20;_eAED=0.20;_QI=95|0.85|0.87|1|1|1|8|0|458 |
| chr6_1 | exon | 97018300 | 97018615 | 97018300 | ID=Msa0900830-mRNA-1:exon:16920;Parent=Msa0900830-mRNA-1 |
| chr6_1 | exon | 97019465 | 97019595 | 97019465 | ID=Msa0900830-mRNA-1:exon:16919;Parent=Msa0900830-mRNA-1 |
| chr6_1 | exon | 97019673 | 97019771 | 97019673 | ID=Msa0900830-mRNA-1:exon:16918;Parent=Msa0900830-mRNA-1 |
| chr6_1 | exon | 97020150 | 97020305 | 97020150 | ID=Msa0900830-mRNA-1:exon:16917;Parent=Msa0900830-mRNA-1 |
| chr6_1 | exon | 97020443 | 97020517 | 97020443 | ID=Msa0900830-mRNA-1:exon:16916;Parent=Msa0900830-mRNA-1 |
| chr6_1 | exon | 97021028 | 97021210 | 97021028 | ID=Msa0900830-mRNA-1:exon:16915;Parent=Msa0900830-mRNA-1 |
| chr6_1 | exon | 97021301 | 97021451 | 97021301 | ID=Msa0900830-mRNA-1:exon:16914;Parent=Msa0900830-mRNA-1 |
| chr6_1 | exon | 97022371 | 97022731 | 97022371 | ID=Msa0900830-mRNA-1:exon:16913;Parent=Msa0900830-mRNA-1 |
| chr6_1 | five_prime_UTR | 97022637 | 97022731 | 97022637 | ID=Msa0900830-mRNA-1:five_prime_utr;Parent=Msa0900830-mRNA-1 |
| chr6_1 | CDS | 97022371 | 97022636 | 97022371 | ID=Msa0900830-mRNA-1:cds;Parent=Msa0900830-mRNA-1 |
| chr6_1 | CDS | 97021301 | 97021451 | 97021301 | ID=Msa0900830-mRNA-1:cds;Parent=Msa0900830-mRNA-1 |
| chr6_1 | CDS | 97021028 | 97021210 | 97021028 | ID=Msa0900830-mRNA-1:cds;Parent=Msa0900830-mRNA-1 |
| chr6_1 | CDS | 97020443 | 97020517 | 97020443 | ID=Msa0900830-mRNA-1:cds;Parent=Msa0900830-mRNA-1 |
| chr6_1 | CDS | 97020150 | 97020305 | 97020150 | ID=Msa0900830-mRNA-1:cds;Parent=Msa0900830-mRNA-1 |
| chr6_1 | CDS | 97019673 | 97019771 | 97019673 | ID=Msa0900830-mRNA-1:cds;Parent=Msa0900830-mRNA-1 |
| chr6_1 | CDS | 97019465 | 97019595 | 97019465 | ID=Msa0900830-mRNA-1:cds;Parent=Msa0900830-mRNA-1 |
| chr6_1 | CDS | 97018300 | 97018615 | 97018300 | ID=Msa0900830-mRNA-1:cds;Parent=Msa0900830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
