Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1449160 | sp|O65731|RS5_CICAR | 93.333 | 195 | 13 | 0 | 13 | 207 | 3 | 197 | 2.98e-133 | 374 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1449160 | I3SKT5 | 98.068 | 207 | 3 | 1 | 1 | 207 | 1 | 206 | 6.84e-147 | 416 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa1449160 | 0.814971 | 1.174122e-51 | -8.615850e-47 |
| Msa0003330 | Msa1449160 | 0.804636 | 1.964645e-49 | -8.615850e-47 |
| Msa0003360 | Msa1449160 | 0.804071 | 2.575348e-49 | -8.615850e-47 |
| Msa0021290 | Msa1449160 | 0.847581 | 1.056665e-59 | -8.615850e-47 |
| Msa0021320 | Msa1449160 | 0.830454 | 2.909682e-55 | -8.615850e-47 |
| Msa0027590 | Msa1449160 | 0.868336 | 7.041304e-66 | -8.615850e-47 |
| Msa0040220 | Msa1449160 | 0.864611 | 1.073634e-64 | -8.615850e-47 |
| Msa0072570 | Msa1449160 | 0.810119 | 1.350377e-50 | -8.615850e-47 |
| Msa0075350 | Msa1449160 | 0.833126 | 6.379333e-56 | -8.615850e-47 |
| Msa0087910 | Msa1449160 | 0.832122 | 1.131861e-55 | -8.615850e-47 |
| Msa0094210 | Msa1449160 | 0.954992 | 8.427788e-113 | -8.615850e-47 |
| Msa1351020 | Msa1449160 | 0.844254 | 8.470153e-59 | -8.615850e-47 |
| Msa1363910 | Msa1449160 | 0.969221 | 8.333533e-130 | -8.615850e-47 |
| Msa1368920 | Msa1449160 | 0.829107 | 6.194108e-55 | -8.615850e-47 |
| Msa1390760 | Msa1449160 | 0.837201 | 5.976000e-57 | -8.615850e-47 |
| Msa1424570 | Msa1449160 | 0.811083 | 8.360586e-51 | -8.615850e-47 |
| Msa1432310 | Msa1449160 | 0.821527 | 3.850115e-53 | -8.615850e-47 |
| Msa1449160 | Msa1450560 | 0.820114 | 8.136881e-53 | -8.615850e-47 |
| Msa0602900 | Msa1449160 | 0.813763 | 2.171174e-51 | -8.615850e-47 |
| Msa0605890 | Msa1449160 | 0.815791 | 7.715450e-52 | -8.615850e-47 |
| Msa0619230 | Msa1449160 | 0.840363 | 9.099142e-58 | -8.615850e-47 |
| Msa0622230 | Msa1449160 | 0.846442 | 2.166553e-59 | -8.615850e-47 |
| Msa0643960 | Msa1449160 | 0.816443 | 5.515851e-52 | -8.615850e-47 |
| Msa0653060 | Msa1449160 | 0.823396 | 1.416439e-53 | -8.615850e-47 |
| Msa0704860 | Msa1449160 | 0.823046 | 1.709781e-53 | -8.615850e-47 |
| Msa0708630 | Msa1449160 | 0.837336 | 5.519797e-57 | -8.615850e-47 |
| Msa0738420 | Msa1449160 | 0.802229 | 6.195317e-49 | -8.615850e-47 |
| Msa0748350 | Msa1449160 | 0.842193 | 3.003501e-58 | -8.615850e-47 |
| Msa0767280 | Msa1449160 | 0.800214 | 1.601066e-48 | -8.615850e-47 |
| Msa0788380 | Msa1449160 | 0.836899 | 7.139228e-57 | -8.615850e-47 |
| Msa0790450 | Msa1449160 | 0.813685 | 2.258854e-51 | -8.615850e-47 |
| Msa0822580 | Msa1449160 | 0.836054 | 1.171569e-56 | -8.615850e-47 |
| Msa0838070 | Msa1449160 | 0.811945 | 5.429706e-51 | -8.615850e-47 |
| Msa0132460 | Msa1449160 | 0.836080 | 1.153596e-56 | -8.615850e-47 |
| Msa0134580 | Msa1449160 | 0.869845 | 2.281017e-66 | -8.615850e-47 |
| Msa0167860 | Msa1449160 | 0.805468 | 1.315648e-49 | -8.615850e-47 |
| Msa0182050 | Msa1449160 | 0.840089 | 1.072433e-57 | -8.615850e-47 |
| Msa0182100 | Msa1449160 | 0.800025 | 1.749140e-48 | -8.615850e-47 |
| Msa0188740 | Msa1449160 | 0.801459 | 8.914316e-49 | -8.615850e-47 |
| Msa0191450 | Msa1449160 | 0.852383 | 4.786428e-61 | -8.615850e-47 |
| Msa0191550 | Msa1449160 | 0.844230 | 8.596419e-59 | -8.615850e-47 |
| Msa0192050 | Msa1449160 | 0.807738 | 4.365986e-50 | -8.615850e-47 |
| Msa0192300 | Msa1449160 | 0.819467 | 1.143893e-52 | -8.615850e-47 |
| Msa0194940 | Msa1449160 | 0.831567 | 1.551934e-55 | -8.615850e-47 |
| Msa0195030 | Msa1449160 | 0.822292 | 2.561286e-53 | -8.615850e-47 |
| Msa0237180 | Msa1449160 | 0.806967 | 6.360539e-50 | -8.615850e-47 |
| Msa1237040 | Msa1449160 | 0.821463 | 3.984682e-53 | -8.615850e-47 |
| Msa1240270 | Msa1449160 | 0.829815 | 4.168612e-55 | -8.615850e-47 |
| Msa1245270 | Msa1449160 | 0.805267 | 1.450006e-49 | -8.615850e-47 |
| Msa1317390 | Msa1449160 | 0.802391 | 5.736022e-49 | -8.615850e-47 |
| Msa1334560 | Msa1449160 | 0.820403 | 6.988129e-53 | -8.615850e-47 |
| Msa0371490 | Msa1449160 | 0.838502 | 2.767825e-57 | -8.615850e-47 |
| Msa0377520 | Msa1449160 | 0.800314 | 1.527229e-48 | -8.615850e-47 |
| Msa0388520 | Msa1449160 | 0.834354 | 3.146870e-56 | -8.615850e-47 |
| Msa0426090 | Msa1449160 | 0.864767 | 9.593264e-65 | -8.615850e-47 |
| Msa0426250 | Msa1449160 | 0.840193 | 1.007899e-57 | -8.615850e-47 |
| Msa0430130 | Msa1449160 | 0.820796 | 5.676964e-53 | -8.615850e-47 |
| Msa0472480 | Msa1449160 | 0.871174 | 8.354922e-67 | -8.615850e-47 |
| Msa0475810 | Msa1449160 | 0.857441 | 1.629094e-62 | -8.615850e-47 |
| Msa0481520 | Msa1449160 | 0.849198 | 3.772366e-60 | -8.615850e-47 |
| Msa1001620 | Msa1449160 | 0.818781 | 1.638810e-52 | -8.615850e-47 |
| Msa1025200 | Msa1449160 | 0.823914 | 1.071474e-53 | -8.615850e-47 |
| Msa1025220 | Msa1449160 | 0.817485 | 3.218854e-52 | -8.615850e-47 |
| Msa1037290 | Msa1449160 | 0.826415 | 2.746699e-54 | -8.615850e-47 |
| Msa1040160 | Msa1449160 | 0.806798 | 6.905185e-50 | -8.615850e-47 |
| Msa1041680 | Msa1449160 | 0.853958 | 1.692996e-61 | -8.615850e-47 |
| Msa1042100 | Msa1449160 | 0.802937 | 4.426857e-49 | -8.615850e-47 |
| Msa1050100 | Msa1449160 | 0.823220 | 1.557583e-53 | -8.615850e-47 |
| Msa1054280 | Msa1449160 | 0.810341 | 1.209641e-50 | -8.615850e-47 |
| Msa1082170 | Msa1449160 | 0.830259 | 3.247563e-55 | -8.615850e-47 |
| Msa1083370 | Msa1449160 | 0.823980 | 1.034324e-53 | -8.615850e-47 |
| Msa0239420 | Msa1449160 | 0.811602 | 6.450636e-51 | -8.615850e-47 |
| Msa0243750 | Msa1449160 | 0.834788 | 2.447268e-56 | -8.615850e-47 |
| Msa0277600 | Msa1449160 | 0.817563 | 3.091136e-52 | -8.615850e-47 |
| Msa0281370 | Msa1449160 | 0.832575 | 8.740131e-56 | -8.615850e-47 |
| Msa0282290 | Msa1449160 | 0.833239 | 5.977935e-56 | -8.615850e-47 |
| Msa0301250 | Msa1449160 | 0.818082 | 2.360360e-52 | -8.615850e-47 |
| Msa0313060 | Msa1449160 | 0.826754 | 2.280368e-54 | -8.615850e-47 |
| Msa0315430 | Msa1449160 | 0.812010 | 5.257518e-51 | -8.615850e-47 |
| Msa0315660 | Msa1449160 | 0.812854 | 3.438875e-51 | -8.615850e-47 |
| Msa0340560 | Msa1449160 | 0.821654 | 3.598854e-53 | -8.615850e-47 |
| Msa1144610 | Msa1449160 | 0.879708 | 9.993667e-70 | -8.615850e-47 |
| Msa1164150 | Msa1449160 | 0.847577 | 1.059196e-59 | -8.615850e-47 |
| Msa1165640 | Msa1449160 | 0.846780 | 1.752219e-59 | -8.615850e-47 |
| Msa1166570 | Msa1449160 | 0.854319 | 1.332670e-61 | -8.615850e-47 |
| Msa1166670 | Msa1449160 | 0.940454 | 2.269774e-100 | -8.615850e-47 |
| Msa1167360 | Msa1449160 | 0.802018 | 6.844225e-49 | -8.615850e-47 |
| Msa1186030 | Msa1449160 | 0.843791 | 1.127629e-58 | -8.615850e-47 |
| Msa1206240 | Msa1449160 | 0.836655 | 8.240851e-57 | -8.615850e-47 |
| Msa1218170 | Msa1449160 | 0.809706 | 1.657166e-50 | -8.615850e-47 |
| Msa1220580 | Msa1449160 | 0.818842 | 1.586979e-52 | -8.615850e-47 |
| Msa0517480 | Msa1449160 | 0.823157 | 1.610960e-53 | -8.615850e-47 |
| Msa0529900 | Msa1449160 | 0.816550 | 5.219642e-52 | -8.615850e-47 |
| Msa0547920 | Msa1449160 | 0.826953 | 2.043905e-54 | -8.615850e-47 |
| Msa0550100 | Msa1449160 | 0.811779 | 5.901674e-51 | -8.615850e-47 |
| Msa0573550 | Msa1449160 | 0.875950 | 2.056746e-68 | -8.615850e-47 |
| Msa0582070 | Msa1449160 | 0.997800 | 1.816436e-249 | -8.615850e-47 |
| Msa0597240 | Msa1449160 | 0.827876 | 1.227704e-54 | -8.615850e-47 |
| Msa0846900 | Msa1449160 | 0.807051 | 6.104359e-50 | -8.615850e-47 |
| Msa0861320 | Msa1449160 | 0.808007 | 3.826196e-50 | -8.615850e-47 |
| Msa0929700 | Msa1449160 | 0.866121 | 3.593742e-65 | -8.615850e-47 |
| Msa0930790 | Msa1449160 | 0.817136 | 3.856765e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1449160 | MtrunA17_Chr7g0268431 | 98.068 | 207 | 3 | 1 | 1 | 207 | 1 | 206 | 1.32e-150 | 416 |
| Msa1449160 | MtrunA17_Chr1g0176261 | 94.737 | 209 | 7 | 3 | 1 | 207 | 33 | 239 | 7.11e-141 | 392 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1449160 | AT2G37270.1 | 88.557 | 201 | 22 | 1 | 8 | 207 | 7 | 207 | 6.29e-132 | 369 |
| Msa1449160 | AT2G37270.2 | 88.557 | 201 | 22 | 1 | 8 | 207 | 7 | 207 | 6.29e-132 | 369 |
| Msa1449160 | AT3G11940.1 | 89.529 | 191 | 20 | 0 | 17 | 207 | 17 | 207 | 2.40e-130 | 365 |
| Msa1449160 | AT3G11940.2 | 89.529 | 191 | 20 | 0 | 17 | 207 | 17 | 207 | 2.40e-130 | 365 |
Find 73 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAATATAAATACAAATCT+AGG | 0.236520 | tig0032451:-12548 | None:intergenic |
| CAGCTATGCGATCAAGAAAA+AGG | 0.316264 | tig0032451:-8883 | Msa1449160:CDS |
| GCATCAACTATAACTTGAAT+TGG | 0.326315 | tig0032451:+11596 | None:intergenic |
| GAGCTTGACTTCGTTTAGAT+TGG | 0.348914 | tig0032451:+12314 | None:intergenic |
| TCCTCTTCGTCGTGTTAATC+AGG | 0.349057 | tig0032451:-9119 | Msa1449160:CDS |
| ACCAGTTGTTAGAAGATATA+TGG | 0.352278 | tig0032451:+9096 | None:intergenic |
| AGAGAAGATGCAACCAGAAT+TGG | 0.353281 | tig0032451:-9181 | Msa1449160:CDS |
| AACACGTCAGCTTGGAAAAC+TGG | 0.359904 | tig0032451:+8570 | None:intergenic |
| GTGCCCGTGAAGCTGCATTT+AGG | 0.361118 | tig0032451:-9075 | Msa1449160:CDS |
| TTGGATCTGCTGGAGTTGTT+AGG | 0.369348 | tig0032451:-9162 | Msa1449160:CDS |
| AGGAACATATGTTGCATGTT+TGG | 0.372138 | tig0032451:+11790 | None:intergenic |
| GCCAATCGTTAAGCATCATT+TGG | 0.372423 | tig0032451:-8837 | Msa1449160:exon |
| GAGGAAAATAAACCAGTAAA+AGG | 0.394902 | tig0032451:+8728 | None:intergenic |
| ATGGAGCTTTGACGACGTTC+AGG | 0.402177 | tig0032451:-12283 | Msa1449160:intron |
| GCCATATATCTTCTAACAAC+TGG | 0.404354 | tig0032451:-9097 | Msa1449160:CDS |
| CGCGGCCGTCAGCTTCTCAC+TGG | 0.409187 | tig0032451:+12485 | None:intergenic |
| GGTACTCAAAGAAGCGCTTC+AGG | 0.411900 | tig0032451:-11754 | Msa1449160:CDS |
| AGCTTGACTTCGTTTAGATT+GGG | 0.412691 | tig0032451:+12315 | None:intergenic |
| CTTAGTCCATGACTGTTTCA+AGG | 0.413064 | tig0032451:-8669 | Msa1449160:three_prime_UTR |
| GAAAGAAACTCATGGCTGTT+AGG | 0.417495 | tig0032451:-11667 | Msa1449160:CDS |
| CAGATTACCGATCTGTCTCT+TGG | 0.434208 | tig0032451:-11836 | Msa1449160:CDS |
| AGATTACCGATCTGTCTCTT+GGG | 0.440013 | tig0032451:-11835 | Msa1449160:CDS |
| GCAACCAGAATTGGATCTGC+TGG | 0.442717 | tig0032451:-9172 | Msa1449160:CDS |
| GAAGGCAAAGCAAGAGTGAC+AGG | 0.449142 | tig0032451:+12519 | None:intergenic |
| TAGTTGATGCTGTCGTCAAC+AGG | 0.451278 | tig0032451:-11583 | Msa1449160:intron |
| TGCTGGAGTTGTTAGGAGGC+AGG | 0.469034 | tig0032451:-9155 | Msa1449160:CDS |
| TGATGCTTAACGATTGGCCT+TGG | 0.471931 | tig0032451:+8842 | None:intergenic |
| AGATTGGGATCAACTTCGAC+TGG | 0.475242 | tig0032451:+12330 | None:intergenic |
| CTGCCAAGGGTTCATCCAAC+AGG | 0.475684 | tig0032451:-9006 | Msa1449160:intron |
| ATTCTGGTTGCATCTTCTCT+AGG | 0.476377 | tig0032451:+9184 | None:intergenic |
| TCAATATAAATACAAATCTA+GGG | 0.483881 | tig0032451:-12547 | None:intergenic |
| TGTTCCTAAATGCAGCTTCA+CGG | 0.488373 | tig0032451:+9071 | None:intergenic |
| CTGTCTCTTGGGGATTACAT+TGG | 0.493111 | tig0032451:-11824 | Msa1449160:CDS |
| AACTCCAGCAGATCCAATTC+TGG | 0.495047 | tig0032451:+9168 | None:intergenic |
| TCCAAATGATGCTTAACGAT+TGG | 0.503018 | tig0032451:+8836 | None:intergenic |
| TAAGACAATTGCTGAATGCT+TGG | 0.507627 | tig0032451:-9047 | Msa1449160:CDS |
| TCAGCTTGGAAAACTGGTAT+TGG | 0.512119 | tig0032451:+8576 | None:intergenic |
| GTTCCTAAATGCAGCTTCAC+GGG | 0.512374 | tig0032451:+9072 | None:intergenic |
| AGTTGTTAGGAGGCAGGCTG+TGG | 0.516790 | tig0032451:-9149 | Msa1449160:CDS |
| ACATATGTTCCTCACACTGC+TGG | 0.521105 | tig0032451:-11779 | Msa1449160:CDS |
| GGGGATTACATTGGAGCAAG+AGG | 0.537561 | tig0032451:-11815 | Msa1449160:CDS |
| AATACTTCAACACGTCAGCT+TGG | 0.541551 | tig0032451:+8562 | None:intergenic |
| TTAGTGAGCCTCTCAACAAT+GGG | 0.543323 | tig0032451:+11719 | None:intergenic |
| TGAGATTGAGAGAGTTGCCA+AGG | 0.553654 | tig0032451:-8859 | Msa1449160:CDS |
| GAACGTCGTCAAAGCTCCAT+TGG | 0.555775 | tig0032451:+12286 | None:intergenic |
| ATACCTGTTGGATGAACCCT+TGG | 0.559348 | tig0032451:+9003 | None:intergenic |
| GATCTGCTGGAGTTGTTAGG+AGG | 0.561323 | tig0032451:-9159 | Msa1449160:CDS |
| TGAACTCATTAACGCTGCCA+AGG | 0.562075 | tig0032451:-9020 | Msa1449160:CDS |
| GTTAGTGAGCCTCTCAACAA+TGG | 0.562680 | tig0032451:+11718 | None:intergenic |
| AAGTCAAGCTCTTCAACCAA+TGG | 0.580728 | tig0032451:-12302 | Msa1449160:CDS |
| CGATGGTTGAAATGATATGC+TGG | 0.590544 | tig0032451:-8519 | Msa1449160:three_prime_UTR |
| CTCAGTGTCCCATTGTTGAG+AGG | 0.591866 | tig0032451:-11727 | Msa1449160:CDS |
| AATGATCCTTGAAACAGTCA+TGG | 0.599615 | tig0032451:+8663 | None:intergenic |
| ACAAGTCAATTCAACGTGAG+AGG | 0.604212 | tig0032451:+8709 | None:intergenic |
| TTAAATAAAGATGTAATACA+AGG | 0.605416 | tig0032451:+8778 | None:intergenic |
| GATTGGGATCAACTTCGACT+GGG | 0.607523 | tig0032451:+12331 | None:intergenic |
| GCCGCGCCGCACTATCTACA+AGG | 0.608102 | tig0032451:-12468 | Msa1449160:intron |
| GATTACCGATCTGTCTCTTG+GGG | 0.611070 | tig0032451:-11834 | Msa1449160:CDS |
| GTAATCCCCAAGAGACAGAT+CGG | 0.613626 | tig0032451:+11829 | None:intergenic |
| GAACTCATTAACGCTGCCAA+GGG | 0.615553 | tig0032451:-9019 | Msa1449160:CDS |
| ATGATGCACGGCAGAAACAA+CGG | 0.618587 | tig0032451:-11689 | Msa1449160:CDS |
| TAGGATCATTAAGCATGCCA+TGG | 0.620948 | tig0032451:-11648 | Msa1449160:CDS |
| AGCGACGGTTTCATCAGCCA+TGG | 0.634868 | tig0032451:+12356 | None:intergenic |
| TAGCAAGTGAATGATCTCCA+TGG | 0.641966 | tig0032451:+11631 | None:intergenic |
| AAACAACGGAAAGAAACTCA+TGG | 0.646751 | tig0032451:-11675 | Msa1449160:CDS |
| ATGTTCCTCACACTGCTGGT+AGG | 0.649707 | tig0032451:-11775 | Msa1449160:CDS |
| ACTAACTCTCTCATGATGCA+CGG | 0.651624 | tig0032451:-11701 | Msa1449160:CDS |
| GCCTGATTAACACGACGAAG+AGG | 0.651878 | tig0032451:+9118 | None:intergenic |
| AAGCTACCTTGTAGATAGTG+CGG | 0.671061 | tig0032451:+12462 | None:intergenic |
| AACTTCGACTGGGATAGCGA+CGG | 0.675722 | tig0032451:+12341 | None:intergenic |
| AAGGCAAAGCAAGAGTGACA+GGG | 0.684074 | tig0032451:+12520 | None:intergenic |
| GAGTACCTACCAGCAGTGTG+AGG | 0.691601 | tig0032451:+11770 | None:intergenic |
| ACCTTGTAGATAGTGCGGCG+CGG | 0.782232 | tig0032451:+12467 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAATAAAAAACCATTA+AGG | + | tig0032451:9138-9157 | None:intergenic | 10.0% |
| !! | ATAGTTGAATTATTATTAAT+TGG | - | tig0032451:10164-10183 | Msa1449160:intron | 10.0% |
| !!! | TTTCAATAAATATTTTATCT+TGG | - | tig0032451:10739-10758 | Msa1449160:intron | 10.0% |
| !!! | AATACTTTTTTGAATATTTA+AGG | - | tig0032451:11483-11502 | Msa1449160:intron | 10.0% |
| !!! | ATACTTTTTTGAATATTTAA+GGG | - | tig0032451:11484-11503 | Msa1449160:intron | 10.0% |
| !!! | AATTATATTATTTTATGTAG+TGG | - | tig0032451:11846-11865 | Msa1449160:intron | 10.0% |
| !!! | GCTATTTTCATAATTTATAT+TGG | - | tig0032451:8999-9018 | Msa1449160:intron | 15.0% |
| !!! | ATAAATCAACTTGAATTTTT+TGG | - | tig0032451:9804-9823 | Msa1449160:intron | 15.0% |
| !!! | TGTTTTTAAATTGTTAAAAC+TGG | - | tig0032451:10198-10217 | Msa1449160:intron | 15.0% |
| !!! | GTTTTTAAATTGTTAAAACT+GGG | - | tig0032451:10199-10218 | Msa1449160:intron | 15.0% |
| !! | AATTTATCTGTTTACATATA+GGG | + | tig0032451:10917-10936 | None:intergenic | 15.0% |
| !! | TAATTTATCTGTTTACATAT+AGG | + | tig0032451:10918-10937 | None:intergenic | 15.0% |
| !!! | AAACTTTAAAGATTGAATAA+TGG | + | tig0032451:12081-12100 | None:intergenic | 15.0% |
| !!! | TGATGAGAAATATTTTATTT+TGG | - | tig0032451:12252-12271 | Msa1449160:intron | 15.0% |
| !! | TTAAATAAAGATGTAATACA+AGG | + | tig0032451:12279-12298 | None:intergenic | 15.0% |
| !! | GTCAATATATATCAATCATA+GGG | + | tig0032451:9527-9546 | None:intergenic | 20.0% |
| !! | AGTCAATATATATCAATCAT+AGG | + | tig0032451:9528-9547 | None:intergenic | 20.0% |
| !! | AATAATATGAAACAGATCAA+TGG | + | tig0032451:9605-9624 | None:intergenic | 20.0% |
| !!! | TTGAAATTGAATTTTTGATG+CGG | - | tig0032451:9624-9643 | Msa1449160:intron | 20.0% |
| !!! | ATGATTATTTGTTTTCCTAT+TGG | - | tig0032451:9684-9703 | Msa1449160:intron | 20.0% |
| !!! | ATTTTAATAAAACAAAGTCC+AGG | + | tig0032451:10030-10049 | None:intergenic | 20.0% |
| !! | TCACTTATACATAACAAATA+AGG | + | tig0032451:10331-10350 | None:intergenic | 20.0% |
| !! | GTATAAGTGATCAAATATAT+AGG | - | tig0032451:10341-10360 | Msa1449160:intron | 20.0% |
| !! | TTTATAGCATTATAACTACA+TGG | + | tig0032451:10389-10408 | None:intergenic | 20.0% |
| !!! | ATGCTATAAATATTTTGTGA+TGG | - | tig0032451:10399-10418 | Msa1449160:intron | 20.0% |
| !!! | TGTTTTGTGATCAAATATAT+AGG | - | tig0032451:10424-10443 | Msa1449160:intron | 20.0% |
| !! | TTTATAGCATTATAACTACA+TGG | + | tig0032451:10389-10408 | None:intergenic | 20.0% |
| !!! | ATGCTATAAATATTTTGTGA+TGG | - | tig0032451:10399-10418 | Msa1449160:intron | 20.0% |
| !! | GATTACAATATGACAAAATA+AGG | + | tig0032451:10703-10722 | None:intergenic | 20.0% |
| !! | TGTCATATTGTAATCAAATT+TGG | - | tig0032451:10708-10727 | Msa1449160:intron | 20.0% |
| !! | GTCATATTGTAATCAAATTT+GGG | - | tig0032451:10709-10728 | Msa1449160:intron | 20.0% |
| !! | TCATATTGTAATCAAATTTG+GGG | - | tig0032451:10710-10729 | Msa1449160:intron | 20.0% |
| !! | GATTACAATATGACAAAATA+AGG | + | tig0032451:10703-10722 | None:intergenic | 20.0% |
| !!! | ATAATTGTTTGTTTTTTTCC+TGG | - | tig0032451:11280-11299 | Msa1449160:intron | 20.0% |
| !! | ATGATTTATTATTTCCCTAT+TGG | - | tig0032451:10900-10919 | Msa1449160:intron | 20.0% |
| !! | TATTAACAATTAACTGTGTA+TGG | - | tig0032451:11681-11700 | Msa1449160:CDS | 20.0% |
| !!! | AACATTGTTGTTTTTAAACA+TGG | - | tig0032451:12297-12316 | Msa1449160:CDS | 20.0% |
| !!! | TTTTTACATTTCTGCTATTT+AGG | - | tig0032451:12441-12460 | Msa1449160:intron | 20.0% |
| ! | TAATTCAATGATTAGGGTTA+GGG | + | tig0032451:8669-8688 | None:intergenic | 25.0% |
| ! | ATAATTCAATGATTAGGGTT+AGG | + | tig0032451:8670-8689 | None:intergenic | 25.0% |
| ! | CGTGAATAATTCAATGATTA+GGG | + | tig0032451:8675-8694 | None:intergenic | 25.0% |
| !!! | TATTTTCAAGTAACTCATGT+CGG | - | tig0032451:9079-9098 | Msa1449160:CDS | 25.0% |
| ! | TCAAATAAGCCAATCTAAAT+AGG | - | tig0032451:9111-9130 | Msa1449160:CDS | 25.0% |
| ! | GAAAAAAGTGACAAATGATA+AGG | + | tig0032451:9762-9781 | None:intergenic | 25.0% |
| !!! | TTAAGAATTTTGACAATGCA+TGG | - | tig0032451:9843-9862 | Msa1449160:intron | 25.0% |
| ! | TTGTTTATTCTCACTTTGTT+TGG | - | tig0032451:10120-10139 | Msa1449160:intron | 25.0% |
| ! | GATGATTTATTGTTTCCTAT+TGG | - | tig0032451:10254-10273 | Msa1449160:intron | 25.0% |
| ! | TGATTAATACTTGATAGAGA+AGG | - | tig0032451:10514-10533 | Msa1449160:intron | 25.0% |
| !!! | ACTATTTTAGCTGTTAAGAT+TGG | - | tig0032451:10570-10589 | Msa1449160:intron | 25.0% |
| !!! | CTATTTTAGCTGTTAAGATT+GGG | - | tig0032451:10571-10590 | Msa1449160:intron | 25.0% |
| !!! | TATTTTAGCTGTTAAGATTG+GGG | - | tig0032451:10572-10591 | Msa1449160:intron | 25.0% |
| !!! | GATGATTTTTTGTTTCCTAT+TGG | - | tig0032451:10626-10645 | Msa1449160:intron | 25.0% |
| ! | AGTAATCAATTAATCATGCA+TGG | - | tig0032451:10763-10782 | Msa1449160:intron | 25.0% |
| !! | GTAATTTTTACTTGTACGAA+AGG | - | tig0032451:10808-10827 | Msa1449160:intron | 25.0% |
| ! | TAAATCATCATTTCATTCTC+CGG | + | tig0032451:10243-10262 | None:intergenic | 25.0% |
| !!! | AAGTTTGAAATCTTTTCTTG+TGG | - | tig0032451:11319-11338 | Msa1449160:intron | 25.0% |
| ! | ATTGAAAGGAGAAAATGAAA+TGG | + | tig0032451:11636-11655 | None:intergenic | 25.0% |
| ! | CGAGAAACAAATTGTAAATA+AGG | - | tig0032451:11727-11746 | Msa1449160:CDS | 25.0% |
| ! | TTAATTCAAAGCAAAAACTG+AGG | - | tig0032451:11767-11786 | Msa1449160:CDS | 25.0% |
| ! | ACATATCCTAAAACTAAAAC+TGG | + | tig0032451:11812-11831 | None:intergenic | 25.0% |
| !! | CTTTAAAGATTGAATAATGG+TGG | + | tig0032451:12078-12097 | None:intergenic | 25.0% |
| ! | AGAAAACAAATTCAGTACAT+TGG | + | tig0032451:12104-12123 | None:intergenic | 25.0% |
| GCGTGAATAATTCAATGATT+AGG | + | tig0032451:8676-8695 | None:intergenic | 30.0% | |
| CATTAAGGACCTATTTAGAT+TGG | + | tig0032451:9123-9142 | None:intergenic | 30.0% | |
| CAATCTAAATAGGTCCTTAA+TGG | - | tig0032451:9121-9140 | Msa1449160:CDS | 30.0% | |
| GCATCAACTATAACTTGAAT+TGG | + | tig0032451:9461-9480 | None:intergenic | 30.0% | |
| GGGAAAATAACAAAATGCAA+AGG | + | tig0032451:9507-9526 | None:intergenic | 30.0% | |
| CTGCTTAATATGTCTTGATT+TGG | - | tig0032451:9650-9669 | Msa1449160:intron | 30.0% | |
| !! | ATATGTCTTGATTTGGAGAA+TGG | - | tig0032451:9657-9676 | Msa1449160:intron | 30.0% |
| ATTCAGGTATTCAAACCAAT+AGG | + | tig0032451:9702-9721 | None:intergenic | 30.0% | |
| TACAAAAAATGCCATCATTC+AGG | + | tig0032451:9718-9737 | None:intergenic | 30.0% | |
| TTGATTTACTGTTTCCCTAT+TGG | - | tig0032451:9953-9972 | Msa1449160:intron | 30.0% | |
| ACATGCATTATTACTGTTGA+GGG | + | tig0032451:10057-10076 | None:intergenic | 30.0% | |
| AATACTTGATAGAGAAGGAT+AGG | - | tig0032451:10519-10538 | Msa1449160:intron | 30.0% | |
| !!! | ATTTTAGCTGTTAAGATTGG+GGG | - | tig0032451:10573-10592 | Msa1449160:intron | 30.0% |
| !! | TTGTTTCCTATTGGTTTGAT+TGG | - | tig0032451:10263-10282 | Msa1449160:intron | 30.0% |
| ATTAAAGCAGTAAAGTGTGA+AGG | - | tig0032451:10951-10970 | Msa1449160:intron | 30.0% | |
| ACAGCCATAGTTATCAATAT+TGG | - | tig0032451:11126-11145 | Msa1449160:intron | 30.0% | |
| CAGCCATAGTTATCAATATT+GGG | - | tig0032451:11127-11146 | Msa1449160:intron | 30.0% | |
| ! | CAACCCAATATTGATAACTA+TGG | + | tig0032451:11133-11152 | None:intergenic | 30.0% |
| TCAGATAGAGCTAATACAAA+AGG | + | tig0032451:9732-9751 | None:intergenic | 30.0% | |
| ATCTTGCATCATTACTACAA+GGG | + | tig0032451:11256-11275 | None:intergenic | 30.0% | |
| AATCTTGCATCATTACTACA+AGG | + | tig0032451:11257-11276 | None:intergenic | 30.0% | |
| TTTAAGCAATAAACATCACC+AGG | + | tig0032451:11301-11320 | None:intergenic | 30.0% | |
| TCCTAAAACTAAAACTGGTT+GGG | + | tig0032451:11807-11826 | None:intergenic | 30.0% | |
| ATCCTAAAACTAAAACTGGT+TGG | + | tig0032451:11808-11827 | None:intergenic | 30.0% | |
| ACCAGTTGTTAGAAGATATA+TGG | + | tig0032451:11961-11980 | None:intergenic | 30.0% | |
| !! | GTACTGAATTTGTTTTCTCA+TGG | - | tig0032451:12106-12125 | Msa1449160:intron | 30.0% |
| GAGGAAAATAAACCAGTAAA+AGG | + | tig0032451:12329-12348 | None:intergenic | 30.0% | |
| GAAATGTAAAAAATCACAGG+TGG | + | tig0032451:12433-12452 | None:intergenic | 30.0% | |
| GCAGAAATGTAAAAAATCAC+AGG | + | tig0032451:12436-12455 | None:intergenic | 30.0% | |
| !!! | TTGTTGATTTTCATAGTCGA+TGG | - | tig0032451:12518-12537 | Msa1449160:five_prime_UTR | 30.0% |
| !!! | TCACTGGTTTTTAGTTCTGA+AGG | + | tig0032451:8556-8575 | None:intergenic | 35.0% |
| AGCTTGACTTCGTTTAGATT+GGG | + | tig0032451:8742-8761 | None:intergenic | 35.0% | |
| !! | CAAACAGGGCTTATTTCTAT+AGG | + | tig0032451:8898-8917 | None:intergenic | 35.0% |
| CTATAGAAATAAGCCCTGTT+TGG | - | tig0032451:8896-8915 | Msa1449160:intron | 35.0% | |
| ACAAGTTGTTCATCCAAACA+GGG | + | tig0032451:8912-8931 | None:intergenic | 35.0% | |
| AACAAGTTGTTCATCCAAAC+AGG | + | tig0032451:8913-8932 | None:intergenic | 35.0% | |
| AGGAACATATGTTGCATGTT+TGG | + | tig0032451:9267-9286 | None:intergenic | 35.0% | |
| AAACAACGGAAAGAAACTCA+TGG | - | tig0032451:9379-9398 | Msa1449160:intron | 35.0% | |
| TGGTTTGAATACCTGAATGA+TGG | - | tig0032451:9704-9723 | Msa1449160:intron | 35.0% | |
| GTGACAAATGATAAGGAGAA+TGG | + | tig0032451:9755-9774 | None:intergenic | 35.0% | |
| ATACAAAAATGCCATCATGC+AGG | + | tig0032451:9987-10006 | None:intergenic | 35.0% | |
| CACATGCATTATTACTGTTG+AGG | + | tig0032451:10058-10077 | None:intergenic | 35.0% | |
| ATCTAGGCAATCAAACCAAT+AGG | + | tig0032451:10272-10291 | None:intergenic | 35.0% | |
| ATACAAAAACGCCATCATCT+AGG | + | tig0032451:10288-10307 | None:intergenic | 35.0% | |
| !! | TAGGTGGGTTGGTTATTAAT+TGG | - | tig0032451:10538-10557 | Msa1449160:intron | 35.0% |
| ATCTAGCCAATCAAACCAAT+AGG | + | tig0032451:10644-10663 | None:intergenic | 35.0% | |
| !!! | TACAACTAGCTTTTGATTGC+TGG | - | tig0032451:10860-10879 | Msa1449160:intron | 35.0% |
| AATTGTCACAGCTTAAGCTT+TGG | - | tig0032451:11096-11115 | Msa1449160:intron | 35.0% | |
| TCTTGCATCATTACTACAAG+GGG | + | tig0032451:11255-11274 | None:intergenic | 35.0% | |
| ! | GAAATCTTTTCTTGTGGTAG+AGG | - | tig0032451:11325-11344 | Msa1449160:intron | 35.0% |
| AATACAAAATGCCATCATCC+AGG | + | tig0032451:11434-11453 | None:intergenic | 35.0% | |
| AATCCTACCCAAATTACACA+CGG | + | tig0032451:11544-11563 | None:intergenic | 35.0% | |
| TCTCAGCACATAACATTGAA+AGG | + | tig0032451:11650-11669 | None:intergenic | 35.0% | |
| !!! | TCCCAACCAGTTTTAGTTTT+AGG | - | tig0032451:11803-11822 | Msa1449160:CDS | 35.0% |
| GCCATATATCTTCTAACAAC+TGG | - | tig0032451:11957-11976 | Msa1449160:intron | 35.0% | |
| TAAGACAATTGCTGAATGCT+TGG | - | tig0032451:12007-12026 | Msa1449160:intron | 35.0% | |
| AATAATGGTGGTATACCTGT+TGG | + | tig0032451:12066-12085 | None:intergenic | 35.0% | |
| ! | CTCATGGATTTTTCCTTGTT+TGG | - | tig0032451:12122-12141 | Msa1449160:intron | 35.0% |
| TGTTAGCAAAGAACCAAACA+AGG | + | tig0032451:12138-12157 | None:intergenic | 35.0% | |
| TCCAAATGATGCTTAACGAT+TGG | + | tig0032451:12221-12240 | None:intergenic | 35.0% | |
| ! | ACATGGTGTAAACCTTTTAC+TGG | - | tig0032451:12314-12333 | Msa1449160:CDS | 35.0% |
| AATGATCCTTGAAACAGTCA+TGG | + | tig0032451:12394-12413 | None:intergenic | 35.0% | |
| AAAAACCAGTGAGAAGCTGA+CGG | - | tig0032451:8564-8583 | Msa1449160:three_prime_UTR | 40.0% | |
| AAGCTACCTTGTAGATAGTG+CGG | + | tig0032451:8595-8614 | None:intergenic | 40.0% | |
| GTTAACGAGAGAGATGAAGA+AGG | + | tig0032451:8643-8662 | None:intergenic | 40.0% | |
| TTGAATTATTCACGCAGCCA+TGG | - | tig0032451:8681-8700 | Msa1449160:three_prime_UTR | 40.0% | |
| GAGCTTGACTTCGTTTAGAT+TGG | + | tig0032451:8743-8762 | None:intergenic | 40.0% | |
| AAGTCAAGCTCTTCAACCAA+TGG | - | tig0032451:8752-8771 | Msa1449160:three_prime_UTR | 40.0% | |
| AGATTACCGATCTGTCTCTT+GGG | - | tig0032451:9219-9238 | Msa1449160:intron | 40.0% | |
| TTAGTGAGCCTCTCAACAAT+GGG | + | tig0032451:9338-9357 | None:intergenic | 40.0% | |
| ACTAACTCTCTCATGATGCA+CGG | - | tig0032451:9353-9372 | Msa1449160:intron | 40.0% | |
| GAAAGAAACTCATGGCTGTT+AGG | - | tig0032451:9387-9406 | Msa1449160:intron | 40.0% | |
| TAGGATCATTAAGCATGCCA+TGG | - | tig0032451:9406-9425 | Msa1449160:intron | 40.0% | |
| TAGCAAGTGAATGATCTCCA+TGG | + | tig0032451:9426-9445 | None:intergenic | 40.0% | |
| ACCTACTTACTCATCCGAAT+CGG | - | tig0032451:9918-9937 | Msa1449160:intron | 40.0% | |
| ! | AACTTTTCATCCTCCCGATT+CGG | + | tig0032451:9935-9954 | None:intergenic | 40.0% |
| TGCAGGCAATCAAACCAATA+GGG | + | tig0032451:9970-9989 | None:intergenic | 40.0% | |
| ATGCAGGCAATCAAACCAAT+AGG | + | tig0032451:9971-9990 | None:intergenic | 40.0% | |
| ! | GAGCTGTTGATTGTTTGAAC+TGG | - | tig0032451:10221-10240 | Msa1449160:intron | 40.0% |
| TGGTTTGATTGCCTAGATGA+TGG | - | tig0032451:10274-10293 | Msa1449160:intron | 40.0% | |
| ACTTGATAGAGAAGGATAGG+TGG | - | tig0032451:10522-10541 | Msa1449160:intron | 40.0% | |
| CTTGATAGAGAAGGATAGGT+GGG | - | tig0032451:10523-10542 | Msa1449160:intron | 40.0% | |
| ! | TGGTTTGATTGGCTAGATGA+TGG | - | tig0032451:10646-10665 | Msa1449160:intron | 40.0% |
| !! | TAGCTTTTGATTGCTGGAAC+CGG | - | tig0032451:10866-10885 | Msa1449160:intron | 40.0% |
| !! | TCAATATTGGGTTGATAGCC+AGG | - | tig0032451:11139-11158 | Msa1449160:intron | 40.0% |
| AATACAAAAGGCCATCATCC+TGG | + | tig0032451:11160-11179 | None:intergenic | 40.0% | |
| TCCAGGCAATCAAACCAATA+GGG | + | tig0032451:11417-11436 | None:intergenic | 40.0% | |
| ATCCAGGCAATCAAACCAAT+AGG | + | tig0032451:11418-11437 | None:intergenic | 40.0% | |
| ATTACACACGGCATCATCTA+GGG | + | tig0032451:11532-11551 | None:intergenic | 40.0% | |
| AATTACACACGGCATCATCT+AGG | + | tig0032451:11533-11552 | None:intergenic | 40.0% | |
| AGATGATGCCGTGTGTAATT+TGG | - | tig0032451:11533-11552 | Msa1449160:intron | 40.0% | |
| GATGATGCCGTGTGTAATTT+GGG | - | tig0032451:11534-11553 | Msa1449160:intron | 40.0% | |
| TCAAAGCAAAAACTGAGGCT+TGG | - | tig0032451:11772-11791 | Msa1449160:CDS | 40.0% | |
| ! | ATTCTGGTTGCATCTTCTCT+AGG | + | tig0032451:11873-11892 | None:intergenic | 40.0% |
| AGAGAAGATGCAACCAGAAT+TGG | - | tig0032451:11873-11892 | Msa1449160:intron | 40.0% | |
| TGTTCCTAAATGCAGCTTCA+CGG | + | tig0032451:11986-12005 | None:intergenic | 40.0% | |
| CAGCTATGCGATCAAGAAAA+AGG | - | tig0032451:12171-12190 | Msa1449160:intron | 40.0% | |
| GCCAATCGTTAAGCATCATT+TGG | - | tig0032451:12217-12236 | Msa1449160:intron | 40.0% | |
| ACAAGTCAATTCAACGTGAG+AGG | + | tig0032451:12348-12367 | None:intergenic | 40.0% | |
| CTTAGTCCATGACTGTTTCA+AGG | - | tig0032451:12385-12404 | Msa1449160:intron | 40.0% | |
| TCAGCTTGGAAAACTGGTAT+TGG | + | tig0032451:12481-12500 | None:intergenic | 40.0% | |
| AATACTTCAACACGTCAGCT+TGG | + | tig0032451:12495-12514 | None:intergenic | 40.0% | |
| AAGGCAAAGCAAGAGTGACA+GGG | + | tig0032451:8537-8556 | None:intergenic | 45.0% | |
| GATTGGGATCAACTTCGACT+GGG | + | tig0032451:8726-8745 | None:intergenic | 45.0% | |
| AGATTGGGATCAACTTCGAC+TGG | + | tig0032451:8727-8746 | None:intergenic | 45.0% | |
| CAAGAGACAGATCGGTAATC+TGG | + | tig0032451:9220-9239 | None:intergenic | 45.0% | |
| CAGATTACCGATCTGTCTCT+TGG | - | tig0032451:9218-9237 | Msa1449160:intron | 45.0% | |
| GATTACCGATCTGTCTCTTG+GGG | - | tig0032451:9220-9239 | Msa1449160:intron | 45.0% | |
| GTAATCCCCAAGAGACAGAT+CGG | + | tig0032451:9228-9247 | None:intergenic | 45.0% | |
| CTGTCTCTTGGGGATTACAT+TGG | - | tig0032451:9230-9249 | Msa1449160:intron | 45.0% | |
| ACATATGTTCCTCACACTGC+TGG | - | tig0032451:9275-9294 | Msa1449160:intron | 45.0% | |
| GTTAGTGAGCCTCTCAACAA+TGG | + | tig0032451:9339-9358 | None:intergenic | 45.0% | |
| ATGATGCACGGCAGAAACAA+CGG | - | tig0032451:9365-9384 | Msa1449160:intron | 45.0% | |
| ! | TAGTTGATGCTGTCGTCAAC+AGG | - | tig0032451:9471-9490 | Msa1449160:intron | 45.0% |
| CCTACTTACTCATCCGAATC+GGG | - | tig0032451:9919-9938 | Msa1449160:intron | 45.0% | |
| TGGTTTGATTGCCTGCATGA+TGG | - | tig0032451:9973-9992 | Msa1449160:intron | 45.0% | |
| GCTCTATCTGATCATTCTCC+TGG | - | tig0032451:10009-10028 | Msa1449160:intron | 45.0% | |
| ATAGAGAAGGATAGGTGGGT+TGG | - | tig0032451:10527-10546 | Msa1449160:intron | 45.0% | |
| TAAGATTGGGGGCTGTTGAT+TGG | - | tig0032451:10584-10603 | Msa1449160:intron | 45.0% | |
| !! | TCCCTATTGGTTTGATTGCC+TGG | - | tig0032451:9966-9985 | Msa1449160:intron | 45.0% |
| TGGTTTGATTGCCTGGATGA+TGG | - | tig0032451:11420-11439 | Msa1449160:intron | 45.0% | |
| ATGCCGTGTGTAATTTGGGT+AGG | - | tig0032451:11538-11557 | Msa1449160:intron | 45.0% | |
| AACTCCAGCAGATCCAATTC+TGG | + | tig0032451:11889-11908 | None:intergenic | 45.0% | |
| TTGGATCTGCTGGAGTTGTT+AGG | - | tig0032451:11892-11911 | Msa1449160:intron | 45.0% | |
| TCCTCTTCGTCGTGTTAATC+AGG | - | tig0032451:11935-11954 | Msa1449160:intron | 45.0% | |
| GTTCCTAAATGCAGCTTCAC+GGG | + | tig0032451:11985-12004 | None:intergenic | 45.0% | |
| TGAACTCATTAACGCTGCCA+AGG | - | tig0032451:12034-12053 | Msa1449160:intron | 45.0% | |
| GAACTCATTAACGCTGCCAA+GGG | - | tig0032451:12035-12054 | Msa1449160:intron | 45.0% | |
| ATACCTGTTGGATGAACCCT+TGG | + | tig0032451:12054-12073 | None:intergenic | 45.0% | |
| TGAGATTGAGAGAGTTGCCA+AGG | - | tig0032451:12195-12214 | Msa1449160:intron | 45.0% | |
| !! | TGATGCTTAACGATTGGCCT+TGG | + | tig0032451:12215-12234 | None:intergenic | 45.0% |
| AACACGTCAGCTTGGAAAAC+TGG | + | tig0032451:12487-12506 | None:intergenic | 45.0% | |
| GAAGGCAAAGCAAGAGTGAC+AGG | + | tig0032451:8538-8557 | None:intergenic | 50.0% | |
| AACTTCGACTGGGATAGCGA+CGG | + | tig0032451:8716-8735 | None:intergenic | 50.0% | |
| GAACGTCGTCAAAGCTCCAT+TGG | + | tig0032451:8771-8790 | None:intergenic | 50.0% | |
| ! | ATGGAGCTTTGACGACGTTC+AGG | - | tig0032451:8771-8790 | Msa1449160:three_prime_UTR | 50.0% |
| GGGGATTACATTGGAGCAAG+AGG | - | tig0032451:9239-9258 | Msa1449160:intron | 50.0% | |
| ATGTTCCTCACACTGCTGGT+AGG | - | tig0032451:9279-9298 | Msa1449160:intron | 50.0% | |
| !! | GGTACTCAAAGAAGCGCTTC+AGG | - | tig0032451:9300-9319 | Msa1449160:intron | 50.0% |
| CTCAGTGTCCCATTGTTGAG+AGG | - | tig0032451:9327-9346 | Msa1449160:intron | 50.0% | |
| !! | CCCGATTCGGATGAGTAAGT+AGG | + | tig0032451:9922-9941 | None:intergenic | 50.0% |
| ACTTACTCATCCGAATCGGG+AGG | - | tig0032451:9922-9941 | Msa1449160:intron | 50.0% | |
| ! | ATTGGGGGCTGTTGATTGGT+TGG | - | tig0032451:10588-10607 | Msa1449160:intron | 50.0% |
| !! | TGGGTTGATAGCCAGGATGA+TGG | - | tig0032451:11146-11165 | Msa1449160:intron | 50.0% |
| GCAACCAGAATTGGATCTGC+TGG | - | tig0032451:11882-11901 | Msa1449160:intron | 50.0% | |
| GATCTGCTGGAGTTGTTAGG+AGG | - | tig0032451:11895-11914 | Msa1449160:intron | 50.0% | |
| GCCTGATTAACACGACGAAG+AGG | + | tig0032451:11939-11958 | None:intergenic | 50.0% | |
| ACCTTGTAGATAGTGCGGCG+CGG | + | tig0032451:8590-8609 | None:intergenic | 55.0% | |
| AGCGACGGTTTCATCAGCCA+TGG | + | tig0032451:8701-8720 | None:intergenic | 55.0% | |
| GAGTACCTACCAGCAGTGTG+AGG | + | tig0032451:9287-9306 | None:intergenic | 55.0% | |
| TGCTGGAGTTGTTAGGAGGC+AGG | - | tig0032451:11899-11918 | Msa1449160:intron | 55.0% | |
| AGTTGTTAGGAGGCAGGCTG+TGG | - | tig0032451:11905-11924 | Msa1449160:intron | 55.0% | |
| GTGCCCGTGAAGCTGCATTT+AGG | - | tig0032451:11979-11998 | Msa1449160:intron | 55.0% | |
| CTGCCAAGGGTTCATCCAAC+AGG | - | tig0032451:12048-12067 | Msa1449160:intron | 55.0% | |
| GCCGCGCCGCACTATCTACA+AGG | - | tig0032451:8586-8605 | Msa1449160:three_prime_UTR | 65.0% | |
| CGCGGCCGTCAGCTTCTCAC+TGG | + | tig0032451:8572-8591 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0032451 | gene | 8519 | 12557 | 8519 | ID=Msa1449160;Name=Msa1449160 |
| tig0032451 | mRNA | 8519 | 12557 | 8519 | ID=Msa1449160-mRNA-1;Parent=Msa1449160;Name=Msa1449160-mRNA-1;_AED=0.13;_eAED=0.13;_QI=91|1|1|1|0.75|0.6|5|329|207 |
| tig0032451 | exon | 8519 | 8902 | 8519 | ID=Msa1449160-mRNA-1:exon:16815;Parent=Msa1449160-mRNA-1 |
| tig0032451 | exon | 9007 | 9210 | 9007 | ID=Msa1449160-mRNA-1:exon:16814;Parent=Msa1449160-mRNA-1 |
| tig0032451 | exon | 11584 | 11855 | 11584 | ID=Msa1449160-mRNA-1:exon:16813;Parent=Msa1449160-mRNA-1 |
| tig0032451 | exon | 12284 | 12378 | 12284 | ID=Msa1449160-mRNA-1:exon:16812;Parent=Msa1449160-mRNA-1 |
| tig0032451 | exon | 12469 | 12557 | 12469 | ID=Msa1449160-mRNA-1:exon:16811;Parent=Msa1449160-mRNA-1 |
| tig0032451 | five_prime_UTR | 12469 | 12557 | 12469 | ID=Msa1449160-mRNA-1:five_prime_utr;Parent=Msa1449160-mRNA-1 |
| tig0032451 | five_prime_UTR | 12377 | 12378 | 12377 | ID=Msa1449160-mRNA-1:five_prime_utr;Parent=Msa1449160-mRNA-1 |
| tig0032451 | CDS | 12284 | 12376 | 12284 | ID=Msa1449160-mRNA-1:cds;Parent=Msa1449160-mRNA-1 |
| tig0032451 | CDS | 11584 | 11855 | 11584 | ID=Msa1449160-mRNA-1:cds;Parent=Msa1449160-mRNA-1 |
| tig0032451 | CDS | 9007 | 9210 | 9007 | ID=Msa1449160-mRNA-1:cds;Parent=Msa1449160-mRNA-1 |
| tig0032451 | CDS | 8848 | 8902 | 8848 | ID=Msa1449160-mRNA-1:cds;Parent=Msa1449160-mRNA-1 |
| tig0032451 | three_prime_UTR | 8519 | 8847 | 8519 | ID=Msa1449160-mRNA-1:three_prime_utr;Parent=Msa1449160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
