Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566240 | XP_003629967.1 | 95.261 | 422 | 15 | 2 | 1 | 417 | 1 | 422 | 0.0 | 823 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566240 | sp|Q681Y3|Y1099_ARATH | 68.564 | 404 | 115 | 3 | 26 | 417 | 29 | 432 | 0.0 | 575 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566240 | G7L8V3 | 95.261 | 422 | 15 | 2 | 1 | 417 | 1 | 422 | 0.0 | 823 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0566240 | Msa0749160 | 0.830169 | 3.416839e-55 | -8.615850e-47 |
| Msa0566240 | Msa0927190 | 0.809157 | 2.173979e-50 | -8.615850e-47 |
| Msa0566240 | Msa0999480 | 0.819998 | 8.650293e-53 | -8.615850e-47 |
| Msa0566240 | Msa1067910 | 0.811869 | 5.642987e-51 | -8.615850e-47 |
| Msa0566240 | Msa1071380 | 0.805731 | 1.158727e-49 | -8.615850e-47 |
| Msa0566240 | Msa1076120 | 0.800001 | 1.768836e-48 | -8.615850e-47 |
| Msa0566240 | Msa1223050 | 0.810306 | 1.231030e-50 | -8.615850e-47 |
| Msa0566240 | Msa1395580 | 0.815949 | 7.111515e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566240 | MtrunA17_Chr8g0380691 | 95.261 | 422 | 15 | 2 | 1 | 417 | 1 | 422 | 0.0 | 823 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566240 | AT1G60990.3 | 68.564 | 404 | 115 | 3 | 26 | 417 | 29 | 432 | 0.0 | 575 |
| Msa0566240 | AT1G60990.2 | 68.564 | 404 | 115 | 3 | 26 | 417 | 29 | 432 | 0.0 | 575 |
| Msa0566240 | AT1G60990.1 | 68.564 | 404 | 115 | 3 | 26 | 417 | 29 | 432 | 0.0 | 575 |
| Msa0566240 | AT1G11860.2 | 25.444 | 338 | 231 | 11 | 88 | 408 | 70 | 403 | 9.10e-13 | 70.1 |
| Msa0566240 | AT1G11860.1 | 25.444 | 338 | 231 | 11 | 88 | 408 | 70 | 403 | 9.10e-13 | 70.1 |
| Msa0566240 | AT1G11860.3 | 25.444 | 338 | 231 | 11 | 88 | 408 | 85 | 418 | 9.52e-13 | 70.1 |
Find 119 sgRNAs with CRISPR-Local
Find 455 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCTCTCCTTGTTCTAAAT+TGG | 0.142935 | 4_1:-67284978 | Msa0566240:five_prime_UTR |
| GTATCTTACTTGGCTACTTT+TGG | 0.165355 | 4_1:+67282194 | None:intergenic |
| ACTGCAGGTGCCGAGGTTTC+TGG | 0.175027 | 4_1:-67283661 | Msa0566240:CDS |
| TTTCCAACTCCTATAGTTAT+AGG | 0.205103 | 4_1:+67281526 | None:intergenic |
| TCTAAATTGGATGGATATTC+TGG | 0.219951 | 4_1:-67284965 | Msa0566240:intron |
| TGTTGACATCATCATTATTA+TGG | 0.291745 | 4_1:-67278044 | Msa0566240:three_prime_UTR |
| ACCCATCGACCATGACTTCT+TGG | 0.296655 | 4_1:-67284699 | Msa0566240:intron |
| CAGTGTTGTCATTACGGATT+AGG | 0.308429 | 4_1:+67284883 | None:intergenic |
| TACTTACTTGTTCAGCATTT+CGG | 0.314008 | 4_1:+67282424 | None:intergenic |
| GCAAACGAGCTTATTTGTTT+TGG | 0.315922 | 4_1:-67282223 | Msa0566240:CDS |
| CCATCGGAACACTTCGGATT+AGG | 0.320328 | 4_1:-67278209 | Msa0566240:CDS |
| ACGTCCTGGAGGCCTGTCTA+TGG | 0.323499 | 4_1:-67278903 | Msa0566240:CDS |
| CACTGGACGCCGCAGACAAT+GGG | 0.333391 | 4_1:-67283600 | Msa0566240:CDS |
| TTTGAGAGTAAACAAGGTTT+GGG | 0.334546 | 4_1:+67284803 | None:intergenic |
| TTGAACGTAGGTGATCTTAT+TGG | 0.350341 | 4_1:-67282094 | Msa0566240:CDS |
| CTGCAGGTGCCGAGGTTTCT+GGG | 0.353745 | 4_1:-67283660 | Msa0566240:CDS |
| ATGGAGTCAAACAGAGGTTA+TGG | 0.353861 | 4_1:-67278729 | Msa0566240:CDS |
| TGCTCAAGGGGCTGTTGCAA+TGG | 0.369762 | 4_1:-67281431 | Msa0566240:CDS |
| CTTGTTCAGCATTTCGGTAA+TGG | 0.379644 | 4_1:+67282430 | None:intergenic |
| GTTTGAGAGTAAACAAGGTT+TGG | 0.394222 | 4_1:+67284802 | None:intergenic |
| GCTCAAGGGGCTGTTGCAAT+GGG | 0.395855 | 4_1:-67281430 | Msa0566240:CDS |
| TAGTGACAGTGTTGTCATTA+CGG | 0.398939 | 4_1:+67284877 | None:intergenic |
| TCTCAACAGCGTCCGCCATC+TGG | 0.399031 | 4_1:-67278098 | Msa0566240:CDS |
| TGGTTTCAGCAGAGACTTGT+AGG | 0.401443 | 4_1:-67282454 | Msa0566240:CDS |
| TCGTTTGTGAGCTCCATTCC+AGG | 0.405499 | 4_1:+67278931 | None:intergenic |
| CGGCAGCTGCTCCATCTGTC+TGG | 0.407182 | 4_1:-67281465 | Msa0566240:CDS |
| CCAGAGTACTGCAAACTTTG+AGG | 0.413393 | 4_1:-67282822 | Msa0566240:CDS |
| AACTTTGAGGGTCTACAGGC+AGG | 0.423954 | 4_1:-67282809 | Msa0566240:CDS |
| ATTGTTGGAGACAACATCAT+TGG | 0.427946 | 4_1:-67278146 | Msa0566240:CDS |
| TCACACTTCGGCCGGATAAG+AGG | 0.440438 | 4_1:-67283081 | Msa0566240:intron |
| AAATGTTGATAAGTGCCATA+TGG | 0.444800 | 4_1:+67282067 | None:intergenic |
| GATAAGCAGCCTATAACTAT+AGG | 0.445173 | 4_1:-67281535 | Msa0566240:CDS |
| GGTGCCGAGGTTTCTGGGGA+AGG | 0.446680 | 4_1:-67283655 | Msa0566240:CDS |
| CTCAGGTTGTTACAAAGGAC+AGG | 0.451833 | 4_1:-67278779 | Msa0566240:intron |
| TGCAAACTTTGAGGGTCTAC+AGG | 0.456706 | 4_1:-67282813 | Msa0566240:CDS |
| TTCTCAGGAAGGCCTGCTCC+TGG | 0.456760 | 4_1:-67278949 | Msa0566240:intron |
| GCACTGGACGCCGCAGACAA+TGG | 0.458110 | 4_1:-67283601 | Msa0566240:CDS |
| TGGAGTCAAACAGAGGTTAT+GGG | 0.459832 | 4_1:-67278728 | Msa0566240:CDS |
| GTGAGCTCCATTCCAGGAGC+AGG | 0.460015 | 4_1:+67278937 | None:intergenic |
| CAGAGTACTGCAAACTTTGA+GGG | 0.462222 | 4_1:-67282821 | Msa0566240:CDS |
| GAAGGAGACAGTGTAATTGT+TGG | 0.468448 | 4_1:-67278161 | Msa0566240:CDS |
| AAGTCATGGTCGATGGGTGG+AGG | 0.470425 | 4_1:+67284704 | None:intergenic |
| AAATGAAAGTACCTCTTATC+CGG | 0.476064 | 4_1:+67283070 | None:intergenic |
| TTGCAATGGGTTCTAATGCT+TGG | 0.480918 | 4_1:-67281417 | Msa0566240:CDS |
| TACATGGCACATAAGTTTAA+CGG | 0.481205 | 4_1:+67277906 | None:intergenic |
| CTGAGGTTTGAGAGTAAACA+AGG | 0.482247 | 4_1:+67284797 | None:intergenic |
| CTTTCTGCAGCCGCAGAACC+TGG | 0.482443 | 4_1:-67278697 | Msa0566240:CDS |
| GATCTTATTGGAAAACCATA+TGG | 0.483670 | 4_1:-67282082 | Msa0566240:CDS |
| AGAAATTGAGTTCCATAGAC+AGG | 0.487933 | 4_1:+67278891 | None:intergenic |
| CCTCAAAGTTTGCAGTACTC+TGG | 0.489181 | 4_1:+67282822 | None:intergenic |
| GCCAGGCTCATAACATATGA+TGG | 0.495682 | 4_1:-67278748 | Msa0566240:CDS |
| AGGAAGGCCTGCTCCTGGAA+TGG | 0.496441 | 4_1:-67278944 | Msa0566240:CDS |
| ATTATTATGGTCAAGTATGA+TGG | 0.501347 | 4_1:-67278031 | Msa0566240:three_prime_UTR |
| GGTTTGGGGAATAGAGAAGA+TGG | 0.501595 | 4_1:+67284818 | None:intergenic |
| CAGCCTATAACTATAGGAGT+TGG | 0.503689 | 4_1:-67281529 | Msa0566240:CDS |
| TCTCCTTGTTCTAAATTGGA+TGG | 0.504741 | 4_1:-67284974 | Msa0566240:five_prime_UTR |
| GGTCGATGGGTGGAGGGGAA+AGG | 0.506087 | 4_1:+67284711 | None:intergenic |
| GGAAATATCATTTCTGAAGG+TGG | 0.508021 | 4_1:-67281508 | Msa0566240:CDS |
| GTGCCGAGGTTTCTGGGGAA+GGG | 0.511609 | 4_1:-67283654 | Msa0566240:CDS |
| AGTTCCATAGACAGGCCTCC+AGG | 0.514728 | 4_1:+67278899 | None:intergenic |
| AGTCATGGTCGATGGGTGGA+GGG | 0.517465 | 4_1:+67284705 | None:intergenic |
| TCCATCATATGTTATGAGCC+TGG | 0.520694 | 4_1:+67278747 | None:intergenic |
| TATTGCACATGCGTGGATCA+TGG | 0.521802 | 4_1:-67282605 | Msa0566240:intron |
| CACAAACGAATTCAACGTCC+TGG | 0.523539 | 4_1:-67278917 | Msa0566240:CDS |
| TGGATCTTTCACACTTCGGC+CGG | 0.524782 | 4_1:-67283089 | Msa0566240:CDS |
| TACCAAGAAGTCATGGTCGA+TGG | 0.526929 | 4_1:+67284697 | None:intergenic |
| GATTCTTGTTCTTGTTGCGT+TGG | 0.532883 | 4_1:+67284762 | None:intergenic |
| GGTAGTATTATCACTGTGGA+TGG | 0.539084 | 4_1:-67278676 | Msa0566240:CDS |
| CAGACAGATGGAGCAGCTGC+CGG | 0.543197 | 4_1:+67281466 | None:intergenic |
| AGAATAGCTTTCCAGACAGA+TGG | 0.545861 | 4_1:+67281454 | None:intergenic |
| ATATCTATAGTTCGAGCTGT+TGG | 0.554752 | 4_1:+67282625 | None:intergenic |
| ACCAAGAAGTCATGGTCGAT+GGG | 0.558900 | 4_1:+67284698 | None:intergenic |
| CAGGACACTGTCAAAACTGC+AGG | 0.559001 | 4_1:-67283676 | Msa0566240:CDS |
| TGGAAAGCTATTCTTGCTCA+AGG | 0.559551 | 4_1:-67281445 | Msa0566240:CDS |
| TCGGATTAGGTTACATCAAG+AGG | 0.561096 | 4_1:-67278196 | Msa0566240:CDS |
| TTTCGAAGTTTGAAGCAAGA+TGG | 0.561203 | 4_1:+67284854 | None:intergenic |
| GTCATGGTCGATGGGTGGAG+GGG | 0.561638 | 4_1:+67284706 | None:intergenic |
| GTTGGAAATATCATTTCTGA+AGG | 0.563837 | 4_1:-67281511 | Msa0566240:CDS |
| GAACTCAATTTCTCTAAACA+AGG | 0.564868 | 4_1:-67278881 | Msa0566240:CDS |
| GAAAGCTATTCTTGCTCAAG+GGG | 0.565925 | 4_1:-67281443 | Msa0566240:CDS |
| GTTGTGGATCTTTCACACTT+CGG | 0.568328 | 4_1:-67283093 | Msa0566240:CDS |
| AAATTGACTAGTTACACCTC+TGG | 0.573087 | 4_1:-67278239 | Msa0566240:CDS |
| TTCCGATGGCTTCCTTCCAG+AGG | 0.575249 | 4_1:+67278223 | None:intergenic |
| AAGAGGCAAGCTGCTTCAGA+AGG | 0.575817 | 4_1:-67278179 | Msa0566240:CDS |
| GGAAAGCTATTCTTGCTCAA+GGG | 0.577897 | 4_1:-67281444 | Msa0566240:CDS |
| GGACGCTGTTGAGAAAGAAA+AGG | 0.583221 | 4_1:+67278107 | None:intergenic |
| TTGCAGTACTCTGGTTGTGA+AGG | 0.585064 | 4_1:+67282831 | None:intergenic |
| TCATAACGATGAAGAAGCAC+TGG | 0.586449 | 4_1:-67283617 | Msa0566240:CDS |
| GAGAAGATGGAGACCATGGT+TGG | 0.589430 | 4_1:+67284831 | None:intergenic |
| AGGGGAAAGGTCGAAAGATG+AGG | 0.590567 | 4_1:+67284724 | None:intergenic |
| TGCAGGTGCCGAGGTTTCTG+GGG | 0.597176 | 4_1:-67283659 | Msa0566240:CDS |
| GTGATGGAAAGCTTGAACGT+AGG | 0.598517 | 4_1:-67282106 | Msa0566240:CDS |
| GGAGTCAAACAGAGGTTATG+GGG | 0.600336 | 4_1:-67278727 | Msa0566240:CDS |
| GATAATACTACCAGGTTCTG+CGG | 0.603697 | 4_1:+67278687 | None:intergenic |
| GATCCCTTCCCCAGAAACCT+CGG | 0.605258 | 4_1:+67283651 | None:intergenic |
| CCTAATCCGAAGTGTTCCGA+TGG | 0.607681 | 4_1:+67278209 | None:intergenic |
| AATAAGTTGCGAGTTATCCA+AGG | 0.609619 | 4_1:-67281394 | Msa0566240:intron |
| ACTTTGAGGGTCTACAGGCA+GGG | 0.610437 | 4_1:-67282808 | Msa0566240:CDS |
| TGACTAGTTACACCTCTGGA+AGG | 0.612902 | 4_1:-67278235 | Msa0566240:CDS |
| AGGAAGCCATCGGAACACTT+CGG | 0.620483 | 4_1:-67278215 | Msa0566240:CDS |
| AAGAAGTCATGGTCGATGGG+TGG | 0.621241 | 4_1:+67284701 | None:intergenic |
| TGGAAATTACCAAGAAGTCA+TGG | 0.623744 | 4_1:+67284690 | None:intergenic |
| CTATAGATATTGCACATGCG+TGG | 0.626627 | 4_1:-67282612 | Msa0566240:CDS |
| TGTCAAAACTGCAGGTGCCG+AGG | 0.627788 | 4_1:-67283668 | Msa0566240:CDS |
| TACAACAACCCCATTGTCTG+CGG | 0.628493 | 4_1:+67283591 | None:intergenic |
| AAGAACAACATGATACTACA+TGG | 0.631653 | 4_1:+67277890 | None:intergenic |
| TATCCATCCAATTTAGAACA+AGG | 0.631714 | 4_1:+67284971 | None:intergenic |
| AATAGAGAAGATGGAGACCA+TGG | 0.638511 | 4_1:+67284827 | None:intergenic |
| GTTGGTGAGAGCAGAATCTG+AGG | 0.643517 | 4_1:+67284780 | None:intergenic |
| AAGGACAGGAGACTATAGCC+AGG | 0.644196 | 4_1:-67278765 | Msa0566240:CDS |
| AACTCAATTTCTCTAAACAA+GGG | 0.653020 | 4_1:-67278880 | Msa0566240:intron |
| TCAAACTTCGAAACCAACCA+TGG | 0.657274 | 4_1:-67284844 | Msa0566240:CDS |
| CACCTCTGGAAGGAAGCCAT+CGG | 0.660284 | 4_1:-67278225 | Msa0566240:CDS |
| TTGAGAGTAAACAAGGTTTG+GGG | 0.664845 | 4_1:+67284804 | None:intergenic |
| TCCACAGTGATAATACTACC+AGG | 0.673931 | 4_1:+67278679 | None:intergenic |
| ACTGGACGCCGCAGACAATG+GGG | 0.693325 | 4_1:-67283599 | Msa0566240:CDS |
| ACCTGGTAGTATTATCACTG+TGG | 0.707528 | 4_1:-67278680 | Msa0566240:CDS |
| CATATGATGGAGTCAAACAG+AGG | 0.709677 | 4_1:-67278735 | Msa0566240:CDS |
| AAACGAATTCAACGTCCTGG+AGG | 0.732724 | 4_1:-67278914 | Msa0566240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATTTCATATTATAATAC+AGG | - | chr4_1:67280134-67280153 | Msa0566240:intron | 10.0% |
| !!! | TTTTTTGTTAAAAATAAGAA+AGG | + | chr4_1:67280942-67280961 | None:intergenic | 10.0% |
| !!! | TCTCAAATATATATATATTT+TGG | - | chr4_1:67281270-67281289 | Msa0566240:intron | 10.0% |
| !! | ATGTATATATATATATATAG+AGG | - | chr4_1:67282922-67282941 | Msa0566240:intron | 10.0% |
| !! | TGTATATATATATATATAGA+GGG | - | chr4_1:67282923-67282942 | Msa0566240:intron | 10.0% |
| !! | TCCTTAAATTGATTAATTTA+TGG | - | chr4_1:67279409-67279428 | Msa0566240:intron | 15.0% |
| !! | ACCATAAATTAATCAATTTA+AGG | + | chr4_1:67279413-67279432 | None:intergenic | 15.0% |
| !!! | TAATTTTAACACGAATATTT+TGG | - | chr4_1:67279945-67279964 | Msa0566240:intron | 15.0% |
| !!! | TAAAAATGATTTTTGAAAGA+GGG | + | chr4_1:67280276-67280295 | None:intergenic | 15.0% |
| !!! | TTGTTCTTTTATCTTATTTT+CGG | + | chr4_1:67280484-67280503 | None:intergenic | 15.0% |
| !! | CATTAACTAAATGATTTATA+TGG | - | chr4_1:67280537-67280556 | Msa0566240:intron | 15.0% |
| !! | TTTAATATAATTACATGAAC+AGG | - | chr4_1:67280712-67280731 | Msa0566240:intron | 15.0% |
| !!! | ATATTTAAGTTATGTAAAAG+AGG | + | chr4_1:67281120-67281139 | None:intergenic | 15.0% |
| !!! | ATATATATTTTGGAATTTGT+AGG | - | chr4_1:67281280-67281299 | Msa0566240:intron | 15.0% |
| !! | TAAATAATAACAACGTAAAA+CGG | + | chr4_1:67282531-67282550 | None:intergenic | 15.0% |
| !! | TTGAAACCAATTAATTATTA+CGG | - | chr4_1:67283364-67283383 | Msa0566240:intron | 15.0% |
| !!! | GATTCTAAATTTTTCTATTA+AGG | - | chr4_1:67284348-67284367 | Msa0566240:intron | 15.0% |
| !!! | ATATAGATAGAATTTAGAAT+TGG | + | chr4_1:67284418-67284437 | None:intergenic | 15.0% |
| !!! | TTATTTATTCGATTTGCTTA+TGG | - | chr4_1:67278206-67278225 | Msa0566240:CDS | 20.0% |
| !! | GAAATAAGTAGATTATACTT+TGG | - | chr4_1:67278259-67278278 | Msa0566240:intron | 20.0% |
| !! | TTCTATATAACAAGAATCAA+TGG | - | chr4_1:67278379-67278398 | Msa0566240:intron | 20.0% |
| !!! | TATATCATTTTCTTTCATCA+AGG | - | chr4_1:67278526-67278545 | Msa0566240:intron | 20.0% |
| !!! | AAACTTTTGTCAATGAAAAT+AGG | + | chr4_1:67278590-67278609 | None:intergenic | 20.0% |
| !!! | ATGATAGTCATTTTCAATTT+AGG | - | chr4_1:67278798-67278817 | Msa0566240:intron | 20.0% |
| !!! | TGATAGTCATTTTCAATTTA+GGG | - | chr4_1:67278799-67278818 | Msa0566240:intron | 20.0% |
| !! | AATAGACAATAGTGTAAAAT+TGG | + | chr4_1:67278988-67279007 | None:intergenic | 20.0% |
| !! | TATTGTAATAAGAGGAAATA+GGG | + | chr4_1:67279018-67279037 | None:intergenic | 20.0% |
| !! | ATATTGTAATAAGAGGAAAT+AGG | + | chr4_1:67279019-67279038 | None:intergenic | 20.0% |
| !! | AGAAGTAATATTGTAATAAG+AGG | + | chr4_1:67279026-67279045 | None:intergenic | 20.0% |
| !!! | TCATTTGGGTATTTTAAAAA+AGG | + | chr4_1:67279070-67279089 | None:intergenic | 20.0% |
| !! | GGTAATAATTAAACAAACAA+AGG | + | chr4_1:67279134-67279153 | None:intergenic | 20.0% |
| !!! | TAAATTTAAAAGTTTTGGGA+GGG | + | chr4_1:67279844-67279863 | None:intergenic | 20.0% |
| !!! | TTAAATTTAAAAGTTTTGGG+AGG | + | chr4_1:67279845-67279864 | None:intergenic | 20.0% |
| !! | ATAATACAGGATTAAGTAAT+AGG | - | chr4_1:67280147-67280166 | Msa0566240:intron | 20.0% |
| !!! | GTAAAAATGATTTTTGAAAG+AGG | + | chr4_1:67280277-67280296 | None:intergenic | 20.0% |
| !!! | AACTTGTATATTTTACTGTT+AGG | - | chr4_1:67280438-67280457 | Msa0566240:intron | 20.0% |
| !!! | TGTTTTTGATAATATTCATC+AGG | + | chr4_1:67280519-67280538 | None:intergenic | 20.0% |
| !! | ATTTATATGGAATGATTTCA+AGG | - | chr4_1:67280550-67280569 | Msa0566240:intron | 20.0% |
| !! | TTTACAAAAAATAACCAGTA+AGG | + | chr4_1:67280813-67280832 | None:intergenic | 20.0% |
| !!! | TTTGTAATTACTAGTTTTCT+TGG | - | chr4_1:67280834-67280853 | Msa0566240:intron | 20.0% |
| !!! | TTGTAATTACTAGTTTTCTT+GGG | - | chr4_1:67280835-67280854 | Msa0566240:intron | 20.0% |
| !! | GTTAAAAATAAGAAAGGTTA+AGG | + | chr4_1:67280936-67280955 | None:intergenic | 20.0% |
| !! | AGAATATTAACAGATAATGT+AGG | + | chr4_1:67281240-67281259 | None:intergenic | 20.0% |
| !!! | ATTTCCTTTCATTTTTCTTA+AGG | - | chr4_1:67281519-67281538 | Msa0566240:CDS | 20.0% |
| !! | TTGAATACATCTTAAAGTTA+TGG | + | chr4_1:67281671-67281690 | None:intergenic | 20.0% |
| !!! | ACTTTAAGATGTATTCAAAA+TGG | - | chr4_1:67281673-67281692 | Msa0566240:intron | 20.0% |
| !! | AAAAAAAAACAGGAAAATAG+AGG | - | chr4_1:67281967-67281986 | Msa0566240:intron | 20.0% |
| !!! | TTTACGTTGTTATTATTTAC+CGG | - | chr4_1:67282532-67282551 | Msa0566240:intron | 20.0% |
| !! | ACTCATAAATGTATAGATAT+AGG | + | chr4_1:67282640-67282659 | None:intergenic | 20.0% |
| !!! | GCATATAATATTTGTTTTTG+AGG | - | chr4_1:67282823-67282842 | Msa0566240:CDS | 20.0% |
| !!! | AATTTTTGTGAGAAAATACA+GGG | + | chr4_1:67283133-67283152 | None:intergenic | 20.0% |
| !!! | TAATTGGTTTCAACATATTT+AGG | + | chr4_1:67283357-67283376 | None:intergenic | 20.0% |
| !! | TGAAACCAATTAATTATTAC+GGG | - | chr4_1:67283365-67283384 | Msa0566240:intron | 20.0% |
| !!! | ATTAATTAAGGATTTAGAAC+AGG | - | chr4_1:67283511-67283530 | Msa0566240:intron | 20.0% |
| !!! | TTAATTAAGGATTTAGAACA+GGG | - | chr4_1:67283512-67283531 | Msa0566240:intron | 20.0% |
| !!! | TAGTTCAAAATCTTGATTTT+TGG | - | chr4_1:67284765-67284784 | Msa0566240:CDS | 20.0% |
| !!! | AGTTCAAAATCTTGATTTTT+GGG | - | chr4_1:67284766-67284785 | Msa0566240:CDS | 20.0% |
| ! | AAGTGATAATTGAGAAATGT+TGG | + | chr4_1:67278173-67278192 | None:intergenic | 25.0% |
| ! | ATTATACTTTGGATGATGAT+TGG | - | chr4_1:67278270-67278289 | Msa0566240:intron | 25.0% |
| !!! | GATAGTCATTTTCAATTTAG+GGG | - | chr4_1:67278800-67278819 | Msa0566240:intron | 25.0% |
| !!! | ATAGTCATTTTCAATTTAGG+GGG | - | chr4_1:67278801-67278820 | Msa0566240:intron | 25.0% |
| !! | CTTTTCTTGAAGAAATGAAA+AGG | + | chr4_1:67278896-67278915 | None:intergenic | 25.0% |
| ! | GAAAAGAGAAAAAATTACAC+CGG | - | chr4_1:67278910-67278929 | Msa0566240:CDS | 25.0% |
| ! | ATTACCACTTTCTTAGATAA+TGG | - | chr4_1:67279676-67279695 | Msa0566240:intron | 25.0% |
| ! | ACAGAAAAATGCAATAATGT+TGG | - | chr4_1:67280363-67280382 | Msa0566240:intron | 25.0% |
| !!! | GTACATATTTTTTGCTGATA+AGG | - | chr4_1:67280572-67280591 | Msa0566240:intron | 25.0% |
| !!! | ATATTACTGACTTTTGCTTT+TGG | - | chr4_1:67281055-67281074 | Msa0566240:intron | 25.0% |
| !! | AACATTTTCCTATTATCCTA+TGG | - | chr4_1:67281091-67281110 | Msa0566240:intron | 25.0% |
| ! | AAAGGAAAGATGAAAATACT+TGG | + | chr4_1:67281199-67281218 | None:intergenic | 25.0% |
| !! | AGTATTTTCATCTTTCCTTT+TGG | - | chr4_1:67281199-67281218 | Msa0566240:intron | 25.0% |
| !! | TCTTTAAGCTTTTTACCAAA+AGG | + | chr4_1:67281217-67281236 | None:intergenic | 25.0% |
| ! | ACATCCTTAAGAAAAATGAA+AGG | + | chr4_1:67281526-67281545 | None:intergenic | 25.0% |
| ! | GGATGTATATTTGTTTCAAA+TGG | - | chr4_1:67281540-67281559 | Msa0566240:CDS | 25.0% |
| ! | GTTATCTATTTGATAGAAAC+TGG | - | chr4_1:67281576-67281595 | Msa0566240:intron | 25.0% |
| ! | TGTAATGGTATATAAAGAGA+GGG | + | chr4_1:67281790-67281809 | None:intergenic | 25.0% |
| ! | TTGTAATGGTATATAAAGAG+AGG | + | chr4_1:67281791-67281810 | None:intergenic | 25.0% |
| !!! | AATTTTGTTATGGCTTGTAA+TGG | + | chr4_1:67281805-67281824 | None:intergenic | 25.0% |
| ! | AGAGTTGAGAAAAAAAAAAC+AGG | - | chr4_1:67281957-67281976 | Msa0566240:intron | 25.0% |
| ! | CTATCTAATAACGAGTAATT+AGG | - | chr4_1:67282322-67282341 | Msa0566240:intron | 25.0% |
| ! | GAACTTTCTATATCCAATTA+GGG | - | chr4_1:67282344-67282363 | Msa0566240:intron | 25.0% |
| !! | GTATATGTATGTGTTTTCAA+AGG | - | chr4_1:67282411-67282430 | Msa0566240:intron | 25.0% |
| ! | AAATAAAGCCTAGAAAAATG+AGG | + | chr4_1:67282588-67282607 | None:intergenic | 25.0% |
| ! | ATATGCTTAGTAATCTTGTA+GGG | + | chr4_1:67282809-67282828 | None:intergenic | 25.0% |
| ! | TATATGCTTAGTAATCTTGT+AGG | + | chr4_1:67282810-67282829 | None:intergenic | 25.0% |
| ! | TATTTATAATGAGAGATGAG+AGG | - | chr4_1:67282964-67282983 | Msa0566240:intron | 25.0% |
| !! | CAATTTTTGTGAGAAAATAC+AGG | + | chr4_1:67283134-67283153 | None:intergenic | 25.0% |
| ! | CACAAATTTATTCACATTTG+AGG | + | chr4_1:67283273-67283292 | None:intergenic | 25.0% |
| ! | AATAGCCCGTAATAATTAAT+TGG | + | chr4_1:67283373-67283392 | None:intergenic | 25.0% |
| !! | TAATTAAGGATTTAGAACAG+GGG | - | chr4_1:67283513-67283532 | Msa0566240:intron | 25.0% |
| ! | TATAGTAATGATTGATCCAA+AGG | - | chr4_1:67283709-67283728 | Msa0566240:intron | 25.0% |
| ! | AACTCAATTTCTCTAAACAA+GGG | - | chr4_1:67283960-67283979 | Msa0566240:intron | 25.0% |
| !! | GCTTAATATTTTATGCAGAT+TGG | + | chr4_1:67284011-67284030 | None:intergenic | 25.0% |
| ! | TTCAAATCTAATGTCTTCTT+TGG | - | chr4_1:67284235-67284254 | Msa0566240:intron | 25.0% |
| ! | TGTTGACATCATCATTATTA+TGG | - | chr4_1:67284796-67284815 | Msa0566240:CDS | 25.0% |
| ! | ATTATTATGGTCAAGTATGA+TGG | - | chr4_1:67284809-67284828 | Msa0566240:CDS | 25.0% |
| ! | TAGCAATCAAAAAAAGAAAC+TGG | - | chr4_1:67284878-67284897 | Msa0566240:exon | 25.0% |
| ! | AGCAATCAAAAAAAGAAACT+GGG | - | chr4_1:67284879-67284898 | Msa0566240:exon | 25.0% |
| ! | TATCCATCCAATTTAGAACA+AGG | + | chr4_1:67277872-67277891 | None:intergenic | 30.0% |
| TCTAAATTGGATGGATATTC+TGG | - | chr4_1:67277875-67277894 | Msa0566240:three_prime_UTR | 30.0% | |
| TTTGAGAGTAAACAAGGTTT+GGG | + | chr4_1:67278040-67278059 | None:intergenic | 30.0% | |
| ! | CCAAACTACAAACTTTGAAA+AGG | + | chr4_1:67278454-67278473 | None:intergenic | 30.0% |
| ! | CCTTTTCAAAGTTTGTAGTT+TGG | - | chr4_1:67278451-67278470 | Msa0566240:intron | 30.0% |
| TAATCCCTGTCAATGAAAAT+AGG | + | chr4_1:67278561-67278580 | None:intergenic | 30.0% | |
| AGGCATCATAATCATATACA+AGG | - | chr4_1:67278746-67278765 | Msa0566240:CDS | 30.0% | |
| ATGTATAAGAACCATAGTGT+AGG | + | chr4_1:67278780-67278799 | None:intergenic | 30.0% | |
| ACTCATACTATAAGCACATA+CGG | + | chr4_1:67278860-67278879 | None:intergenic | 30.0% | |
| ACTCAAATTAATCCTTGTAC+CGG | + | chr4_1:67278932-67278951 | None:intergenic | 30.0% | |
| TCTCGAGAGCAAAAAAATTA+AGG | - | chr4_1:67279094-67279113 | Msa0566240:intron | 30.0% | |
| ATTATTACCTTTACTGTTGC+AGG | - | chr4_1:67279145-67279164 | Msa0566240:intron | 30.0% | |
| ! | ACTAGCTTACATGACTTTAA+TGG | - | chr4_1:67279506-67279525 | Msa0566240:intron | 30.0% |
| CTAGCTTACATGACTTTAAT+GGG | - | chr4_1:67279507-67279526 | Msa0566240:intron | 30.0% | |
| TAGAACTTCAACACTGTATT+AGG | + | chr4_1:67279621-67279640 | None:intergenic | 30.0% | |
| GCATGTTTAGATACTTATCT+AGG | - | chr4_1:67279650-67279669 | Msa0566240:intron | 30.0% | |
| GAATCCATTATCTAAGAAAG+TGG | + | chr4_1:67279683-67279702 | None:intergenic | 30.0% | |
| TCTGTGCAATCTAATAACAT+AGG | - | chr4_1:67279725-67279744 | Msa0566240:intron | 30.0% | |
| CAATCTAATAACATAGGTTG+TGG | - | chr4_1:67279731-67279750 | Msa0566240:intron | 30.0% | |
| !! | AAATGAAAGTACCTCTTATC+CGG | + | chr4_1:67279773-67279792 | None:intergenic | 30.0% |
| ATAACTTGAAATACAGTCAG+TGG | - | chr4_1:67279968-67279987 | Msa0566240:intron | 30.0% | |
| GAAAAATGCAATAATGTTGG+TGG | - | chr4_1:67280366-67280385 | Msa0566240:intron | 30.0% | |
| TACTTACTTGTTCAGCATTT+CGG | + | chr4_1:67280419-67280438 | None:intergenic | 30.0% | |
| !!! | TATCTTACTTGGCTACTTTT+GGG | + | chr4_1:67280648-67280667 | None:intergenic | 30.0% |
| ! | CTGTGATAATGTATCTTACT+TGG | + | chr4_1:67280659-67280678 | None:intergenic | 30.0% |
| ATAATTACATGAACAGGTGA+TGG | - | chr4_1:67280718-67280737 | Msa0566240:intron | 30.0% | |
| GATCTTATTGGAAAACCATA+TGG | - | chr4_1:67280758-67280777 | Msa0566240:intron | 30.0% | |
| ! | AAATGTTGATAAGTGCCATA+TGG | + | chr4_1:67280776-67280795 | None:intergenic | 30.0% |
| ACTTAAATATACACAGCTTC+TGG | - | chr4_1:67281149-67281168 | Msa0566240:intron | 30.0% | |
| TTTCCAACTCCTATAGTTAT+AGG | + | chr4_1:67281317-67281336 | None:intergenic | 30.0% | |
| GTTGGAAATATCATTTCTGA+AGG | - | chr4_1:67281329-67281348 | Msa0566240:intron | 30.0% | |
| !!! | TTTTTCATTGATGATGTCTC+CGG | - | chr4_1:67281355-67281374 | Msa0566240:intron | 30.0% |
| GTCTAAACAATTTAGTACCT+TGG | + | chr4_1:67281466-67281485 | None:intergenic | 30.0% | |
| GGTACTAAATTGTTTAGACT+AGG | - | chr4_1:67281467-67281486 | Msa0566240:CDS | 30.0% | |
| AGGAAATGACTACAAGATAT+AGG | + | chr4_1:67281506-67281525 | None:intergenic | 30.0% | |
| ! | ACATACACTATTGTCAGTTT+TGG | + | chr4_1:67281648-67281667 | None:intergenic | 30.0% |
| !!! | TTCAGGTTTTTAAGTAGGAT+CGG | - | chr4_1:67281864-67281883 | Msa0566240:intron | 30.0% |
| !!! | ACTTTCTCTGTTATTTTGCT+TGG | + | chr4_1:67281995-67282014 | None:intergenic | 30.0% |
| CAAAATAACAGAGAAAGTAG+AGG | - | chr4_1:67281997-67282016 | Msa0566240:intron | 30.0% | |
| AGGAAACAAACAAAAAACAG+AGG | - | chr4_1:67282028-67282047 | Msa0566240:intron | 30.0% | |
| TAATAAACTCCCTGATATGA+AGG | + | chr4_1:67282298-67282317 | None:intergenic | 30.0% | |
| GGAACTTTCTATATCCAATT+AGG | - | chr4_1:67282343-67282362 | Msa0566240:intron | 30.0% | |
| TTCTAAATTACAGCCCTAAT+TGG | + | chr4_1:67282360-67282379 | None:intergenic | 30.0% | |
| !! | ACAGTTTTCCTCATTTTTCT+AGG | - | chr4_1:67282577-67282596 | Msa0566240:intron | 30.0% |
| AAATGTATAGATATAGGCAC+TGG | + | chr4_1:67282634-67282653 | None:intergenic | 30.0% | |
| ! | ACTTCTGAAAAAGTCAATTC+TGG | - | chr4_1:67282736-67282755 | Msa0566240:intron | 30.0% |
| TATGCTTAGTAATCTTGTAG+GGG | + | chr4_1:67282808-67282827 | None:intergenic | 30.0% | |
| ! | TAATTATTACGGGCTATTTC+TGG | - | chr4_1:67283375-67283394 | Msa0566240:intron | 30.0% |
| !! | AATTATTACGGGCTATTTCT+GGG | - | chr4_1:67283376-67283395 | Msa0566240:intron | 30.0% |
| AAGAAGAAAGAAATTGTCGT+GGG | - | chr4_1:67283402-67283421 | Msa0566240:intron | 30.0% | |
| TCTTTCTACTTGAAATCGAT+TGG | + | chr4_1:67283571-67283590 | None:intergenic | 30.0% | |
| GAACTCAATTTCTCTAAACA+AGG | - | chr4_1:67283959-67283978 | Msa0566240:intron | 30.0% | |
| ! | TATTTTATGCAGATTGGTAG+AGG | + | chr4_1:67284005-67284024 | None:intergenic | 30.0% |
| !! | ATTTTCTCAGGTTGTTACAA+AGG | - | chr4_1:67284056-67284075 | Msa0566240:intron | 30.0% |
| GTCTTCTTTGGTTGAAAATA+TGG | - | chr4_1:67284247-67284266 | Msa0566240:intron | 30.0% | |
| ! | ATGGTTTTTGCAAATTTTGC+AGG | - | chr4_1:67284573-67284592 | Msa0566240:intron | 30.0% |
| ! | TTTTTGCAAATTTTGCAGGT+TGG | - | chr4_1:67284577-67284596 | Msa0566240:intron | 30.0% |
| ! | TTTTGCAAATTTTGCAGGTT+GGG | - | chr4_1:67284578-67284597 | Msa0566240:intron | 30.0% |
| TACATGGCACATAAGTTTAA+CGG | + | chr4_1:67284937-67284956 | None:intergenic | 30.0% | |
| AAGAACAACATGATACTACA+TGG | + | chr4_1:67284953-67284972 | None:intergenic | 30.0% | |
| ! | TCTCTCTCCTTGTTCTAAAT+TGG | - | chr4_1:67277862-67277881 | Msa0566240:three_prime_UTR | 35.0% |
| ! | TCTCCTTGTTCTAAATTGGA+TGG | - | chr4_1:67277866-67277885 | Msa0566240:three_prime_UTR | 35.0% |
| TAGTGACAGTGTTGTCATTA+CGG | + | chr4_1:67277966-67277985 | None:intergenic | 35.0% | |
| ! | TTTCGAAGTTTGAAGCAAGA+TGG | + | chr4_1:67277989-67278008 | None:intergenic | 35.0% |
| TTGAGAGTAAACAAGGTTTG+GGG | + | chr4_1:67278039-67278058 | None:intergenic | 35.0% | |
| GTTTGAGAGTAAACAAGGTT+TGG | + | chr4_1:67278041-67278060 | None:intergenic | 35.0% | |
| TGGAAATTACCAAGAAGTCA+TGG | + | chr4_1:67278153-67278172 | None:intergenic | 35.0% | |
| AACACTTGAGGTCAATTACT+TGG | + | chr4_1:67278494-67278513 | None:intergenic | 35.0% | |
| ACCTCAAGTGTTAATGAATC+TGG | - | chr4_1:67278502-67278521 | Msa0566240:intron | 35.0% | |
| TCCAGATTCATTAACACTTG+AGG | + | chr4_1:67278506-67278525 | None:intergenic | 35.0% | |
| TACTAAAATGGCTGTGAGAT+AGG | - | chr4_1:67278663-67278682 | Msa0566240:intron | 35.0% | |
| ! | TATTTTCATAAGCTCCTCGT+AGG | - | chr4_1:67278726-67278745 | Msa0566240:CDS | 35.0% |
| ATATGATTATGATGCCTACG+AGG | + | chr4_1:67278743-67278762 | None:intergenic | 35.0% | |
| GAAAAAATTACACCGGTACA+AGG | - | chr4_1:67278917-67278936 | Msa0566240:CDS | 35.0% | |
| GCTCTCGAGAAATATCATTT+GGG | + | chr4_1:67279084-67279103 | None:intergenic | 35.0% | |
| TGCTCTCGAGAAATATCATT+TGG | + | chr4_1:67279085-67279104 | None:intergenic | 35.0% | |
| TTTGCACGAACATCTTCATT+TGG | - | chr4_1:67279328-67279347 | Msa0566240:intron | 35.0% | |
| !! | TTACATGACTTTAATGGGCT+TGG | - | chr4_1:67279512-67279531 | Msa0566240:intron | 35.0% |
| !! | TACATGACTTTAATGGGCTT+GGG | - | chr4_1:67279513-67279532 | Msa0566240:intron | 35.0% |
| ATAAGAGCAATGCATTCACA+AGG | - | chr4_1:67279814-67279833 | Msa0566240:intron | 35.0% | |
| TCCATACAGTGTAAGCAATT+GGG | - | chr4_1:67279889-67279908 | Msa0566240:intron | 35.0% | |
| ATCTCTAACTGAAATCCCTA+GGG | - | chr4_1:67280170-67280189 | Msa0566240:intron | 35.0% | |
| ATATCTATAGTTCGAGCTGT+TGG | + | chr4_1:67280218-67280237 | None:intergenic | 35.0% | |
| ! | GCAAACGAGCTTATTTGTTT+TGG | - | chr4_1:67280617-67280636 | Msa0566240:intron | 35.0% |
| !! | GTATCTTACTTGGCTACTTT+TGG | + | chr4_1:67280649-67280668 | None:intergenic | 35.0% |
| TTGAACGTAGGTGATCTTAT+TGG | - | chr4_1:67280746-67280765 | Msa0566240:intron | 35.0% | |
| TTATGTAAGCTTCACCTTAC+TGG | - | chr4_1:67280796-67280815 | Msa0566240:intron | 35.0% | |
| TCTCTCGTACAAGATATATC+TGG | - | chr4_1:67280869-67280888 | Msa0566240:intron | 35.0% | |
| GATACTTCCCTAAGTAAGAA+AGG | - | chr4_1:67281022-67281041 | Msa0566240:intron | 35.0% | |
| ATCCATGCCTTTCTTACTTA+GGG | + | chr4_1:67281032-67281051 | None:intergenic | 35.0% | |
| TATCCATGCCTTTCTTACTT+AGG | + | chr4_1:67281033-67281052 | None:intergenic | 35.0% | |
| TATGTAAAAGAGGTAGCCAT+AGG | + | chr4_1:67281110-67281129 | None:intergenic | 35.0% | |
| GATAAGCAGCCTATAACTAT+AGG | - | chr4_1:67281305-67281324 | Msa0566240:intron | 35.0% | |
| ! | GGAAATATCATTTCTGAAGG+TGG | - | chr4_1:67281332-67281351 | Msa0566240:intron | 35.0% |
| AATAAGTTGCGAGTTATCCA+AGG | - | chr4_1:67281446-67281465 | Msa0566240:CDS | 35.0% | |
| AGAGTGGTTAAAAAGATCGT+GGG | + | chr4_1:67281746-67281765 | None:intergenic | 35.0% | |
| AAGAGTGGTTAAAAAGATCG+TGG | + | chr4_1:67281747-67281766 | None:intergenic | 35.0% | |
| AAAGAGAGGGAATGAGAAAT+GGG | + | chr4_1:67281777-67281796 | None:intergenic | 35.0% | |
| TAAAGAGAGGGAATGAGAAA+TGG | + | chr4_1:67281778-67281797 | None:intergenic | 35.0% | |
| ! | TTGGGAGGGAAATTTTGTTA+TGG | + | chr4_1:67281815-67281834 | None:intergenic | 35.0% |
| !!! | TCAGGTTCAGGTTTTTAAGT+AGG | - | chr4_1:67281859-67281878 | Msa0566240:intron | 35.0% |
| GTGAAAGATCGTAAAAACGA+GGG | - | chr4_1:67281894-67281913 | Msa0566240:intron | 35.0% | |
| AGAAAGTAGAGGAAAAACAG+AGG | - | chr4_1:67282008-67282027 | Msa0566240:intron | 35.0% | |
| AAGAAAAACAGAGCAAACAG+AGG | - | chr4_1:67282068-67282087 | Msa0566240:CDS | 35.0% | |
| AATGTGTAACAGAATGGACA+TGG | + | chr4_1:67282229-67282248 | None:intergenic | 35.0% | |
| ATGTCCATTCTGTTACACAT+TGG | - | chr4_1:67282228-67282247 | Msa0566240:CDS | 35.0% | |
| CGGTTTATTGAAATCGATAC+AGG | + | chr4_1:67282481-67282500 | None:intergenic | 35.0% | |
| TAACAACGTAAAACGGAACA+TGG | + | chr4_1:67282524-67282543 | None:intergenic | 35.0% | |
| ! | TATTTTATTCAAGCCACAGC+AGG | - | chr4_1:67282603-67282622 | Msa0566240:intron | 35.0% |
| TCTTAAACAGAAGCCAAGTT+CGG | + | chr4_1:67282766-67282785 | None:intergenic | 35.0% | |
| AGAGATGAGAGGAATAAAAG+AGG | - | chr4_1:67282975-67282994 | Msa0566240:intron | 35.0% | |
| GACCGTTGGATTAAAATGTA+CGG | - | chr4_1:67282997-67283016 | Msa0566240:intron | 35.0% | |
| !! | CACCGTACATTTTAATCCAA+CGG | + | chr4_1:67283002-67283021 | None:intergenic | 35.0% |
| TTTGTGAGAAAATACAGGGA+AGG | + | chr4_1:67283129-67283148 | None:intergenic | 35.0% | |
| !! | TTTTGATTCAACTCCAGATC+TGG | - | chr4_1:67283226-67283245 | Msa0566240:intron | 35.0% |
| ACATTTGAGGATGAACGATA+GGG | + | chr4_1:67283260-67283279 | None:intergenic | 35.0% | |
| CAAGAAGAAAGAAATTGTCG+TGG | - | chr4_1:67283401-67283420 | Msa0566240:intron | 35.0% | |
| AATTGTCGTGGGTAATGAAA+CGG | - | chr4_1:67283413-67283432 | Msa0566240:intron | 35.0% | |
| GTAGAAAGATAGATGTGTAG+TGG | - | chr4_1:67283582-67283601 | Msa0566240:intron | 35.0% | |
| ATAAGAACGCGAGAGAAATA+AGG | - | chr4_1:67283640-67283659 | Msa0566240:CDS | 35.0% | |
| TAAGAACGCGAGAGAAATAA+GGG | - | chr4_1:67283641-67283660 | Msa0566240:CDS | 35.0% | |
| ! | TTTTATTGTGAGAGGTGAGA+GGG | + | chr4_1:67283746-67283765 | None:intergenic | 35.0% |
| TGATTGTATCTTGACTTCTC+AGG | - | chr4_1:67283876-67283895 | Msa0566240:intron | 35.0% | |
| AGAAATTGAGTTCCATAGAC+AGG | + | chr4_1:67283952-67283971 | None:intergenic | 35.0% | |
| !! | ATCAGAATGGACTAAGTATC+AGG | + | chr4_1:67284038-67284057 | None:intergenic | 35.0% |
| ! | TAGTCCATTCTGATTTTCTC+AGG | - | chr4_1:67284044-67284063 | Msa0566240:intron | 35.0% |
| ACAACCTGAGAAAATCAGAA+TGG | + | chr4_1:67284051-67284070 | None:intergenic | 35.0% | |
| TATCACTGTGGATGGAAAAA+AGG | - | chr4_1:67284172-67284191 | Msa0566240:intron | 35.0% | |
| ! | TTATAACTGCAGTTTTCGCA+AGG | + | chr4_1:67284307-67284326 | None:intergenic | 35.0% |
| ATCGGTTGGCAGAAAATTAA+TGG | - | chr4_1:67284554-67284573 | Msa0566240:intron | 35.0% | |
| ! | AAATTGACTAGTTACACCTC+TGG | - | chr4_1:67284601-67284620 | Msa0566240:intron | 35.0% |
| ATTGTTGGAGACAACATCAT+TGG | - | chr4_1:67284694-67284713 | Msa0566240:intron | 35.0% | |
| ! | CAAGATTTTGAACTACCAGA+TGG | + | chr4_1:67284760-67284779 | None:intergenic | 35.0% |
| CAGTGTTGTCATTACGGATT+AGG | + | chr4_1:67277960-67277979 | None:intergenic | 40.0% | |
| TCAAACTTCGAAACCAACCA+TGG | - | chr4_1:67277996-67278015 | Msa0566240:three_prime_UTR | 40.0% | |
| AATAGAGAAGATGGAGACCA+TGG | + | chr4_1:67278016-67278035 | None:intergenic | 40.0% | |
| CTGAGGTTTGAGAGTAAACA+AGG | + | chr4_1:67278046-67278065 | None:intergenic | 40.0% | |
| GATTCTTGTTCTTGTTGCGT+TGG | + | chr4_1:67278081-67278100 | None:intergenic | 40.0% | |
| CCCTGTCAATGAAAATAGGA+GGG | + | chr4_1:67278557-67278576 | None:intergenic | 40.0% | |
| ! | CCCTCCTATTTTCATTGACA+GGG | - | chr4_1:67278554-67278573 | Msa0566240:intron | 40.0% |
| TCCCTGTCAATGAAAATAGG+AGG | + | chr4_1:67278558-67278577 | None:intergenic | 40.0% | |
| ! | TCATAACGATGAAGAAGCAC+TGG | - | chr4_1:67279223-67279242 | Msa0566240:intron | 40.0% |
| GAGAACATGCATTTAGCTAC+AGG | + | chr4_1:67279302-67279321 | None:intergenic | 40.0% | |
| GTTGTGGATCTTTCACACTT+CGG | - | chr4_1:67279747-67279766 | Msa0566240:intron | 40.0% | |
| TGCATTGCTCTTATGTGGAA+AGG | + | chr4_1:67279808-67279827 | None:intergenic | 40.0% | |
| GTGAATGCATTGCTCTTATG+TGG | + | chr4_1:67279813-67279832 | None:intergenic | 40.0% | |
| GTCCATACAGTGTAAGCAAT+TGG | - | chr4_1:67279888-67279907 | Msa0566240:intron | 40.0% | |
| TCCCAATTGCTTACACTGTA+TGG | + | chr4_1:67279893-67279912 | None:intergenic | 40.0% | |
| !! | CAGAGTACTGCAAACTTTGA+GGG | - | chr4_1:67280019-67280038 | Msa0566240:intron | 40.0% |
| GATCTCTAACTGAAATCCCT+AGG | - | chr4_1:67280169-67280188 | Msa0566240:intron | 40.0% | |
| AAAACAGTGTCACATCCCTA+GGG | + | chr4_1:67280188-67280207 | None:intergenic | 40.0% | |
| AAAAACAGTGTCACATCCCT+AGG | + | chr4_1:67280189-67280208 | None:intergenic | 40.0% | |
| CTATAGATATTGCACATGCG+TGG | - | chr4_1:67280228-67280247 | Msa0566240:intron | 40.0% | |
| CTTGTTCAGCATTTCGGTAA+TGG | + | chr4_1:67280413-67280432 | None:intergenic | 40.0% | |
| TTACTGTTAGGATTCTCCGA+CGG | - | chr4_1:67280450-67280469 | Msa0566240:intron | 40.0% | |
| ! | ATTTTCGGTTTAACCTCCGT+CGG | + | chr4_1:67280469-67280488 | None:intergenic | 40.0% |
| !!! | ACGAGCTTATTTGTTTTGGC+AGG | - | chr4_1:67280621-67280640 | Msa0566240:intron | 40.0% |
| AGTTGTGAGAATGACAGAGT+CGG | - | chr4_1:67280684-67280703 | Msa0566240:intron | 40.0% | |
| ATGACACGATTGAGCATGTA+AGG | + | chr4_1:67280967-67280986 | None:intergenic | 40.0% | |
| TTCCCTAAGTAAGAAAGGCA+TGG | - | chr4_1:67281027-67281046 | Msa0566240:intron | 40.0% | |
| !! | TTTGCTTTTGGCAACGCTTT+TGG | - | chr4_1:67281067-67281086 | Msa0566240:intron | 40.0% |
| AGAGGTAGCCATAGGATAAT+AGG | + | chr4_1:67281102-67281121 | None:intergenic | 40.0% | |
| CAGCCTATAACTATAGGAGT+TGG | - | chr4_1:67281311-67281330 | Msa0566240:intron | 40.0% | |
| AGAATAGCTTTCCAGACAGA+TGG | + | chr4_1:67281389-67281408 | None:intergenic | 40.0% | |
| TGGAAAGCTATTCTTGCTCA+AGG | - | chr4_1:67281395-67281414 | Msa0566240:CDS | 40.0% | |
| GGAAAGCTATTCTTGCTCAA+GGG | - | chr4_1:67281396-67281415 | Msa0566240:CDS | 40.0% | |
| GAAAGCTATTCTTGCTCAAG+GGG | - | chr4_1:67281397-67281416 | Msa0566240:CDS | 40.0% | |
| ! | TTGCAATGGGTTCTAATGCT+TGG | - | chr4_1:67281423-67281442 | Msa0566240:CDS | 40.0% |
| CATTCAGAACAAGATATCCC+TGG | - | chr4_1:67281698-67281717 | Msa0566240:intron | 40.0% | |
| AAGAGAGGGAATGAGAAATG+GGG | + | chr4_1:67281776-67281795 | None:intergenic | 40.0% | |
| AAACCTGAACCTGACTACAT+TGG | + | chr4_1:67281853-67281872 | None:intergenic | 40.0% | |
| !!! | GGTTTTTAAGTAGGATCGGT+AGG | - | chr4_1:67281868-67281887 | Msa0566240:intron | 40.0% |
| GGTGAAAGATCGTAAAAACG+AGG | - | chr4_1:67281893-67281912 | Msa0566240:intron | 40.0% | |
| ATCGTGCTTCAACTTTACTC+AGG | + | chr4_1:67282113-67282132 | None:intergenic | 40.0% | |
| GTAAAGTTGAAGCACGATTG+AGG | - | chr4_1:67282115-67282134 | Msa0566240:intron | 40.0% | |
| GGTTCCAATGTGTAACAGAA+TGG | + | chr4_1:67282235-67282254 | None:intergenic | 40.0% | |
| AGAAGGGATGTATAGGATCA+GGG | + | chr4_1:67282257-67282276 | None:intergenic | 40.0% | |
| GGGCTGTAATTTAGAAGTCT+TGG | - | chr4_1:67282364-67282383 | Msa0566240:intron | 40.0% | |
| ! | GTATGTGTTTTCAAAGGCTC+TGG | - | chr4_1:67282417-67282436 | Msa0566240:intron | 40.0% |
| GAAATCGATACAGGCCTATA+GGG | + | chr4_1:67282472-67282491 | None:intergenic | 40.0% | |
| TGAAATCGATACAGGCCTAT+AGG | + | chr4_1:67282473-67282492 | None:intergenic | 40.0% | |
| ! | AGATGTGGAGAAACTTTTGC+CGG | + | chr4_1:67282554-67282573 | None:intergenic | 40.0% |
| CTAGCACTAAAAGCCTTCAT+GGG | + | chr4_1:67282678-67282697 | None:intergenic | 40.0% | |
| TCTAGCACTAAAAGCCTTCA+TGG | + | chr4_1:67282679-67282698 | None:intergenic | 40.0% | |
| !!! | TAGGGTTTTTTAGCCAGATC+TGG | + | chr4_1:67283242-67283261 | None:intergenic | 40.0% |
| CACATTTGAGGATGAACGAT+AGG | + | chr4_1:67283261-67283280 | None:intergenic | 40.0% | |
| GAAAGATAGATGTGTAGTGG+AGG | - | chr4_1:67283585-67283604 | Msa0566240:intron | 40.0% | |
| AAGAACGCGAGAGAAATAAG+GGG | - | chr4_1:67283642-67283661 | Msa0566240:CDS | 40.0% | |
| TTTATTGTGAGAGGTGAGAG+GGG | + | chr4_1:67283745-67283764 | None:intergenic | 40.0% | |
| ! | CTTTTATTGTGAGAGGTGAG+AGG | + | chr4_1:67283747-67283766 | None:intergenic | 40.0% |
| !!! | GAGAGTGCTTTTATTGTGAG+AGG | + | chr4_1:67283754-67283773 | None:intergenic | 40.0% |
| TGTATCTTGACTTCTCAGGA+AGG | - | chr4_1:67283880-67283899 | Msa0566240:intron | 40.0% | |
| !! | AATGGACTAAGTATCAGGCA+AGG | + | chr4_1:67284033-67284052 | None:intergenic | 40.0% |
| TCCATCATATGTTATGAGCC+TGG | + | chr4_1:67284096-67284115 | None:intergenic | 40.0% | |
| ! | CATATGATGGAGTCAAACAG+AGG | - | chr4_1:67284105-67284124 | Msa0566240:intron | 40.0% |
| ATGGAGTCAAACAGAGGTTA+TGG | - | chr4_1:67284111-67284130 | Msa0566240:intron | 40.0% | |
| TGGAGTCAAACAGAGGTTAT+GGG | - | chr4_1:67284112-67284131 | Msa0566240:intron | 40.0% | |
| GATAATACTACCAGGTTCTG+CGG | + | chr4_1:67284156-67284175 | None:intergenic | 40.0% | |
| ACCTGGTAGTATTATCACTG+TGG | - | chr4_1:67284160-67284179 | Msa0566240:intron | 40.0% | |
| TCCACAGTGATAATACTACC+AGG | + | chr4_1:67284164-67284183 | None:intergenic | 40.0% | |
| GGTAGTATTATCACTGTGGA+TGG | - | chr4_1:67284164-67284183 | Msa0566240:intron | 40.0% | |
| TCGCAAGGTATGGTTCAATT+GGG | + | chr4_1:67284292-67284311 | None:intergenic | 40.0% | |
| TTCGCAAGGTATGGTTCAAT+TGG | + | chr4_1:67284293-67284312 | None:intergenic | 40.0% | |
| !! | TGCTGACTCATTGTACAAGA+TGG | + | chr4_1:67284483-67284502 | None:intergenic | 40.0% |
| AGGGAACTGTAGGATTACAA+AGG | + | chr4_1:67284529-67284548 | None:intergenic | 40.0% | |
| ! | TCGGATTAGGTTACATCAAG+AGG | - | chr4_1:67284644-67284663 | Msa0566240:intron | 40.0% |
| GAAGGAGACAGTGTAATTGT+TGG | - | chr4_1:67284679-67284698 | Msa0566240:intron | 40.0% | |
| ! | GATTTTGAACTACCAGATGG+CGG | + | chr4_1:67284757-67284776 | None:intergenic | 40.0% |
| GGTTTGGGGAATAGAGAAGA+TGG | + | chr4_1:67278025-67278044 | None:intergenic | 45.0% | |
| ACCAAGAAGTCATGGTCGAT+GGG | + | chr4_1:67278145-67278164 | None:intergenic | 45.0% | |
| TACCAAGAAGTCATGGTCGA+TGG | + | chr4_1:67278146-67278165 | None:intergenic | 45.0% | |
| ! | GCCCTCCTATTTTCATTGAC+AGG | - | chr4_1:67278553-67278572 | Msa0566240:intron | 45.0% |
| !! | CCATTTTAGTAGCTGAGGTG+GGG | + | chr4_1:67278654-67278673 | None:intergenic | 45.0% |
| !! | GCCATTTTAGTAGCTGAGGT+GGG | + | chr4_1:67278655-67278674 | None:intergenic | 45.0% |
| !! | AGCCATTTTAGTAGCTGAGG+TGG | + | chr4_1:67278656-67278675 | None:intergenic | 45.0% |
| !! | CACAGCCATTTTAGTAGCTG+AGG | + | chr4_1:67278659-67278678 | None:intergenic | 45.0% |
| AGGATCGAGAACCTACACTA+TGG | - | chr4_1:67278766-67278785 | Msa0566240:CDS | 45.0% | |
| ACAGTGTCCTGCAACAGTAA+AGG | + | chr4_1:67279155-67279174 | None:intergenic | 45.0% | |
| TACAACAACCCCATTGTCTG+CGG | + | chr4_1:67279252-67279271 | None:intergenic | 45.0% | |
| GCTTGGGATGATATTAGCTC+AGG | - | chr4_1:67279529-67279548 | Msa0566240:intron | 45.0% | |
| TTGCAGTACTCTGGTTGTGA+AGG | + | chr4_1:67280012-67280031 | None:intergenic | 45.0% | |
| CCTCAAAGTTTGCAGTACTC+TGG | + | chr4_1:67280021-67280040 | None:intergenic | 45.0% | |
| !! | CCAGAGTACTGCAAACTTTG+AGG | - | chr4_1:67280018-67280037 | Msa0566240:intron | 45.0% |
| ! | TGCAAACTTTGAGGGTCTAC+AGG | - | chr4_1:67280027-67280046 | Msa0566240:intron | 45.0% |
| TATTGCACATGCGTGGATCA+TGG | - | chr4_1:67280235-67280254 | Msa0566240:intron | 45.0% | |
| TGGTTTCAGCAGAGACTTGT+AGG | - | chr4_1:67280386-67280405 | Msa0566240:intron | 45.0% | |
| ! | GTGATGGAAAGCTTGAACGT+AGG | - | chr4_1:67280734-67280753 | Msa0566240:intron | 45.0% |
| !! | AGATATCCCTGGCTTTTGAG+AGG | - | chr4_1:67281709-67281728 | Msa0566240:intron | 45.0% |
| ACAATGCCTCTCAAAAGCCA+GGG | + | chr4_1:67281718-67281737 | None:intergenic | 45.0% | |
| TACAATGCCTCTCAAAAGCC+AGG | + | chr4_1:67281719-67281738 | None:intergenic | 45.0% | |
| GAAATGGGGAAGGAAAAGAG+TGG | + | chr4_1:67281762-67281781 | None:intergenic | 45.0% | |
| TGGTGGCAAACAGAGGATTT+GGG | + | chr4_1:67281833-67281852 | None:intergenic | 45.0% | |
| ! | TTGGTGGCAAACAGAGGATT+TGG | + | chr4_1:67281834-67281853 | None:intergenic | 45.0% |
| ! | ACTACATTGGTGGCAAACAG+AGG | + | chr4_1:67281840-67281859 | None:intergenic | 45.0% |
| TGTTTGCCACCAATGTAGTC+AGG | - | chr4_1:67281841-67281860 | Msa0566240:intron | 45.0% | |
| TTTAAGTAGGATCGGTAGGC+TGG | - | chr4_1:67281872-67281891 | Msa0566240:intron | 45.0% | |
| TCGTAGCACGATTCGTAAGT+AGG | - | chr4_1:67281917-67281936 | Msa0566240:intron | 45.0% | |
| GCACGATTCGTAAGTAGGAT+CGG | - | chr4_1:67281922-67281941 | Msa0566240:intron | 45.0% | |
| GATTCGTAAGTAGGATCGGT+AGG | - | chr4_1:67281926-67281945 | Msa0566240:intron | 45.0% | |
| GAAGGGATGTATAGGATCAG+GGG | + | chr4_1:67282256-67282275 | None:intergenic | 45.0% | |
| CAGAAGGGATGTATAGGATC+AGG | + | chr4_1:67282258-67282277 | None:intergenic | 45.0% | |
| GGAGAACAGAAGGGATGTAT+AGG | + | chr4_1:67282264-67282283 | None:intergenic | 45.0% | |
| !! | ATAGGGAGATGGGTTGGAAA+CGG | + | chr4_1:67282455-67282474 | None:intergenic | 45.0% |
| TTTCCAACCCATCTCCCTAT+AGG | - | chr4_1:67282455-67282474 | Msa0566240:CDS | 45.0% | |
| ATACAGGCCTATAGGGAGAT+GGG | + | chr4_1:67282465-67282484 | None:intergenic | 45.0% | |
| CCGAGATAGTTTGGAGGTTA+CGG | + | chr4_1:67282501-67282520 | None:intergenic | 45.0% | |
| CCGTAACCTCCAAACTATCT+CGG | - | chr4_1:67282498-67282517 | Msa0566240:intron | 45.0% | |
| GAGGAAAACTGTCACAGATG+TGG | + | chr4_1:67282569-67282588 | None:intergenic | 45.0% | |
| GAAATGTGTCTAGCCCATGA+AGG | - | chr4_1:67282662-67282681 | Msa0566240:intron | 45.0% | |
| TTGTAGGGGAATACGAACAC+TGG | + | chr4_1:67282794-67282813 | None:intergenic | 45.0% | |
| GAGGAATAAAAGAGGACCGT+TGG | - | chr4_1:67282983-67283002 | Msa0566240:intron | 45.0% | |
| CGAGAGAAATAAGGGGATGA+AGG | - | chr4_1:67283649-67283668 | Msa0566240:CDS | 45.0% | |
| CACAAACGAATTCAACGTCC+TGG | - | chr4_1:67283923-67283942 | Msa0566240:intron | 45.0% | |
| AAACGAATTCAACGTCCTGG+AGG | - | chr4_1:67283926-67283945 | Msa0566240:intron | 45.0% | |
| ! | CTCAGGTTGTTACAAAGGAC+AGG | - | chr4_1:67284061-67284080 | Msa0566240:intron | 45.0% |
| GCCAGGCTCATAACATATGA+TGG | - | chr4_1:67284092-67284111 | Msa0566240:intron | 45.0% | |
| GGAGTCAAACAGAGGTTATG+GGG | - | chr4_1:67284113-67284132 | Msa0566240:intron | 45.0% | |
| ! | ACTGCAGTTTTCGCAAGGTA+TGG | + | chr4_1:67284302-67284321 | None:intergenic | 45.0% |
| CCTACAGTTCCCTCTTGAAT+CGG | - | chr4_1:67284536-67284555 | Msa0566240:intron | 45.0% | |
| ! | TTCTGCCAACCGATTCAAGA+GGG | + | chr4_1:67284548-67284567 | None:intergenic | 45.0% |
| ! | TTTCTGCCAACCGATTCAAG+AGG | + | chr4_1:67284549-67284568 | None:intergenic | 45.0% |
| ! | TGACTAGTTACACCTCTGGA+AGG | - | chr4_1:67284605-67284624 | Msa0566240:intron | 45.0% |
| GGACGCTGTTGAGAAAGAAA+AGG | + | chr4_1:67284736-67284755 | None:intergenic | 45.0% | |
| !!! | TATTTAAATTTAAAAGTTTT+GGG | + | chr4_1:67279848-67279867 | None:intergenic | 5.0% |
| !!! | ATATTTAAATTTAAAAGTTT+TGG | + | chr4_1:67279849-67279868 | None:intergenic | 5.0% |
| !! | AAAAATGTAAAAATTAATTA+AGG | - | chr4_1:67283499-67283518 | Msa0566240:intron | 5.0% |
| !!! | TATTTAATTTTTATTAATGT+AGG | + | chr4_1:67283688-67283707 | None:intergenic | 5.0% |
| !! | TATATATATATATATATAGA+GGG | + | chr4_1:67283787-67283806 | None:intergenic | 5.0% |
| !! | ATATATATATATATATATAG+AGG | + | chr4_1:67283838-67283857 | None:intergenic | 5.0% |
| ! | GCACACGCTCTTTTTCTGTG+TGG | + | chr4_1:67277908-67277927 | None:intergenic | 50.0% |
| GAGAAGATGGAGACCATGGT+TGG | + | chr4_1:67278012-67278031 | None:intergenic | 50.0% | |
| ! | GTTGGTGAGAGCAGAATCTG+AGG | + | chr4_1:67278063-67278082 | None:intergenic | 50.0% |
| AGGGGAAAGGTCGAAAGATG+AGG | + | chr4_1:67278119-67278138 | None:intergenic | 50.0% | |
| AAGAAGTCATGGTCGATGGG+TGG | + | chr4_1:67278142-67278161 | None:intergenic | 50.0% | |
| ACCCATCGACCATGACTTCT+TGG | - | chr4_1:67278141-67278160 | Msa0566240:CDS | 50.0% | |
| ! | TTTTAGTAGCTGAGGTGGGG+AGG | + | chr4_1:67278651-67278670 | None:intergenic | 50.0% |
| CCCCACCTCAGCTACTAAAA+TGG | - | chr4_1:67278651-67278670 | Msa0566240:intron | 50.0% | |
| CAGGACACTGTCAAAACTGC+AGG | - | chr4_1:67279164-67279183 | Msa0566240:intron | 50.0% | |
| TGGATCTTTCACACTTCGGC+CGG | - | chr4_1:67279751-67279770 | Msa0566240:intron | 50.0% | |
| ! | AACTTTGAGGGTCTACAGGC+AGG | - | chr4_1:67280031-67280050 | Msa0566240:intron | 50.0% |
| ! | ACTTTGAGGGTCTACAGGCA+GGG | - | chr4_1:67280032-67280051 | Msa0566240:intron | 50.0% |
| GAGGGAATGAGAAATGGGGA+AGG | + | chr4_1:67281772-67281791 | None:intergenic | 50.0% | |
| GGCAAACAGAGGATTTGGGA+GGG | + | chr4_1:67281829-67281848 | None:intergenic | 50.0% | |
| TGGCAAACAGAGGATTTGGG+AGG | + | chr4_1:67281830-67281849 | None:intergenic | 50.0% | |
| CCTGAACCTGACTACATTGG+TGG | + | chr4_1:67281850-67281869 | None:intergenic | 50.0% | |
| CCACCAATGTAGTCAGGTTC+AGG | - | chr4_1:67281847-67281866 | Msa0566240:intron | 50.0% | |
| ! | AAGCACGATTGAGGTGCCTT+GGG | - | chr4_1:67282124-67282143 | Msa0566240:intron | 50.0% |
| ! | ATTGAGGTGCCTTGGGATGT+AGG | - | chr4_1:67282131-67282150 | Msa0566240:intron | 50.0% |
| TCGTTCGATCCTACATCCCA+AGG | + | chr4_1:67282143-67282162 | None:intergenic | 50.0% | |
| !! | AGGATCGAGTGCTGGTTTGT+AGG | + | chr4_1:67282167-67282186 | None:intergenic | 50.0% |
| TTGTAGTCAGGATCGAGTGC+TGG | + | chr4_1:67282175-67282194 | None:intergenic | 50.0% | |
| GCGTCGCAATCATTGTAGTC+AGG | + | chr4_1:67282187-67282206 | None:intergenic | 50.0% | |
| TAGCGCGCACCTTCATATCA+GGG | - | chr4_1:67282286-67282305 | Msa0566240:intron | 50.0% | |
| GATACAGGCCTATAGGGAGA+TGG | + | chr4_1:67282466-67282485 | None:intergenic | 50.0% | |
| ACATGGCCGAGATAGTTTGG+AGG | + | chr4_1:67282507-67282526 | None:intergenic | 50.0% | |
| GGAACATGGCCGAGATAGTT+TGG | + | chr4_1:67282510-67282529 | None:intergenic | 50.0% | |
| !! | CAATTCTGGAGTGCCGAACT+TGG | - | chr4_1:67282750-67282769 | Msa0566240:intron | 50.0% |
| AAGCAAGAGCTGGGGATGAA+GGG | + | chr4_1:67283078-67283097 | None:intergenic | 50.0% | |
| TTCTCTCTGGCAACGCTCTA+TGG | - | chr4_1:67283096-67283115 | Msa0566240:CDS | 50.0% | |
| TCTCTCTGGCAACGCTCTAT+GGG | - | chr4_1:67283097-67283116 | Msa0566240:intron | 50.0% | |
| TGTCGTGGGTAATGAAACGG+TGG | - | chr4_1:67283416-67283435 | Msa0566240:intron | 50.0% | |
| !! | GATGTGTAGTGGAGGCATCA+TGG | - | chr4_1:67283593-67283612 | Msa0566240:intron | 50.0% |
| GAGGGGTAAATCACAGCCTT+TGG | + | chr4_1:67283728-67283747 | None:intergenic | 50.0% | |
| TCGTTTGTGAGCTCCATTCC+AGG | + | chr4_1:67283912-67283931 | None:intergenic | 50.0% | |
| AAGGACAGGAGACTATAGCC+AGG | - | chr4_1:67284075-67284094 | Msa0566240:intron | 50.0% | |
| ACAATGAGTCAGCACGCTAG+TGG | - | chr4_1:67284489-67284508 | Msa0566240:intron | 50.0% | |
| CCGATTCAAGAGGGAACTGT+AGG | + | chr4_1:67284539-67284558 | None:intergenic | 50.0% | |
| CAGTTCCCTCTTGAATCGGT+TGG | - | chr4_1:67284540-67284559 | Msa0566240:intron | 50.0% | |
| AGGAAGCCATCGGAACACTT+CGG | - | chr4_1:67284625-67284644 | Msa0566240:intron | 50.0% | |
| ! | CCTAATCCGAAGTGTTCCGA+TGG | + | chr4_1:67284634-67284653 | None:intergenic | 50.0% |
| CCATCGGAACACTTCGGATT+AGG | - | chr4_1:67284631-67284650 | Msa0566240:intron | 50.0% | |
| AAGAGGCAAGCTGCTTCAGA+AGG | - | chr4_1:67284661-67284680 | Msa0566240:intron | 50.0% | |
| AGTCATGGTCGATGGGTGGA+GGG | + | chr4_1:67278138-67278157 | None:intergenic | 55.0% | |
| AAGTCATGGTCGATGGGTGG+AGG | + | chr4_1:67278139-67278158 | None:intergenic | 55.0% | |
| ! | TGTCAAAACTGCAGGTGCCG+AGG | - | chr4_1:67279172-67279191 | Msa0566240:intron | 55.0% |
| GATCCCTTCCCCAGAAACCT+CGG | + | chr4_1:67279192-67279211 | None:intergenic | 55.0% | |
| TCACACTTCGGCCGGATAAG+AGG | - | chr4_1:67279759-67279778 | Msa0566240:intron | 55.0% | |
| CTACAGGCAGGGCAAGTATG+TGG | - | chr4_1:67280043-67280062 | Msa0566240:intron | 55.0% | |
| CTGTTAGGATTCTCCGACGG+AGG | - | chr4_1:67280453-67280472 | Msa0566240:intron | 55.0% | |
| TGCTCAAGGGGCTGTTGCAA+TGG | - | chr4_1:67281409-67281428 | Msa0566240:CDS | 55.0% | |
| GCTCAAGGGGCTGTTGCAAT+GGG | - | chr4_1:67281410-67281429 | Msa0566240:CDS | 55.0% | |
| ! | GAAGCACGATTGAGGTGCCT+TGG | - | chr4_1:67282123-67282142 | Msa0566240:intron | 55.0% |
| CGCGCTACTGGAGAACAGAA+GGG | + | chr4_1:67282273-67282292 | None:intergenic | 55.0% | |
| ! | GATATGAAGGTGCGCGCTAC+TGG | + | chr4_1:67282285-67282304 | None:intergenic | 55.0% |
| GTAGCGCGCACCTTCATATC+AGG | - | chr4_1:67282285-67282304 | Msa0566240:intron | 55.0% | |
| AGGCCTATAGGGAGATGGGT+TGG | + | chr4_1:67282461-67282480 | None:intergenic | 55.0% | |
| ! | TGGGGATGAAGGGAGAGTGT+AGG | + | chr4_1:67283068-67283087 | None:intergenic | 55.0% |
| GAAGCAAGAGCTGGGGATGA+AGG | + | chr4_1:67283079-67283098 | None:intergenic | 55.0% | |
| CCAGAGAGAAGCAAGAGCTG+GGG | + | chr4_1:67283086-67283105 | None:intergenic | 55.0% | |
| GCCAGAGAGAAGCAAGAGCT+GGG | + | chr4_1:67283087-67283106 | None:intergenic | 55.0% | |
| TGCCAGAGAGAAGCAAGAGC+TGG | + | chr4_1:67283088-67283107 | None:intergenic | 55.0% | |
| ACGGTGGAGAGAAGAGACAC+AGG | - | chr4_1:67283432-67283451 | Msa0566240:intron | 55.0% | |
| CGGTGGAGAGAAGAGACACA+GGG | - | chr4_1:67283433-67283452 | Msa0566240:intron | 55.0% | |
| GGTGGAGAGAAGAGACACAG+GGG | - | chr4_1:67283434-67283453 | Msa0566240:intron | 55.0% | |
| AGTTCCATAGACAGGCCTCC+AGG | + | chr4_1:67283944-67283963 | None:intergenic | 55.0% | |
| ! | CACCTCTGGAAGGAAGCCAT+CGG | - | chr4_1:67284615-67284634 | Msa0566240:intron | 55.0% |
| TTCCGATGGCTTCCTTCCAG+AGG | + | chr4_1:67284620-67284639 | None:intergenic | 55.0% | |
| GTCATGGTCGATGGGTGGAG+GGG | + | chr4_1:67278137-67278156 | None:intergenic | 60.0% | |
| !! | ACTGCAGGTGCCGAGGTTTC+TGG | - | chr4_1:67279179-67279198 | Msa0566240:intron | 60.0% |
| !! | CTGCAGGTGCCGAGGTTTCT+GGG | - | chr4_1:67279180-67279199 | Msa0566240:intron | 60.0% |
| !! | TGCAGGTGCCGAGGTTTCTG+GGG | - | chr4_1:67279181-67279200 | Msa0566240:intron | 60.0% |
| ! | GTGCCGAGGTTTCTGGGGAA+GGG | - | chr4_1:67279186-67279205 | Msa0566240:intron | 60.0% |
| CACTGGACGCCGCAGACAAT+GGG | - | chr4_1:67279240-67279259 | Msa0566240:intron | 60.0% | |
| ACTGGACGCCGCAGACAATG+GGG | - | chr4_1:67279241-67279260 | Msa0566240:intron | 60.0% | |
| CAGACAGATGGAGCAGCTGC+CGG | + | chr4_1:67281377-67281396 | None:intergenic | 60.0% | |
| GCGCGCTACTGGAGAACAGA+AGG | + | chr4_1:67282274-67282293 | None:intergenic | 60.0% | |
| !! | GGCACTGGTAGTACCTGCTG+TGG | + | chr4_1:67282619-67282638 | None:intergenic | 60.0% |
| CCCCAGCTCTTGCTTCTCTC+TGG | - | chr4_1:67283083-67283102 | Msa0566240:CDS | 60.0% | |
| TTCTCAGGAAGGCCTGCTCC+TGG | - | chr4_1:67283891-67283910 | Msa0566240:intron | 60.0% | |
| AGGAAGGCCTGCTCCTGGAA+TGG | - | chr4_1:67283896-67283915 | Msa0566240:intron | 60.0% | |
| GTGAGCTCCATTCCAGGAGC+AGG | + | chr4_1:67283906-67283925 | None:intergenic | 60.0% | |
| ACGTCCTGGAGGCCTGTCTA+TGG | - | chr4_1:67283937-67283956 | Msa0566240:intron | 60.0% | |
| CTTTCTGCAGCCGCAGAACC+TGG | - | chr4_1:67284143-67284162 | Msa0566240:intron | 60.0% | |
| TCTCAACAGCGTCCGCCATC+TGG | - | chr4_1:67284742-67284761 | Msa0566240:CDS | 60.0% | |
| GGTCGATGGGTGGAGGGGAA+AGG | + | chr4_1:67278132-67278151 | None:intergenic | 65.0% | |
| ! | GGTGCCGAGGTTTCTGGGGA+AGG | - | chr4_1:67279185-67279204 | Msa0566240:intron | 65.0% |
| GCACTGGACGCCGCAGACAA+TGG | - | chr4_1:67279239-67279258 | Msa0566240:intron | 65.0% | |
| CGGCAGCTGCTCCATCTGTC+TGG | - | chr4_1:67281375-67281394 | Msa0566240:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 67277858 | 67285004 | 67277858 | ID=Msa0566240;Name=Msa0566240 |
| chr4_1 | mRNA | 67277858 | 67285004 | 67277858 | ID=Msa0566240-mRNA-1;Parent=Msa0566240;Name=Msa0566240-mRNA-1;_AED=0.07;_eAED=0.07;_QI=60|1|1|1|0.91|0.84|13|224|417 |
| chr4_1 | exon | 67277858 | 67278267 | 67277858 | ID=Msa0566240-mRNA-1:exon:22026;Parent=Msa0566240-mRNA-1 |
| chr4_1 | exon | 67278669 | 67278796 | 67278669 | ID=Msa0566240-mRNA-1:exon:22025;Parent=Msa0566240-mRNA-1 |
| chr4_1 | exon | 67278881 | 67278964 | 67278881 | ID=Msa0566240-mRNA-1:exon:22024;Parent=Msa0566240-mRNA-1 |
| chr4_1 | exon | 67281395 | 67281560 | 67281395 | ID=Msa0566240-mRNA-1:exon:22023;Parent=Msa0566240-mRNA-1 |
| chr4_1 | exon | 67282063 | 67282128 | 67282063 | ID=Msa0566240-mRNA-1:exon:22022;Parent=Msa0566240-mRNA-1 |
| chr4_1 | exon | 67282203 | 67282290 | 67282203 | ID=Msa0566240-mRNA-1:exon:22021;Parent=Msa0566240-mRNA-1 |
| chr4_1 | exon | 67282431 | 67282495 | 67282431 | ID=Msa0566240-mRNA-1:exon:22020;Parent=Msa0566240-mRNA-1 |
| chr4_1 | exon | 67282606 | 67282671 | 67282606 | ID=Msa0566240-mRNA-1:exon:22019;Parent=Msa0566240-mRNA-1 |
| chr4_1 | exon | 67282805 | 67282878 | 67282805 | ID=Msa0566240-mRNA-1:exon:22018;Parent=Msa0566240-mRNA-1 |
| chr4_1 | exon | 67283082 | 67283115 | 67283082 | ID=Msa0566240-mRNA-1:exon:22017;Parent=Msa0566240-mRNA-1 |
| chr4_1 | exon | 67283594 | 67283695 | 67283594 | ID=Msa0566240-mRNA-1:exon:22016;Parent=Msa0566240-mRNA-1 |
| chr4_1 | exon | 67284700 | 67284915 | 67284700 | ID=Msa0566240-mRNA-1:exon:22015;Parent=Msa0566240-mRNA-1 |
| chr4_1 | exon | 67284966 | 67285004 | 67284966 | ID=Msa0566240-mRNA-1:exon:22014;Parent=Msa0566240-mRNA-1 |
| chr4_1 | five_prime_UTR | 67284966 | 67285004 | 67284966 | ID=Msa0566240-mRNA-1:five_prime_utr;Parent=Msa0566240-mRNA-1 |
| chr4_1 | five_prime_UTR | 67284895 | 67284915 | 67284895 | ID=Msa0566240-mRNA-1:five_prime_utr;Parent=Msa0566240-mRNA-1 |
| chr4_1 | CDS | 67284700 | 67284894 | 67284700 | ID=Msa0566240-mRNA-1:cds;Parent=Msa0566240-mRNA-1 |
| chr4_1 | CDS | 67283594 | 67283695 | 67283594 | ID=Msa0566240-mRNA-1:cds;Parent=Msa0566240-mRNA-1 |
| chr4_1 | CDS | 67283082 | 67283115 | 67283082 | ID=Msa0566240-mRNA-1:cds;Parent=Msa0566240-mRNA-1 |
| chr4_1 | CDS | 67282805 | 67282878 | 67282805 | ID=Msa0566240-mRNA-1:cds;Parent=Msa0566240-mRNA-1 |
| chr4_1 | CDS | 67282606 | 67282671 | 67282606 | ID=Msa0566240-mRNA-1:cds;Parent=Msa0566240-mRNA-1 |
| chr4_1 | CDS | 67282431 | 67282495 | 67282431 | ID=Msa0566240-mRNA-1:cds;Parent=Msa0566240-mRNA-1 |
| chr4_1 | CDS | 67282203 | 67282290 | 67282203 | ID=Msa0566240-mRNA-1:cds;Parent=Msa0566240-mRNA-1 |
| chr4_1 | CDS | 67282063 | 67282128 | 67282063 | ID=Msa0566240-mRNA-1:cds;Parent=Msa0566240-mRNA-1 |
| chr4_1 | CDS | 67281395 | 67281560 | 67281395 | ID=Msa0566240-mRNA-1:cds;Parent=Msa0566240-mRNA-1 |
| chr4_1 | CDS | 67278881 | 67278964 | 67278881 | ID=Msa0566240-mRNA-1:cds;Parent=Msa0566240-mRNA-1 |
| chr4_1 | CDS | 67278669 | 67278796 | 67278669 | ID=Msa0566240-mRNA-1:cds;Parent=Msa0566240-mRNA-1 |
| chr4_1 | CDS | 67278082 | 67278267 | 67278082 | ID=Msa0566240-mRNA-1:cds;Parent=Msa0566240-mRNA-1 |
| chr4_1 | three_prime_UTR | 67277858 | 67278081 | 67277858 | ID=Msa0566240-mRNA-1:three_prime_utr;Parent=Msa0566240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
