AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0567460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0567460 MtrunA17_Chr8g0382191 92.991 428 30 0 12 439 10 437 0.0 826
Msa0567460 MtrunA17_Chr8g0382181 62.080 327 107 5 53 366 8 330 2.67e-131 387
Msa0567460 MtrunA17_Chr2g0279141 61.538 156 56 2 4 159 6 157 1.26e-60 213
Msa0567460 MtrunA17_Chr4g0050401 38.676 287 142 6 7 279 9 275 8.26e-54 193
Msa0567460 MtrunA17_Chr8g0377501 40.152 264 125 7 12 258 15 262 9.01e-50 181
Msa0567460 MtrunA17_Chr3g0122351 57.377 122 52 0 12 133 8 129 1.84e-45 169
Msa0567460 MtrunA17_Chr2g0294711 47.647 170 80 2 12 181 26 186 4.95e-44 164
Msa0567460 MtrunA17_Chr4g0068161 53.147 143 64 1 12 151 26 168 9.79e-37 143
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0567460 AT2G22300.2 45.192 312 146 7 2 290 4 313 3.00e-78 262
Msa0567460 AT2G22300.1 45.192 312 146 7 2 290 4 313 3.00e-78 262
Msa0567460 AT5G64220.1 38.810 353 177 9 3 349 5 324 2.45e-66 229
Msa0567460 AT5G64220.2 38.810 353 177 9 3 349 5 324 2.45e-66 229
Msa0567460 AT5G09410.1 63.580 162 57 2 12 173 17 176 3.51e-62 217
Msa0567460 AT5G09410.2 63.580 162 57 2 12 173 17 176 3.61e-62 217
Msa0567460 AT2G22300.3 44.747 257 117 7 57 290 1 255 6.39e-57 202
Msa0567460 AT5G09410.3 53.646 192 57 3 12 173 76 265 1.41e-56 202
Msa0567460 AT1G67310.1 47.333 150 69 1 12 161 37 176 3.56e-42 160
Msa0567460 AT3G16940.2 54.688 128 58 0 12 139 24 151 3.19e-41 156
Msa0567460 AT3G16940.1 54.688 128 58 0 12 139 24 151 6.47e-41 155
Msa0567460 AT3G16940.3 55.645 124 55 0 16 139 1 124 1.12e-39 152

Find 217 sgRNAs with CRISPR-Local

Find 390 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGTTATTGGGTTCTGTTTC+AGG 0.110677 4_1:+68799837 None:intergenic
TCCAACATTGTTAATGTATT+TGG 0.116953 4_1:+68799956 None:intergenic
GATAGGGGACAGTTAGAATA+AGG 0.169692 4_1:+68800365 None:intergenic
ATTCCCCTTCTAGTGCTTAT+TGG 0.214001 4_1:-68798864 Msa0567460:three_prime_UTR
TGTTATAGTTAGTGAGAATT+TGG 0.234871 4_1:+68802247 None:intergenic
GAATACGATGGTGACAAATT+TGG 0.239421 4_1:-68796835 Msa0567460:three_prime_UTR
ATGAACAACCAAACATATTA+TGG 0.239719 4_1:+68795771 None:intergenic
GAAATTTACCTTTGAGAGAT+AGG 0.252450 4_1:+68800348 None:intergenic
ACTATTGATTCCCGTGTTAT+TGG 0.255860 4_1:+68799824 None:intergenic
TGTGAACTCTCAAAAGTTCT+TGG 0.257449 4_1:-68799927 Msa0567460:CDS
TCTACGTAACATGTTCTAAT+AGG 0.258394 4_1:-68798285 Msa0567460:three_prime_UTR
GCAAGATATCTTAGAAAATA+AGG 0.263006 4_1:-68799892 Msa0567460:CDS
GCCTGAATAGGCACTATCTT+TGG 0.278496 4_1:+68799214 None:intergenic
TTCCCCTTCTAGTGCTTATT+GGG 0.285574 4_1:-68798863 Msa0567460:three_prime_UTR
AGCAACAATTGTTGGTTCTA+AGG 0.288908 4_1:+68797829 None:intergenic
ATTTGAAGACTCGGAAATTA+AGG 0.297823 4_1:-68798707 Msa0567460:intron
AAAACTATGGGAAGATAATT+TGG 0.298279 4_1:-68796498 Msa0567460:three_prime_UTR
CCACCTTCATCTAATACATT+TGG 0.299243 4_1:+68797896 None:intergenic
GTGAACTTTCGCGATGTAAA+TGG 0.307864 4_1:-68797797 Msa0567460:three_prime_UTR
TTGGTTGTTCATTGTATGTA+TGG 0.312248 4_1:-68795760 Msa0567460:three_prime_UTR
ATACCTTCACTTCCCGATAA+TGG 0.312933 4_1:+68800966 None:intergenic
CGTTGATCTTGAAGCATTGT+TGG 0.336518 4_1:-68795840 Msa0567460:three_prime_UTR
TTGCTTCCCTCATATCTCTT+GGG 0.341997 4_1:-68797185 Msa0567460:three_prime_UTR
CAGCCTTTCTTGGCTACGAT+TGG 0.345539 4_1:-68797853 Msa0567460:three_prime_UTR
CCCAAAGATAGTGCCTATTC+AGG 0.346532 4_1:-68799215 Msa0567460:CDS
GATACAGTTGAAAGCGAAAA+TGG 0.348848 4_1:-68798841 Msa0567460:three_prime_UTR
CAGCTGAAGCTGAAGGAAAT+TGG 0.351228 4_1:-68799722 Msa0567460:CDS
GGCACATATTAAAGTTGCTT+TGG 0.354371 4_1:+68800755 None:intergenic
GACAAGTTAAAATCAGATCT+AGG 0.361350 4_1:-68799041 Msa0567460:CDS
CACCTTCATCTAATACATTT+GGG 0.362638 4_1:+68797897 None:intergenic
GGCTATTTCTGAGGGAACTA+TGG 0.368661 4_1:-68796401 Msa0567460:three_prime_UTR
ATGAAGCAGAAGATTGTAAA+TGG 0.369204 4_1:-68798405 Msa0567460:three_prime_UTR
GTCGGTTGGGATTGTGGAAA+AGG 0.373416 4_1:-68796476 Msa0567460:three_prime_UTR
GTTGCTTCCCTCATATCTCT+TGG 0.375690 4_1:-68797186 Msa0567460:three_prime_UTR
CTATTGATTCCCGTGTTATT+GGG 0.377443 4_1:+68799825 None:intergenic
ATTCAATAGCCATGCAAATT+CGG 0.381684 4_1:-68800447 Msa0567460:CDS
AGCTGATCATAGCAAATAGA+TGG 0.386884 4_1:+68798763 None:intergenic
GGTTAGATTGTAACATAATC+AGG 0.390531 4_1:-68795738 Msa0567460:three_prime_UTR
TGAAATTGTGATAGATGATC+AGG 0.393656 4_1:-68800036 Msa0567460:intron
GCGTCCATCCATAATATGTT+TGG 0.399301 4_1:-68795779 Msa0567460:three_prime_UTR
ATGGATGGACTGCTCTTCAT+TGG 0.403464 4_1:-68797778 Msa0567460:three_prime_UTR
TGGTATTGGTCTCTTGCATC+TGG 0.406003 4_1:+68796262 None:intergenic
CCATGCCCACAACATCCTTC+TGG 0.406110 4_1:-68797138 Msa0567460:three_prime_UTR
TTAGAAAAGATGGACATAAC+TGG 0.406867 4_1:-68802034 Msa0567460:CDS
GGAAGATAATTTGGTCGGTT+GGG 0.407139 4_1:-68796489 Msa0567460:three_prime_UTR
CATTCAACAACCTGTGGTAT+TGG 0.408725 4_1:+68796248 None:intergenic
ACCAAATACATTAACAATGT+TGG 0.410916 4_1:-68799957 Msa0567460:CDS
ACGTGAGAGGTCACCAGGTT+AGG 0.411787 4_1:-68796522 Msa0567460:three_prime_UTR
ACATCGTTCTAGTCCATTAT+CGG 0.412410 4_1:-68800979 Msa0567460:CDS
GTATCCCAATAAGCACTAGA+AGG 0.413133 4_1:+68798859 None:intergenic
AATTTGGTCGGTTGGGATTG+TGG 0.413549 4_1:-68796482 Msa0567460:three_prime_UTR
GCCGACCTAGCTTCTGCAAA+TGG 0.416041 4_1:-68797105 Msa0567460:three_prime_UTR
TTTCCTTGTGAACAGGCCTC+TGG 0.421100 4_1:-68799266 Msa0567460:intron
TTCACACCAGCAACAATTGT+TGG 0.422507 4_1:+68797821 None:intergenic
CTTCAGAAAACAACTGAAGA+TGG 0.424083 4_1:-68797926 Msa0567460:three_prime_UTR
TTAGAACCAACAATTGTTGC+TGG 0.425908 4_1:-68797827 Msa0567460:three_prime_UTR
CCTGAATAGGCACTATCTTT+GGG 0.427656 4_1:+68799215 None:intergenic
CATAGTTCTCCAAGTGCACC+TGG 0.428531 4_1:+68798794 None:intergenic
AACTGAGATACAAGAAAATC+AGG 0.429890 4_1:-68796221 Msa0567460:intron
GAATATGAAGAAGCTGAATC+AGG 0.434942 4_1:-68800624 Msa0567460:intron
CATTGATTATTCCCCAAGTT+GGG 0.435352 4_1:-68798731 Msa0567460:three_prime_UTR
ATAGGGGACAGTTAGAATAA+GGG 0.437858 4_1:+68800366 None:intergenic
GGGAAGATAATTTGGTCGGT+TGG 0.442560 4_1:-68796490 Msa0567460:three_prime_UTR
GCCAGTGAATCTTTCATTGA+AGG 0.442930 4_1:+68796940 None:intergenic
CAATTTCCTTCAGCTTCAGC+TGG 0.443285 4_1:+68799723 None:intergenic
CGTGTTGCAGCAACATGAAC+AGG 0.444655 4_1:+68796739 None:intergenic
AAATTTACCTTTGAGAGATA+GGG 0.446563 4_1:+68800349 None:intergenic
AGTTGATCATGTACAAGTTC+TGG 0.447402 4_1:+68797989 None:intergenic
AATGCGAAGTCACACAAGTC+TGG 0.449069 4_1:-68796775 Msa0567460:three_prime_UTR
TCATTGATTATTCCCCAAGT+TGG 0.450073 4_1:-68798732 Msa0567460:three_prime_UTR
TATTCCTTCCCAGGTGCACT+TGG 0.450888 4_1:-68798803 Msa0567460:three_prime_UTR
ACAACAGAGAACACTATTCC+TGG 0.452005 4_1:+68798342 None:intergenic
AGCCTTTCTTGGCTACGATT+GGG 0.452371 4_1:-68797852 Msa0567460:three_prime_UTR
TGTAAATGGTCATGCATGTT+CGG 0.458202 4_1:-68798391 Msa0567460:three_prime_UTR
GAGTCTTCAAATGCCCAACT+TGG 0.460974 4_1:+68798718 None:intergenic
AGTAAAATCAGTTCTTTGCT+TGG 0.461341 4_1:-68798070 Msa0567460:three_prime_UTR
CAGTTCTTTGCTTGGTAGGA+AGG 0.462643 4_1:-68798062 Msa0567460:three_prime_UTR
TTAGAACATGTTACGTAGAA+AGG 0.466234 4_1:+68798289 None:intergenic
AATGGACACAAAGGAATTGC+TGG 0.466727 4_1:-68797087 Msa0567460:three_prime_UTR
ATATTACGTTGGCGTCGAAA+AGG 0.469061 4_1:-68796451 Msa0567460:three_prime_UTR
ACGAGATACTTTAGAAAAGA+TGG 0.469912 4_1:-68802044 Msa0567460:CDS
GAAGTCTCTGCCTCTGTGTT+AGG 0.470588 4_1:+68800681 None:intergenic
ACCTCAACACAAGGCTGGAC+GGG 0.474522 4_1:-68798314 Msa0567460:three_prime_UTR
TCTCAAGGATATGAGACAAT+GGG 0.476448 4_1:-68799798 Msa0567460:CDS
CCCGAGGGAAGTCATGCTCT+TGG 0.481194 4_1:+68798134 None:intergenic
ATATCTCTTGGGGCAGCACC+AGG 0.481476 4_1:-68797174 Msa0567460:three_prime_UTR
ATTCCAGAGAAAACAACAAA+AGG 0.481483 4_1:-68796857 Msa0567460:three_prime_UTR
CCCAAGAGCATGACTTCCCT+CGG 0.481534 4_1:-68798135 Msa0567460:three_prime_UTR
AAGTGCCAGCAGAGATAACC+AGG 0.482366 4_1:-68798360 Msa0567460:three_prime_UTR
TGGATGGACTGCTCTTCATT+GGG 0.482883 4_1:-68797777 Msa0567460:three_prime_UTR
CCGAGGGAAGTCATGCTCTT+GGG 0.487143 4_1:+68798135 None:intergenic
GGGATCGATAAAAGCCTAGT+TGG 0.487311 4_1:-68799020 Msa0567460:CDS
CTCACACGATGAGCCTGAAT+AGG 0.489940 4_1:+68799202 None:intergenic
CTAGTTCTTTACTCATCCAT+CGG 0.491817 4_1:+68798911 None:intergenic
CTATTCCTGGTTATCTCTGC+TGG 0.492732 4_1:+68798355 None:intergenic
GGCTCACGTGAGAGGTCACC+AGG 0.496633 4_1:-68796527 Msa0567460:three_prime_UTR
GTTTCAGGAAAAGACTGAAA+AGG 0.498768 4_1:+68799852 None:intergenic
TGCTTCCCTCATATCTCTTG+GGG 0.499217 4_1:-68797184 Msa0567460:three_prime_UTR
TTGGTAGGAAGGACGATGAA+TGG 0.501312 4_1:-68798051 Msa0567460:three_prime_UTR
AAATCAGTTCTTTGCTTGGT+AGG 0.505479 4_1:-68798066 Msa0567460:three_prime_UTR
CGTTGGCGTCGAAAAGGTAG+TGG 0.510926 4_1:-68796445 Msa0567460:three_prime_UTR
TTCAGAACAAGTTTCGCAGT+TGG 0.512320 4_1:-68796714 Msa0567460:three_prime_UTR
AGTCTTCAAATGCCCAACTT+GGG 0.512638 4_1:+68798719 None:intergenic
CCAGAAGGATGTTGTGGGCA+TGG 0.516822 4_1:+68797138 None:intergenic
TGGTTGTTCATTGTATGTAT+GGG 0.517220 4_1:-68795759 Msa0567460:three_prime_UTR
ACCTTCAATGAAAGATTCAC+TGG 0.517231 4_1:-68796941 Msa0567460:three_prime_UTR
TTTGTTGGTGTGTATGAAGA+AGG 0.517240 4_1:+68799114 None:intergenic
AATTTCTTCAATATCTGTTG+TGG 0.517632 4_1:+68802314 None:intergenic
AAGGTTGCCTGTCATTCCTC+AGG 0.518272 4_1:-68800012 Msa0567460:CDS
CATGGATCAGTAAGTGCTCC+TGG 0.519816 4_1:+68797156 None:intergenic
TGGTAGGAAGGACGATGAAT+GGG 0.520017 4_1:-68798050 Msa0567460:three_prime_UTR
CAGTACAACTATTCCTTCCC+AGG 0.520858 4_1:-68798812 Msa0567460:three_prime_UTR
GAACAAGTTTCGCAGTTGGA+AGG 0.521020 4_1:-68796710 Msa0567460:three_prime_UTR
CATCGTTCTAGTCCATTATC+GGG 0.523240 4_1:-68800978 Msa0567460:CDS
CTTCTTGAGTATAATTGACT+CGG 0.525223 4_1:+68798230 None:intergenic
TGTGTCCATTTGCAGAAGCT+AGG 0.527068 4_1:+68797100 None:intergenic
GGCCCAATCGTAGCCAAGAA+AGG 0.527167 4_1:+68797850 None:intergenic
GATATCTTAGAAAATAAGGC+TGG 0.527732 4_1:-68799888 Msa0567460:CDS
TAGTTATAGTGACAATGAGC+AGG 0.528100 4_1:-68799177 Msa0567460:CDS
ACAAGTTAAAATCAGATCTA+GGG 0.529700 4_1:-68799040 Msa0567460:CDS
TTCAGAAAACAACTGAAGAT+GGG 0.530144 4_1:-68797925 Msa0567460:three_prime_UTR
TTCTCCAAGTGCACCTGGGA+AGG 0.531264 4_1:+68798799 None:intergenic
GGCCCAAATGTATTAGATGA+AGG 0.533133 4_1:-68797899 Msa0567460:three_prime_UTR
GCACTTGGAGAACTATGTAC+TGG 0.534994 4_1:-68798788 Msa0567460:three_prime_UTR
TTCTACCAGAAGGATGTTGT+GGG 0.536843 4_1:+68797133 None:intergenic
CAAATCAGAGGCTATTTCTG+AGG 0.541683 4_1:-68796410 Msa0567460:three_prime_UTR
GTGCTGCCCCAAGAGATATG+AGG 0.541703 4_1:+68797178 None:intergenic
AACAAGTTTCGCAGTTGGAA+GGG 0.542396 4_1:-68796709 Msa0567460:three_prime_UTR
CACCTCAACACAAGGCTGGA+CGG 0.542743 4_1:-68798315 Msa0567460:three_prime_UTR
AGCTCGACAGTTTCAACCGA+TGG 0.542906 4_1:-68798927 Msa0567460:three_prime_UTR
ACCCGTCCAGCCTTGTGTTG+AGG 0.545426 4_1:+68798313 None:intergenic
TCATCCACCTGAGGAATGAC+AGG 0.545608 4_1:+68800005 None:intergenic
TATTACAAGCACAATATCGA+TGG 0.548796 4_1:-68802290 Msa0567460:CDS
GAGTGTCTTCTATTCCAACT+AGG 0.550195 4_1:+68799006 None:intergenic
TTTGCAGAAGCTAGGTCGGC+TGG 0.551088 4_1:+68797108 None:intergenic
AGAATTTGGCAAATTTCAGC+CGG 0.551681 4_1:+68802261 None:intergenic
TGAAGCTGAAGGAAATTGGC+AGG 0.551960 4_1:-68799718 Msa0567460:intron
AAGTGTATCTGTGGCAGAAG+AGG 0.553975 4_1:-68798958 Msa0567460:CDS
TGGAAAAGGTTATATTACGT+TGG 0.554077 4_1:-68796462 Msa0567460:three_prime_UTR
TATCCCAATAAGCACTAGAA+GGG 0.554536 4_1:+68798860 None:intergenic
AATTTACCTTTGAGAGATAG+GGG 0.555076 4_1:+68800350 None:intergenic
CGATGGATGAGTAAAGAACT+AGG 0.555800 4_1:-68798910 Msa0567460:three_prime_UTR
TTTATACCAGCTGAAGCTGA+AGG 0.559293 4_1:-68799729 Msa0567460:CDS
AGTGTATCTGTGGCAGAAGA+GGG 0.559488 4_1:-68798957 Msa0567460:CDS
GCAGGAAGCAAACTGAGAAA+AGG 0.561949 4_1:-68796327 Msa0567460:three_prime_UTR
GTATTAGATGAAGGTGGCCA+AGG 0.562370 4_1:-68797890 Msa0567460:three_prime_UTR
ACAACCAAACATATTATGGA+TGG 0.563921 4_1:+68795775 None:intergenic
AAATCAGAGGCTATTTCTGA+GGG 0.564813 4_1:-68796409 Msa0567460:three_prime_UTR
ACAATATCGATGGCTACGTC+CGG 0.566740 4_1:-68802280 Msa0567460:CDS
TTGTATGTTTGTTGATCACA+AGG 0.569291 4_1:+68800711 None:intergenic
AAGTTGGGCATTTGAAGACT+CGG 0.569405 4_1:-68798716 Msa0567460:three_prime_UTR
CTGCAAAATGAAGCACACCT+TGG 0.570206 4_1:+68797873 None:intergenic
TCCATTTGCAGAAGCTAGGT+CGG 0.576737 4_1:+68797104 None:intergenic
GTCTTCAAATGCCCAACTTG+GGG 0.578425 4_1:+68798720 None:intergenic
TATACACCTCAACACAAGGC+TGG 0.578694 4_1:-68798319 Msa0567460:three_prime_UTR
ATACTGTTTAGTAATGCTGA+TGG 0.578753 4_1:+68799764 None:intergenic
GCTAATTTCTAAGTGGCTGT+AGG 0.578993 4_1:+68795800 None:intergenic
AACTGTCCCCTATCTCTCAA+AGG 0.580934 4_1:-68800356 Msa0567460:intron
GGCACTATCTTTGGGCCATG+TGG 0.581003 4_1:+68799223 None:intergenic
GGAATCAATAGTACTTCTCA+AGG 0.582466 4_1:-68799813 Msa0567460:CDS
CCAAGAGCATGACTTCCCTC+GGG 0.583296 4_1:-68798134 Msa0567460:three_prime_UTR
CTATGGGAAGATAATTTGGT+CGG 0.585590 4_1:-68796494 Msa0567460:three_prime_UTR
TCATACACACCAACAAAACA+AGG 0.587677 4_1:-68799108 Msa0567460:CDS
TAAAAGATAAACTACATGCA+TGG 0.588544 4_1:-68797952 Msa0567460:three_prime_UTR
GAAGCAAACTGAGAAAAGGT+TGG 0.588658 4_1:-68796323 Msa0567460:three_prime_UTR
TTCTCAAGGATATGAGACAA+TGG 0.588805 4_1:-68799799 Msa0567460:CDS
TGCTGCCCCAAGAGATATGA+GGG 0.589348 4_1:+68797179 None:intergenic
GTTCTACCAGAAGGATGTTG+TGG 0.592131 4_1:+68797132 None:intergenic
TTATTATAGGCTCACGTGAG+AGG 0.593673 4_1:-68796535 Msa0567460:intron
AGTAGAAATCCGAATTTGCA+TGG 0.594305 4_1:+68800438 None:intergenic
CCATTGACTTCACTCTAGCA+AGG 0.595945 4_1:+68796293 None:intergenic
CGAAAAGGTAGTGGTTTGCG+TGG 0.599858 4_1:-68796436 Msa0567460:three_prime_UTR
CATTGACTTCACTCTAGCAA+GGG 0.600713 4_1:+68796294 None:intergenic
CCTTGCTAGAGTGAAGTCAA+TGG 0.603870 4_1:-68796293 Msa0567460:three_prime_UTR
TTGTTATACACCTCAACACA+AGG 0.604166 4_1:-68798323 Msa0567460:three_prime_UTR
ATTCTTTAAGCGCATCCACA+TGG 0.606620 4_1:-68799238 Msa0567460:CDS
AGAAACATGAGAGAAACCGT+TGG 0.609159 4_1:-68797012 Msa0567460:three_prime_UTR
TTACACTGCTACTACGCCCA+TGG 0.609511 4_1:-68801720 Msa0567460:CDS
GACTCTATTAAGTGTATCTG+TGG 0.611735 4_1:-68798967 Msa0567460:CDS
ATTGCTGCTTCTGATCTCAC+CGG 0.611990 4_1:+68798198 None:intergenic
ACTCAAGAAGTCAACACTGC+CGG 0.614091 4_1:-68798217 Msa0567460:three_prime_UTR
AGTCCATTATCGGGAAGTGA+AGG 0.615277 4_1:-68800969 Msa0567460:intron
TCGGCTGGTGTTCTACCAGA+AGG 0.617785 4_1:+68797123 None:intergenic
TTGTGATAGATGATCAGGAA+AGG 0.618020 4_1:-68800031 Msa0567460:intron
GTTGCCTGTCATTCCTCAGG+TGG 0.619752 4_1:-68800009 Msa0567460:CDS
CTATTCAGGCTCATCGTGTG+AGG 0.626917 4_1:-68799201 Msa0567460:CDS
ATGAAGAAGGAACTGTTCCA+AGG 0.628051 4_1:+68799127 None:intergenic
ACTTTCGCGATGTAAATGGA+TGG 0.628820 4_1:-68797793 Msa0567460:three_prime_UTR
TCTGAGGGAACTATGGTACA+AGG 0.629731 4_1:-68796394 Msa0567460:three_prime_UTR
GATGGACGCTAATTTCTAAG+TGG 0.633815 4_1:+68795793 None:intergenic
TGACCACTGTTAATGCTAGA+CGG 0.638659 4_1:+68800654 None:intergenic
ATCCCAATAAGCACTAGAAG+GGG 0.640484 4_1:+68798861 None:intergenic
GCTTCTGCAAATGGACACAA+AGG 0.643597 4_1:-68797096 Msa0567460:three_prime_UTR
GGAAGCTCATGAGAGACTCA+AGG 0.645990 4_1:-68801982 Msa0567460:intron
TGAAACAGAACCCAATAACA+CGG 0.650306 4_1:-68799835 Msa0567460:CDS
AAAACAACTGAAGATGGGAA+AGG 0.651527 4_1:-68797920 Msa0567460:three_prime_UTR
TAATCGAATCTAAATCCCGA+GGG 0.653442 4_1:+68798119 None:intergenic
CCAAATGTATTAGATGAAGG+TGG 0.656043 4_1:-68797896 Msa0567460:three_prime_UTR
ATGCAAGAGACCAATACCAC+AGG 0.658465 4_1:-68796258 Msa0567460:three_prime_UTR
CTAATCGAATCTAAATCCCG+AGG 0.658480 4_1:+68798118 None:intergenic
GAAACAGAACCCAATAACAC+GGG 0.662228 4_1:-68799834 Msa0567460:CDS
ACGAACTTACTGGATGCTTG+AGG 0.663844 4_1:-68801673 Msa0567460:CDS
TTACCGTCTAGCATTAACAG+TGG 0.677007 4_1:-68800657 Msa0567460:CDS
GAAAAGATGGACATAACTGG+AGG 0.677852 4_1:-68802031 Msa0567460:CDS
ATGGACTGCTCTTCATTGGG+CGG 0.678377 4_1:-68797774 Msa0567460:three_prime_UTR
AAACAACAAAAGGAATACGA+TGG 0.685779 4_1:-68796847 Msa0567460:three_prime_UTR
TTTGCGTGGATTCAAATCAG+AGG 0.685933 4_1:-68796422 Msa0567460:three_prime_UTR
TTACAACATTCAACAACCTG+TGG 0.686006 4_1:+68796242 None:intergenic
AAAATCGTAGTCATCCTCAG+TGG 0.687131 4_1:+68796360 None:intergenic
ATAGTTCTCCAAGTGCACCT+GGG 0.691663 4_1:+68798795 None:intergenic
CTCAAGGATATGAGACAATG+GGG 0.695507 4_1:-68799797 Msa0567460:CDS
ATACTTGGAGGCATATACGA+AGG 0.704350 4_1:+68802204 None:intergenic
GCTTAAAGAATTAAAACCAG+AGG 0.714724 4_1:+68799250 None:intergenic
CAAAGTTATGCCTAACACAG+AGG 0.717841 4_1:-68800691 Msa0567460:CDS
AGTAAGATATCATCCACCTG+AGG 0.729515 4_1:+68799996 None:intergenic
AGGTGTATCATCTTCCACTG+AGG 0.765631 4_1:-68796374 Msa0567460:three_prime_UTR
ACAATGCTTCAAGATCAACG+AGG 0.891821 4_1:+68795843 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTATTTAGTTTTAAATC+AGG - chr4_1:68798502-68798521 Msa0567460:intron 10.0%
!! AAAAAGTTATTAAAAAAACA+TGG - chr4_1:68799510-68799529 Msa0567460:intron 10.0%
!!! AGAAATTGCTAATTTTTTTT+TGG - chr4_1:68796985-68797004 Msa0567460:three_prime_UTR 15.0%
!!! TTTCAATTTTACAATTAGTA+TGG + chr4_1:68798017-68798036 None:intergenic 15.0%
!!! TTACTAGTTTATCATAAATA+CGG - chr4_1:68801980-68801999 Msa0567460:intron 15.0%
!!! TTTTATGAATTGTGATGTTT+TGG - chr4_1:68795954-68795973 Msa0567460:intron 20.0%
!! AGTTACAACTTTAATCTAAT+TGG - chr4_1:68796162-68796181 Msa0567460:intron 20.0%
!! TCATATGTTATTCAATGTAA+TGG + chr4_1:68796301-68796320 None:intergenic 20.0%
!! GACAAATAATTTATAATCCT+TGG - chr4_1:68796489-68796508 Msa0567460:three_prime_UTR 20.0%
!! TGATTAATAAAATTCCGTTA+AGG - chr4_1:68796538-68796557 Msa0567460:intron 20.0%
!!! AATTGCTAATTTTTTTTTGG+TGG - chr4_1:68796988-68797007 Msa0567460:three_prime_UTR 20.0%
!! ACATTCTTAGTAACAATTTA+AGG - chr4_1:68797194-68797213 Msa0567460:three_prime_UTR 20.0%
!!! GAATACCTATATTACTTTTA+AGG + chr4_1:68797268-68797287 None:intergenic 20.0%
!!! ATTAGATTCTTCATTTTCTT+TGG + chr4_1:68797337-68797356 None:intergenic 20.0%
!! ATATTAAAATAGACACAAGA+AGG + chr4_1:68797576-68797595 None:intergenic 20.0%
!!! TCTAGAATAGAATTTTATTG+CGG + chr4_1:68797908-68797927 None:intergenic 20.0%
!!! AAAAATTTAAAGACTAGTCA+AGG - chr4_1:68798685-68798704 Msa0567460:intron 20.0%
!!! CTTTTAAAAGTATTTCATGA+GGG + chr4_1:68799002-68799021 None:intergenic 20.0%
!!! ACTACTAATATCAATTTTAC+AGG - chr4_1:68799607-68799626 Msa0567460:intron 20.0%
!!! GATACTTTTAATAAACGATT+TGG - chr4_1:68799899-68799918 Msa0567460:CDS 20.0%
!!! TGATTTTTCAATTTTCATTG+AGG - chr4_1:68800824-68800843 Msa0567460:intron 20.0%
!!! ATAATAAGTTAGAGCATTAA+AGG + chr4_1:68801520-68801539 None:intergenic 20.0%
!! TTAATGCTCTAACTTATTAT+AGG - chr4_1:68801520-68801539 Msa0567460:intron 20.0%
!! AAAACATATAGTGTGAAATT+TGG + chr4_1:68801915-68801934 None:intergenic 20.0%
!!! TACTAGTTTATCATAAATAC+GGG - chr4_1:68801981-68802000 Msa0567460:intron 20.0%
!! AATTAAATGATATTAACTGC+TGG + chr4_1:68802097-68802116 None:intergenic 20.0%
! AATTTCTTCAATATCTGTTG+TGG + chr4_1:68795757-68795776 None:intergenic 25.0%
! TGTTATAGTTAGTGAGAATT+TGG + chr4_1:68795824-68795843 None:intergenic 25.0%
! GAATCAGAATTAATCATACT+TGG + chr4_1:68795882-68795901 None:intergenic 25.0%
! AAAAAGATGGAAAAACTGTT+AGG - chr4_1:68796064-68796083 Msa0567460:intron 25.0%
! AAAAGATGGAAAAACTGTTA+GGG - chr4_1:68796065-68796084 Msa0567460:intron 25.0%
!! ATACCTAAGGTTTTTATCTT+AGG + chr4_1:68796136-68796155 None:intergenic 25.0%
!! TCAGAACATCTTTCTTTTTA+CGG - chr4_1:68796269-68796288 Msa0567460:three_prime_UTR 25.0%
!! GAATAACATATGATGTTTTC+AGG - chr4_1:68796308-68796327 Msa0567460:three_prime_UTR 25.0%
! TTTAGTGTGAGATTTGAAAA+TGG + chr4_1:68796439-68796458 None:intergenic 25.0%
!!! TAAGTTGTTTTACAATTGAG+AGG + chr4_1:68796650-68796669 None:intergenic 25.0%
! TTACATGATATGCTTTAACT+AGG + chr4_1:68796951-68796970 None:intergenic 25.0%
!!! TCTTTTTCCTTGTTATTTGA+TGG - chr4_1:68797155-68797174 Msa0567460:three_prime_UTR 25.0%
!!! ACATATAATTTTTCAGTGCT+TGG - chr4_1:68797232-68797251 Msa0567460:intron 25.0%
!! AGCTATTCAAAAAGTTTTCT+AGG + chr4_1:68797527-68797546 None:intergenic 25.0%
!! AAATTTACCTTTGAGAGATA+GGG + chr4_1:68797722-68797741 None:intergenic 25.0%
! ATACATGATTGATCGAAAAA+GGG + chr4_1:68797797-68797816 None:intergenic 25.0%
! AATACATGATTGATCGAAAA+AGG + chr4_1:68797798-68797817 None:intergenic 25.0%
! TTTATATATTCCGCAAATGT+TGG - chr4_1:68797959-68797978 Msa0567460:three_prime_UTR 25.0%
! ACCAAATACATTAACAATGT+TGG - chr4_1:68798111-68798130 Msa0567460:three_prime_UTR 25.0%
! TCCAACATTGTTAATGTATT+TGG + chr4_1:68798115-68798134 None:intergenic 25.0%
! GCAAGATATCTTAGAAAATA+AGG - chr4_1:68798176-68798195 Msa0567460:three_prime_UTR 25.0%
! GTTCTATATAAGCTTCAATA+TGG - chr4_1:68798536-68798555 Msa0567460:intron 25.0%
!!! GCTTTTAAAAGTATTTCATG+AGG + chr4_1:68799003-68799022 None:intergenic 25.0%
! ACAAGTTAAAATCAGATCTA+GGG - chr4_1:68799028-68799047 Msa0567460:CDS 25.0%
! TTAAAAAAACATGGTATCCA+TGG - chr4_1:68799519-68799538 Msa0567460:intron 25.0%
! TAAAAGATAAACTACATGCA+TGG - chr4_1:68800116-68800135 Msa0567460:intron 25.0%
! TGACAATACATGAAACTAAT+AGG - chr4_1:68800400-68800419 Msa0567460:CDS 25.0%
! AATATGCTTCATTTCATCAT+AGG - chr4_1:68800527-68800546 Msa0567460:intron 25.0%
! ATATGCTTCATTTCATCATA+GGG - chr4_1:68800528-68800547 Msa0567460:intron 25.0%
!!! TATTATTTTAGCATACCTCA+CGG + chr4_1:68800648-68800667 None:intergenic 25.0%
! TGCTCATTTAAATAATCGAA+GGG - chr4_1:68800726-68800745 Msa0567460:CDS 25.0%
!! TGCATTTTACTTTCATTATC+AGG - chr4_1:68800850-68800869 Msa0567460:intron 25.0%
!! GCATTTTACTTTCATTATCA+GGG - chr4_1:68800851-68800870 Msa0567460:intron 25.0%
! TTTGTACATAATTCATGCAA+AGG + chr4_1:68801449-68801468 None:intergenic 25.0%
! AAAACTATGGGAAGATAATT+TGG - chr4_1:68801570-68801589 Msa0567460:intron 25.0%
! ATGAACAACCAAACATATTA+TGG + chr4_1:68802300-68802319 None:intergenic 25.0%
TATTACAAGCACAATATCGA+TGG - chr4_1:68795778-68795797 Msa0567460:three_prime_UTR 30.0%
TCAGAATTAATCATACTTGG+AGG + chr4_1:68795879-68795898 None:intergenic 30.0%
!! TGAATTGTGATGTTTTGGAT+TGG - chr4_1:68795959-68795978 Msa0567460:intron 30.0%
!! ACTTTTCTTGTTTGATCGAA+AGG - chr4_1:68795999-68796018 Msa0567460:intron 30.0%
! ACGAGATACTTTAGAAAAGA+TGG - chr4_1:68796024-68796043 Msa0567460:intron 30.0%
TTAGAAAAGATGGACATAAC+TGG - chr4_1:68796034-68796053 Msa0567460:intron 30.0%
CAACCTAAGATAAAAACCTT+AGG - chr4_1:68796130-68796149 Msa0567460:intron 30.0%
TGTAACTGTAACAATACCTA+AGG + chr4_1:68796149-68796168 None:intergenic 30.0%
AATGTCATTGAAATCAATCC+TGG - chr4_1:68796227-68796246 Msa0567460:three_prime_UTR 30.0%
ATTGAAATCAATCCTGGAAT+AGG - chr4_1:68796233-68796252 Msa0567460:three_prime_UTR 30.0%
TTCAGTTTATTTCCTATTCC+AGG + chr4_1:68796248-68796267 None:intergenic 30.0%
!!! ATTGTCATTTTGTTCTCCAT+GGG + chr4_1:68796367-68796386 None:intergenic 30.0%
!!! AATTGTCATTTTGTTCTCCA+TGG + chr4_1:68796368-68796387 None:intergenic 30.0%
! ATTTTCAAAGACGAACTTAC+TGG - chr4_1:68796385-68796404 Msa0567460:three_prime_UTR 30.0%
ATCCTTGGTTTATAACTAAG+TGG - chr4_1:68796504-68796523 Msa0567460:three_prime_UTR 30.0%
AACCACTTAGTTATAAACCA+AGG + chr4_1:68796509-68796528 None:intergenic 30.0%
TTGGTTTATAACTAAGTGGT+TGG - chr4_1:68796508-68796527 Msa0567460:three_prime_UTR 30.0%
TGGTTTATAACTAAGTGGTT+GGG - chr4_1:68796509-68796528 Msa0567460:three_prime_UTR 30.0%
AAGAAACGATTTGACCTTAA+CGG + chr4_1:68796555-68796574 None:intergenic 30.0%
TTTGTATTCGACATTGTTAC+AGG - chr4_1:68797056-68797075 Msa0567460:three_prime_UTR 30.0%
TTGTATTCGACATTGTTACA+GGG - chr4_1:68797057-68797076 Msa0567460:three_prime_UTR 30.0%
AAAGCTTCCATCAAATAACA+AGG + chr4_1:68797165-68797184 None:intergenic 30.0%
CTGGTCCTTAAAAGTAATAT+AGG - chr4_1:68797260-68797279 Msa0567460:intron 30.0%
! TTGTATGTTTGTTGATCACA+AGG + chr4_1:68797360-68797379 None:intergenic 30.0%
ATTCAATAGCCATGCAAATT+CGG - chr4_1:68797621-68797640 Msa0567460:intron 30.0%
! AATTTACCTTTGAGAGATAG+GGG + chr4_1:68797721-68797740 None:intergenic 30.0%
! GAAATTTACCTTTGAGAGAT+AGG + chr4_1:68797723-68797742 None:intergenic 30.0%
! TATTGCTGTGTCATTAAAAG+AGG - chr4_1:68797814-68797833 Msa0567460:three_prime_UTR 30.0%
! ATTGCTGTGTCATTAAAAGA+GGG - chr4_1:68797815-68797834 Msa0567460:three_prime_UTR 30.0%
TACAATTAGTATGGCATGTA+AGG + chr4_1:68798008-68798027 None:intergenic 30.0%
TGAAATTGTGATAGATGATC+AGG - chr4_1:68798032-68798051 Msa0567460:three_prime_UTR 30.0%
GATATCTTAGAAAATAAGGC+TGG - chr4_1:68798180-68798199 Msa0567460:three_prime_UTR 30.0%
ATACTGTTTAGTAATGCTGA+TGG + chr4_1:68798307-68798326 None:intergenic 30.0%
! GAAATGTGTCATTCTGATAT+TGG - chr4_1:68798402-68798421 Msa0567460:three_prime_UTR 30.0%
! TCTTAATTTTCCTTGTGAAC+AGG - chr4_1:68798795-68798814 Msa0567460:three_prime_UTR 30.0%
GCTTAAAGAATTAAAACCAG+AGG + chr4_1:68798821-68798840 None:intergenic 30.0%
!! AGTTGATTTTCAACAATCCT+TGG - chr4_1:68798924-68798943 Msa0567460:three_prime_UTR 30.0%
GACAAGTTAAAATCAGATCT+AGG - chr4_1:68799027-68799046 Msa0567460:CDS 30.0%
ATTTGAAGACTCGGAAATTA+AGG - chr4_1:68799361-68799380 Msa0567460:intron 30.0%
CAAGTGCAGAATATCAAAAT+AGG + chr4_1:68799390-68799409 None:intergenic 30.0%
! TTTTCTCTCTTTTTCTTCCA+TGG + chr4_1:68799539-68799558 None:intergenic 30.0%
AAAGTGCACTATATTGATGA+CGG - chr4_1:68799564-68799583 Msa0567460:intron 30.0%
! ATTTTACAGGTTCTCATTTC+AGG - chr4_1:68799620-68799639 Msa0567460:intron 30.0%
ATGAAGCAGAAGATTGTAAA+TGG - chr4_1:68799663-68799682 Msa0567460:intron 30.0%
TTAGAACATGTTACGTAGAA+AGG + chr4_1:68799782-68799801 None:intergenic 30.0%
TCTACGTAACATGTTCTAAT+AGG - chr4_1:68799783-68799802 Msa0567460:CDS 30.0%
CTTCTTGAGTATAATTGACT+CGG + chr4_1:68799841-68799860 None:intergenic 30.0%
AGTAAAATCAGTTCTTTGCT+TGG - chr4_1:68799998-68800017 Msa0567460:CDS 30.0%
TTCAGAAAACAACTGAAGAT+GGG - chr4_1:68800143-68800162 Msa0567460:intron 30.0%
CACCTTCATCTAATACATTT+GGG + chr4_1:68800174-68800193 None:intergenic 30.0%
ATTGTCAAAGTGTATCATGT+TGG + chr4_1:68800387-68800406 None:intergenic 30.0%
GTACTGTATAAATGTGAAAC+AGG - chr4_1:68800463-68800482 Msa0567460:intron 30.0%
!!! TAAGCATTTTAACTTCTGCT+AGG + chr4_1:68800489-68800508 None:intergenic 30.0%
CATAGGGTTGAAAAATGAAA+AGG - chr4_1:68800544-68800563 Msa0567460:intron 30.0%
! TTTTTCCATAACAAAAACGC+AGG + chr4_1:68800579-68800598 None:intergenic 30.0%
GTGCTCATTTAAATAATCGA+AGG - chr4_1:68800725-68800744 Msa0567460:CDS 30.0%
GCTCATTTAAATAATCGAAG+GGG - chr4_1:68800727-68800746 Msa0567460:CDS 30.0%
ATTCCAGAGAAAACAACAAA+AGG - chr4_1:68801211-68801230 Msa0567460:intron 30.0%
!!! ATTCCTTTTGTTGTTTTCTC+TGG + chr4_1:68801217-68801236 None:intergenic 30.0%
AAACAACAAAAGGAATACGA+TGG - chr4_1:68801221-68801240 Msa0567460:intron 30.0%
ACAGCGAATTGTAAAAATTC+AGG - chr4_1:68801406-68801425 Msa0567460:intron 30.0%
TACATAATTCATGCAAAGGT+TGG + chr4_1:68801445-68801464 None:intergenic 30.0%
TGGAAAAGGTTATATTACGT+TGG - chr4_1:68801606-68801625 Msa0567460:intron 30.0%
!!! GACTACGATTTTTTGAAAGA+AGG - chr4_1:68801719-68801738 Msa0567460:CDS 30.0%
AACTGAGATACAAGAAAATC+AGG - chr4_1:68801847-68801866 Msa0567460:intron 30.0%
TTGCACAGTTGTGAAAAAAA+TGG + chr4_1:68801941-68801960 None:intergenic 30.0%
ATCAAGAATGCAAAACTTAG+AGG - chr4_1:68802005-68802024 Msa0567460:CDS 30.0%
AACCATAATGCAAAATCATC+AGG - chr4_1:68802059-68802078 Msa0567460:CDS 30.0%
!! AAAAGGCATTTACAAAAGAC+TGG + chr4_1:68802148-68802167 None:intergenic 30.0%
! CTTTTGTAAATGCCTTTTGT+AGG - chr4_1:68802150-68802169 Msa0567460:intron 30.0%
ACAACCAAACATATTATGGA+TGG + chr4_1:68802296-68802315 None:intergenic 30.0%
TTGGTTGTTCATTGTATGTA+TGG - chr4_1:68802308-68802327 Msa0567460:CDS 30.0%
TGGTTGTTCATTGTATGTAT+GGG - chr4_1:68802309-68802328 Msa0567460:CDS 30.0%
GGTTAGATTGTAACATAATC+AGG - chr4_1:68802330-68802349 Msa0567460:CDS 30.0%
AGAATTTGGCAAATTTCAGC+CGG + chr4_1:68795810-68795829 None:intergenic 35.0%
!!! GTTTTGGATTGGTTGACAAT+AGG - chr4_1:68795970-68795989 Msa0567460:intron 35.0%
AACTGGAGGAAGAAAAAAGA+TGG - chr4_1:68796051-68796070 Msa0567460:intron 35.0%
!! AACATATGATGTTTTCAGGC+TGG - chr4_1:68796312-68796331 Msa0567460:three_prime_UTR 35.0%
! CAGACAAGGCTTTAACATAA+AGG + chr4_1:68796683-68796702 None:intergenic 35.0%
ATTAAGCGCTTATTCAGACA+AGG + chr4_1:68796697-68796716 None:intergenic 35.0%
CAATACCAATATGTGTGAGA+TGG + chr4_1:68796792-68796811 None:intergenic 35.0%
! TTTTCTTCATTTGCTCTGCA+TGG + chr4_1:68796816-68796835 None:intergenic 35.0%
GTATTGCTGATCACATGTAT+TGG + chr4_1:68796909-68796928 None:intergenic 35.0%
!! AAAGAAGTACTTCCAGAGAT+AGG + chr4_1:68797016-68797035 None:intergenic 35.0%
!!! TCTCTGGAAGTACTTCTTTT+AGG - chr4_1:68797017-68797036 Msa0567460:three_prime_UTR 35.0%
ACATCGTTCTAGTCCATTAT+CGG - chr4_1:68797089-68797108 Msa0567460:three_prime_UTR 35.0%
! TTTTCAGTGCTTGGTAAATC+TGG - chr4_1:68797241-68797260 Msa0567460:intron 35.0%
!!! TGATCAAGTTTTTTCCTCCA+GGG - chr4_1:68797288-68797307 Msa0567460:intron 35.0%
GGCACATATTAAAGTTGCTT+TGG + chr4_1:68797316-68797335 None:intergenic 35.0%
GAATATGAAGAAGCTGAATC+AGG - chr4_1:68797444-68797463 Msa0567460:intron 35.0%
AGTAGAAATCCGAATTTGCA+TGG + chr4_1:68797633-68797652 None:intergenic 35.0%
! GCTTTAATCTTTTGAACAGC+AGG + chr4_1:68797676-68797695 None:intergenic 35.0%
ATAGGGGACAGTTAGAATAA+GGG + chr4_1:68797705-68797724 None:intergenic 35.0%
! TTAAAAGAGGGTGACTTTTG+AGG - chr4_1:68797827-68797846 Msa0567460:three_prime_UTR 35.0%
TTGTGATAGATGATCAGGAA+AGG - chr4_1:68798037-68798056 Msa0567460:three_prime_UTR 35.0%
TGTGAACTCTCAAAAGTTCT+TGG - chr4_1:68798141-68798160 Msa0567460:three_prime_UTR 35.0%
!! AAGTTCTTGGCTTTTCATCA+TGG - chr4_1:68798154-68798173 Msa0567460:three_prime_UTR 35.0%
GTTTCAGGAAAAGACTGAAA+AGG + chr4_1:68798219-68798238 None:intergenic 35.0%
TGAAACAGAACCCAATAACA+CGG - chr4_1:68798233-68798252 Msa0567460:three_prime_UTR 35.0%
!! CTATTGATTCCCGTGTTATT+GGG + chr4_1:68798246-68798265 None:intergenic 35.0%
!! ACTATTGATTCCCGTGTTAT+TGG + chr4_1:68798247-68798266 None:intergenic 35.0%
GGAATCAATAGTACTTCTCA+AGG - chr4_1:68798255-68798274 Msa0567460:three_prime_UTR 35.0%
TTCTCAAGGATATGAGACAA+TGG - chr4_1:68798269-68798288 Msa0567460:three_prime_UTR 35.0%
TCTCAAGGATATGAGACAAT+GGG - chr4_1:68798270-68798289 Msa0567460:three_prime_UTR 35.0%
AACCATGTCTGCAAGTAAAA+TGG - chr4_1:68798448-68798467 Msa0567460:intron 35.0%
! ATCCATTTTACTTGCAGACA+TGG + chr4_1:68798453-68798472 None:intergenic 35.0%
GAGCAGTTAAATGAGTTTGA+TGG + chr4_1:68798766-68798785 None:intergenic 35.0%
TAGTTATAGTGACAATGAGC+AGG - chr4_1:68798891-68798910 Msa0567460:three_prime_UTR 35.0%
TTTGTTGGTGTGTATGAAGA+AGG + chr4_1:68798957-68798976 None:intergenic 35.0%
TCATACACACCAACAAAACA+AGG - chr4_1:68798960-68798979 Msa0567460:CDS 35.0%
!!! GCATAAGAACCTTGTTTTGT+TGG + chr4_1:68798972-68798991 None:intergenic 35.0%
GACTCTATTAAGTGTATCTG+TGG - chr4_1:68799101-68799120 Msa0567460:CDS 35.0%
! CTAGTTCTTTACTCATCCAT+CGG + chr4_1:68799160-68799179 None:intergenic 35.0%
TATCCCAATAAGCACTAGAA+GGG + chr4_1:68799211-68799230 None:intergenic 35.0%
GATACAGTTGAAAGCGAAAA+TGG - chr4_1:68799227-68799246 Msa0567460:CDS 35.0%
AGCTGATCATAGCAAATAGA+TGG + chr4_1:68799308-68799327 None:intergenic 35.0%
! TCATTGATTATTCCCCAAGT+TGG - chr4_1:68799336-68799355 Msa0567460:intron 35.0%
! CATTGATTATTCCCCAAGTT+GGG - chr4_1:68799337-68799356 Msa0567460:intron 35.0%
AGTGAACATATGGTCAAAAC+TGG + chr4_1:68799413-68799432 None:intergenic 35.0%
ACAACAGTTCAGTGAACATA+TGG + chr4_1:68799423-68799442 None:intergenic 35.0%
TGTAAATGGTCATGCATGTT+CGG - chr4_1:68799677-68799696 Msa0567460:intron 35.0%
TTGTTATACACCTCAACACA+AGG - chr4_1:68799745-68799764 Msa0567460:CDS 35.0%
TAATCGAATCTAAATCCCGA+GGG + chr4_1:68799952-68799971 None:intergenic 35.0%
AAATCAGTTCTTTGCTTGGT+AGG - chr4_1:68800002-68800021 Msa0567460:CDS 35.0%
AGTTGATCATGTACAAGTTC+TGG + chr4_1:68800082-68800101 None:intergenic 35.0%
!! CATCTTCAGTTGTTTTCTGA+AGG + chr4_1:68800144-68800163 None:intergenic 35.0%
CTTCAGAAAACAACTGAAGA+TGG - chr4_1:68800142-68800161 Msa0567460:intron 35.0%
AAAACAACTGAAGATGGGAA+AGG - chr4_1:68800148-68800167 Msa0567460:intron 35.0%
CCACCTTCATCTAATACATT+TGG + chr4_1:68800175-68800194 None:intergenic 35.0%
CCAAATGTATTAGATGAAGG+TGG - chr4_1:68800172-68800191 Msa0567460:intron 35.0%
!! AGCAACAATTGTTGGTTCTA+AGG + chr4_1:68800242-68800261 None:intergenic 35.0%
TTAGAACCAACAATTGTTGC+TGG - chr4_1:68800241-68800260 Msa0567460:intron 35.0%
GGGTTGAAAAATGAAAAGGT+TGG - chr4_1:68800548-68800567 Msa0567460:intron 35.0%
! AAGTACCTGCGTTTTTGTTA+TGG - chr4_1:68800571-68800590 Msa0567460:intron 35.0%
! GTCGTGTCTTTTAAATACAC+AGG + chr4_1:68800679-68800698 None:intergenic 35.0%
ACGACATCCCTAACAAATAA+AGG - chr4_1:68800694-68800713 Msa0567460:CDS 35.0%
ACATCCCTAACAAATAAAGG+TGG - chr4_1:68800697-68800716 Msa0567460:CDS 35.0%
! CTCACCACCTTTATTTGTTA+GGG + chr4_1:68800704-68800723 None:intergenic 35.0%
! TCTCACCACCTTTATTTGTT+AGG + chr4_1:68800705-68800724 None:intergenic 35.0%
TTACTTTCATTATCAGGGAG+AGG - chr4_1:68800856-68800875 Msa0567460:intron 35.0%
!!! GACTCTTTGTTTTGTTCCAA+CGG + chr4_1:68801075-68801094 None:intergenic 35.0%
!! AGCACTCATTGTTTTGTTCT+CGG + chr4_1:68801097-68801116 None:intergenic 35.0%
ACCTTCAATGAAAGATTCAC+TGG - chr4_1:68801127-68801146 Msa0567460:intron 35.0%
GAATACGATGGTGACAAATT+TGG - chr4_1:68801233-68801252 Msa0567460:intron 35.0%
ACCAGGTTAGGAAAAACTAT+GGG - chr4_1:68801558-68801577 Msa0567460:intron 35.0%
CTATGGGAAGATAATTTGGT+CGG - chr4_1:68801574-68801593 Msa0567460:intron 35.0%
!! AAATCAGAGGCTATTTCTGA+GGG - chr4_1:68801659-68801678 Msa0567460:intron 35.0%
!!! ACGATTTTTTGAAAGAAGGC+AGG - chr4_1:68801723-68801742 Msa0567460:CDS 35.0%
TTACAACATTCAACAACCTG+TGG + chr4_1:68801829-68801848 None:intergenic 35.0%
! GTCCTGATGATTTTGCATTA+TGG + chr4_1:68802064-68802083 None:intergenic 35.0%
GATCTTGCTTTACCTACAAA+AGG + chr4_1:68802165-68802184 None:intergenic 35.0%
! ATACTTGGAGGCATATACGA+AGG + chr4_1:68795867-68795886 None:intergenic 40.0%
!! TTGGATTGGTTGACAATAGG+TGG - chr4_1:68795973-68795992 Msa0567460:intron 40.0%
GAAAAGATGGACATAACTGG+AGG - chr4_1:68796037-68796056 Msa0567460:intron 40.0%
! AAGGCAGAAACTTTGAAGGA+GGG + chr4_1:68796755-68796774 None:intergenic 40.0%
TGTCTCCATCTCACACATAT+TGG - chr4_1:68796784-68796803 Msa0567460:three_prime_UTR 40.0%
GATGCATTTGTTCTTGCTTG+AGG - chr4_1:68796868-68796887 Msa0567460:three_prime_UTR 40.0%
!! TTTTTGGTGGTTCCTATCTC+TGG - chr4_1:68797001-68797020 Msa0567460:three_prime_UTR 40.0%
CATCGTTCTAGTCCATTATC+GGG - chr4_1:68797090-68797109 Msa0567460:three_prime_UTR 40.0%
ATACCTTCACTTCCCGATAA+TGG + chr4_1:68797105-68797124 None:intergenic 40.0%
!!! CTGATCAAGTTTTTTCCTCC+AGG - chr4_1:68797287-68797306 Msa0567460:intron 40.0%
! TTAAAGTTGCTTTGGTTCCC+TGG + chr4_1:68797308-68797327 None:intergenic 40.0%
CAAAGTTATGCCTAACACAG+AGG - chr4_1:68797377-68797396 Msa0567460:intron 40.0%
TTACCGTCTAGCATTAACAG+TGG - chr4_1:68797411-68797430 Msa0567460:intron 40.0%
TGACCACTGTTAATGCTAGA+CGG + chr4_1:68797417-68797436 None:intergenic 40.0%
GATAGGGGACAGTTAGAATA+AGG + chr4_1:68797706-68797725 None:intergenic 40.0%
CAAACTTAGTGACGTAGCAA+TGG - chr4_1:68797854-68797873 Msa0567460:three_prime_UTR 40.0%
TAAGATCTTGCCTGATCCAA+AGG + chr4_1:68797985-68798004 None:intergenic 40.0%
AGTAAGATATCATCCACCTG+AGG + chr4_1:68798075-68798094 None:intergenic 40.0%
! GTGTTATTGGGTTCTGTTTC+AGG + chr4_1:68798234-68798253 None:intergenic 40.0%
GAAACAGAACCCAATAACAC+GGG - chr4_1:68798234-68798253 Msa0567460:three_prime_UTR 40.0%
CTCAAGGATATGAGACAATG+GGG - chr4_1:68798271-68798290 Msa0567460:three_prime_UTR 40.0%
TTTATACCAGCTGAAGCTGA+AGG - chr4_1:68798339-68798358 Msa0567460:three_prime_UTR 40.0%
TGAAGGAAATTGGCAGGTAT+GGG - chr4_1:68798356-68798375 Msa0567460:three_prime_UTR 40.0%
GACTCACTACAAAGTGATGT+TGG - chr4_1:68798595-68798614 Msa0567460:intron 40.0%
ATTCTTTAAGCGCATCCACA+TGG - chr4_1:68798830-68798849 Msa0567460:three_prime_UTR 40.0%
CCTGAATAGGCACTATCTTT+GGG + chr4_1:68798856-68798875 None:intergenic 40.0%
ATGAAGAAGGAACTGTTCCA+AGG + chr4_1:68798944-68798963 None:intergenic 40.0%
GAGTGTCTTCTATTCCAACT+AGG + chr4_1:68799065-68799084 None:intergenic 40.0%
CGATGGATGAGTAAAGAACT+AGG - chr4_1:68799158-68799177 Msa0567460:CDS 40.0%
ATTCCCCTTCTAGTGCTTAT+TGG - chr4_1:68799204-68799223 Msa0567460:CDS 40.0%
TTCCCCTTCTAGTGCTTATT+GGG - chr4_1:68799205-68799224 Msa0567460:CDS 40.0%
ATCCCAATAAGCACTAGAAG+GGG + chr4_1:68799210-68799229 None:intergenic 40.0%
GTATCCCAATAAGCACTAGA+AGG + chr4_1:68799212-68799231 None:intergenic 40.0%
AGTCTTCAAATGCCCAACTT+GGG + chr4_1:68799352-68799371 None:intergenic 40.0%
AAGTTGGGCATTTGAAGACT+CGG - chr4_1:68799352-68799371 Msa0567460:intron 40.0%
CTAATCGAATCTAAATCCCG+AGG + chr4_1:68799953-68799972 None:intergenic 40.0%
GGCCCAAATGTATTAGATGA+AGG - chr4_1:68800169-68800188 Msa0567460:intron 40.0%
! CTTCATTTTGCAGCCTTTCT+TGG - chr4_1:68800205-68800224 Msa0567460:intron 40.0%
TTCACACCAGCAACAATTGT+TGG + chr4_1:68800250-68800269 None:intergenic 40.0%
GTGAACTTTCGCGATGTAAA+TGG - chr4_1:68800271-68800290 Msa0567460:intron 40.0%
ACTTTCGCGATGTAAATGGA+TGG - chr4_1:68800275-68800294 Msa0567460:intron 40.0%
! TAAATAATCGAAGGGGTGTG+TGG - chr4_1:68800734-68800753 Msa0567460:CDS 40.0%
! AAATAATCGAAGGGGTGTGT+GGG - chr4_1:68800735-68800754 Msa0567460:CDS 40.0%
TGGGCTATTTAAGCATACCT+CGG - chr4_1:68800754-68800773 Msa0567460:CDS 40.0%
ATTTAAGCATACCTCGGGAA+AGG - chr4_1:68800760-68800779 Msa0567460:CDS 40.0%
! TGGACTCTTTTCATGGGAAA+TGG + chr4_1:68800792-68800811 None:intergenic 40.0%
! TCACGTTGGACTCTTTTCAT+GGG + chr4_1:68800798-68800817 None:intergenic 40.0%
AAAAATCACGAGTCTCACGT+TGG + chr4_1:68800812-68800831 None:intergenic 40.0%
TTGCTTCCCTCATATCTCTT+GGG - chr4_1:68800883-68800902 Msa0567460:intron 40.0%
TTCTACCAGAAGGATGTTGT+GGG + chr4_1:68800938-68800957 None:intergenic 40.0%
AATGGACACAAAGGAATTGC+TGG - chr4_1:68800981-68801000 Msa0567460:CDS 40.0%
AGAAACATGAGAGAAACCGT+TGG - chr4_1:68801056-68801075 Msa0567460:intron 40.0%
GCCAGTGAATCTTTCATTGA+AGG + chr4_1:68801131-68801150 None:intergenic 40.0%
TTCAGAACAAGTTTCGCAGT+TGG - chr4_1:68801354-68801373 Msa0567460:intron 40.0%
AACAAGTTTCGCAGTTGGAA+GGG - chr4_1:68801359-68801378 Msa0567460:intron 40.0%
TTATTATAGGCTCACGTGAG+AGG - chr4_1:68801533-68801552 Msa0567460:intron 40.0%
CACCAGGTTAGGAAAAACTA+TGG - chr4_1:68801557-68801576 Msa0567460:intron 40.0%
! TCCCATAGTTTTTCCTAACC+TGG + chr4_1:68801562-68801581 None:intergenic 40.0%
GGAAGATAATTTGGTCGGTT+GGG - chr4_1:68801579-68801598 Msa0567460:intron 40.0%
! ATATTACGTTGGCGTCGAAA+AGG - chr4_1:68801617-68801636 Msa0567460:intron 40.0%
TTTGCGTGGATTCAAATCAG+AGG - chr4_1:68801646-68801665 Msa0567460:intron 40.0%
!! CAAATCAGAGGCTATTTCTG+AGG - chr4_1:68801658-68801677 Msa0567460:intron 40.0%
AAAATCGTAGTCATCCTCAG+TGG + chr4_1:68801711-68801730 None:intergenic 40.0%
GAAGCAAACTGAGAAAAGGT+TGG - chr4_1:68801745-68801764 Msa0567460:intron 40.0%
!! CATTGACTTCACTCTAGCAA+GGG + chr4_1:68801777-68801796 None:intergenic 40.0%
CATTCAACAACCTGTGGTAT+TGG + chr4_1:68801823-68801842 None:intergenic 40.0%
TATGGTTCAGCAGATGATTC+AGG + chr4_1:68802046-68802065 None:intergenic 40.0%
ACAATGCTTCAAGATCAACG+AGG + chr4_1:68802228-68802247 None:intergenic 40.0%
!! CGTTGATCTTGAAGCATTGT+TGG - chr4_1:68802228-68802247 Msa0567460:CDS 40.0%
GCTAATTTCTAAGTGGCTGT+AGG + chr4_1:68802271-68802290 None:intergenic 40.0%
GATGGACGCTAATTTCTAAG+TGG + chr4_1:68802278-68802297 None:intergenic 40.0%
GCGTCCATCCATAATATGTT+TGG - chr4_1:68802289-68802308 Msa0567460:CDS 40.0%
ACAATATCGATGGCTACGTC+CGG - chr4_1:68795788-68795807 Msa0567460:three_prime_UTR 45.0%
!! ATGTTTTCAGGCTGGAAGTG+TGG - chr4_1:68796320-68796339 Msa0567460:three_prime_UTR 45.0%
ACGAACTTACTGGATGCTTG+AGG - chr4_1:68796395-68796414 Msa0567460:three_prime_UTR 45.0%
! CAAGGCAGAAACTTTGAAGG+AGG + chr4_1:68796756-68796775 None:intergenic 45.0%
AGGCAAGGCAGAAACTTTGA+AGG + chr4_1:68796759-68796778 None:intergenic 45.0%
AGTCCATTATCGGGAAGTGA+AGG - chr4_1:68797099-68797118 Msa0567460:three_prime_UTR 45.0%
AACTGTCCCCTATCTCTCAA+AGG - chr4_1:68797712-68797731 Msa0567460:intron 45.0%
!! ATTCCGCAAATGTTGGCCTT+TGG - chr4_1:68797966-68797985 Msa0567460:three_prime_UTR 45.0%
GATCCAAAGGCCAACATTTG+CGG + chr4_1:68797972-68797991 None:intergenic 45.0%
!! CAAATGTTGGCCTTTGGATC+AGG - chr4_1:68797972-68797991 Msa0567460:three_prime_UTR 45.0%
CAATTTCCTTCAGCTTCAGC+TGG + chr4_1:68798348-68798367 None:intergenic 45.0%
CAGCTGAAGCTGAAGGAAAT+TGG - chr4_1:68798346-68798365 Msa0567460:three_prime_UTR 45.0%
TGAAGCTGAAGGAAATTGGC+AGG - chr4_1:68798350-68798369 Msa0567460:three_prime_UTR 45.0%
CTGAAGGAAATTGGCAGGTA+TGG - chr4_1:68798355-68798374 Msa0567460:three_prime_UTR 45.0%
CCCAAAGATAGTGCCTATTC+AGG - chr4_1:68798853-68798872 Msa0567460:three_prime_UTR 45.0%
GCCTGAATAGGCACTATCTT+TGG + chr4_1:68798857-68798876 None:intergenic 45.0%
GGGATCGATAAAAGCCTAGT+TGG - chr4_1:68799048-68799067 Msa0567460:CDS 45.0%
AAGTGTATCTGTGGCAGAAG+AGG - chr4_1:68799110-68799129 Msa0567460:CDS 45.0%
AGTGTATCTGTGGCAGAAGA+GGG - chr4_1:68799111-68799130 Msa0567460:CDS 45.0%
CAGTACAACTATTCCTTCCC+AGG - chr4_1:68799256-68799275 Msa0567460:intron 45.0%
ATAGTTCTCCAAGTGCACCT+GGG + chr4_1:68799276-68799295 None:intergenic 45.0%
GCACTTGGAGAACTATGTAC+TGG - chr4_1:68799280-68799299 Msa0567460:intron 45.0%
GTCTTCAAATGCCCAACTTG+GGG + chr4_1:68799351-68799370 None:intergenic 45.0%
GAGTCTTCAAATGCCCAACT+TGG + chr4_1:68799353-68799372 None:intergenic 45.0%
TATACACCTCAACACAAGGC+TGG - chr4_1:68799749-68799768 Msa0567460:CDS 45.0%
ACTCAAGAAGTCAACACTGC+CGG - chr4_1:68799851-68799870 Msa0567460:CDS 45.0%
! ATTGCTGCTTCTGATCTCAC+CGG + chr4_1:68799873-68799892 None:intergenic 45.0%
CAGTTCTTTGCTTGGTAGGA+AGG - chr4_1:68800006-68800025 Msa0567460:CDS 45.0%
TTGGTAGGAAGGACGATGAA+TGG - chr4_1:68800017-68800036 Msa0567460:CDS 45.0%
TGGTAGGAAGGACGATGAAT+GGG - chr4_1:68800018-68800037 Msa0567460:CDS 45.0%
GTATTAGATGAAGGTGGCCA+AGG - chr4_1:68800178-68800197 Msa0567460:intron 45.0%
CTGCAAAATGAAGCACACCT+TGG + chr4_1:68800198-68800217 None:intergenic 45.0%
AGCCTTTCTTGGCTACGATT+GGG - chr4_1:68800216-68800235 Msa0567460:intron 45.0%
!! ATGGATGGACTGCTCTTCAT+TGG - chr4_1:68800290-68800309 Msa0567460:intron 45.0%
!! TGGATGGACTGCTCTTCATT+GGG - chr4_1:68800291-68800310 Msa0567460:intron 45.0%
AATTGCACTCATCTTCCGTG+AGG - chr4_1:68800630-68800649 Msa0567460:CDS 45.0%
GGGCTATTTAAGCATACCTC+GGG - chr4_1:68800755-68800774 Msa0567460:CDS 45.0%
! CTCACGTTGGACTCTTTTCA+TGG + chr4_1:68800799-68800818 None:intergenic 45.0%
GTTGCTTCCCTCATATCTCT+TGG - chr4_1:68800882-68800901 Msa0567460:intron 45.0%
TGCTTCCCTCATATCTCTTG+GGG - chr4_1:68800884-68800903 Msa0567460:intron 45.0%
GTTCTACCAGAAGGATGTTG+TGG + chr4_1:68800939-68800958 None:intergenic 45.0%
TCCATTTGCAGAAGCTAGGT+CGG + chr4_1:68800967-68800986 None:intergenic 45.0%
TGTGTCCATTTGCAGAAGCT+AGG + chr4_1:68800971-68800990 None:intergenic 45.0%
GCTTCTGCAAATGGACACAA+AGG - chr4_1:68800972-68800991 Msa0567460:CDS 45.0%
AATGCGAAGTCACACAAGTC+TGG - chr4_1:68801293-68801312 Msa0567460:intron 45.0%
GAACAAGTTTCGCAGTTGGA+AGG - chr4_1:68801358-68801377 Msa0567460:intron 45.0%
GGGAAGATAATTTGGTCGGT+TGG - chr4_1:68801578-68801597 Msa0567460:intron 45.0%
AATTTGGTCGGTTGGGATTG+TGG - chr4_1:68801586-68801605 Msa0567460:intron 45.0%
!! GGCTATTTCTGAGGGAACTA+TGG - chr4_1:68801667-68801686 Msa0567460:intron 45.0%
TCTGAGGGAACTATGGTACA+AGG - chr4_1:68801674-68801693 Msa0567460:CDS 45.0%
AGGTGTATCATCTTCCACTG+AGG - chr4_1:68801694-68801713 Msa0567460:CDS 45.0%
GCAGGAAGCAAACTGAGAAA+AGG - chr4_1:68801741-68801760 Msa0567460:CDS 45.0%
!! CCATTGACTTCACTCTAGCA+AGG + chr4_1:68801778-68801797 None:intergenic 45.0%
CCTTGCTAGAGTGAAGTCAA+TGG - chr4_1:68801775-68801794 Msa0567460:intron 45.0%
!! TGGTATTGGTCTCTTGCATC+TGG + chr4_1:68801809-68801828 None:intergenic 45.0%
ATGCAAGAGACCAATACCAC+AGG - chr4_1:68801810-68801829 Msa0567460:intron 45.0%
GTTCAGCAGATGATTCAGGT+GGG + chr4_1:68802042-68802061 None:intergenic 45.0%
! AAAGACTGGCTAAGCTTTGC+TGG + chr4_1:68802134-68802153 None:intergenic 45.0%
GGAAGCTCATGAGAGACTCA+AGG - chr4_1:68796086-68796105 Msa0567460:intron 50.0%
TTACACTGCTACTACGCCCA+TGG - chr4_1:68796348-68796367 Msa0567460:three_prime_UTR 50.0%
TGTGAGATGGAGACAAAGCG+AGG + chr4_1:68796779-68796798 None:intergenic 50.0%
! AAGTTGCTTTGGTTCCCTGG+AGG + chr4_1:68797305-68797324 None:intergenic 50.0%
GAAGTCTCTGCCTCTGTGTT+AGG + chr4_1:68797390-68797409 None:intergenic 50.0%
AAGGTTGCCTGTCATTCCTC+AGG - chr4_1:68798056-68798075 Msa0567460:three_prime_UTR 50.0%
TCATCCACCTGAGGAATGAC+AGG + chr4_1:68798066-68798085 None:intergenic 50.0%
TTTCCTTGTGAACAGGCCTC+TGG - chr4_1:68798802-68798821 Msa0567460:three_prime_UTR 50.0%
AAACCAGAGGCCTGTTCACA+AGG + chr4_1:68798808-68798827 None:intergenic 50.0%
CTCACACGATGAGCCTGAAT+AGG + chr4_1:68798869-68798888 None:intergenic 50.0%
CTATTCAGGCTCATCGTGTG+AGG - chr4_1:68798867-68798886 Msa0567460:three_prime_UTR 50.0%
AGCTCGACAGTTTCAACCGA+TGG - chr4_1:68799141-68799160 Msa0567460:CDS 50.0%
TATTCCTTCCCAGGTGCACT+TGG - chr4_1:68799265-68799284 Msa0567460:intron 50.0%
CATAGTTCTCCAAGTGCACC+TGG + chr4_1:68799277-68799296 None:intergenic 50.0%
CAGCCTTTCTTGGCTACGAT+TGG - chr4_1:68800215-68800234 Msa0567460:intron 50.0%
! ATGGACTGCTCTTCATTGGG+CGG - chr4_1:68800294-68800313 Msa0567460:intron 50.0%
TGCTGCCCCAAGAGATATGA+GGG + chr4_1:68800892-68800911 None:intergenic 50.0%
CATGGATCAGTAAGTGCTCC+TGG + chr4_1:68800915-68800934 None:intergenic 50.0%
CGTGTTGCAGCAACATGAAC+AGG + chr4_1:68801332-68801351 None:intergenic 50.0%
GTCGGTTGGGATTGTGGAAA+AGG - chr4_1:68801592-68801611 Msa0567460:intron 50.0%
! CGAAAAGGTAGTGGTTTGCG+TGG - chr4_1:68801632-68801651 Msa0567460:intron 50.0%
GGTTCAGCAGATGATTCAGG+TGG + chr4_1:68802043-68802062 None:intergenic 50.0%
GATGGAGACAAAGCGAGGCA+AGG + chr4_1:68796774-68796793 None:intergenic 55.0%
GTTGCCTGTCATTCCTCAGG+TGG - chr4_1:68798059-68798078 Msa0567460:three_prime_UTR 55.0%
GGCACTATCTTTGGGCCATG+TGG + chr4_1:68798848-68798867 None:intergenic 55.0%
TTCTCCAAGTGCACCTGGGA+AGG + chr4_1:68799272-68799291 None:intergenic 55.0%
CACCTCAACACAAGGCTGGA+CGG - chr4_1:68799753-68799772 Msa0567460:CDS 55.0%
ACCTCAACACAAGGCTGGAC+GGG - chr4_1:68799754-68799773 Msa0567460:CDS 55.0%
CCGAGGGAAGTCATGCTCTT+GGG + chr4_1:68799936-68799955 None:intergenic 55.0%
! CCCAAGAGCATGACTTCCCT+CGG - chr4_1:68799933-68799952 Msa0567460:CDS 55.0%
! CCAAGAGCATGACTTCCCTC+GGG - chr4_1:68799934-68799953 Msa0567460:CDS 55.0%
GGCCCAATCGTAGCCAAGAA+AGG + chr4_1:68800221-68800240 None:intergenic 55.0%
! CTTCATTGGGCGGCGTTTTG+TGG - chr4_1:68800304-68800323 Msa0567460:intron 55.0%
GTGCTGCCCCAAGAGATATG+AGG + chr4_1:68800893-68800912 None:intergenic 55.0%
ATATCTCTTGGGGCAGCACC+AGG - chr4_1:68800894-68800913 Msa0567460:intron 55.0%
CCAGAAGGATGTTGTGGGCA+TGG + chr4_1:68800933-68800952 None:intergenic 55.0%
CCATGCCCACAACATCCTTC+TGG - chr4_1:68800930-68800949 Msa0567460:intron 55.0%
TCGGCTGGTGTTCTACCAGA+AGG + chr4_1:68800948-68800967 None:intergenic 55.0%
TTTGCAGAAGCTAGGTCGGC+TGG + chr4_1:68800963-68800982 None:intergenic 55.0%
GCCGACCTAGCTTCTGCAAA+TGG - chr4_1:68800963-68800982 Msa0567460:intron 55.0%
ACGTGAGAGGTCACCAGGTT+AGG - chr4_1:68801546-68801565 Msa0567460:intron 55.0%
! CGTTGGCGTCGAAAAGGTAG+TGG - chr4_1:68801623-68801642 Msa0567460:intron 55.0%
! ACCCGTCCAGCCTTGTGTTG+AGG + chr4_1:68799758-68799777 None:intergenic 60.0%
CCCGAGGGAAGTCATGCTCT+TGG + chr4_1:68799937-68799956 None:intergenic 60.0%
! ATTGGGCGGCGTTTTGTGGC+AGG - chr4_1:68800308-68800327 Msa0567460:intron 60.0%
AATGGCTCTCGCCTTTCCCG+AGG + chr4_1:68800774-68800793 None:intergenic 60.0%
GGCTCACGTGAGAGGTCACC+AGG - chr4_1:68801541-68801560 Msa0567460:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 68795729 68802361 68795729 ID=Msa0567460;Name=Msa0567460
chr4_1 mRNA 68795729 68802361 68795729 ID=Msa0567460-mRNA-1;Parent=Msa0567460;Name=Msa0567460-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|1|0.91|1|1|0.91|12|2019|439
chr4_1 exon 68795729 68795918 68795729 ID=Msa0567460-mRNA-1:exon:22846;Parent=Msa0567460-mRNA-1
chr4_1 exon 68796222 68796548 68796222 ID=Msa0567460-mRNA-1:exon:22845;Parent=Msa0567460-mRNA-1
chr4_1 exon 68796663 68797218 68796663 ID=Msa0567460-mRNA-1:exon:22844;Parent=Msa0567460-mRNA-1
chr4_1 exon 68797761 68798461 68797761 ID=Msa0567460-mRNA-1:exon:22843;Parent=Msa0567460-mRNA-1
chr4_1 exon 68798708 68799273 68798708 ID=Msa0567460-mRNA-1:exon:22842;Parent=Msa0567460-mRNA-1
chr4_1 exon 68799719 68800044 68799719 ID=Msa0567460-mRNA-1:exon:22841;Parent=Msa0567460-mRNA-1
chr4_1 exon 68800357 68800470 68800357 ID=Msa0567460-mRNA-1:exon:22840;Parent=Msa0567460-mRNA-1
chr4_1 exon 68800625 68800781 68800625 ID=Msa0567460-mRNA-1:exon:22839;Parent=Msa0567460-mRNA-1
chr4_1 exon 68800970 68801012 68800970 ID=Msa0567460-mRNA-1:exon:22838;Parent=Msa0567460-mRNA-1
chr4_1 exon 68801672 68801760 68801672 ID=Msa0567460-mRNA-1:exon:22837;Parent=Msa0567460-mRNA-1
chr4_1 exon 68801983 68802098 68801983 ID=Msa0567460-mRNA-1:exon:22836;Parent=Msa0567460-mRNA-1
chr4_1 exon 68802208 68802361 68802208 ID=Msa0567460-mRNA-1:exon:22835;Parent=Msa0567460-mRNA-1
chr4_1 CDS 68802208 68802361 68802208 ID=Msa0567460-mRNA-1:cds;Parent=Msa0567460-mRNA-1
chr4_1 CDS 68801983 68802098 68801983 ID=Msa0567460-mRNA-1:cds;Parent=Msa0567460-mRNA-1
chr4_1 CDS 68801672 68801760 68801672 ID=Msa0567460-mRNA-1:cds;Parent=Msa0567460-mRNA-1
chr4_1 CDS 68800970 68801012 68800970 ID=Msa0567460-mRNA-1:cds;Parent=Msa0567460-mRNA-1
chr4_1 CDS 68800625 68800781 68800625 ID=Msa0567460-mRNA-1:cds;Parent=Msa0567460-mRNA-1
chr4_1 CDS 68800357 68800470 68800357 ID=Msa0567460-mRNA-1:cds;Parent=Msa0567460-mRNA-1
chr4_1 CDS 68799719 68800044 68799719 ID=Msa0567460-mRNA-1:cds;Parent=Msa0567460-mRNA-1
chr4_1 CDS 68798953 68799273 68798953 ID=Msa0567460-mRNA-1:cds;Parent=Msa0567460-mRNA-1
chr4_1 three_prime_UTR 68798708 68798952 68798708 ID=Msa0567460-mRNA-1:three_prime_utr;Parent=Msa0567460-mRNA-1
chr4_1 three_prime_UTR 68797761 68798461 68797761 ID=Msa0567460-mRNA-1:three_prime_utr;Parent=Msa0567460-mRNA-1
chr4_1 three_prime_UTR 68796663 68797218 68796663 ID=Msa0567460-mRNA-1:three_prime_utr;Parent=Msa0567460-mRNA-1
chr4_1 three_prime_UTR 68796222 68796548 68796222 ID=Msa0567460-mRNA-1:three_prime_utr;Parent=Msa0567460-mRNA-1
chr4_1 three_prime_UTR 68795729 68795918 68795729 ID=Msa0567460-mRNA-1:three_prime_utr;Parent=Msa0567460-mRNA-1
Gene Sequence

>Msa0567460

ATGTCTAATTCATATACTATGATTGCCACAACAGATATTGAAGAAATTTTATTACAAGCACAATATCGATGGCTACGTCCGGCTGAAATTTGCCAAATTCTCACTAACTATAACAGCTTTCAGATTTCTTCGCAACCTTCGTATATGCCTCCAAGTGGTTCACTTTTCTTGTTTGATCGAAAGGTGACGAGATACTTTAGAAAAGATGGACATAACTGGAGGAAGAAAAAAGATGGAAAAACTGTTAGGGAAGCTCATGAGAGACTCAAGGCTGGAAGTGTGGAAGTATTACACTGCTACTACGCCCATGGAGAACAAAATGACAATTTTCAAAGACGAACTTACTGGATGCTTGAGGAGGAACTCTCACACATCGTTCTAGTCCATTATCGGGAAGTGAAGGGAACCAAAGCAACTTTAATATGTGCCAAAGAAAATGAAGAATCTAATCCTTGTGATCAACAAACATACAAAGTTATGCCTAACACAGAGGCAGAGACTTCTTTACCGTCTAGCATTAACAGTGGTCAAGCATCAGAATATGAAGAAGCTGAATCAGCATTCAATAGCCATGCAAATTCGGATTTCTACTCTTTTCTTGAGCTGCAACAGCCTGCTGTTCAAAAGATTAAAGCTCAACTCCCTTATTCTAACTGTCCCCTATCTCTCAAAGATGATCAGGAAAGGTTGCCTGTCATTCCTCAGGTGGATGATATCTTACTCAGTCAAGCTAATGATACCAAATACATTAACAATGTTGGATTGACATGTGAACTCTCAAAAGTTCTTGGCTTTTCATCATGGCAAGATATCTTAGAAAATAAGGCTGGAAGTCATAATGTGCCTTTTCAGTCTTTTCCTGAAACAGAACCCAATAACACGGGAATCAATAGTACTTCTCAAGGATATGAGACAATGGGGCAACATTTAACCATCAGCATTACTAAACAGTATGATAATAGAAGTTTTATACCAGCTGAAGCTGAAGGAAATTGGCAGGCCTCTGGTTTTAATTCTTTAAGCGCATCCACATGGCCCAAAGATAGTGCCTATTCAGGCTCATCGTGTGAGGTTAGTTATAGTGACAATGAGCAGGAAGTTAATGAAGTTGATTTTCAACAATCCTTGGAACAGTTCCTTCTTCATACACACCAACAAAACAAGGTTCTTATGCAAAATAGCCCTCATGAAATACTTTTAAAAGCAGAAGACAAGTTAAAATCAGATCTAGGGATCGATAAAAGCCTAGTTGGAATAGAAGACACTCATTTCACTTCAAAGAAGACTCTATTAAGTGTATCTGTGGCAGAAGAGGGCTGA
Protein sequence

>Msa0567460

MSNSYTMIATTDIEEILLQAQYRWLRPAEICQILTNYNSFQISSQPSYMPPSGSLFLFDRKVTRYFRKDGHNWRKKKDGKTVREAHERLKAGSVEVLHCYYAHGEQNDNFQRRTYWMLEEELSHIVLVHYREVKGTKATLICAKENEESNPCDQQTYKVMPNTEAETSLPSSINSGQASEYEEAESAFNSHANSDFYSFLELQQPAVQKIKAQLPYSNCPLSLKDDQERLPVIPQVDDILLSQANDTKYINNVGLTCELSKVLGFSSWQDILENKAGSHNVPFQSFPETEPNNTGINSTSQGYETMGQHLTISITKQYDNRSFIPAEAEGNWQASGFNSLSASTWPKDSAYSGSSCEVSYSDNEQEVNEVDFQQSLEQFLLHTHQQNKVLMQNSPHEILLKAEDKLKSDLGIDKSLVGIEDTHFTSKKTLLSVSVAEEG*