AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0703790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0703790 MtrunA17_Chr8g0382191 94.977 1075 54 0 12 1086 10 1084 0.0 2136
Msa0703790 MtrunA17_Chr2g0279141 45.586 1110 499 27 4 1085 6 1038 0.0 851
Msa0703790 MtrunA17_Chr4g0050401 50.665 677 276 11 436 1085 382 1027 0.0 636
Msa0703790 MtrunA17_Chr4g0050401 38.676 287 142 6 7 279 9 275 1.05e-49 191
Msa0703790 MtrunA17_Chr8g0382181 61.774 327 108 5 53 366 8 330 7.98e-122 382
Msa0703790 MtrunA17_Chr8g0382181 74.150 147 38 0 458 604 330 476 1.90e-65 229
Msa0703790 MtrunA17_Chr8g0377501 42.679 560 277 13 498 1040 402 934 2.47e-121 396
Msa0703790 MtrunA17_Chr8g0377501 46.392 194 85 4 12 199 15 195 5.00e-46 179
Msa0703790 MtrunA17_Chr3g0122351 39.855 552 294 9 503 1042 386 911 1.25e-103 348
Msa0703790 MtrunA17_Chr3g0122351 57.377 122 52 0 12 133 8 129 3.15e-42 167
Msa0703790 MtrunA17_Chr4g0068161 33.078 653 383 18 434 1073 310 921 2.74e-86 299
Msa0703790 MtrunA17_Chr4g0068161 53.147 143 64 1 12 151 26 168 1.34e-34 143
Msa0703790 MtrunA17_Chr2g0294711 33.065 620 370 14 434 1039 298 886 4.04e-84 293
Msa0703790 MtrunA17_Chr2g0294711 47.647 170 80 2 12 181 26 186 7.68e-41 163
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0703790 AT2G22300.2 47.477 1110 457 28 5 1082 7 1022 0.0 903
Msa0703790 AT2G22300.1 47.477 1110 457 28 5 1082 7 1022 0.0 903
Msa0703790 AT5G64220.1 45.513 1092 499 29 3 1067 5 1027 0.0 850
Msa0703790 AT5G64220.2 45.513 1092 499 29 3 1067 5 1027 0.0 850
Msa0703790 AT2G22300.3 47.448 1058 430 28 57 1082 1 964 0.0 843
Msa0703790 AT5G09410.4 49.629 673 291 14 436 1082 231 881 0.0 617
Msa0703790 AT5G09410.2 49.629 673 291 14 436 1082 352 1002 0.0 616
Msa0703790 AT5G09410.2 62.963 162 58 2 12 173 17 176 3.09e-57 215
Msa0703790 AT5G09410.1 49.629 673 291 14 436 1082 334 984 0.0 616
Msa0703790 AT5G09410.1 62.963 162 58 2 12 173 17 176 2.89e-57 215
Msa0703790 AT5G09410.3 49.629 673 291 14 436 1082 411 1061 0.0 616
Msa0703790 AT5G09410.3 53.125 192 58 3 12 173 76 265 5.33e-52 199
Msa0703790 AT1G67310.1 40.391 562 287 11 501 1040 442 977 5.33e-105 353
Msa0703790 AT1G67310.1 47.333 150 69 1 12 161 37 176 3.62e-39 158
Msa0703790 AT3G16940.3 32.154 622 369 14 434 1039 217 801 4.74e-79 277
Msa0703790 AT3G16940.3 55.645 124 55 0 16 139 1 124 3.83e-37 151
Msa0703790 AT3G16940.1 32.154 622 369 14 434 1039 244 828 7.21e-79 277
Msa0703790 AT3G16940.1 54.688 128 58 0 12 139 24 151 2.88e-38 155
Msa0703790 AT3G16940.2 30.667 525 319 13 434 942 244 739 1.81e-54 204
Msa0703790 AT3G16940.2 54.688 128 58 0 12 139 24 151 1.43e-38 155

Find 220 sgRNAs with CRISPR-Local

Find 400 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGTTATTGGGTTCTGTTTC+AGG 0.110677 4_4:+75821984 None:intergenic
TCCAACATTGTTAATGTATT+TGG 0.116953 4_4:+75822103 None:intergenic
GATAGGGGACAGTTAGAATA+AGG 0.169692 4_4:+75822534 None:intergenic
ATTCCCCTTCTAGTGCTTAT+TGG 0.214001 4_4:-75821004 Msa0703790:CDS
AGGGAGAAGTGCATATTATT+TGG 0.230772 4_4:+75817727 None:intergenic
TGTTATAGTTAGTGAGAATT+TGG 0.234871 4_4:+75824431 None:intergenic
GAATACGATGGTGACAAATT+TGG 0.239421 4_4:-75818972 Msa0703790:CDS
ATGAACAACCAAACATATTA+TGG 0.239719 4_4:+75817908 None:intergenic
GAAATTTACCTTTGAGAGAT+AGG 0.252450 4_4:+75822517 None:intergenic
ACTATTGATTCCCGTGTTAT+TGG 0.255860 4_4:+75821971 None:intergenic
TGTGAACTCTCAAAAGTTCT+TGG 0.257449 4_4:-75822074 Msa0703790:CDS
TCTACGTAACATGTTCTAAT+AGG 0.258394 4_4:-75820425 Msa0703790:CDS
GCAAGATATCTTAGAAAATA+AGG 0.263006 4_4:-75822039 Msa0703790:CDS
GCCTGAATAGGCACTATCTT+TGG 0.278496 4_4:+75821355 None:intergenic
TTCCCCTTCTAGTGCTTATT+GGG 0.285574 4_4:-75821003 Msa0703790:CDS
AGCAACAATTGTTGGTTCTA+AGG 0.288908 4_4:+75819969 None:intergenic
ATTTGAAGACTCGGAAATTA+AGG 0.297823 4_4:-75820847 Msa0703790:intron
AAAACTATGGGAAGATAATT+TGG 0.298279 4_4:-75818635 Msa0703790:CDS
CCACCTTCATCTAATACATT+TGG 0.299243 4_4:+75820036 None:intergenic
GTGAACTTTCGCGATGTAAA+TGG 0.307864 4_4:-75819937 Msa0703790:CDS
TTGGTTGTTCATTGTATGTA+TGG 0.312248 4_4:-75817897 Msa0703790:three_prime_UTR
ATACCTTCACTTCCCGATAA+TGG 0.312933 4_4:+75823146 None:intergenic
TGAAACTGTCGAGCTTCTTC+AGG 0.320899 4_4:+75821075 None:intergenic
CGTTGATCTTGAAGCATTGT+TGG 0.336518 4_4:-75817977 Msa0703790:CDS
TTGCTTCCCTCATATCTCTT+GGG 0.341997 4_4:-75819322 Msa0703790:CDS
CAGCCTTTCTTGGCTACGAT+TGG 0.345539 4_4:-75819993 Msa0703790:CDS
CCCAAAGATAGTGCCTATTC+AGG 0.346532 4_4:-75821356 Msa0703790:CDS
GATACAGTTGAAAGCGAAAA+TGG 0.348848 4_4:-75820981 Msa0703790:CDS
CAGCTGAAGCTGAAGGAAAT+TGG 0.351228 4_4:-75821869 Msa0703790:CDS
GACAAGTTAAAATCAGATCT+AGG 0.361350 4_4:-75821182 Msa0703790:CDS
CACCTTCATCTAATACATTT+GGG 0.362638 4_4:+75820037 None:intergenic
GGCATGCATTAAAGTTGCTT+TGG 0.362966 4_4:+75822925 None:intergenic
GGCTATTTCTGAGGGAACTA+TGG 0.368661 4_4:-75818538 Msa0703790:CDS
ATGAAGCAGAAGATTGTAAA+TGG 0.369204 4_4:-75820545 Msa0703790:CDS
GTCGGTTGGGATTGTGGAAA+AGG 0.373416 4_4:-75818613 Msa0703790:CDS
GTTGCTTCCCTCATATCTCT+TGG 0.375690 4_4:-75819323 Msa0703790:CDS
CTATTGATTCCCGTGTTATT+GGG 0.377443 4_4:+75821972 None:intergenic
ATTCAATAGCCATGCAAATT+CGG 0.381684 4_4:-75822616 Msa0703790:CDS
AGCTGATCATAGCAAATAGA+TGG 0.386884 4_4:+75820903 None:intergenic
GGTTAGATTGTAACATAATC+AGG 0.390531 4_4:-75817875 Msa0703790:three_prime_UTR
TGAAATTGTGATAGATGATC+AGG 0.393656 4_4:-75822183 Msa0703790:intron
GCGTCCATCCATAATATGTT+TGG 0.399301 4_4:-75817916 Msa0703790:three_prime_UTR
ATGGATGGACTGCTCTTCAT+TGG 0.403464 4_4:-75819918 Msa0703790:CDS
ACCAAATACATTAACAATGT+TGG 0.404096 4_4:-75822104 Msa0703790:CDS
TGGTATTGGTCTCTTGCATC+TGG 0.406003 4_4:+75818399 None:intergenic
CCATGCCCACAACATCCTTC+TGG 0.406110 4_4:-75819275 Msa0703790:CDS
TTAGAAAAGATGGACATAAC+TGG 0.406867 4_4:-75824218 Msa0703790:CDS
GGAAGATAATTTGGTCGGTT+GGG 0.407139 4_4:-75818626 Msa0703790:CDS
CATTCAACAACCTGTGGTAT+TGG 0.408725 4_4:+75818385 None:intergenic
ACGTGAGAGGTCACCAGGTT+AGG 0.411787 4_4:-75818659 Msa0703790:CDS
ACATCGTTCTAGTCCATTAT+CGG 0.412410 4_4:-75823159 Msa0703790:CDS
GTATCCCAATAAGCACTAGA+AGG 0.413133 4_4:+75820999 None:intergenic
AATTTGGTCGGTTGGGATTG+TGG 0.413549 4_4:-75818619 Msa0703790:CDS
GCCGACCTAGCTTCTGCAAA+TGG 0.416041 4_4:-75819242 Msa0703790:CDS
TTTCCTTGTGAACAGGCCTC+TGG 0.421100 4_4:-75821407 Msa0703790:intron
TTCACACCAGCAACAATTGT+TGG 0.422507 4_4:+75819961 None:intergenic
CTTCAGAAAACAACTGAAGA+TGG 0.424083 4_4:-75820066 Msa0703790:CDS
TTAGAACCAACAATTGTTGC+TGG 0.425908 4_4:-75819967 Msa0703790:CDS
CCTGAATAGGCACTATCTTT+GGG 0.427656 4_4:+75821356 None:intergenic
CATAGTTCTCCAAGTGCACC+TGG 0.428531 4_4:+75820934 None:intergenic
AACTGAGATACAAGAAAATC+AGG 0.429890 4_4:-75818358 Msa0703790:intron
GAATATGAAGAAGCTGAATC+AGG 0.434942 4_4:-75822794 Msa0703790:intron
CATTGATTATTCCCCAAGTT+GGG 0.435352 4_4:-75820871 Msa0703790:CDS
ATAGGGGACAGTTAGAATAA+GGG 0.437858 4_4:+75822535 None:intergenic
GGGAAGATAATTTGGTCGGT+TGG 0.442560 4_4:-75818627 Msa0703790:CDS
GCCAGTGAATCTTTCATTGA+AGG 0.442930 4_4:+75819077 None:intergenic
CAATTTCCTTCAGCTTCAGC+TGG 0.443285 4_4:+75821870 None:intergenic
CGTGTTGCAGCAACATGAAC+AGG 0.444655 4_4:+75818876 None:intergenic
AAATTTACCTTTGAGAGATA+GGG 0.446563 4_4:+75822518 None:intergenic
AGTTGATCATGTACAAGTTC+TGG 0.447402 4_4:+75820129 None:intergenic
AATGCGAAGTCACACAAGTC+TGG 0.449069 4_4:-75818912 Msa0703790:CDS
TCATTGATTATTCCCCAAGT+TGG 0.450073 4_4:-75820872 Msa0703790:CDS
TATTCCTTCCCAGGTGCACT+TGG 0.450888 4_4:-75820943 Msa0703790:CDS
ACAACAGAGAACACTATTCC+TGG 0.452005 4_4:+75820482 None:intergenic
AGCCTTTCTTGGCTACGATT+GGG 0.452371 4_4:-75819992 Msa0703790:CDS
TGTAAATGGTCATGCATGTT+CGG 0.458202 4_4:-75820531 Msa0703790:CDS
GAGTCTTCAAATGCCCAACT+TGG 0.460974 4_4:+75820858 None:intergenic
AGTAAAATCAGTTCTTTGCT+TGG 0.461341 4_4:-75820210 Msa0703790:CDS
CAGTTCTTTGCTTGGTAGGA+AGG 0.462643 4_4:-75820202 Msa0703790:CDS
TTAGAACATGTTACGTAGAA+AGG 0.466234 4_4:+75820429 None:intergenic
AATGGACACAAAGGAATTGC+TGG 0.466727 4_4:-75819224 Msa0703790:CDS
ATATTACGTTGGCGTCGAAA+AGG 0.469061 4_4:-75818588 Msa0703790:CDS
ACGAGATACTTTAGAAAAGA+TGG 0.469912 4_4:-75824228 Msa0703790:CDS
GAAGTCTCTGCCTCTGTGTT+AGG 0.470588 4_4:+75822851 None:intergenic
ACCTCAACACAAGGCTGGAC+GGG 0.474522 4_4:-75820454 Msa0703790:CDS
TCTCAAGGATATGAGACAAT+GGG 0.476448 4_4:-75821945 Msa0703790:CDS
CCCGAGGGAAGTCATGCTCT+TGG 0.481194 4_4:+75820274 None:intergenic
ATATCTCTTGGGGCAGCACC+AGG 0.481476 4_4:-75819311 Msa0703790:CDS
ATTCCAGAGAAAACAACAAA+AGG 0.481483 4_4:-75818994 Msa0703790:CDS
CCCAAGAGCATGACTTCCCT+CGG 0.481534 4_4:-75820275 Msa0703790:CDS
TGGATGGACTGCTCTTCATT+GGG 0.482883 4_4:-75819917 Msa0703790:CDS
CCGAGGGAAGTCATGCTCTT+GGG 0.487143 4_4:+75820275 None:intergenic
GGGATCGATAAAAGCCTAGT+TGG 0.487311 4_4:-75821161 Msa0703790:CDS
CTCACACGATGAGCCTGAAT+AGG 0.489940 4_4:+75821343 None:intergenic
CTAGTTCTTTACTCATCCAT+CGG 0.491817 4_4:+75821051 None:intergenic
GGCTCACGTGAGAGGTCACC+AGG 0.496633 4_4:-75818664 Msa0703790:CDS
GTTTCAGGAAAAGACTGAAA+AGG 0.498768 4_4:+75821999 None:intergenic
TGCTTCCCTCATATCTCTTG+GGG 0.499217 4_4:-75819321 Msa0703790:CDS
TTGGTAGGAAGGACGATGAA+TGG 0.501312 4_4:-75820191 Msa0703790:CDS
AAATCAGTTCTTTGCTTGGT+AGG 0.505479 4_4:-75820206 Msa0703790:CDS
CGTTGGCGTCGAAAAGGTAG+TGG 0.510926 4_4:-75818582 Msa0703790:CDS
TTCAGAACAAGTTTCGCAGT+TGG 0.512320 4_4:-75818851 Msa0703790:CDS
AGTCTTCAAATGCCCAACTT+GGG 0.512638 4_4:+75820859 None:intergenic
CCAGAAGGATGTTGTGGGCA+TGG 0.516822 4_4:+75819275 None:intergenic
TGGTTGTTCATTGTATGTAT+GGG 0.517220 4_4:-75817896 Msa0703790:three_prime_UTR
ACCTTCAATGAAAGATTCAC+TGG 0.517231 4_4:-75819078 Msa0703790:CDS
TTTGTTGGTGTGTATGAAGA+AGG 0.517240 4_4:+75821255 None:intergenic
AATTTCTTCAATATCTGTTG+TGG 0.517632 4_4:+75824498 None:intergenic
AAGGTTGCCTGTCATTCCTC+AGG 0.518272 4_4:-75822159 Msa0703790:CDS
CATGGATCAGTAAGTGCTCC+TGG 0.519816 4_4:+75819293 None:intergenic
TGGTAGGAAGGACGATGAAT+GGG 0.520017 4_4:-75820190 Msa0703790:CDS
CAGTACAACTATTCCTTCCC+AGG 0.520858 4_4:-75820952 Msa0703790:CDS
GAACAAGTTTCGCAGTTGGA+AGG 0.521020 4_4:-75818847 Msa0703790:CDS
CATCGTTCTAGTCCATTATC+GGG 0.523240 4_4:-75823158 Msa0703790:CDS
CTTCTTGAGTATAATTGACT+CGG 0.525223 4_4:+75820370 None:intergenic
TGTGTCCATTTGCAGAAGCT+AGG 0.527068 4_4:+75819237 None:intergenic
GGCCCAATCGTAGCCAAGAA+AGG 0.527167 4_4:+75819990 None:intergenic
GATATCTTAGAAAATAAGGC+TGG 0.527732 4_4:-75822035 Msa0703790:CDS
TAGTTATAGTGACAATGAGC+AGG 0.528100 4_4:-75821318 Msa0703790:CDS
ACAAGTTAAAATCAGATCTA+GGG 0.529700 4_4:-75821181 Msa0703790:CDS
TTCAGAAAACAACTGAAGAT+GGG 0.530144 4_4:-75820065 Msa0703790:CDS
AAGTGCCGGCAGAGATAACC+AGG 0.530702 4_4:-75820500 Msa0703790:CDS
TTCTCCAAGTGCACCTGGGA+AGG 0.531264 4_4:+75820939 None:intergenic
CTATTCCTGGTTATCTCTGC+CGG 0.532774 4_4:+75820495 None:intergenic
GGCCCAAATGTATTAGATGA+AGG 0.533133 4_4:-75820039 Msa0703790:CDS
GCACTTGGAGAACTATGTAC+TGG 0.534994 4_4:-75820928 Msa0703790:CDS
TTCTACCAGAAGGATGTTGT+GGG 0.536843 4_4:+75819270 None:intergenic
CAAATCAGAGGCTATTTCTG+AGG 0.541683 4_4:-75818547 Msa0703790:CDS
GTGCTGCCCCAAGAGATATG+AGG 0.541703 4_4:+75819315 None:intergenic
AACAAGTTTCGCAGTTGGAA+GGG 0.542396 4_4:-75818846 Msa0703790:CDS
CACCTCAACACAAGGCTGGA+CGG 0.542743 4_4:-75820455 Msa0703790:CDS
AGCTCGACAGTTTCAACCGA+TGG 0.542906 4_4:-75821067 Msa0703790:CDS
ACCCGTCCAGCCTTGTGTTG+AGG 0.545426 4_4:+75820453 None:intergenic
TCATCCACCTGAGGAATGAC+AGG 0.545608 4_4:+75822152 None:intergenic
TATTACAAGCACAATATCGA+TGG 0.548796 4_4:-75824474 Msa0703790:CDS
GAGTGTCTTCTATTCCAACT+AGG 0.550195 4_4:+75821147 None:intergenic
AGTGTATCTGTGGCAGAAGA+GGG 0.550559 4_4:-75821098 Msa0703790:CDS
TTTGCAGAAGCTAGGTCGGC+TGG 0.551088 4_4:+75819245 None:intergenic
AGAATTTGGCAAATTTCAGC+CGG 0.551681 4_4:+75824445 None:intergenic
TGAAGCTGAAGGAAATTGGC+AGG 0.551960 4_4:-75821865 Msa0703790:intron
TGGAAAAGGTTATATTACGT+TGG 0.554077 4_4:-75818599 Msa0703790:CDS
TATCCCAATAAGCACTAGAA+GGG 0.554536 4_4:+75821000 None:intergenic
AATTTACCTTTGAGAGATAG+GGG 0.555076 4_4:+75822519 None:intergenic
CGATGGATGAGTAAAGAACT+AGG 0.555800 4_4:-75821050 Msa0703790:CDS
AAGTGTATCTGTGGCAGAAG+AGG 0.556458 4_4:-75821099 Msa0703790:CDS
TTTATACCAGCTGAAGCTGA+AGG 0.559293 4_4:-75821876 Msa0703790:CDS
GCAGGAAGCAAACTGAGAAA+AGG 0.561949 4_4:-75818464 Msa0703790:CDS
GTATTAGATGAAGGTGGCCA+AGG 0.562370 4_4:-75820030 Msa0703790:CDS
ACAACCAAACATATTATGGA+TGG 0.563921 4_4:+75817912 None:intergenic
AAATCAGAGGCTATTTCTGA+GGG 0.564813 4_4:-75818546 Msa0703790:CDS
ACAATATCGATGGCTACGTC+CGG 0.566740 4_4:-75824464 Msa0703790:CDS
TTGTATGTTTGTTGATCACA+AGG 0.569291 4_4:+75822881 None:intergenic
AAGTTGGGCATTTGAAGACT+CGG 0.569405 4_4:-75820856 Msa0703790:CDS
CTGCAAAATGAAGCACACCT+TGG 0.570206 4_4:+75820013 None:intergenic
TCCATTTGCAGAAGCTAGGT+CGG 0.576737 4_4:+75819241 None:intergenic
GTCTTCAAATGCCCAACTTG+GGG 0.578425 4_4:+75820860 None:intergenic
TATACACCTCAACACAAGGC+TGG 0.578694 4_4:-75820459 Msa0703790:CDS
ATACTGTTTAGTAATGCTGA+TGG 0.578753 4_4:+75821911 None:intergenic
GCTAATTTCTAAGTGGCTGT+AGG 0.578993 4_4:+75817937 None:intergenic
AACTGTCCCCTATCTCTCAA+AGG 0.580934 4_4:-75822525 Msa0703790:intron
GGCACTATCTTTGGGCCATG+TGG 0.581003 4_4:+75821364 None:intergenic
GGAATCAATAGTACTTCTCA+AGG 0.582466 4_4:-75821960 Msa0703790:CDS
CCAAGAGCATGACTTCCCTC+GGG 0.583296 4_4:-75820274 Msa0703790:CDS
GTTCGGCGAGATAGAAGTGC+CGG 0.585098 4_4:-75820514 Msa0703790:CDS
CTATGGGAAGATAATTTGGT+CGG 0.585590 4_4:-75818631 Msa0703790:CDS
TCATACACACCAACAAAACA+AGG 0.587677 4_4:-75821249 Msa0703790:CDS
GAAGCAAACTGAGAAAAGGT+TGG 0.588658 4_4:-75818460 Msa0703790:CDS
TTCTCAAGGATATGAGACAA+TGG 0.588805 4_4:-75821946 Msa0703790:CDS
TGCTGCCCCAAGAGATATGA+GGG 0.589348 4_4:+75819316 None:intergenic
GTTCTACCAGAAGGATGTTG+TGG 0.592131 4_4:+75819269 None:intergenic
TTATTATAGGCTCACGTGAG+AGG 0.593673 4_4:-75818672 Msa0703790:intron
AGTAGAAATCCGAATTTGCA+TGG 0.594305 4_4:+75822607 None:intergenic
TAAAAGATAAACTACATGCA+TGG 0.594674 4_4:-75820092 Msa0703790:CDS
CCATTGACTTCACTCTAGCA+AGG 0.595945 4_4:+75818430 None:intergenic
TTGCACTGCTACTACGCCCA+TGG 0.597003 4_4:-75823899 Msa0703790:CDS
CGAAAAGGTAGTGGTTTGCG+TGG 0.599858 4_4:-75818573 Msa0703790:CDS
CATTGACTTCACTCTAGCAA+GGG 0.600713 4_4:+75818431 None:intergenic
CCTTGCTAGAGTGAAGTCAA+TGG 0.603870 4_4:-75818430 Msa0703790:CDS
TTGTTATACACCTCAACACA+AGG 0.604166 4_4:-75820463 Msa0703790:CDS
ATTCTTTAAGCGCATCCACA+TGG 0.606620 4_4:-75821379 Msa0703790:CDS
AGAAACATGAGAGAAACCGT+TGG 0.609159 4_4:-75819149 Msa0703790:CDS
GACTCTATTAAGTGTATCTG+TGG 0.611735 4_4:-75821108 Msa0703790:CDS
ATTGCTGCTTCTGATCTCAC+CGG 0.611990 4_4:+75820338 None:intergenic
ACTCAAGAAGTCAACACTGC+CGG 0.614091 4_4:-75820357 Msa0703790:CDS
AGTCCATTATCGGGAAGTGA+AGG 0.615277 4_4:-75823149 Msa0703790:intron
TCGGCTGGTGTTCTACCAGA+AGG 0.617785 4_4:+75819260 None:intergenic
TTGTGATAGATGATCAGGAA+AGG 0.618020 4_4:-75822178 Msa0703790:intron
GTTGCCTGTCATTCCTCAGG+TGG 0.619752 4_4:-75822156 Msa0703790:CDS
CTATTCAGGCTCATCGTGTG+AGG 0.626917 4_4:-75821342 Msa0703790:CDS
ATGAAGAAGGAACTGTTCCA+AGG 0.628051 4_4:+75821268 None:intergenic
ACTTTCGCGATGTAAATGGA+TGG 0.628820 4_4:-75819933 Msa0703790:CDS
TCTGAGGGAACTATGGTACA+AGG 0.629731 4_4:-75818531 Msa0703790:CDS
GATGGACGCTAATTTCTAAG+TGG 0.633815 4_4:+75817930 None:intergenic
TGACCACTGTTAATGCTAGA+CGG 0.638659 4_4:+75822824 None:intergenic
ATCCCAATAAGCACTAGAAG+GGG 0.640484 4_4:+75821001 None:intergenic
GCTTCTGCAAATGGACACAA+AGG 0.643597 4_4:-75819233 Msa0703790:CDS
GGAAGCTCATGAGAGACTCA+AGG 0.645990 4_4:-75824166 Msa0703790:intron
TGAAACAGAACCCAATAACA+CGG 0.650306 4_4:-75821982 Msa0703790:CDS
AAAACAACTGAAGATGGGAA+AGG 0.651527 4_4:-75820060 Msa0703790:CDS
TAATCGAATCTAAATCCCGA+GGG 0.653442 4_4:+75820259 None:intergenic
CCAAATGTATTAGATGAAGG+TGG 0.656043 4_4:-75820036 Msa0703790:CDS
ATGCAAGAGACCAATACCAC+AGG 0.658465 4_4:-75818395 Msa0703790:CDS
CTAATCGAATCTAAATCCCG+AGG 0.658480 4_4:+75820258 None:intergenic
GAAACAGAACCCAATAACAC+GGG 0.662228 4_4:-75821981 Msa0703790:CDS
ACGAACTTACTGGATGCTTG+AGG 0.663844 4_4:-75823852 Msa0703790:CDS
TTACCGTCTAGCATTAACAG+TGG 0.677007 4_4:-75822827 Msa0703790:CDS
GAAAAGATGGACATAACTGG+AGG 0.677852 4_4:-75824215 Msa0703790:CDS
ATGGACTGCTCTTCATTGGG+CGG 0.678377 4_4:-75819914 Msa0703790:CDS
AAACAACAAAAGGAATACGA+TGG 0.685779 4_4:-75818984 Msa0703790:CDS
TTTGCGTGGATTCAAATCAG+AGG 0.685933 4_4:-75818559 Msa0703790:CDS
TTACAACATTCAACAACCTG+TGG 0.686006 4_4:+75818379 None:intergenic
AAAATCGTAGTCATCCTCAG+TGG 0.687131 4_4:+75818497 None:intergenic
ATAGTTCTCCAAGTGCACCT+GGG 0.691663 4_4:+75820935 None:intergenic
CTCAAGGATATGAGACAATG+GGG 0.695507 4_4:-75821944 Msa0703790:CDS
ATACTTGGAGGCATATACGA+AGG 0.704350 4_4:+75824388 None:intergenic
GCTTAAAGAATTAAAACCAG+AGG 0.714724 4_4:+75821391 None:intergenic
CAAAGTTATGCCTAACACAG+AGG 0.717841 4_4:-75822861 Msa0703790:CDS
AGTAAGATATCATCCACCTG+AGG 0.729515 4_4:+75822143 None:intergenic
AGGTGTATCATCTTCCACTG+AGG 0.765631 4_4:-75818511 Msa0703790:CDS
ACAATGCTTCAAGATCAACG+AGG 0.891821 4_4:+75817980 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATAATTTATAATCCT+TGG - chr4_4:75818500-75818519 Msa0703790:CDS 10.0%
!!! AAATTATTTAGTTTTAAATC+AGG - chr4_4:75820548-75820567 Msa0703790:CDS 10.0%
!! AAAAAGTTATTAAAAAAACA+TGG - chr4_4:75821557-75821576 Msa0703790:intron 10.0%
!!! AACATATCTTTCTAATTTTA+CGG - chr4_4:75818277-75818296 Msa0703790:intron 15.0%
!!! GAAATTGCTAATTTTTTTTT+TGG - chr4_4:75818992-75819011 Msa0703790:CDS 15.0%
!! GAAGAATAAAAAAATAAAGA+AGG + chr4_4:75819565-75819584 None:intergenic 15.0%
!! ATATTAAAATAGATACAAGA+AGG + chr4_4:75819594-75819613 None:intergenic 15.0%
!!! TTTCAATTTTACAATTAGTA+TGG + chr4_4:75820057-75820076 None:intergenic 15.0%
!!! TTTTATGAATTGTGATGTTT+TGG - chr4_4:75817957-75817976 Msa0703790:CDS 20.0%
!! GTTACAACTTTAATCTAAAT+TGG - chr4_4:75818166-75818185 Msa0703790:intron 20.0%
!! TCATATGTTATTCAATGTAA+TGG + chr4_4:75818309-75818328 None:intergenic 20.0%
!! TGATTAATAAAATTCCGTTA+AGG - chr4_4:75818549-75818568 Msa0703790:CDS 20.0%
!!! GTATAAGTTGTTATTACAAT+TGG + chr4_4:75818667-75818686 None:intergenic 20.0%
!!! ATTGCTAATTTTTTTTTTGG+TGG - chr4_4:75818995-75819014 Msa0703790:CDS 20.0%
!! ACATTCTTAGTAACAATTTA+AGG - chr4_4:75819211-75819230 Msa0703790:CDS 20.0%
!!! GAATACCTATATTACTTTTA+AGG + chr4_4:75819285-75819304 None:intergenic 20.0%
!!! ATTAGATTCTTCATTTTCTT+TGG + chr4_4:75819354-75819373 None:intergenic 20.0%
!!! CAACAATTTATTTTGATGTA+CGG - chr4_4:75819779-75819798 Msa0703790:intron 20.0%
!! TTTATATATTCCGATAATGT+TGG - chr4_4:75819999-75820018 Msa0703790:CDS 20.0%
!!! AAAAATTTAAAGACTAGTCA+AGG - chr4_4:75820731-75820750 Msa0703790:intron 20.0%
!!! CTTTTAAAAGTATTTCATGA+GGG + chr4_4:75821048-75821067 None:intergenic 20.0%
!!! ACTACTAATATCAATTTTAC+AGG - chr4_4:75821654-75821673 Msa0703790:intron 20.0%
!!! GATACTTTTAATAAACGATT+TGG - chr4_4:75821946-75821965 Msa0703790:CDS 20.0%
!!! TGATTTTTCAATTTTCATTG+AGG - chr4_4:75822874-75822893 Msa0703790:CDS 20.0%
!! ATAATAAGTTAGAGGATTAA+AGG + chr4_4:75823570-75823589 None:intergenic 20.0%
!! TTAATCCTCTAACTTATTAT+AGG - chr4_4:75823570-75823589 Msa0703790:intron 20.0%
!! AAAACATATAGTGTGAAATT+TGG + chr4_4:75823965-75823984 None:intergenic 20.0%
!!! TTACTAGTTTATCAGAAATA+CGG - chr4_4:75824030-75824049 Msa0703790:intron 20.0%
!! AATTAAATGATATTAACTGC+TGG + chr4_4:75824147-75824166 None:intergenic 20.0%
!! TGTAGTTAAAAAGAAATTGT+AGG - chr4_4:75824454-75824473 Msa0703790:CDS 20.0%
!! GTAGTTAAAAAGAAATTGTA+GGG - chr4_4:75824455-75824474 Msa0703790:CDS 20.0%
! AATTTCTTCAATATCTGTTG+TGG + chr4_4:75817760-75817779 None:intergenic 25.0%
! TGTTATAGTTAGTGAGAATT+TGG + chr4_4:75817827-75817846 None:intergenic 25.0%
! GAATCAGAATTAATCATACT+TGG + chr4_4:75817885-75817904 None:intergenic 25.0%
! AAAAAGATGGAAAAACTGTT+AGG - chr4_4:75818067-75818086 Msa0703790:intron 25.0%
! AAAAGATGGAAAAACTGTTA+GGG - chr4_4:75818068-75818087 Msa0703790:intron 25.0%
!! ATACCTAAGGTTTTTATCTT+AGG + chr4_4:75818139-75818158 None:intergenic 25.0%
! AATGTCATTAAAATCAATCC+TGG - chr4_4:75818231-75818250 Msa0703790:intron 25.0%
! ATTAAAATCAATCCTGGAAT+AGG - chr4_4:75818237-75818256 Msa0703790:intron 25.0%
!! GAATAACATATGATGTTTTC+AGG - chr4_4:75818316-75818335 Msa0703790:intron 25.0%
! TTTAGTGTGAGATTTGAAAA+TGG + chr4_4:75818447-75818466 None:intergenic 25.0%
! TAGAATTACATGCTTTAACT+AGG + chr4_4:75818962-75818981 None:intergenic 25.0%
!!! ACATATAATTTTTCAGTGCT+TGG - chr4_4:75819249-75819268 Msa0703790:CDS 25.0%
!! AAATTTACCTTTGAGAGATA+GGG + chr4_4:75819740-75819759 None:intergenic 25.0%
! TACATGATTGATCGATAAAA+GGG + chr4_4:75819834-75819853 None:intergenic 25.0%
! ATACATGATTGATCGATAAA+AGG + chr4_4:75819835-75819854 None:intergenic 25.0%
!!! TCTAGAATAGAATTTTACTG+CGG + chr4_4:75819946-75819965 None:intergenic 25.0%
! ACCAAATACATTAACAATGT+TGG - chr4_4:75820151-75820170 Msa0703790:CDS 25.0%
! TCCAACATTGTTAATGTATT+TGG + chr4_4:75820155-75820174 None:intergenic 25.0%
! GCAAGATATCTTAGAAAATA+AGG - chr4_4:75820216-75820235 Msa0703790:CDS 25.0%
!!! GCTTTTAAAAGTATTTCATG+AGG + chr4_4:75821049-75821068 None:intergenic 25.0%
! ACAAGTTAAAATCAGATCTA+GGG - chr4_4:75821074-75821093 Msa0703790:CDS 25.0%
! TTAAAAAAACATGGTATCCA+TGG - chr4_4:75821566-75821585 Msa0703790:intron 25.0%
! TAAAAGATAAACTACATGCA+TGG - chr4_4:75822163-75822182 Msa0703790:CDS 25.0%
! TGACAATACATGAAACTAAT+AGG - chr4_4:75822447-75822466 Msa0703790:intron 25.0%
! CTGTATAAAATATGTGAAAC+AGG - chr4_4:75822513-75822532 Msa0703790:intron 25.0%
! AATATGCTTCATTTCATCAT+AGG - chr4_4:75822577-75822596 Msa0703790:CDS 25.0%
! ATATGCTTCATTTCATCATA+GGG - chr4_4:75822578-75822597 Msa0703790:CDS 25.0%
!!! TATTATTTTAGCATACCTCA+CGG + chr4_4:75822698-75822717 None:intergenic 25.0%
! TGCTCATTTAAATAATCGAA+GGG - chr4_4:75822776-75822795 Msa0703790:intron 25.0%
!! TGCATTTTACTTTCATTATC+AGG - chr4_4:75822900-75822919 Msa0703790:CDS 25.0%
!! GCATTTTACTTTCATTATCA+GGG - chr4_4:75822901-75822920 Msa0703790:CDS 25.0%
! TTTGTACATAATTCATGCAA+AGG + chr4_4:75823499-75823518 None:intergenic 25.0%
! AAAACTATGGGAAGATAATT+TGG - chr4_4:75823620-75823639 Msa0703790:intron 25.0%
!! TACTAGTTTATCAGAAATAC+GGG - chr4_4:75824031-75824050 Msa0703790:intron 25.0%
! ATGAACAACCAAACATATTA+TGG + chr4_4:75824350-75824369 None:intergenic 25.0%
!! TGATTCAAGATTTTTCTACA+AGG + chr4_4:75824424-75824443 None:intergenic 25.0%
TATTACAAGCACAATATCGA+TGG - chr4_4:75817781-75817800 Msa0703790:three_prime_UTR 30.0%
TCAGAATTAATCATACTTGG+AGG + chr4_4:75817882-75817901 None:intergenic 30.0%
!! TGAATTGTGATGTTTTGGAT+TGG - chr4_4:75817962-75817981 Msa0703790:CDS 30.0%
!! ACTTTTCTTGTTTGATCGAA+AGG - chr4_4:75818002-75818021 Msa0703790:CDS 30.0%
! ACGAGATACTTTAGAAAAGA+TGG - chr4_4:75818027-75818046 Msa0703790:CDS 30.0%
TTAGAAAAGATGGACATAAC+TGG - chr4_4:75818037-75818056 Msa0703790:intron 30.0%
CAACCTAAGATAAAAACCTT+AGG - chr4_4:75818133-75818152 Msa0703790:intron 30.0%
TGTAACTGTAACAATACCTA+AGG + chr4_4:75818152-75818171 None:intergenic 30.0%
TTCAGTTTATTTCCTATTCC+AGG + chr4_4:75818252-75818271 None:intergenic 30.0%
!!! ATTGTCATTTTGTTCTCCAT+GGG + chr4_4:75818375-75818394 None:intergenic 30.0%
!!! AATTGTCATTTTGTTCTCCA+TGG + chr4_4:75818376-75818395 None:intergenic 30.0%
! ATTTTCAAAGACGAACTTAC+TGG - chr4_4:75818393-75818412 Msa0703790:CDS 30.0%
ATCCTTGGTTTATAACTAAG+TGG - chr4_4:75818515-75818534 Msa0703790:CDS 30.0%
AACCACTTAGTTATAAACCA+AGG + chr4_4:75818520-75818539 None:intergenic 30.0%
TTGGTTTATAACTAAGTGGT+TGG - chr4_4:75818519-75818538 Msa0703790:CDS 30.0%
! AGTTGTTATTACAATTGGAG+AGG + chr4_4:75818662-75818681 None:intergenic 30.0%
TTTGTATTCGACATTGTTAC+AGG - chr4_4:75819063-75819082 Msa0703790:CDS 30.0%
TTGTATTCGACATTGTTACA+GGG - chr4_4:75819064-75819083 Msa0703790:CDS 30.0%
!! TCTTTCTCCTTGTTATTTGA+TGG - chr4_4:75819162-75819181 Msa0703790:CDS 30.0%
TGAGATTCCATCAAATAACA+AGG + chr4_4:75819172-75819191 None:intergenic 30.0%
CTGGTCCTTAAAAGTAATAT+AGG - chr4_4:75819277-75819296 Msa0703790:CDS 30.0%
! TTGTATGTTTGTTGATCACA+AGG + chr4_4:75819377-75819396 None:intergenic 30.0%
ATTCAATAGCCATGCAAATT+CGG - chr4_4:75819639-75819658 Msa0703790:intron 30.0%
! AATTTACCTTTGAGAGATAG+GGG + chr4_4:75819739-75819758 None:intergenic 30.0%
! GAAATTTACCTTTGAGAGAT+AGG + chr4_4:75819741-75819760 None:intergenic 30.0%
!! TTAAAAGAGTGTGACTTTTG+AGG - chr4_4:75819865-75819884 Msa0703790:intron 30.0%
TACAATTAGTATGGCATGTA+AGG + chr4_4:75820048-75820067 None:intergenic 30.0%
TGAAATTGTGATAGATGATC+AGG - chr4_4:75820072-75820091 Msa0703790:CDS 30.0%
GATATCTTAGAAAATAAGGC+TGG - chr4_4:75820220-75820239 Msa0703790:CDS 30.0%
ATACTGTTTAGTAATGCTGA+TGG + chr4_4:75820347-75820366 None:intergenic 30.0%
! GAAATGTGTCATTCTGATAT+TGG - chr4_4:75820442-75820461 Msa0703790:CDS 30.0%
GTTCTGTATAAGCTTCAATA+TGG - chr4_4:75820582-75820601 Msa0703790:CDS 30.0%
! TCTTAATTTTCCTTGTGAAC+AGG - chr4_4:75820841-75820860 Msa0703790:intron 30.0%
GCTTAAAGAATTAAAACCAG+AGG + chr4_4:75820867-75820886 None:intergenic 30.0%
!! AGTTGATTTTCAACAATCCT+TGG - chr4_4:75820970-75820989 Msa0703790:CDS 30.0%
GACAAGTTAAAATCAGATCT+AGG - chr4_4:75821073-75821092 Msa0703790:CDS 30.0%
ATTTGAAGACTCGGAAATTA+AGG - chr4_4:75821408-75821427 Msa0703790:intron 30.0%
CAAGTGCAGAATATCAAAAT+AGG + chr4_4:75821437-75821456 None:intergenic 30.0%
! TTTTCTCTCTTTTTCTTCCA+TGG + chr4_4:75821586-75821605 None:intergenic 30.0%
AAAGTGCACTATATTGATGA+CGG - chr4_4:75821611-75821630 Msa0703790:intron 30.0%
! ATTTTACAGGTTCTCATTTC+AGG - chr4_4:75821667-75821686 Msa0703790:intron 30.0%
TTAGAACATGTTACGTAGAA+AGG + chr4_4:75821829-75821848 None:intergenic 30.0%
TCTACGTAACATGTTCTAAT+AGG - chr4_4:75821830-75821849 Msa0703790:intron 30.0%
CTTCTTGAGTATAATTGACT+CGG + chr4_4:75821888-75821907 None:intergenic 30.0%
AGTAAAATCAGTTCTTTGCT+TGG - chr4_4:75822045-75822064 Msa0703790:CDS 30.0%
TTCAGAAAACAACTGAAGAT+GGG - chr4_4:75822190-75822209 Msa0703790:intron 30.0%
CACCTTCATCTAATACATTT+GGG + chr4_4:75822221-75822240 None:intergenic 30.0%
!!! TAAGCATTTTAACTTCTGCT+AGG + chr4_4:75822539-75822558 None:intergenic 30.0%
CATAGGGTTGAAAAATGAAA+AGG - chr4_4:75822594-75822613 Msa0703790:CDS 30.0%
! TTTTTCCATAACAAAAACGC+AGG + chr4_4:75822629-75822648 None:intergenic 30.0%
GTGCTCATTTAAATAATCGA+AGG - chr4_4:75822775-75822794 Msa0703790:intron 30.0%
GCTCATTTAAATAATCGAAG+GGG - chr4_4:75822777-75822796 Msa0703790:intron 30.0%
ATTCCAGAGAAAACAACAAA+AGG - chr4_4:75823261-75823280 Msa0703790:intron 30.0%
!!! ATTCCTTTTGTTGTTTTCTC+TGG + chr4_4:75823267-75823286 None:intergenic 30.0%
AAACAACAAAAGGAATACGA+TGG - chr4_4:75823271-75823290 Msa0703790:intron 30.0%
! GAATTTTTACAATTCGCTGT+CGG + chr4_4:75823456-75823475 None:intergenic 30.0%
ACAGCGAATTGTAAAAATTC+AGG - chr4_4:75823456-75823475 Msa0703790:intron 30.0%
TACATAATTCATGCAAAGGT+TGG + chr4_4:75823495-75823514 None:intergenic 30.0%
TGGAAAAGGTTATATTACGT+TGG - chr4_4:75823656-75823675 Msa0703790:intron 30.0%
!!! GACTACGATTTTTTGAAAGA+AGG - chr4_4:75823769-75823788 Msa0703790:intron 30.0%
AACTGAGATACAAGAAAATC+AGG - chr4_4:75823897-75823916 Msa0703790:CDS 30.0%
TTGCACAGTTGTGAAAAAAA+TGG + chr4_4:75823991-75824010 None:intergenic 30.0%
ATCAAGAATGCAAAACTTAG+AGG - chr4_4:75824055-75824074 Msa0703790:intron 30.0%
AACCATAATGCAAAATCATC+AGG - chr4_4:75824109-75824128 Msa0703790:intron 30.0%
!! AAAAGGCATTTACAAAAGAC+TGG + chr4_4:75824198-75824217 None:intergenic 30.0%
! CTTTTGTAAATGCCTTTTGT+AGG - chr4_4:75824200-75824219 Msa0703790:CDS 30.0%
ACAACCAAACATATTATGGA+TGG + chr4_4:75824346-75824365 None:intergenic 30.0%
TTGGTTGTTCATTGTATGTA+TGG - chr4_4:75824358-75824377 Msa0703790:intron 30.0%
TGGTTGTTCATTGTATGTAT+GGG - chr4_4:75824359-75824378 Msa0703790:intron 30.0%
GGTTAGATTGTAACATAATC+AGG - chr4_4:75824380-75824399 Msa0703790:intron 30.0%
! AGTTTTTGCATTTTTGTGTG+AGG + chr4_4:75824494-75824513 None:intergenic 30.0%
AGAATTTGGCAAATTTCAGC+CGG + chr4_4:75817813-75817832 None:intergenic 35.0%
!!! GTTTTGGATTGGTTGACAAT+AGG - chr4_4:75817973-75817992 Msa0703790:CDS 35.0%
AACTGGAGGAAGAAAAAAGA+TGG - chr4_4:75818054-75818073 Msa0703790:intron 35.0%
!! AACATATGATGTTTTCAGGC+TGG - chr4_4:75818320-75818339 Msa0703790:intron 35.0%
AGAGAACGATTTGACCTTAA+CGG + chr4_4:75818566-75818585 None:intergenic 35.0%
! CAGACAAGGCTTTAACATAA+AGG + chr4_4:75818697-75818716 None:intergenic 35.0%
ATTAAGCGCTTATTCAGACA+AGG + chr4_4:75818711-75818730 None:intergenic 35.0%
CAATACCAATATGTGTGAGA+TGG + chr4_4:75818806-75818825 None:intergenic 35.0%
! TTTTCTTCATTTGCTCTGCA+TGG + chr4_4:75818830-75818849 None:intergenic 35.0%
GTATTGCTGATCACATGTAT+TGG + chr4_4:75818920-75818939 None:intergenic 35.0%
!! AAAGAAGTACTTCCAGAGAT+AGG + chr4_4:75819023-75819042 None:intergenic 35.0%
!!! TCTCTGGAAGTACTTCTTTT+AGG - chr4_4:75819024-75819043 Msa0703790:CDS 35.0%
ACATCGTTCTAGTCCATTAT+CGG - chr4_4:75819096-75819115 Msa0703790:CDS 35.0%
! TTTTCAGTGCTTGGTAAATC+TGG - chr4_4:75819258-75819277 Msa0703790:CDS 35.0%
!!! TGATCAAGTTTTTTCCTCCA+GGG - chr4_4:75819305-75819324 Msa0703790:CDS 35.0%
GAATATGAAGAAGCTGAATC+AGG - chr4_4:75819461-75819480 Msa0703790:intron 35.0%
GGCTATTCAAAAAGTTCTCT+AGG + chr4_4:75819544-75819563 None:intergenic 35.0%
AGTAGAAATCCGAATTTGCA+TGG + chr4_4:75819651-75819670 None:intergenic 35.0%
! GCTTTAATCTTTTGAACAGC+AGG + chr4_4:75819694-75819713 None:intergenic 35.0%
ATAGGGGACAGTTAGAATAA+GGG + chr4_4:75819723-75819742 None:intergenic 35.0%
TTGTGATAGATGATCAGGAA+AGG - chr4_4:75820077-75820096 Msa0703790:CDS 35.0%
TGTGAACTCTCAAAAGTTCT+TGG - chr4_4:75820181-75820200 Msa0703790:CDS 35.0%
!! AAGTTCTTGGCTTTTCATCA+TGG - chr4_4:75820194-75820213 Msa0703790:CDS 35.0%
GTTTCAGGAAAAGACTGAAA+AGG + chr4_4:75820259-75820278 None:intergenic 35.0%
TGAAACAGAACCCAATAACA+CGG - chr4_4:75820273-75820292 Msa0703790:CDS 35.0%
!! CTATTGATTCCCGTGTTATT+GGG + chr4_4:75820286-75820305 None:intergenic 35.0%
!! ACTATTGATTCCCGTGTTAT+TGG + chr4_4:75820287-75820306 None:intergenic 35.0%
GGAATCAATAGTACTTCTCA+AGG - chr4_4:75820295-75820314 Msa0703790:CDS 35.0%
TTCTCAAGGATATGAGACAA+TGG - chr4_4:75820309-75820328 Msa0703790:CDS 35.0%
TCTCAAGGATATGAGACAAT+GGG - chr4_4:75820310-75820329 Msa0703790:CDS 35.0%
AACCATGTCTGCAAGTAAAA+TGG - chr4_4:75820488-75820507 Msa0703790:CDS 35.0%
! ATCCATTTTACTTGCAGACA+TGG + chr4_4:75820493-75820512 None:intergenic 35.0%
GAGCAGTTAAATGAGTTTGA+TGG + chr4_4:75820812-75820831 None:intergenic 35.0%
TAGTTATAGTGACAATGAGC+AGG - chr4_4:75820937-75820956 Msa0703790:CDS 35.0%
TTTGTTGGTGTGTATGAAGA+AGG + chr4_4:75821003-75821022 None:intergenic 35.0%
TCATACACACCAACAAAACA+AGG - chr4_4:75821006-75821025 Msa0703790:CDS 35.0%
!!! GCATAAGAACCTTGTTTTGT+TGG + chr4_4:75821018-75821037 None:intergenic 35.0%
GACTCTATTAAGTGTATCTG+TGG - chr4_4:75821147-75821166 Msa0703790:CDS 35.0%
! CTAGTTCTTTACTCATCCAT+CGG + chr4_4:75821207-75821226 None:intergenic 35.0%
TATCCCAATAAGCACTAGAA+GGG + chr4_4:75821258-75821277 None:intergenic 35.0%
GATACAGTTGAAAGCGAAAA+TGG - chr4_4:75821274-75821293 Msa0703790:CDS 35.0%
AGCTGATCATAGCAAATAGA+TGG + chr4_4:75821355-75821374 None:intergenic 35.0%
! TCATTGATTATTCCCCAAGT+TGG - chr4_4:75821383-75821402 Msa0703790:CDS 35.0%
! CATTGATTATTCCCCAAGTT+GGG - chr4_4:75821384-75821403 Msa0703790:CDS 35.0%
AGTGAACATATGGTCAAAAC+TGG + chr4_4:75821460-75821479 None:intergenic 35.0%
ACAACAGTTCAGTGAACATA+TGG + chr4_4:75821470-75821489 None:intergenic 35.0%
TTGTTATACACCTCAACACA+AGG - chr4_4:75821792-75821811 Msa0703790:intron 35.0%
TAATCGAATCTAAATCCCGA+GGG + chr4_4:75821999-75822018 None:intergenic 35.0%
AAATCAGTTCTTTGCTTGGT+AGG - chr4_4:75822049-75822068 Msa0703790:CDS 35.0%
AGTTGATCATGTACAAGTTC+TGG + chr4_4:75822129-75822148 None:intergenic 35.0%
!! CATCTTCAGTTGTTTTCTGA+AGG + chr4_4:75822191-75822210 None:intergenic 35.0%
CTTCAGAAAACAACTGAAGA+TGG - chr4_4:75822189-75822208 Msa0703790:intron 35.0%
AAAACAACTGAAGATGGGAA+AGG - chr4_4:75822195-75822214 Msa0703790:intron 35.0%
CCACCTTCATCTAATACATT+TGG + chr4_4:75822222-75822241 None:intergenic 35.0%
CCAAATGTATTAGATGAAGG+TGG - chr4_4:75822219-75822238 Msa0703790:intron 35.0%
!! AGCAACAATTGTTGGTTCTA+AGG + chr4_4:75822289-75822308 None:intergenic 35.0%
TTAGAACCAACAATTGTTGC+TGG - chr4_4:75822288-75822307 Msa0703790:intron 35.0%
ATTGTCAAAGTGTATCGTGT+TGG + chr4_4:75822434-75822453 None:intergenic 35.0%
GGGTTGAAAAATGAAAAGGT+TGG - chr4_4:75822598-75822617 Msa0703790:CDS 35.0%
! AAGTACCTGCGTTTTTGTTA+TGG - chr4_4:75822621-75822640 Msa0703790:intron 35.0%
! GTCGTGTCTTTTAAATACAC+AGG + chr4_4:75822729-75822748 None:intergenic 35.0%
ACGACATCCCTAACAAATAA+AGG - chr4_4:75822744-75822763 Msa0703790:intron 35.0%
ACATCCCTAACAAATAAAGG+TGG - chr4_4:75822747-75822766 Msa0703790:intron 35.0%
! CTCACCACCTTTATTTGTTA+GGG + chr4_4:75822754-75822773 None:intergenic 35.0%
! TCTCACCACCTTTATTTGTT+AGG + chr4_4:75822755-75822774 None:intergenic 35.0%
TGGGATATTTAAGCATACCT+CGG - chr4_4:75822804-75822823 Msa0703790:CDS 35.0%
TTACTTTCATTATCAGGGAG+AGG - chr4_4:75822906-75822925 Msa0703790:CDS 35.0%
!!! GACTCTTTGTTTTGTTCCAA+CGG + chr4_4:75823125-75823144 None:intergenic 35.0%
!! AGCACTCATTGTTTTGTTCT+CGG + chr4_4:75823147-75823166 None:intergenic 35.0%
ACCTTCAATGAAAGATTCAC+TGG - chr4_4:75823177-75823196 Msa0703790:intron 35.0%
GAATACGATGGTGACAAATT+TGG - chr4_4:75823283-75823302 Msa0703790:intron 35.0%
GTGAGCCTATAATAAGTTAG+AGG + chr4_4:75823578-75823597 None:intergenic 35.0%
ACCAGGTTAGGAAAAACTAT+GGG - chr4_4:75823608-75823627 Msa0703790:intron 35.0%
CTATGGGAAGATAATTTGGT+CGG - chr4_4:75823624-75823643 Msa0703790:intron 35.0%
!! AAATCAGAGGCTATTTCTGA+GGG - chr4_4:75823709-75823728 Msa0703790:intron 35.0%
!!! ACGATTTTTTGAAAGAAGGC+AGG - chr4_4:75823773-75823792 Msa0703790:intron 35.0%
TTACAACATTCAACAACCTG+TGG + chr4_4:75823879-75823898 None:intergenic 35.0%
! GTCCTGATGATTTTGCATTA+TGG + chr4_4:75824114-75824133 None:intergenic 35.0%
GATCTTGCTTTACCTACAAA+AGG + chr4_4:75824215-75824234 None:intergenic 35.0%
! ATACTTGGAGGCATATACGA+AGG + chr4_4:75817870-75817889 None:intergenic 40.0%
!! TTGGATTGGTTGACAATAGG+TGG - chr4_4:75817976-75817995 Msa0703790:CDS 40.0%
GAAAAGATGGACATAACTGG+AGG - chr4_4:75818040-75818059 Msa0703790:intron 40.0%
! AAGGCAGAAACTTTGAAGGA+GGG + chr4_4:75818769-75818788 None:intergenic 40.0%
TGTCTCCATCTCACACATAT+TGG - chr4_4:75818798-75818817 Msa0703790:intron 40.0%
GATGCATTTGTTCTTGCTTG+AGG - chr4_4:75818879-75818898 Msa0703790:CDS 40.0%
!! TTTTTGGTGGTTCCTATCTC+TGG - chr4_4:75819008-75819027 Msa0703790:CDS 40.0%
CATCGTTCTAGTCCATTATC+GGG - chr4_4:75819097-75819116 Msa0703790:CDS 40.0%
ATACCTTCACTTCCCGATAA+TGG + chr4_4:75819112-75819131 None:intergenic 40.0%
!!! CTGATCAAGTTTTTTCCTCC+AGG - chr4_4:75819304-75819323 Msa0703790:CDS 40.0%
! TTAAAGTTGCTTTGGTTCCC+TGG + chr4_4:75819325-75819344 None:intergenic 40.0%
GGCATGCATTAAAGTTGCTT+TGG + chr4_4:75819333-75819352 None:intergenic 40.0%
CAAAGTTATGCCTAACACAG+AGG - chr4_4:75819394-75819413 Msa0703790:intron 40.0%
TTACCGTCTAGCATTAACAG+TGG - chr4_4:75819428-75819447 Msa0703790:intron 40.0%
TGACCACTGTTAATGCTAGA+CGG + chr4_4:75819434-75819453 None:intergenic 40.0%
GATAGGGGACAGTTAGAATA+AGG + chr4_4:75819724-75819743 None:intergenic 40.0%
CAAACTTAGTGACGTAGCAA+TGG - chr4_4:75819892-75819911 Msa0703790:intron 40.0%
!! ATTCCGATAATGTTGGCCTT+TGG - chr4_4:75820006-75820025 Msa0703790:CDS 40.0%
GATCCAAAGGCCAACATTAT+CGG + chr4_4:75820012-75820031 None:intergenic 40.0%
!! ATAATGTTGGCCTTTGGATC+AGG - chr4_4:75820012-75820031 Msa0703790:CDS 40.0%
TAAGATCTTGCCTGATCCAA+AGG + chr4_4:75820025-75820044 None:intergenic 40.0%
AGTAAGATATCATCCACCTG+AGG + chr4_4:75820115-75820134 None:intergenic 40.0%
! GTGTTATTGGGTTCTGTTTC+AGG + chr4_4:75820274-75820293 None:intergenic 40.0%
GAAACAGAACCCAATAACAC+GGG - chr4_4:75820274-75820293 Msa0703790:CDS 40.0%
CTCAAGGATATGAGACAATG+GGG - chr4_4:75820311-75820330 Msa0703790:CDS 40.0%
TTTATACCAGCTGAAGCTGA+AGG - chr4_4:75820379-75820398 Msa0703790:CDS 40.0%
TGAAGGAAATTGGCAGGTAT+GGG - chr4_4:75820396-75820415 Msa0703790:CDS 40.0%
GACTCACTACAAAGTGATGT+TGG - chr4_4:75820641-75820660 Msa0703790:intron 40.0%
ATTCTTTAAGCGCATCCACA+TGG - chr4_4:75820876-75820895 Msa0703790:CDS 40.0%
CCTGAATAGGCACTATCTTT+GGG + chr4_4:75820902-75820921 None:intergenic 40.0%
ATGAAGAAGGAACTGTTCCA+AGG + chr4_4:75820990-75821009 None:intergenic 40.0%
GAGTGTCTTCTATTCCAACT+AGG + chr4_4:75821111-75821130 None:intergenic 40.0%
CGATGGATGAGTAAAGAACT+AGG - chr4_4:75821205-75821224 Msa0703790:CDS 40.0%
ATTCCCCTTCTAGTGCTTAT+TGG - chr4_4:75821251-75821270 Msa0703790:CDS 40.0%
TTCCCCTTCTAGTGCTTATT+GGG - chr4_4:75821252-75821271 Msa0703790:CDS 40.0%
ATCCCAATAAGCACTAGAAG+GGG + chr4_4:75821257-75821276 None:intergenic 40.0%
GTATCCCAATAAGCACTAGA+AGG + chr4_4:75821259-75821278 None:intergenic 40.0%
AGTCTTCAAATGCCCAACTT+GGG + chr4_4:75821399-75821418 None:intergenic 40.0%
AAGTTGGGCATTTGAAGACT+CGG - chr4_4:75821399-75821418 Msa0703790:intron 40.0%
ACAACAGAGAACACTATTCC+TGG + chr4_4:75821776-75821795 None:intergenic 40.0%
CTAATCGAATCTAAATCCCG+AGG + chr4_4:75822000-75822019 None:intergenic 40.0%
GGCCCAAATGTATTAGATGA+AGG - chr4_4:75822216-75822235 Msa0703790:intron 40.0%
! CTTCATTTTGCAGCCTTTCT+TGG - chr4_4:75822252-75822271 Msa0703790:intron 40.0%
TTCACACCAGCAACAATTGT+TGG + chr4_4:75822297-75822316 None:intergenic 40.0%
GTGAACTTTCGCGATGTAAA+TGG - chr4_4:75822318-75822337 Msa0703790:intron 40.0%
ACTTTCGCGATGTAAATGGA+TGG - chr4_4:75822322-75822341 Msa0703790:intron 40.0%
! TAAATAATCGAAGGGGTGTG+TGG - chr4_4:75822784-75822803 Msa0703790:intron 40.0%
! AAATAATCGAAGGGGTGTGT+GGG - chr4_4:75822785-75822804 Msa0703790:intron 40.0%
GGGATATTTAAGCATACCTC+GGG - chr4_4:75822805-75822824 Msa0703790:CDS 40.0%
ATTTAAGCATACCTCGGGAA+AGG - chr4_4:75822810-75822829 Msa0703790:CDS 40.0%
! TGGACTCTTTTCATGGGAAA+TGG + chr4_4:75822842-75822861 None:intergenic 40.0%
! TCACGTTGGACTCTTTTCAT+GGG + chr4_4:75822848-75822867 None:intergenic 40.0%
AAAAATCACGAGTCTCACGT+TGG + chr4_4:75822862-75822881 None:intergenic 40.0%
TTGCTTCCCTCATATCTCTT+GGG - chr4_4:75822933-75822952 Msa0703790:intron 40.0%
TTCTACCAGAAGGATGTTGT+GGG + chr4_4:75822988-75823007 None:intergenic 40.0%
AATGGACACAAAGGAATTGC+TGG - chr4_4:75823031-75823050 Msa0703790:intron 40.0%
AGAAACATGAGAGAAACCGT+TGG - chr4_4:75823106-75823125 Msa0703790:intron 40.0%
GCCAGTGAATCTTTCATTGA+AGG + chr4_4:75823181-75823200 None:intergenic 40.0%
TTCAGAACAAGTTTCGCAGT+TGG - chr4_4:75823404-75823423 Msa0703790:intron 40.0%
AACAAGTTTCGCAGTTGGAA+GGG - chr4_4:75823409-75823428 Msa0703790:intron 40.0%
TTATTATAGGCTCACGTGAG+AGG - chr4_4:75823583-75823602 Msa0703790:intron 40.0%
CACCAGGTTAGGAAAAACTA+TGG - chr4_4:75823607-75823626 Msa0703790:intron 40.0%
! TCCCATAGTTTTTCCTAACC+TGG + chr4_4:75823612-75823631 None:intergenic 40.0%
GGAAGATAATTTGGTCGGTT+GGG - chr4_4:75823629-75823648 Msa0703790:intron 40.0%
! ATATTACGTTGGCGTCGAAA+AGG - chr4_4:75823667-75823686 Msa0703790:intron 40.0%
TTTGCGTGGATTCAAATCAG+AGG - chr4_4:75823696-75823715 Msa0703790:intron 40.0%
!! CAAATCAGAGGCTATTTCTG+AGG - chr4_4:75823708-75823727 Msa0703790:intron 40.0%
AAAATCGTAGTCATCCTCAG+TGG + chr4_4:75823761-75823780 None:intergenic 40.0%
GAAGCAAACTGAGAAAAGGT+TGG - chr4_4:75823795-75823814 Msa0703790:intron 40.0%
!! CATTGACTTCACTCTAGCAA+GGG + chr4_4:75823827-75823846 None:intergenic 40.0%
CATTCAACAACCTGTGGTAT+TGG + chr4_4:75823873-75823892 None:intergenic 40.0%
TATGGTTCAGCAGATGATTC+AGG + chr4_4:75824096-75824115 None:intergenic 40.0%
ACAATGCTTCAAGATCAACG+AGG + chr4_4:75824278-75824297 None:intergenic 40.0%
!! CGTTGATCTTGAAGCATTGT+TGG - chr4_4:75824278-75824297 Msa0703790:intron 40.0%
GCTAATTTCTAAGTGGCTGT+AGG + chr4_4:75824321-75824340 None:intergenic 40.0%
GATGGACGCTAATTTCTAAG+TGG + chr4_4:75824328-75824347 None:intergenic 40.0%
GCGTCCATCCATAATATGTT+TGG - chr4_4:75824339-75824358 Msa0703790:intron 40.0%
ACAATATCGATGGCTACGTC+CGG - chr4_4:75817791-75817810 Msa0703790:three_prime_UTR 45.0%
!! ATGTTTTCAGGCTGGAAGTG+TGG - chr4_4:75818328-75818347 Msa0703790:intron 45.0%
ACGAACTTACTGGATGCTTG+AGG - chr4_4:75818403-75818422 Msa0703790:CDS 45.0%
! CAAGGCAGAAACTTTGAAGG+AGG + chr4_4:75818770-75818789 None:intergenic 45.0%
AGGCAAGGCAGAAACTTTGA+AGG + chr4_4:75818773-75818792 None:intergenic 45.0%
AGTCCATTATCGGGAAGTGA+AGG - chr4_4:75819106-75819125 Msa0703790:CDS 45.0%
AACTGTCCCCTATCTCTCAA+AGG - chr4_4:75819730-75819749 Msa0703790:intron 45.0%
CTTAGTGACGTAGCAATGGA+TGG - chr4_4:75819896-75819915 Msa0703790:intron 45.0%
CAATTTCCTTCAGCTTCAGC+TGG + chr4_4:75820388-75820407 None:intergenic 45.0%
CAGCTGAAGCTGAAGGAAAT+TGG - chr4_4:75820386-75820405 Msa0703790:CDS 45.0%
TGAAGCTGAAGGAAATTGGC+AGG - chr4_4:75820390-75820409 Msa0703790:CDS 45.0%
CTGAAGGAAATTGGCAGGTA+TGG - chr4_4:75820395-75820414 Msa0703790:CDS 45.0%
CCCAAAGATAGTGCCTATTC+AGG - chr4_4:75820899-75820918 Msa0703790:CDS 45.0%
GCCTGAATAGGCACTATCTT+TGG + chr4_4:75820903-75820922 None:intergenic 45.0%
GGGATCGATAAAAGCCTAGT+TGG - chr4_4:75821094-75821113 Msa0703790:CDS 45.0%
AAGTGTATCTGTGGCAGAAG+AGG - chr4_4:75821156-75821175 Msa0703790:CDS 45.0%
AGTGTATCTGTGGCAGAAGA+GGG - chr4_4:75821157-75821176 Msa0703790:CDS 45.0%
TGAAACTGTCGAGCTTCTTC+AGG + chr4_4:75821183-75821202 None:intergenic 45.0%
CAGTACAACTATTCCTTCCC+AGG - chr4_4:75821303-75821322 Msa0703790:CDS 45.0%
ATAGTTCTCCAAGTGCACCT+GGG + chr4_4:75821323-75821342 None:intergenic 45.0%
GCACTTGGAGAACTATGTAC+TGG - chr4_4:75821327-75821346 Msa0703790:CDS 45.0%
GTCTTCAAATGCCCAACTTG+GGG + chr4_4:75821398-75821417 None:intergenic 45.0%
GAGTCTTCAAATGCCCAACT+TGG + chr4_4:75821400-75821419 None:intergenic 45.0%
CTATTCCTGGTTATCTCTGC+CGG + chr4_4:75821763-75821782 None:intergenic 45.0%
TATACACCTCAACACAAGGC+TGG - chr4_4:75821796-75821815 Msa0703790:intron 45.0%
ACTCAAGAAGTCAACACTGC+CGG - chr4_4:75821898-75821917 Msa0703790:CDS 45.0%
! ATTGCTGCTTCTGATCTCAC+CGG + chr4_4:75821920-75821939 None:intergenic 45.0%
CAGTTCTTTGCTTGGTAGGA+AGG - chr4_4:75822053-75822072 Msa0703790:CDS 45.0%
TTGGTAGGAAGGACGATGAA+TGG - chr4_4:75822064-75822083 Msa0703790:CDS 45.0%
TGGTAGGAAGGACGATGAAT+GGG - chr4_4:75822065-75822084 Msa0703790:CDS 45.0%
GTATTAGATGAAGGTGGCCA+AGG - chr4_4:75822225-75822244 Msa0703790:intron 45.0%
CTGCAAAATGAAGCACACCT+TGG + chr4_4:75822245-75822264 None:intergenic 45.0%
AGCCTTTCTTGGCTACGATT+GGG - chr4_4:75822263-75822282 Msa0703790:intron 45.0%
!! ATGGATGGACTGCTCTTCAT+TGG - chr4_4:75822337-75822356 Msa0703790:intron 45.0%
!! TGGATGGACTGCTCTTCATT+GGG - chr4_4:75822338-75822357 Msa0703790:intron 45.0%
AATTGCACTCATCTTCCGTG+AGG - chr4_4:75822680-75822699 Msa0703790:intron 45.0%
! CTCACGTTGGACTCTTTTCA+TGG + chr4_4:75822849-75822868 None:intergenic 45.0%
GTTGCTTCCCTCATATCTCT+TGG - chr4_4:75822932-75822951 Msa0703790:CDS 45.0%
TGCTTCCCTCATATCTCTTG+GGG - chr4_4:75822934-75822953 Msa0703790:intron 45.0%
GTTCTACCAGAAGGATGTTG+TGG + chr4_4:75822989-75823008 None:intergenic 45.0%
TCCATTTGCAGAAGCTAGGT+CGG + chr4_4:75823017-75823036 None:intergenic 45.0%
TGTGTCCATTTGCAGAAGCT+AGG + chr4_4:75823021-75823040 None:intergenic 45.0%
GCTTCTGCAAATGGACACAA+AGG - chr4_4:75823022-75823041 Msa0703790:intron 45.0%
AATGCGAAGTCACACAAGTC+TGG - chr4_4:75823343-75823362 Msa0703790:intron 45.0%
GAACAAGTTTCGCAGTTGGA+AGG - chr4_4:75823408-75823427 Msa0703790:intron 45.0%
GGGAAGATAATTTGGTCGGT+TGG - chr4_4:75823628-75823647 Msa0703790:intron 45.0%
AATTTGGTCGGTTGGGATTG+TGG - chr4_4:75823636-75823655 Msa0703790:intron 45.0%
!! GGCTATTTCTGAGGGAACTA+TGG - chr4_4:75823717-75823736 Msa0703790:intron 45.0%
TCTGAGGGAACTATGGTACA+AGG - chr4_4:75823724-75823743 Msa0703790:intron 45.0%
AGGTGTATCATCTTCCACTG+AGG - chr4_4:75823744-75823763 Msa0703790:intron 45.0%
GCAGGAAGCAAACTGAGAAA+AGG - chr4_4:75823791-75823810 Msa0703790:intron 45.0%
!! CCATTGACTTCACTCTAGCA+AGG + chr4_4:75823828-75823847 None:intergenic 45.0%
CCTTGCTAGAGTGAAGTCAA+TGG - chr4_4:75823825-75823844 Msa0703790:intron 45.0%
!! TGGTATTGGTCTCTTGCATC+TGG + chr4_4:75823859-75823878 None:intergenic 45.0%
ATGCAAGAGACCAATACCAC+AGG - chr4_4:75823860-75823879 Msa0703790:CDS 45.0%
GTTCAGCAGATGATTCAGGT+GGG + chr4_4:75824092-75824111 None:intergenic 45.0%
! AAAGACTGGCTAAGCTTTGC+TGG + chr4_4:75824184-75824203 None:intergenic 45.0%
GGAAGCTCATGAGAGACTCA+AGG - chr4_4:75818089-75818108 Msa0703790:intron 50.0%
TGTGAGATGGAGACAAAGCG+AGG + chr4_4:75818793-75818812 None:intergenic 50.0%
! AAGTTGCTTTGGTTCCCTGG+AGG + chr4_4:75819322-75819341 None:intergenic 50.0%
GAAGTCTCTGCCTCTGTGTT+AGG + chr4_4:75819407-75819426 None:intergenic 50.0%
AAGGTTGCCTGTCATTCCTC+AGG - chr4_4:75820096-75820115 Msa0703790:CDS 50.0%
TCATCCACCTGAGGAATGAC+AGG + chr4_4:75820106-75820125 None:intergenic 50.0%
TTTCCTTGTGAACAGGCCTC+TGG - chr4_4:75820848-75820867 Msa0703790:CDS 50.0%
AAACCAGAGGCCTGTTCACA+AGG + chr4_4:75820854-75820873 None:intergenic 50.0%
CTCACACGATGAGCCTGAAT+AGG + chr4_4:75820915-75820934 None:intergenic 50.0%
CTATTCAGGCTCATCGTGTG+AGG - chr4_4:75820913-75820932 Msa0703790:CDS 50.0%
AGCTCGACAGTTTCAACCGA+TGG - chr4_4:75821188-75821207 Msa0703790:CDS 50.0%
TATTCCTTCCCAGGTGCACT+TGG - chr4_4:75821312-75821331 Msa0703790:CDS 50.0%
CATAGTTCTCCAAGTGCACC+TGG + chr4_4:75821324-75821343 None:intergenic 50.0%
CAGCCTTTCTTGGCTACGAT+TGG - chr4_4:75822262-75822281 Msa0703790:intron 50.0%
! ATGGACTGCTCTTCATTGGG+CGG - chr4_4:75822341-75822360 Msa0703790:intron 50.0%
TGCTGCCCCAAGAGATATGA+GGG + chr4_4:75822942-75822961 None:intergenic 50.0%
CATGGATCAGTAAGTGCTCC+TGG + chr4_4:75822965-75822984 None:intergenic 50.0%
CGTGTTGCAGCAACATGAAC+AGG + chr4_4:75823382-75823401 None:intergenic 50.0%
GTCGGTTGGGATTGTGGAAA+AGG - chr4_4:75823642-75823661 Msa0703790:intron 50.0%
! CGAAAAGGTAGTGGTTTGCG+TGG - chr4_4:75823682-75823701 Msa0703790:intron 50.0%
GGTTCAGCAGATGATTCAGG+TGG + chr4_4:75824093-75824112 None:intergenic 50.0%
TTGCACTGCTACTACGCCCA+TGG - chr4_4:75818356-75818375 Msa0703790:intron 55.0%
GATGGAGACAAAGCGAGGCA+AGG + chr4_4:75818788-75818807 None:intergenic 55.0%
GTTGCCTGTCATTCCTCAGG+TGG - chr4_4:75820099-75820118 Msa0703790:CDS 55.0%
GGCACTATCTTTGGGCCATG+TGG + chr4_4:75820894-75820913 None:intergenic 55.0%
TTCTCCAAGTGCACCTGGGA+AGG + chr4_4:75821319-75821338 None:intergenic 55.0%
! GTTCGGCGAGATAGAAGTGC+CGG - chr4_4:75821741-75821760 Msa0703790:intron 55.0%
!! AAGTGCCGGCAGAGATAACC+AGG - chr4_4:75821755-75821774 Msa0703790:intron 55.0%
CACCTCAACACAAGGCTGGA+CGG - chr4_4:75821800-75821819 Msa0703790:intron 55.0%
ACCTCAACACAAGGCTGGAC+GGG - chr4_4:75821801-75821820 Msa0703790:intron 55.0%
CCGAGGGAAGTCATGCTCTT+GGG + chr4_4:75821983-75822002 None:intergenic 55.0%
! CCCAAGAGCATGACTTCCCT+CGG - chr4_4:75821980-75821999 Msa0703790:CDS 55.0%
! CCAAGAGCATGACTTCCCTC+GGG - chr4_4:75821981-75822000 Msa0703790:CDS 55.0%
GGCCCAATCGTAGCCAAGAA+AGG + chr4_4:75822268-75822287 None:intergenic 55.0%
! CTTCATTGGGCGGCGTTTTG+TGG - chr4_4:75822351-75822370 Msa0703790:intron 55.0%
GTGCTGCCCCAAGAGATATG+AGG + chr4_4:75822943-75822962 None:intergenic 55.0%
ATATCTCTTGGGGCAGCACC+AGG - chr4_4:75822944-75822963 Msa0703790:intron 55.0%
CCAGAAGGATGTTGTGGGCA+TGG + chr4_4:75822983-75823002 None:intergenic 55.0%
CCATGCCCACAACATCCTTC+TGG - chr4_4:75822980-75822999 Msa0703790:intron 55.0%
TCGGCTGGTGTTCTACCAGA+AGG + chr4_4:75822998-75823017 None:intergenic 55.0%
TTTGCAGAAGCTAGGTCGGC+TGG + chr4_4:75823013-75823032 None:intergenic 55.0%
GCCGACCTAGCTTCTGCAAA+TGG - chr4_4:75823013-75823032 Msa0703790:intron 55.0%
ACGTGAGAGGTCACCAGGTT+AGG - chr4_4:75823596-75823615 Msa0703790:intron 55.0%
! CGTTGGCGTCGAAAAGGTAG+TGG - chr4_4:75823673-75823692 Msa0703790:intron 55.0%
! ACCCGTCCAGCCTTGTGTTG+AGG + chr4_4:75821805-75821824 None:intergenic 60.0%
CCCGAGGGAAGTCATGCTCT+TGG + chr4_4:75821984-75822003 None:intergenic 60.0%
! ATTGGGCGGCGTTTTGTGGC+AGG - chr4_4:75822355-75822374 Msa0703790:intron 60.0%
AATGGCTCTCGCCTTTCCCG+AGG + chr4_4:75822824-75822843 None:intergenic 60.0%
GGCTCACGTGAGAGGTCACC+AGG - chr4_4:75823591-75823610 Msa0703790:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 75817732 75824545 75817732 ID=Msa0703790;Name=Msa0703790
chr4_4 mRNA 75817732 75824545 75817732 ID=Msa0703790-mRNA-1;Parent=Msa0703790;Name=Msa0703790-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|1|0.91|1|1|1|12|213|1086
chr4_4 exon 75817732 75818055 75817732 ID=Msa0703790-mRNA-1:exon:23890;Parent=Msa0703790-mRNA-1
chr4_4 exon 75818359 75818685 75818359 ID=Msa0703790-mRNA-1:exon:23889;Parent=Msa0703790-mRNA-1
chr4_4 exon 75818800 75819355 75818800 ID=Msa0703790-mRNA-1:exon:23888;Parent=Msa0703790-mRNA-1
chr4_4 exon 75819901 75820601 75819901 ID=Msa0703790-mRNA-1:exon:23887;Parent=Msa0703790-mRNA-1
chr4_4 exon 75820848 75821414 75820848 ID=Msa0703790-mRNA-1:exon:23886;Parent=Msa0703790-mRNA-1
chr4_4 exon 75821866 75822191 75821866 ID=Msa0703790-mRNA-1:exon:23885;Parent=Msa0703790-mRNA-1
chr4_4 exon 75822526 75822639 75822526 ID=Msa0703790-mRNA-1:exon:23884;Parent=Msa0703790-mRNA-1
chr4_4 exon 75822795 75822951 75822795 ID=Msa0703790-mRNA-1:exon:23883;Parent=Msa0703790-mRNA-1
chr4_4 exon 75823150 75823192 75823150 ID=Msa0703790-mRNA-1:exon:23882;Parent=Msa0703790-mRNA-1
chr4_4 exon 75823851 75823939 75823851 ID=Msa0703790-mRNA-1:exon:23881;Parent=Msa0703790-mRNA-1
chr4_4 exon 75824167 75824282 75824167 ID=Msa0703790-mRNA-1:exon:23880;Parent=Msa0703790-mRNA-1
chr4_4 exon 75824392 75824545 75824392 ID=Msa0703790-mRNA-1:exon:23879;Parent=Msa0703790-mRNA-1
chr4_4 CDS 75824392 75824545 75824392 ID=Msa0703790-mRNA-1:cds;Parent=Msa0703790-mRNA-1
chr4_4 CDS 75824167 75824282 75824167 ID=Msa0703790-mRNA-1:cds;Parent=Msa0703790-mRNA-1
chr4_4 CDS 75823851 75823939 75823851 ID=Msa0703790-mRNA-1:cds;Parent=Msa0703790-mRNA-1
chr4_4 CDS 75823150 75823192 75823150 ID=Msa0703790-mRNA-1:cds;Parent=Msa0703790-mRNA-1
chr4_4 CDS 75822795 75822951 75822795 ID=Msa0703790-mRNA-1:cds;Parent=Msa0703790-mRNA-1
chr4_4 CDS 75822526 75822639 75822526 ID=Msa0703790-mRNA-1:cds;Parent=Msa0703790-mRNA-1
chr4_4 CDS 75821866 75822191 75821866 ID=Msa0703790-mRNA-1:cds;Parent=Msa0703790-mRNA-1
chr4_4 CDS 75820848 75821414 75820848 ID=Msa0703790-mRNA-1:cds;Parent=Msa0703790-mRNA-1
chr4_4 CDS 75819901 75820601 75819901 ID=Msa0703790-mRNA-1:cds;Parent=Msa0703790-mRNA-1
chr4_4 CDS 75818800 75819355 75818800 ID=Msa0703790-mRNA-1:cds;Parent=Msa0703790-mRNA-1
chr4_4 CDS 75818359 75818685 75818359 ID=Msa0703790-mRNA-1:cds;Parent=Msa0703790-mRNA-1
chr4_4 CDS 75817945 75818055 75817945 ID=Msa0703790-mRNA-1:cds;Parent=Msa0703790-mRNA-1
chr4_4 three_prime_UTR 75817732 75817944 75817732 ID=Msa0703790-mRNA-1:three_prime_utr;Parent=Msa0703790-mRNA-1
Gene Sequence

>Msa0703790

ATGTCTAATTCATATACTATGATTGCCACAACAGATATTGAAGAAATTTTATTACAAGCACAATATCGATGGCTACGTCCGGCTGAAATTTGCCAAATTCTCACTAACTATAACAGCTTTCAGATTTCTTCGCAACCTTCGTATATGCCTCCAAGTGGTTCACTTTTCTTGTTTGATCGAAAGGTGACGAGATACTTTAGAAAAGATGGACATAACTGGAGGAAGAAAAAAGATGGAAAAACTGTTAGGGAAGCTCATGAGAGACTCAAGGCTGGAAGTGTGGAAGTATTGCACTGCTACTACGCCCATGGAGAACAAAATGACAATTTTCAAAGACGAACTTACTGGATGCTTGAGGAGGAACTCTCACACATCGTTCTAGTCCATTATCGGGAAGTGAAGGGAACCAAAGCAACTTTAATGCATGCCAAAGAAAATGAAGAATCTAATCCTTGTGATCAACAAACATACAAAGTTATGCCTAACACAGAGGCAGAGACTTCTTTACCGTCTAGCATTAACAGTGGTCAAGCATCAGAATATGAAGAAGCTGAATCAGCATTCAATAGCCATGCAAATTCGGATTTCTACTCTTTTCTTGAGCTGCAACAGCCTGCTGTTCAAAAGATTAAAGCTCAACTCCCTTATTCTAACTGTCCCCTATCTCTCAAAGATGATCAGGAAAGGTTGCCTGTCATTCCTCAGGTGGATGATATCTTACTCAGTCAAGCTAATGAAACCAAATACATTAACAATGTTGGATTGACATGTGAACTCTCAAAAGTTCTTGGCTTTTCATCATGGCAAGATATCTTAGAAAATAAGGCTGGAAGTCATAATGTGCCTTTTCAGTCTTTTCCTGAAACAGAACCCAATAACACGGGAATCAATAGTACTTCTCAAGGATATGAGACAATGGGGCAACATTTAACCATCAGCATTACTAAACAGTATGATAATAGAAGTTTTATACCAGCTGAAGCTGAAGGAAATTGGCAGGCCTCTGGTTTTAATTCTTTAAGCGCATCCACATGGCCCAAAGATAGTGCCTATTCAGGCTCATCGTGTGAGGTTAGTTATAGTGACAATGAGCAGGAAGTTAATGAAGTTGATTTTCAACAATCCTTGGAACAGTTCCTTCTTCATACACACCAACAAAACAAGGTTCTTATGCAAAATAGCCCTCATGAAATACTTTTAAAAGCAGAAGACAAGTTAAAATCAGATCTAGGGATCGATAAAAGCCTAGTTGGAATAGAAGACACTCATTTCACTTCAAAGAAGACTCTATTAAGTGTATCTGTGGCAGAAGAGGGCCTGAAGAAGCTCGACAGTTTCAACCGATGGATGAGTAAAGAACTAGGCGATGTCGAAGAATCAAGCAAGCATTCCCCTTCTAGTGCTTATTGGGATACAGTTGAAAGCGAAAATGGTGTTGACAGTACAACTATTCCTTCCCAGGTGCACTTGGAGAACTATGTACTGGATCCATCTATTTGCTATGATCAGCTTTTTAGCATCATTGATTATTCCCCAAGTTGGGCATTTGAAGACTCGGAAATTAAGGTTCTCATTTCAGGACGATTCTTAAAGAGTCAACATGAAGCAGAAGATTGTAAATGGTCATGCATGTTCGGCGAGATAGAAGTGCCGGCAGAGATAACCAGGAATAGTGTTCTCTGTTGTTATACACCTCAACACAAGGCTGGACGGGTTCCTTTCTACGTAACATGTTCTAATAGGTTAGCATGTAGTGAAGTGCGCGAATTCGATTTCCGAGTCAATTATACTCAAGAAGTCAACACTGCCGGTGAGATCAGAAGCAGCAATACTTATGATACTTTTAATAAACGATTTGGAGAATTGTTGTCCCAAGAGCATGACTTCCCTCGGGATTTAGATTCGATTAGTGTGAATGAGAAATCTCAACTGAGAAGTAAAATCAGTTCTTTGCTTGGTAGGAAGGACGATGAATGGGACGAACTACTTAAATTTACTCTAGACAAAGATTTTTCTCCAGAACTTGTACATGATCAACTGCTTCAAAATCTTGTAAAAGATAAACTACATGCATGGCTCCTTCAGAAAACAACTGAAGATGGGAAAGGCCCAAATGTATTAGATGAAGGTGGCCAAGGTGTGCTTCATTTTGCAGCCTTTCTTGGCTACGATTGGGCCTTAGAACCAACAATTGTTGCTGGTGTGAATGTGAACTTTCGCGATGTAAATGGATGGACTGCTCTTCATTGGGCGGCGTTTTGTGGCAGGGAGAGGACAGTTGCTTCCCTCATATCTCTTGGGGCAGCACCAGGAGCACTTACTGATCCATGCCCACAACATCCTTCTGGTAGAACACCAGCCGACCTAGCTTCTGCAAATGGACACAAAGGAATTGCTGGTTATCTTGCAGAATCTTTCTTAAGCTCACAACTCAAGTCTCTTGATTTGAAAAGAAACATGAGAGAAACCGTTGGAACAAAACAAAGAGTCCGAGAACAAAACAATGAGTGCTTCTCACATGAACCTTCAATGAAAGATTCACTGGCTGCAGTGTGCAATGCAACTCAAGCTGCTGCTCGTATTCATCAAGTTTTTAGAGTGCAATCATTCCAGAGAAAACAACAAAAGGAATACGATGGTGACAAATTTGGAATATCTGATGAACGTGCTCTTTCACTAATATCAGTGAATGCGAAGTCACACAAGTCTGGACTACGCAATGAGCCTGTTCATGTTGCTGCAACACGTATTCAGAACAAGTTTCGCAGTTGGAAGGGCAGAAAAGATTTTTTGATTATCCGACAGCGAATTGTAAAAATTCAGGCTCACGTGAGAGGTCACCAGGTTAGGAAAAACTATGGGAAGATAATTTGGTCGGTTGGGATTGTGGAAAAGGTTATATTACGTTGGCGTCGAAAAGGTAGTGGTTTGCGTGGATTCAAATCAGAGGCTATTTCTGAGGGAACTATGGTACAAGGTGTATCATCTTCCACTGAGGATGACTACGATTTTTTGAAAGAAGGCAGGAAGCAAACTGAGAAAAGGTTGGAGAAAGCCCTTGCTAGAGTGAAGTCAATGGCTCAATATCCAGATGCAAGAGACCAATACCACAGGTTGTTGAATGTTGTAACTGAGATACAAGAAAATCAGGTAAAGCAAGATCGAAATTTTATCAATTCAGAAGAAACAAGACAATTCAATAACCTCGTTGATCTTGAAGCATTGTTGGACGAAGATACTTTCATGCCTACAGCCACTTAG
Protein sequence

>Msa0703790

MSNSYTMIATTDIEEILLQAQYRWLRPAEICQILTNYNSFQISSQPSYMPPSGSLFLFDRKVTRYFRKDGHNWRKKKDGKTVREAHERLKAGSVEVLHCYYAHGEQNDNFQRRTYWMLEEELSHIVLVHYREVKGTKATLMHAKENEESNPCDQQTYKVMPNTEAETSLPSSINSGQASEYEEAESAFNSHANSDFYSFLELQQPAVQKIKAQLPYSNCPLSLKDDQERLPVIPQVDDILLSQANETKYINNVGLTCELSKVLGFSSWQDILENKAGSHNVPFQSFPETEPNNTGINSTSQGYETMGQHLTISITKQYDNRSFIPAEAEGNWQASGFNSLSASTWPKDSAYSGSSCEVSYSDNEQEVNEVDFQQSLEQFLLHTHQQNKVLMQNSPHEILLKAEDKLKSDLGIDKSLVGIEDTHFTSKKTLLSVSVAEEGLKKLDSFNRWMSKELGDVEESSKHSPSSAYWDTVESENGVDSTTIPSQVHLENYVLDPSICYDQLFSIIDYSPSWAFEDSEIKVLISGRFLKSQHEAEDCKWSCMFGEIEVPAEITRNSVLCCYTPQHKAGRVPFYVTCSNRLACSEVREFDFRVNYTQEVNTAGEIRSSNTYDTFNKRFGELLSQEHDFPRDLDSISVNEKSQLRSKISSLLGRKDDEWDELLKFTLDKDFSPELVHDQLLQNLVKDKLHAWLLQKTTEDGKGPNVLDEGGQGVLHFAAFLGYDWALEPTIVAGVNVNFRDVNGWTALHWAAFCGRERTVASLISLGAAPGALTDPCPQHPSGRTPADLASANGHKGIAGYLAESFLSSQLKSLDLKRNMRETVGTKQRVREQNNECFSHEPSMKDSLAAVCNATQAAARIHQVFRVQSFQRKQQKEYDGDKFGISDERALSLISVNAKSHKSGLRNEPVHVAATRIQNKFRSWKGRKDFLIIRQRIVKIQAHVRGHQVRKNYGKIIWSVGIVEKVILRWRRKGSGLRGFKSEAISEGTMVQGVSSSTEDDYDFLKEGRKQTEKRLEKALARVKSMAQYPDARDQYHRLLNVVTEIQENQVKQDRNFINSEETRQFNNLVDLEALLDEDTFMPTAT*