Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0570820 | XP_013446943.1 | 99.655 | 579 | 2 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1188 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0570820 | sp|Q941L3|BON1_ARATH | 70.934 | 578 | 164 | 2 | 1 | 577 | 1 | 575 | 0.0 | 827 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0570820 | A0A072U553 | 99.655 | 579 | 2 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1188 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0568310 | Msa0570820 | 0.817082 | 3.965863e-52 | -8.615850e-47 |
Msa0569600 | Msa0570820 | 0.800963 | 1.126263e-48 | -8.615850e-47 |
Msa0570210 | Msa0570820 | 0.812047 | 5.160159e-51 | -8.615850e-47 |
Msa0570360 | Msa0570820 | 0.843704 | 1.189241e-58 | -8.615850e-47 |
Msa0570380 | Msa0570820 | 0.851607 | 7.950956e-61 | -8.615850e-47 |
Msa0570410 | Msa0570820 | 0.851618 | 7.892987e-61 | -8.615850e-47 |
Msa0570730 | Msa0570820 | 0.800859 | 1.182480e-48 | -8.615850e-47 |
Msa0570820 | Msa0570840 | 0.807712 | 4.420772e-50 | -8.615850e-47 |
Msa0570820 | Msa0570910 | 0.861504 | 9.793424e-64 | -8.615850e-47 |
Msa0570820 | Msa0570970 | 0.872490 | 3.054887e-67 | -8.615850e-47 |
Msa0570820 | Msa0571010 | 0.832860 | 7.429392e-56 | -8.615850e-47 |
Msa0570820 | Msa0705320 | 0.803703 | 3.072255e-49 | -8.615850e-47 |
Msa0570820 | Msa0925270 | 0.802657 | 5.055617e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0570820 | MtrunA17_Chr8g0385701 | 99.655 | 579 | 2 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1188 |
Msa0570820 | MtrunA17_Chr7g0273481 | 60.208 | 578 | 224 | 4 | 1 | 577 | 1 | 573 | 0.0 | 715 |
Msa0570820 | MtrunA17_Chr1g0170101 | 57.785 | 578 | 198 | 4 | 1 | 577 | 1 | 533 | 0.0 | 676 |
Msa0570820 | MtrunA17_Chr7g0273401 | 68.675 | 166 | 50 | 2 | 345 | 508 | 1 | 166 | 2.04e-68 | 219 |
Msa0570820 | MtrunA17_Chr7g0226791 | 32.667 | 300 | 154 | 12 | 295 | 568 | 59 | 336 | 1.05e-24 | 107 |
Msa0570820 | MtrunA17_Chr3g0116661 | 33.106 | 293 | 149 | 11 | 305 | 570 | 54 | 326 | 1.36e-24 | 106 |
Msa0570820 | MtrunA17_Chr6g0458051 | 32.867 | 286 | 147 | 10 | 308 | 568 | 91 | 356 | 3.91e-24 | 105 |
Msa0570820 | MtrunA17_Chr8g0356381 | 31.655 | 278 | 148 | 10 | 316 | 570 | 53 | 311 | 4.64e-23 | 101 |
Msa0570820 | MtrunA17_Chr3g0123481 | 34.375 | 256 | 124 | 11 | 337 | 568 | 119 | 354 | 1.10e-22 | 101 |
Msa0570820 | MtrunA17_Chr3g0130411 | 30.887 | 327 | 174 | 13 | 279 | 576 | 39 | 342 | 3.50e-22 | 99.8 |
Msa0570820 | MtrunA17_Chr8g0381321 | 34.766 | 256 | 123 | 11 | 337 | 568 | 126 | 361 | 6.75e-22 | 99.0 |
Msa0570820 | MtrunA17_Chr2g0309791 | 31.615 | 291 | 147 | 12 | 307 | 568 | 57 | 324 | 1.56e-21 | 97.4 |
Msa0570820 | MtrunA17_Chr2g0309781 | 32.292 | 288 | 146 | 15 | 307 | 568 | 49 | 313 | 1.81e-21 | 97.1 |
Msa0570820 | MtrunA17_Chr7g0273421 | 47.826 | 92 | 42 | 2 | 150 | 239 | 13 | 100 | 4.41e-21 | 88.6 |
Msa0570820 | MtrunA17_Chr6g0488261 | 30.526 | 285 | 152 | 10 | 315 | 575 | 1 | 263 | 7.93e-21 | 93.6 |
Msa0570820 | MtrunA17_Chr6g0488251 | 31.760 | 233 | 118 | 10 | 362 | 575 | 14 | 224 | 5.50e-20 | 90.9 |
Msa0570820 | MtrunA17_Chr2g0309821 | 30.888 | 259 | 131 | 11 | 343 | 575 | 81 | 317 | 9.29e-19 | 88.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0570820 | AT5G61910.4 | 70.934 | 578 | 164 | 2 | 1 | 577 | 769 | 1343 | 0.0 | 832 |
Msa0570820 | AT5G61900.3 | 70.934 | 578 | 164 | 2 | 1 | 577 | 1 | 575 | 0.0 | 827 |
Msa0570820 | AT5G61900.1 | 70.934 | 578 | 164 | 2 | 1 | 577 | 1 | 575 | 0.0 | 827 |
Msa0570820 | AT5G07300.1 | 68.056 | 576 | 183 | 1 | 1 | 575 | 1 | 576 | 0.0 | 811 |
Msa0570820 | AT1G08860.1 | 60.377 | 583 | 220 | 6 | 1 | 577 | 1 | 578 | 0.0 | 713 |
Msa0570820 | AT1G67800.4 | 35.271 | 258 | 123 | 9 | 337 | 570 | 87 | 324 | 2.17e-28 | 118 |
Msa0570820 | AT1G67800.1 | 35.271 | 258 | 123 | 9 | 337 | 570 | 87 | 324 | 2.17e-28 | 118 |
Msa0570820 | AT1G67800.3 | 35.271 | 258 | 123 | 9 | 337 | 570 | 87 | 324 | 2.17e-28 | 118 |
Msa0570820 | AT1G67800.6 | 35.271 | 258 | 123 | 9 | 337 | 570 | 87 | 324 | 2.17e-28 | 118 |
Msa0570820 | AT1G67800.2 | 35.271 | 258 | 123 | 9 | 337 | 570 | 107 | 344 | 3.12e-28 | 118 |
Msa0570820 | AT1G67800.5 | 35.271 | 258 | 123 | 9 | 337 | 570 | 107 | 344 | 3.89e-28 | 117 |
Msa0570820 | AT5G14420.3 | 33.333 | 291 | 149 | 10 | 303 | 568 | 81 | 351 | 1.08e-25 | 110 |
Msa0570820 | AT5G14420.2 | 33.333 | 291 | 149 | 10 | 303 | 568 | 81 | 351 | 1.08e-25 | 110 |
Msa0570820 | AT5G14420.4 | 33.333 | 291 | 149 | 10 | 303 | 568 | 81 | 351 | 1.08e-25 | 110 |
Msa0570820 | AT5G14420.1 | 33.333 | 291 | 149 | 10 | 303 | 568 | 81 | 351 | 1.08e-25 | 110 |
Msa0570820 | AT3G01650.2 | 32.414 | 290 | 145 | 10 | 310 | 568 | 116 | 385 | 5.18e-24 | 105 |
Msa0570820 | AT3G01650.1 | 32.414 | 290 | 145 | 10 | 310 | 568 | 116 | 385 | 5.18e-24 | 105 |
Msa0570820 | AT1G79380.1 | 30.605 | 281 | 153 | 12 | 316 | 573 | 52 | 313 | 4.03e-21 | 96.3 |
Msa0570820 | AT5G63970.2 | 31.061 | 264 | 139 | 9 | 337 | 577 | 31 | 274 | 2.25e-19 | 90.5 |
Msa0570820 | AT5G63970.1 | 31.061 | 264 | 139 | 9 | 337 | 577 | 31 | 274 | 2.25e-19 | 90.5 |
Find 137 sgRNAs with CRISPR-Local
Find 765 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGCATAAAGAACCATTAT+TGG | 0.170610 | 4_1:-73189056 | None:intergenic |
AGTACAGTTTGTTCCATTTC+GGG | 0.198239 | 4_1:+73198343 | Msa0570820:CDS |
CTTACTCTTTGGTATGAATT+TGG | 0.198746 | 4_1:-73194826 | None:intergenic |
ACCTCTCTTGAACCATTAAT+TGG | 0.240541 | 4_1:-73198687 | None:intergenic |
CGATTTCCTACGTGGGGATT+TGG | 0.249110 | 4_1:+73194965 | Msa0570820:CDS |
CTGCTTAACGTTTCTCTTGC+AGG | 0.256270 | 4_1:+73195175 | Msa0570820:CDS |
TTGTGCTAAATGCCAATTAA+TGG | 0.257223 | 4_1:+73198675 | Msa0570820:three_prime_UTR |
GTCTGTCCGTTCAAGCCTTC+TGG | 0.259870 | 4_1:+73198736 | Msa0570820:three_prime_UTR |
TTAGAAGAACAACAATTTCT+TGG | 0.262270 | 4_1:+73190262 | Msa0570820:CDS |
TAGTACAGTTTGTTCCATTT+CGG | 0.270483 | 4_1:+73198342 | Msa0570820:CDS |
TTCAGTTATATTGGATTTCC+AGG | 0.295865 | 4_1:-73198898 | None:intergenic |
TTGCATTATATTGATCCTTC+AGG | 0.316018 | 4_1:+73194799 | Msa0570820:CDS |
CTATCAGCTGCTTTATCTTC+AGG | 0.324096 | 4_1:+73198714 | Msa0570820:three_prime_UTR |
GGGATTTGAATTGAACTTCA+TGG | 0.330327 | 4_1:+73193691 | Msa0570820:CDS |
GTATCAAAAGTTGTGGAAAA+TGG | 0.333423 | 4_1:+73190905 | Msa0570820:CDS |
AAGTATTCAATATACTTTCC+TGG | 0.337996 | 4_1:+73193655 | Msa0570820:CDS |
TCTTTACATGACTAGAGATT+TGG | 0.338099 | 4_1:-73198539 | None:intergenic |
ACTTTCCTGGATTACTTGGC+TGG | 0.341165 | 4_1:+73193668 | Msa0570820:CDS |
GAGCTGGAGAAGCTCTATTC+TGG | 0.347750 | 4_1:+73193454 | Msa0570820:CDS |
GCCGGTGGCCGCACGGCAAT+CGG | 0.351066 | 4_1:+73187406 | Msa0570820:CDS |
ATTTCTTAAATCGATAAATT+CGG | 0.351739 | 4_1:+73198629 | Msa0570820:three_prime_UTR |
AATGGAAAACATGATTTGTT+GGG | 0.354279 | 4_1:+73193323 | Msa0570820:CDS |
GATACTCAGGTGTACAGATT+TGG | 0.363618 | 4_1:+73190753 | Msa0570820:CDS |
TCAATATAATGCAAAGAATC+TGG | 0.363902 | 4_1:-73194790 | None:intergenic |
ATATACTTTCCTGGATTACT+TGG | 0.364628 | 4_1:+73193664 | Msa0570820:CDS |
GAAAATAAAGTAAATAAATC+TGG | 0.383689 | 4_1:+73187235 | Msa0570820:five_prime_UTR |
TCCCATTGTTTCAACTTGAA+TGG | 0.386734 | 4_1:+73195013 | Msa0570820:CDS |
GTGTACAGATTTGGAATATA+GGG | 0.392511 | 4_1:+73190762 | Msa0570820:CDS |
ATAGATAAATAAATAAATAA+AGG | 0.394320 | 4_1:+73187277 | Msa0570820:five_prime_UTR |
TTGATCAATGTGCAAGTTCA+AGG | 0.403676 | 4_1:+73198589 | Msa0570820:three_prime_UTR |
CAATGGAAAACATGATTTGT+TGG | 0.408884 | 4_1:+73193322 | Msa0570820:CDS |
GCGTCGTTGGAAGTGTTTGC+CGG | 0.413329 | 4_1:-73187454 | None:intergenic |
GGTGTACAGATTTGGAATAT+AGG | 0.414115 | 4_1:+73190761 | Msa0570820:CDS |
GCCGATTGCCGTGCGGCCAC+CGG | 0.417940 | 4_1:-73187407 | None:intergenic |
TTGCACATTGATCAATGAAT+AGG | 0.419106 | 4_1:-73198581 | None:intergenic |
CTACTTTGAACATCCCGAAA+TGG | 0.420882 | 4_1:-73198356 | None:intergenic |
TTCCACCATTTGCTACAGAT+TGG | 0.430209 | 4_1:-73195246 | None:intergenic |
ATAATGGTTCTTTATGCAAA+AGG | 0.434192 | 4_1:+73189059 | Msa0570820:CDS |
ACCATTTGCTACAGATTGGC+TGG | 0.436179 | 4_1:-73195242 | None:intergenic |
GCAGACATCTCTGGTGGAGC+TGG | 0.441893 | 4_1:+73193438 | Msa0570820:CDS |
AGCATGAGTTCTCAGCCCTT+TGG | 0.442207 | 4_1:-73198652 | None:intergenic |
TACTTACCGTGATAATCAAC+AGG | 0.450298 | 4_1:-73195282 | None:intergenic |
TGATCGAGATGTGCTCTCTA+AGG | 0.450912 | 4_1:+73187646 | Msa0570820:CDS |
CAGAAAACTGCAGACATCTC+TGG | 0.451157 | 4_1:+73193429 | Msa0570820:intron |
ACCGACTCATTTCAACGCTA+TGG | 0.453984 | 4_1:+73187363 | Msa0570820:exon |
TCCATTCAAGTTGAAACAAT+GGG | 0.454390 | 4_1:-73195014 | None:intergenic |
GATAGGCTTGAAAGTTCATC+TGG | 0.456547 | 4_1:+73198299 | Msa0570820:CDS |
TTTGGAGCACGACCGATTGA+TGG | 0.458957 | 4_1:+73194983 | Msa0570820:CDS |
GAAGTTATCGACGGCGTCGT+TGG | 0.460192 | 4_1:-73187467 | None:intergenic |
CGTGCGGCCACCGGCGACAT+CGG | 0.465913 | 4_1:-73187398 | None:intergenic |
CTTTCCTGGATTACTTGGCT+GGG | 0.475384 | 4_1:+73193669 | Msa0570820:CDS |
CGATGTCGCCGGTGGCCGCA+CGG | 0.476914 | 4_1:+73187399 | Msa0570820:CDS |
CCTACAGTCTACACTGAACC+TGG | 0.478538 | 4_1:+73198880 | Msa0570820:three_prime_UTR |
AGACAAGATTCTACCAGATC+TGG | 0.479706 | 4_1:+73190658 | Msa0570820:CDS |
ACGGCAATCGGCGGAACTGC+CGG | 0.479741 | 4_1:+73187418 | Msa0570820:CDS |
CTCCTCCTACGCCAACGATA+AGG | 0.479761 | 4_1:-73198099 | None:intergenic |
TTGCAGGTAGAAGGCATTCA+AGG | 0.481279 | 4_1:+73195127 | Msa0570820:intron |
TTTCCTGGATTACTTGGCTG+GGG | 0.488293 | 4_1:+73193670 | Msa0570820:CDS |
TGCCGGATTCAGTAGACCTC+CGG | 0.490218 | 4_1:-73187437 | None:intergenic |
ATTGCAGCATTATTTATGAC+AGG | 0.495261 | 4_1:-73195214 | None:intergenic |
ATCCTTATCGTTGGCGTAGG+AGG | 0.496936 | 4_1:+73198097 | Msa0570820:CDS |
TGTTGTTTACCAGCTTCAAA+TGG | 0.499401 | 4_1:+73194754 | Msa0570820:intron |
AATGGAGCACTTGAGGAACT+TGG | 0.502480 | 4_1:+73189086 | Msa0570820:CDS |
AGGAGCTGATTTCAAAGAGA+TGG | 0.503459 | 4_1:+73198117 | Msa0570820:CDS |
TGCCGGAGGTCTACTGAATC+CGG | 0.503826 | 4_1:+73187435 | Msa0570820:CDS |
CCAACGATAAGGATTGATAA+TGG | 0.504163 | 4_1:-73198088 | None:intergenic |
GCTGTAGAGTGATCCAATAA+TGG | 0.504399 | 4_1:+73189043 | Msa0570820:intron |
TGGATGCAGACAAAGGAGAT+AGG | 0.507223 | 4_1:+73198282 | Msa0570820:CDS |
GTCCGTTCAAGCCTTCTGGT+TGG | 0.509090 | 4_1:+73198740 | Msa0570820:three_prime_UTR |
TGGAGTACCTGTAAAATCAA+TGG | 0.509634 | 4_1:-73193717 | None:intergenic |
GCCAGCCAATCTGTAGCAAA+TGG | 0.513378 | 4_1:+73195241 | Msa0570820:CDS |
CCCATAGCGTTGAAATGAGT+CGG | 0.514169 | 4_1:-73187364 | None:intergenic |
AAGCTCTATTCTGGTGGCCA+AGG | 0.515420 | 4_1:+73193463 | Msa0570820:CDS |
TTTATTAGTATCAAAAGTTG+TGG | 0.517406 | 4_1:+73190898 | Msa0570820:CDS |
TGCTACAACTTCAATAGCAA+TGG | 0.517499 | 4_1:+73193305 | Msa0570820:CDS |
AAGTTGAAACAATGGGAGAC+AGG | 0.519091 | 4_1:-73195007 | None:intergenic |
CCATTATCAATCCTTATCGT+TGG | 0.521967 | 4_1:+73198088 | Msa0570820:CDS |
GGCAATTATTGAGGTTGGAG+AGG | 0.522341 | 4_1:+73194916 | Msa0570820:intron |
AATCGATAAATTCGGCCAAA+GGG | 0.526630 | 4_1:+73198637 | Msa0570820:three_prime_UTR |
CTTTGTCCTGTTGATTATCA+CGG | 0.529683 | 4_1:+73195276 | Msa0570820:CDS |
TTCCTGGATTACTTGGCTGG+GGG | 0.531776 | 4_1:+73193671 | Msa0570820:CDS |
CCGACTCATTTCAACGCTAT+GGG | 0.532216 | 4_1:+73187364 | Msa0570820:exon |
TTCCATTCAAGTTGAAACAA+TGG | 0.534177 | 4_1:-73195015 | None:intergenic |
CTCCAACCAGAAGGCTTGAA+CGG | 0.534775 | 4_1:-73198742 | None:intergenic |
AATTGCTGCTCCGATGTCGC+CGG | 0.549086 | 4_1:+73187388 | Msa0570820:CDS |
AATTCAAAACTACTTCTGTC+CGG | 0.552466 | 4_1:-73189109 | None:intergenic |
TATGAATTTGGCCGTCCTGA+AGG | 0.556160 | 4_1:-73194814 | None:intergenic |
AAATCGATAAATTCGGCCAA+AGG | 0.556564 | 4_1:+73198636 | Msa0570820:three_prime_UTR |
AAAATTTGTCCACAAATAGT+CGG | 0.556612 | 4_1:-73193628 | None:intergenic |
TGAGAATCATGACCCACGGC+AGG | 0.557508 | 4_1:-73193505 | None:intergenic |
GGGTCATGATTCTCAGACCA+AGG | 0.557519 | 4_1:+73193513 | Msa0570820:CDS |
TGGGAGACAGGACCATCAAT+CGG | 0.559133 | 4_1:-73194995 | None:intergenic |
GCCAATTAATGGTTCAAGAG+AGG | 0.560935 | 4_1:+73198686 | Msa0570820:three_prime_UTR |
TCAATCCTTATCGTTGGCGT+AGG | 0.573889 | 4_1:+73198094 | Msa0570820:CDS |
CGATCTGAGAGAAGAGACCT+TGG | 0.574746 | 4_1:-73187507 | None:intergenic |
CCAGGTTCAGTGTAGACTGT+AGG | 0.578817 | 4_1:-73198880 | None:intergenic |
TGCTGCTCCGATGTCGCCGG+TGG | 0.582433 | 4_1:+73187391 | Msa0570820:CDS |
GGTGGCCGCACGGCAATCGG+CGG | 0.582485 | 4_1:+73187409 | Msa0570820:CDS |
ATGGAAAACATGATTTGTTG+GGG | 0.584941 | 4_1:+73193324 | Msa0570820:CDS |
AGAACAACAATTTCTTGGTG+AGG | 0.589436 | 4_1:+73190267 | Msa0570820:CDS |
GACAAGCGATTTCCTACGTG+GGG | 0.590517 | 4_1:+73194959 | Msa0570820:CDS |
AAAATAAAACTCCAACCAGA+AGG | 0.591296 | 4_1:-73198751 | None:intergenic |
AGATGCACTTGTTAAAGCAT+CGG | 0.592040 | 4_1:+73198060 | Msa0570820:CDS |
TACATGACTAGAGATTTGGT+TGG | 0.595044 | 4_1:-73198535 | None:intergenic |
TGAATTCGTTGAGTCCGACA+TGG | 0.595147 | 4_1:+73189126 | Msa0570820:CDS |
CTACTAGGATGGAGTTGTGA+CGG | 0.599974 | 4_1:+73198021 | Msa0570820:intron |
TGTTCAACAAGTAGGAAGCA+AGG | 0.601240 | 4_1:+73191003 | Msa0570820:CDS |
TATAATGCAAAGAATCTGGA+AGG | 0.602030 | 4_1:-73194786 | None:intergenic |
TTCAAGTCTCGTGGCTACCA+AGG | 0.609125 | 4_1:+73187490 | Msa0570820:CDS |
GAGCACTTGAGGAACTTGGC+CGG | 0.609390 | 4_1:+73189090 | Msa0570820:CDS |
AGCTGATTTCAAAGAGATGG+AGG | 0.615204 | 4_1:+73198120 | Msa0570820:CDS |
CAGACAAGCGATTTCCTACG+TGG | 0.619290 | 4_1:+73194957 | Msa0570820:CDS |
CAGATCTTGGATGCAGACAA+AGG | 0.620101 | 4_1:+73198275 | Msa0570820:intron |
AAAACTGCAGACATCTCTGG+TGG | 0.621038 | 4_1:+73193432 | Msa0570820:CDS |
TTGTAGCACTCTATTAACAA+AGG | 0.621510 | 4_1:-73193290 | None:intergenic |
GTTTGTTTAGTAATCCATGT+CGG | 0.622631 | 4_1:-73189140 | None:intergenic |
CTACAGTAGAGATGATACTC+AGG | 0.624513 | 4_1:+73190740 | Msa0570820:CDS |
CGATAAGGATTGATAATGGT+AGG | 0.628743 | 4_1:-73198084 | None:intergenic |
GTTTCACAACACAGACGTGA+AGG | 0.631495 | 4_1:+73189317 | Msa0570820:CDS |
AGAATGATCACAATCCAACA+TGG | 0.632845 | 4_1:+73190963 | Msa0570820:CDS |
CTGGAGAAGCTCTATTCTGG+TGG | 0.643477 | 4_1:+73193457 | Msa0570820:CDS |
AGGCATTCAAGGAATCATGA+TGG | 0.645806 | 4_1:+73195138 | Msa0570820:CDS |
GATAACTTCTTCAAGTCTCG+TGG | 0.649983 | 4_1:+73187481 | Msa0570820:CDS |
AGCCAATCTGTAGCAAATGG+TGG | 0.650165 | 4_1:+73195244 | Msa0570820:CDS |
GGTCTGAGAATCATGACCCA+CGG | 0.650774 | 4_1:-73193509 | None:intergenic |
AGGTCTCTTCTCTCAGATCG+AGG | 0.653280 | 4_1:+73187510 | Msa0570820:CDS |
GGCAACTTGTGCATTATCTG+AGG | 0.654797 | 4_1:+73190288 | Msa0570820:CDS |
GCAATCGGCGGAACTGCCGG+AGG | 0.657783 | 4_1:+73187421 | Msa0570820:CDS |
AGACAAGCGATTTCCTACGT+GGG | 0.662700 | 4_1:+73194958 | Msa0570820:CDS |
ATTATATTGATCCTTCAGGA+CGG | 0.664600 | 4_1:+73194803 | Msa0570820:CDS |
ATTTGAATTGAACTTCATGG+TGG | 0.674358 | 4_1:+73193694 | Msa0570820:CDS |
GTGTATGCTGAGGAATGTGT+TGG | 0.678518 | 4_1:+73190709 | Msa0570820:CDS |
CAGTTCCGCCGATTGCCGTG+CGG | 0.691284 | 4_1:-73187414 | None:intergenic |
AGACTTGAAGAAGTTATCGA+CGG | 0.701794 | 4_1:-73187476 | None:intergenic |
GAAGCTCAAAGTGTATGCTG+AGG | 0.705846 | 4_1:+73190699 | Msa0570820:CDS |
CGTGCTCCAAATCCCCACGT+AGG | 0.721272 | 4_1:-73194971 | None:intergenic |
TGGAAGCAATACTTACTGTG+AGG | 0.795076 | 4_1:+73195033 | Msa0570820:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAAATAAAAATATATTA+AGG | + | chr4_1:73196302-73196321 | Msa0570820:intron | 0.0% |
!! | AATAAATAAAAATATATTAA+GGG | + | chr4_1:73196303-73196322 | Msa0570820:intron | 0.0% |
!! | TTGTTAATTAATAATGATTA+AGG | + | chr4_1:73187744-73187763 | Msa0570820:intron | 10.0% |
!! | ATTATTATTGCTAATAATTA+AGG | + | chr4_1:73188387-73188406 | Msa0570820:intron | 10.0% |
!! | AAAAAAATTGCATTAATTTA+TGG | + | chr4_1:73189614-73189633 | Msa0570820:intron | 10.0% |
!! | AACAACATTATTATAAAAAT+AGG | - | chr4_1:73191901-73191920 | None:intergenic | 10.0% |
!!! | CATAGTTAAATATTATTTTA+GGG | - | chr4_1:73193591-73193610 | None:intergenic | 10.0% |
!!! | TCATAGTTAAATATTATTTT+AGG | - | chr4_1:73193592-73193611 | None:intergenic | 10.0% |
!!! | GTATTTTTTATTTATTAAAG+AGG | + | chr4_1:73194287-73194306 | Msa0570820:intron | 10.0% |
!! | TAGTATATAAATAATTCTTA+GGG | - | chr4_1:73195872-73195891 | None:intergenic | 10.0% |
!! | AGAAATATTAAAAATGAAAA+GGG | - | chr4_1:73198615-73198634 | None:intergenic | 10.0% |
!! | AAGAAATATTAAAAATGAAA+AGG | - | chr4_1:73198616-73198635 | None:intergenic | 10.0% |
!! | CAAAATACAGATATTAAAAA+AGG | - | chr4_1:73187174-73187193 | None:intergenic | 15.0% |
!!! | TTTATTTTCTTGTTATTTTG+TGG | - | chr4_1:73187224-73187243 | None:intergenic | 15.0% |
!! | GAAAATAAAGTAAATAAATC+TGG | + | chr4_1:73187235-73187254 | Msa0570820:five_prime_UTR | 15.0% |
!! | ACAAGATTCTTAAAATAAAT+GGG | - | chr4_1:73189460-73189479 | None:intergenic | 15.0% |
!! | TACAAGATTCTTAAAATAAA+TGG | - | chr4_1:73189461-73189480 | None:intergenic | 15.0% |
!! | AAAAAATCTTGAACTAAAAA+AGG | - | chr4_1:73189781-73189800 | None:intergenic | 15.0% |
!!! | ATCATAGAATATGATTTTTT+TGG | + | chr4_1:73189923-73189942 | Msa0570820:intron | 15.0% |
!! | AGAAAAACAATAATAATGAA+TGG | - | chr4_1:73190404-73190423 | None:intergenic | 15.0% |
!!! | TTTTCAGTTTTTAGAATATT+AGG | + | chr4_1:73190452-73190471 | Msa0570820:intron | 15.0% |
!!! | TATATTTTCAGTAAAACATA+GGG | - | chr4_1:73190537-73190556 | None:intergenic | 15.0% |
!!! | ATATATTTTCAGTAAAACAT+AGG | - | chr4_1:73190538-73190557 | None:intergenic | 15.0% |
!!! | ACTTTTGATACTAATAAAAA+GGG | - | chr4_1:73190896-73190915 | None:intergenic | 15.0% |
!!! | AACTTTTGATACTAATAAAA+AGG | - | chr4_1:73190897-73190916 | None:intergenic | 15.0% |
!!! | TTTATTAATTTGATACTTCT+TGG | - | chr4_1:73191235-73191254 | None:intergenic | 15.0% |
!!! | TATTTTGTTTGTTGAAATTT+AGG | + | chr4_1:73191270-73191289 | Msa0570820:intron | 15.0% |
!!! | ATTTTGTTTGTTGAAATTTA+GGG | + | chr4_1:73191271-73191290 | Msa0570820:intron | 15.0% |
!! | AATACTTACATAGAAATATT+AGG | - | chr4_1:73191368-73191387 | None:intergenic | 15.0% |
!!! | CCAAATTTTTACATAAAATA+TGG | - | chr4_1:73191935-73191954 | None:intergenic | 15.0% |
!!! | CCATATTTTATGTAAAAATT+TGG | + | chr4_1:73191932-73191951 | Msa0570820:intron | 15.0% |
!!! | AGAAAACAAAAGAAATTTTA+TGG | - | chr4_1:73192018-73192037 | None:intergenic | 15.0% |
!!! | TGCTAATTTTTTTAACTATT+AGG | + | chr4_1:73192110-73192129 | Msa0570820:intron | 15.0% |
!!! | GCTAATTTTTTTAACTATTA+GGG | + | chr4_1:73192111-73192130 | Msa0570820:intron | 15.0% |
!! | AATTTAATATAACAAAACCT+TGG | - | chr4_1:73193533-73193552 | None:intergenic | 15.0% |
!! | ATAATATTTAACTATGACAA+AGG | + | chr4_1:73193595-73193614 | Msa0570820:intron | 15.0% |
!!! | AGTTTTAACTTTTTAAGTTT+AGG | + | chr4_1:73193880-73193899 | Msa0570820:intron | 15.0% |
!! | CAATACATATTTAAATCTTA+TGG | - | chr4_1:73193938-73193957 | None:intergenic | 15.0% |
!! | AAGATTTAAATATGTATTGT+AGG | + | chr4_1:73193939-73193958 | Msa0570820:intron | 15.0% |
!! | CATAATGATATAAACTAAAA+AGG | - | chr4_1:73194033-73194052 | None:intergenic | 15.0% |
!! | AATTATATCATTTCATAATC+CGG | - | chr4_1:73194632-73194651 | None:intergenic | 15.0% |
!! | AGAACTTAAAATTCATTATA+TGG | - | chr4_1:73195540-73195559 | None:intergenic | 15.0% |
!!! | AATTGTGAGATATTTTTTTT+AGG | - | chr4_1:73195658-73195677 | None:intergenic | 15.0% |
!! | TTATTCTTCAAAATTTACTA+TGG | - | chr4_1:73195692-73195711 | None:intergenic | 15.0% |
!! | TATATTATAACATAATTGGT+GGG | - | chr4_1:73195769-73195788 | None:intergenic | 15.0% |
!! | AGTGTATATTATAACATAAT+TGG | - | chr4_1:73195773-73195792 | None:intergenic | 15.0% |
!!! | TTTTAGGTTTTTATTTTCAA+GGG | - | chr4_1:73195801-73195820 | None:intergenic | 15.0% |
!!! | ATTTTAGGTTTTTATTTTCA+AGG | - | chr4_1:73195802-73195821 | None:intergenic | 15.0% |
!! | AGTATATAAATAATTCTTAG+GGG | - | chr4_1:73195871-73195890 | None:intergenic | 15.0% |
!! | GTAGTATATAAATAATTCTT+AGG | - | chr4_1:73195873-73195892 | None:intergenic | 15.0% |
!!! | TTTAAATACCCATATTTTAA+TGG | + | chr4_1:73196060-73196079 | Msa0570820:intron | 15.0% |
!! | AAATAAAAATATATTAAGGG+AGG | + | chr4_1:73196306-73196325 | Msa0570820:intron | 15.0% |
!! | AATAAAAATATATTAAGGGA+GGG | + | chr4_1:73196307-73196326 | Msa0570820:intron | 15.0% |
!! | ATTATATAAGTAGAATTAGA+AGG | + | chr4_1:73196606-73196625 | Msa0570820:intron | 15.0% |
!!! | ATATTCTAAAGAAAATTGTA+TGG | + | chr4_1:73197498-73197517 | Msa0570820:intron | 15.0% |
!! | ATTCAAAATTAGATGTTATA+AGG | + | chr4_1:73197599-73197618 | Msa0570820:intron | 15.0% |
!! | TTCAAAATTAGATGTTATAA+GGG | + | chr4_1:73197600-73197619 | Msa0570820:intron | 15.0% |
!! | ATTTCTTAAATCGATAAATT+CGG | + | chr4_1:73198629-73198648 | Msa0570820:three_prime_UTR | 15.0% |
!!! | AAAAAAGTATTCAGTTATAT+TGG | - | chr4_1:73198910-73198929 | None:intergenic | 15.0% |
!!! | AAAATTGATTGAAGTAGTTT+TGG | - | chr4_1:73187573-73187592 | None:intergenic | 20.0% |
!! | TTGAAAAAGAAATTTGTACT+TGG | + | chr4_1:73188095-73188114 | Msa0570820:intron | 20.0% |
!! | TGAAAAAGAAATTTGTACTT+GGG | + | chr4_1:73188096-73188115 | Msa0570820:intron | 20.0% |
!! | AAATTAATTGCATTGCATTA+TGG | - | chr4_1:73188484-73188503 | None:intergenic | 20.0% |
!! | AAGCATAACATTTCATTTAA+AGG | - | chr4_1:73188969-73188988 | None:intergenic | 20.0% |
!!! | ATGAAATGTTATGCTTTTAA+TGG | + | chr4_1:73188973-73188992 | Msa0570820:intron | 20.0% |
!!! | GTTCAAGATTTTTTTTAATG+AGG | + | chr4_1:73189787-73189806 | Msa0570820:intron | 20.0% |
!!! | CTTAGAATTTTATTTCCTAA+TGG | + | chr4_1:73190046-73190065 | Msa0570820:intron | 20.0% |
!! | CAAGATATTAATTTACTATG+CGG | + | chr4_1:73190132-73190151 | Msa0570820:intron | 20.0% |
!! | AAGTTCAAATTGTAACTATT+TGG | + | chr4_1:73190217-73190236 | Msa0570820:intron | 20.0% |
!! | TTATTTAGTTGTCTAATATC+AGG | - | chr4_1:73190343-73190362 | None:intergenic | 20.0% |
!! | TTTATTAGTATCAAAAGTTG+TGG | + | chr4_1:73190898-73190917 | Msa0570820:CDS | 20.0% |
!! | CAATTATAATTTATAACGAC+TGG | + | chr4_1:73191066-73191085 | Msa0570820:intron | 20.0% |
!! | AATTTATTCTTCAATCTCAT+CGG | - | chr4_1:73191612-73191631 | None:intergenic | 20.0% |
!! | GTTAAAAAAATTAGCATAGT+TGG | - | chr4_1:73192106-73192125 | None:intergenic | 20.0% |
!!! | CAACTTTTATTTAAGATATG+AGG | + | chr4_1:73192238-73192257 | Msa0570820:intron | 20.0% |
!! | AACTTATAATGAAAATGTGT+TGG | + | chr4_1:73192430-73192449 | Msa0570820:intron | 20.0% |
!! | TGGCTTATTAAAAAAAATGT+TGG | + | chr4_1:73192971-73192990 | Msa0570820:intron | 20.0% |
!! | GACAATCATAGAATATAATT+AGG | - | chr4_1:73193764-73193783 | None:intergenic | 20.0% |
!! | ATGATTGTCATATTTGTAAT+AGG | + | chr4_1:73193775-73193794 | Msa0570820:intron | 20.0% |
!!! | AAATCGTTTACTCAATTTTT+TGG | + | chr4_1:73194112-73194131 | Msa0570820:intron | 20.0% |
!!! | TACTCAATTTTTTGGAAATA+TGG | + | chr4_1:73194120-73194139 | Msa0570820:intron | 20.0% |
!! | ATATCTACATTAACTATGAA+GGG | - | chr4_1:73194171-73194190 | None:intergenic | 20.0% |
!! | AATATCTACATTAACTATGA+AGG | - | chr4_1:73194172-73194191 | None:intergenic | 20.0% |
!! | TAACTAATAAATTGGATGAT+GGG | - | chr4_1:73194379-73194398 | None:intergenic | 20.0% |
!! | AAAAATCATTTCTTACTCTT+TGG | - | chr4_1:73194840-73194859 | None:intergenic | 20.0% |
!!! | ATATTTTTAGGCAATTATTG+AGG | + | chr4_1:73194907-73194926 | Msa0570820:intron | 20.0% |
!! | TTATTTCAATATAGCAACAA+AGG | - | chr4_1:73195082-73195101 | None:intergenic | 20.0% |
!! | CATCGTATAAATTAAATGAA+GGG | - | chr4_1:73195576-73195595 | None:intergenic | 20.0% |
!! | TCATCGTATAAATTAAATGA+AGG | - | chr4_1:73195577-73195596 | None:intergenic | 20.0% |
!! | AATACAAGCATAATTTCAAA+AGG | - | chr4_1:73195607-73195626 | None:intergenic | 20.0% |
!! | ATATTATAACATAATTGGTG+GGG | - | chr4_1:73195768-73195787 | None:intergenic | 20.0% |
!! | GTATATTATAACATAATTGG+TGG | - | chr4_1:73195770-73195789 | None:intergenic | 20.0% |
!! | CACTAAAACCATTAAAATAT+GGG | - | chr4_1:73196071-73196090 | None:intergenic | 20.0% |
!! | TCACTAAAACCATTAAAATA+TGG | - | chr4_1:73196072-73196091 | None:intergenic | 20.0% |
!!! | GTTACATGACTATTTTATTT+AGG | + | chr4_1:73196650-73196669 | Msa0570820:intron | 20.0% |
!! | TATATTGTATTTGGATGTAA+GGG | - | chr4_1:73196826-73196845 | None:intergenic | 20.0% |
!! | ATATATTGTATTTGGATGTA+AGG | - | chr4_1:73196827-73196846 | None:intergenic | 20.0% |
!! | GTTGCAAAATATATTGTATT+TGG | - | chr4_1:73196835-73196854 | None:intergenic | 20.0% |
!! | ACAAAATAATTAGTGAACAT+GGG | - | chr4_1:73197004-73197023 | None:intergenic | 20.0% |
!! | AACAAAATAATTAGTGAACA+TGG | - | chr4_1:73197005-73197024 | None:intergenic | 20.0% |
!!! | TTTCTTTAGAATATCTTAAG+AGG | - | chr4_1:73197492-73197511 | None:intergenic | 20.0% |
!! | TCTTAACTCAAAGTTATAAT+TGG | + | chr4_1:73198171-73198190 | Msa0570820:intron | 20.0% |
! | TTGATTAATTTAATGTGCAC+AGG | - | chr4_1:73187793-73187812 | None:intergenic | 25.0% |
!! | TGATTGTATTTTACTTGTGA+TGG | + | chr4_1:73187892-73187911 | Msa0570820:intron | 25.0% |
! | TCCAAAATTAAGATATGTTG+AGG | + | chr4_1:73187972-73187991 | Msa0570820:intron | 25.0% |
! | CCAAAATTAAGATATGTTGA+GGG | + | chr4_1:73187973-73187992 | Msa0570820:intron | 25.0% |
! | CAAAATTAAGATATGTTGAG+GGG | + | chr4_1:73187974-73187993 | Msa0570820:intron | 25.0% |
! | AAAATTAAGATATGTTGAGG+GGG | + | chr4_1:73187975-73187994 | Msa0570820:intron | 25.0% |
! | TTTGCTCCAAATTAATGAAT+TGG | - | chr4_1:73188687-73188706 | None:intergenic | 25.0% |
! | AGATTTACAGCTAACAAAAT+TGG | + | chr4_1:73188734-73188753 | Msa0570820:intron | 25.0% |
! | CAGTATAAACAAATTACGAA+GGG | - | chr4_1:73188938-73188957 | None:intergenic | 25.0% |
! | TTTGCATAAAGAACCATTAT+TGG | - | chr4_1:73189059-73189078 | None:intergenic | 25.0% |
! | ATAATGGTTCTTTATGCAAA+AGG | + | chr4_1:73189059-73189078 | Msa0570820:CDS | 25.0% |
! | CTTTATGCAAAAGGAAAAAA+TGG | + | chr4_1:73189068-73189087 | Msa0570820:CDS | 25.0% |
!! | AACTCTCATTTATCATTTTG+AGG | + | chr4_1:73189160-73189179 | Msa0570820:CDS | 25.0% |
!! | TCTTTTTATCATTACCTGTT+AGG | + | chr4_1:73189553-73189572 | Msa0570820:intron | 25.0% |
!! | CTTTTTATCATTACCTGTTA+GGG | + | chr4_1:73189554-73189573 | Msa0570820:intron | 25.0% |
!! | TTTTTATCATTACCTGTTAG+GGG | + | chr4_1:73189555-73189574 | Msa0570820:intron | 25.0% |
! | GATACTATCATATTATCACA+TGG | + | chr4_1:73189660-73189679 | Msa0570820:intron | 25.0% |
!!! | CAATTTATGTTTTTGCATGT+CGG | + | chr4_1:73189714-73189733 | Msa0570820:intron | 25.0% |
! | ATAAAATTCTAAGTGCAGTT+GGG | - | chr4_1:73190039-73190058 | None:intergenic | 25.0% |
! | AATAAAATTCTAAGTGCAGT+TGG | - | chr4_1:73190040-73190059 | None:intergenic | 25.0% |
! | TTAGAAGAACAACAATTTCT+TGG | + | chr4_1:73190262-73190281 | Msa0570820:CDS | 25.0% |
! | AAAATTTACTACACTCTCAA+TGG | + | chr4_1:73190362-73190381 | Msa0570820:intron | 25.0% |
!!! | TTATTGTTTTTCTCTGTCAA+TGG | + | chr4_1:73190411-73190430 | Msa0570820:intron | 25.0% |
! | GGGTATTATACTATTATTGT+TGG | - | chr4_1:73190568-73190587 | None:intergenic | 25.0% |
!! | TTTTTGAATGTTCAACAAGT+AGG | + | chr4_1:73190995-73191014 | Msa0570820:CDS | 25.0% |
!! | TAATTGCACATTTTACTATC+CGG | - | chr4_1:73191052-73191071 | None:intergenic | 25.0% |
! | TACAGGTTATTAATGTTGTT+TGG | - | chr4_1:73191172-73191191 | None:intergenic | 25.0% |
!! | AGATTTAGAATGAGATATAG+CGG | + | chr4_1:73191208-73191227 | Msa0570820:intron | 25.0% |
!! | ATAGAATACTGTTATTTGTC+TGG | - | chr4_1:73191404-73191423 | None:intergenic | 25.0% |
! | GATGAGATTGAAGAATAAAT+TGG | + | chr4_1:73191611-73191630 | Msa0570820:intron | 25.0% |
!! | AGAATACCATGCTAATTTTT+AGG | + | chr4_1:73191706-73191725 | Msa0570820:intron | 25.0% |
!!! | CATGCTAATTTTTAGGAAAT+GGG | + | chr4_1:73191713-73191732 | Msa0570820:intron | 25.0% |
! | CACTAACCTAATAATATGTT+AGG | + | chr4_1:73191800-73191819 | Msa0570820:intron | 25.0% |
! | ACTAGACCTAACATATTATT+AGG | - | chr4_1:73191809-73191828 | None:intergenic | 25.0% |
! | CACTAACAATCTATTATGTT+GGG | - | chr4_1:73191868-73191887 | None:intergenic | 25.0% |
!! | TTTTCTAAATATTCCCTCAA+TGG | + | chr4_1:73192032-73192051 | Msa0570820:intron | 25.0% |
!! | ATTTAAGATATGAGGTTGAA+AGG | + | chr4_1:73192246-73192265 | Msa0570820:intron | 25.0% |
! | GTTCTATCAAAAACCATATT+TGG | + | chr4_1:73192574-73192593 | Msa0570820:intron | 25.0% |
! | ATTTATTGTTACCCTAACTA+TGG | + | chr4_1:73193146-73193165 | Msa0570820:intron | 25.0% |
!! | ATCACTTTATCTTCTTGTTT+GGG | + | chr4_1:73193190-73193209 | Msa0570820:intron | 25.0% |
!! | ATCTCATTTTCATTACATAC+AGG | + | chr4_1:73193262-73193281 | Msa0570820:intron | 25.0% |
!!! | AATGGAAAACATGATTTGTT+GGG | + | chr4_1:73193323-73193342 | Msa0570820:CDS | 25.0% |
! | AAATAGATTTAAGGGACAAA+AGG | - | chr4_1:73193368-73193387 | None:intergenic | 25.0% |
! | TAAAATAGGATAAACAACTC+TGG | - | chr4_1:73193408-73193427 | None:intergenic | 25.0% |
! | ACAAAAATAAATGTTCTCCT+TGG | - | chr4_1:73193483-73193502 | None:intergenic | 25.0% |
!!! | ATTATTTTAGGGAAAGATAG+AGG | - | chr4_1:73193580-73193599 | None:intergenic | 25.0% |
! | AAAATTTGTCCACAAATAGT+CGG | - | chr4_1:73193631-73193650 | None:intergenic | 25.0% |
! | AAGTATTCAATATACTTTCC+TGG | + | chr4_1:73193655-73193674 | Msa0570820:CDS | 25.0% |
!!! | CGAATTCGTTTTTAGTTATT+TGG | + | chr4_1:73193798-73193817 | Msa0570820:intron | 25.0% |
! | AAAAACACTAGAACTTCTTA+TGG | - | chr4_1:73193991-73194010 | None:intergenic | 25.0% |
! | AAAACTAATCCTATAATGCA+AGG | - | chr4_1:73194228-73194247 | None:intergenic | 25.0% |
!!! | TTGCAAAATTAGTCTTTTGA+TGG | + | chr4_1:73194246-73194265 | Msa0570820:intron | 25.0% |
!!! | AAAATTAGTCTTTTGATGGT+AGG | + | chr4_1:73194250-73194269 | Msa0570820:intron | 25.0% |
! | AAGAGGATAACAATTATGTA+TGG | + | chr4_1:73194304-73194323 | Msa0570820:intron | 25.0% |
! | AACTAATAAATTGGATGATG+GGG | - | chr4_1:73194378-73194397 | None:intergenic | 25.0% |
! | CTAACTAATAAATTGGATGA+TGG | - | chr4_1:73194380-73194399 | None:intergenic | 25.0% |
! | AGTAAAATGTTCATACTTCT+CGG | + | chr4_1:73194421-73194440 | Msa0570820:intron | 25.0% |
! | ACATTATAGTTTATAAGCGT+TGG | + | chr4_1:73194657-73194676 | Msa0570820:intron | 25.0% |
! | TCAATATAATGCAAAGAATC+TGG | - | chr4_1:73194793-73194812 | None:intergenic | 25.0% |
! | ATCAGTAACAAATAAAGTAG+TGG | - | chr4_1:73194874-73194893 | None:intergenic | 25.0% |
!! | TATGTTGGTTATAATTGATG+TGG | + | chr4_1:73195352-73195371 | Msa0570820:intron | 25.0% |
! | AATTAAATGAAGGGATTGTT+CGG | - | chr4_1:73195567-73195586 | None:intergenic | 25.0% |
! | TATATGATCATATGAAGAGT+AGG | - | chr4_1:73195635-73195654 | None:intergenic | 25.0% |
! | TATTATAACATAATTGGTGG+GGG | - | chr4_1:73195767-73195786 | None:intergenic | 25.0% |
!!! | AGGGGAGTATAATTTATTTT+AGG | - | chr4_1:73195817-73195836 | None:intergenic | 25.0% |
! | TATAAATAATTCTTAGGGGA+GGG | - | chr4_1:73195867-73195886 | None:intergenic | 25.0% |
! | ATATAAATAATTCTTAGGGG+AGG | - | chr4_1:73195868-73195887 | None:intergenic | 25.0% |
!!! | AATTGTTTTGTCTTGAATAG+TGG | - | chr4_1:73195951-73195970 | None:intergenic | 25.0% |
!!! | AGTGTAGATTTTAACATTAG+AGG | + | chr4_1:73196331-73196350 | Msa0570820:intron | 25.0% |
!!! | GTGTAGATTTTAACATTAGA+GGG | + | chr4_1:73196332-73196351 | Msa0570820:intron | 25.0% |
!!! | TGTAGATTTTAACATTAGAG+GGG | + | chr4_1:73196333-73196352 | Msa0570820:intron | 25.0% |
! | TGTAATTCAATCTTCTTTCA+AGG | + | chr4_1:73196364-73196383 | Msa0570820:intron | 25.0% |
! | GTAATTCAATCTTCTTTCAA+GGG | + | chr4_1:73196365-73196384 | Msa0570820:intron | 25.0% |
!!! | TCTAATATTTTTTGCATGAG+AGG | + | chr4_1:73196406-73196425 | Msa0570820:intron | 25.0% |
!!! | CTAATATTTTTTGCATGAGA+GGG | + | chr4_1:73196407-73196426 | Msa0570820:intron | 25.0% |
!!! | TAATATTTTTTGCATGAGAG+GGG | + | chr4_1:73196408-73196427 | Msa0570820:intron | 25.0% |
!!! | AGTGTATATTTTGACATAAG+AGG | + | chr4_1:73196436-73196455 | Msa0570820:intron | 25.0% |
!!! | GTGTATATTTTGACATAAGA+GGG | + | chr4_1:73196437-73196456 | Msa0570820:intron | 25.0% |
!!! | TGTATATTTTGACATAAGAG+GGG | + | chr4_1:73196438-73196457 | Msa0570820:intron | 25.0% |
!!! | ATGACTAGTAGCTTTATTTT+GGG | - | chr4_1:73196508-73196527 | None:intergenic | 25.0% |
!!! | AATGACTAGTAGCTTTATTT+TGG | - | chr4_1:73196509-73196528 | None:intergenic | 25.0% |
! | TGTATTCATATATGTATTCC+TGG | - | chr4_1:73196573-73196592 | None:intergenic | 25.0% |
! | CTTATCTTAGAGTAACTAAA+AGG | + | chr4_1:73196759-73196778 | Msa0570820:intron | 25.0% |
! | ATATTGTATTTGGATGTAAG+GGG | - | chr4_1:73196825-73196844 | None:intergenic | 25.0% |
!! | TACAATATATTTTGCAACCT+AGG | + | chr4_1:73196837-73196856 | Msa0570820:intron | 25.0% |
! | TTACTAACAATTATCTCGAT+AGG | + | chr4_1:73197249-73197268 | Msa0570820:intron | 25.0% |
!! | AAGATATCATAAGAAGTGTA+TGG | + | chr4_1:73197716-73197735 | Msa0570820:intron | 25.0% |
! | ATGTTATTCAATATACTGCA+TGG | + | chr4_1:73197796-73197815 | Msa0570820:intron | 25.0% |
! | TGTTATTCAATATACTGCAT+GGG | + | chr4_1:73197797-73197816 | Msa0570820:intron | 25.0% |
! | GTTGGAATAGATAATTGTTT+GGG | - | chr4_1:73197930-73197949 | None:intergenic | 25.0% |
! | AGTTGGAATAGATAATTGTT+TGG | - | chr4_1:73197931-73197950 | None:intergenic | 25.0% |
! | AACTCAAAGTTATAATTGGT+TGG | + | chr4_1:73198175-73198194 | Msa0570820:intron | 25.0% |
! | ATATACGCTAAAAATTGAGT+AGG | - | chr4_1:73198500-73198519 | None:intergenic | 25.0% |
!! | TTTCTTGTGTTCTTTCTTTT+TGG | + | chr4_1:73198771-73198790 | Msa0570820:three_prime_UTR | 25.0% |
!!! | TTCTTTCTTTTTGGTTTTTC+TGG | + | chr4_1:73198780-73198799 | Msa0570820:three_prime_UTR | 25.0% |
!!! | TCTTTCTTTTTGGTTTTTCT+GGG | + | chr4_1:73198781-73198800 | Msa0570820:three_prime_UTR | 25.0% |
!! | TTTTACTTGTGATGGAGTAT+TGG | + | chr4_1:73187900-73187919 | Msa0570820:intron | 30.0% |
! | CCCTCAACATATCTTAATTT+TGG | - | chr4_1:73187976-73187995 | None:intergenic | 30.0% |
! | CTATTTGACAATACTGGTTA+TGG | - | chr4_1:73188157-73188176 | None:intergenic | 30.0% |
TAACCAGTATTGTCAAATAG+CGG | + | chr4_1:73188157-73188176 | Msa0570820:intron | 30.0% | |
!! | AAGTACAAAGTGTTGTCAAA+TGG | + | chr4_1:73188227-73188246 | Msa0570820:intron | 30.0% |
! | TTTTTGATCTGGATTTTCTG+TGG | - | chr4_1:73188450-73188469 | None:intergenic | 30.0% |
! | CCTGAATTTTCTTTTTGATC+TGG | - | chr4_1:73188461-73188480 | None:intergenic | 30.0% |
CCAGATCAAAAAGAAAATTC+AGG | + | chr4_1:73188458-73188477 | Msa0570820:intron | 30.0% | |
!!! | TGTTGTTTTTACCACCTTAA+AGG | + | chr4_1:73188647-73188666 | Msa0570820:intron | 30.0% |
CCAAATTAATGAATTGGATC+CGG | - | chr4_1:73188681-73188700 | None:intergenic | 30.0% | |
TTTGCTGAACTATGTTAACA+AGG | - | chr4_1:73188881-73188900 | None:intergenic | 30.0% | |
CCAGTATAAACAAATTACGA+AGG | - | chr4_1:73188939-73188958 | None:intergenic | 30.0% | |
!! | CCTTCGTAATTTGTTTATAC+TGG | + | chr4_1:73188936-73188955 | Msa0570820:intron | 30.0% |
ATTCTCATTATTCAGTTGCA+TGG | + | chr4_1:73189000-73189019 | Msa0570820:intron | 30.0% | |
AATTCAAAACTACTTCTGTC+CGG | - | chr4_1:73189112-73189131 | None:intergenic | 30.0% | |
GTTTGTTTAGTAATCCATGT+CGG | - | chr4_1:73189143-73189162 | None:intergenic | 30.0% | |
!!! | TTATCATTTTGAGGTTGTTC+AGG | + | chr4_1:73189169-73189188 | Msa0570820:CDS | 30.0% |
GAAATTTACAGAACAATTCC+TGG | - | chr4_1:73189259-73189278 | None:intergenic | 30.0% | |
CTGTAAATTTCTTTCATCAC+AGG | + | chr4_1:73189268-73189287 | Msa0570820:intron | 30.0% | |
CTTACACATTCATACAGAAA+GGG | - | chr4_1:73189843-73189862 | None:intergenic | 30.0% | |
ACTTACACATTCATACAGAA+AGG | - | chr4_1:73189844-73189863 | None:intergenic | 30.0% | |
! | TTATAGTGTTGCAGCATTTT+AGG | + | chr4_1:73189864-73189883 | Msa0570820:intron | 30.0% |
ATCTTGTCAACTAAACAACT+TGG | - | chr4_1:73190118-73190137 | None:intergenic | 30.0% | |
! | TATCTGAGGTAATTTAGAGA+CGG | + | chr4_1:73190302-73190321 | Msa0570820:intron | 30.0% |
!! | TATTTTGAGTAAGCACTTCT+TGG | - | chr4_1:73190509-73190528 | None:intergenic | 30.0% |
! | GACAAATTGTTGTTGTTGAT+GGG | - | chr4_1:73190588-73190607 | None:intergenic | 30.0% |
! | GTGTACAGATTTGGAATATA+GGG | + | chr4_1:73190762-73190781 | Msa0570820:CDS | 30.0% |
ACAATTGATGTTCCTTCATA+AGG | - | chr4_1:73190839-73190858 | None:intergenic | 30.0% | |
GTATCAAAAGTTGTGGAAAA+TGG | + | chr4_1:73190905-73190924 | Msa0570820:CDS | 30.0% | |
! | CTGTTTTGCATATAGGAATA+TGG | - | chr4_1:73190934-73190953 | None:intergenic | 30.0% |
! | ATAGCTTCTGTTTTGCATAT+AGG | - | chr4_1:73190941-73190960 | None:intergenic | 30.0% |
CATTCTAAATCTAAACAGAC+AGG | - | chr4_1:73191200-73191219 | None:intergenic | 30.0% | |
TTGTTGAAATTTAGGGAGTA+TGG | + | chr4_1:73191278-73191297 | Msa0570820:intron | 30.0% | |
GGTATGCTTAGTAGTAAATT+GGG | - | chr4_1:73191440-73191459 | None:intergenic | 30.0% | |
AGGTATGCTTAGTAGTAAAT+TGG | - | chr4_1:73191441-73191460 | None:intergenic | 30.0% | |
GAATAAATTGGACAATAACG+AGG | + | chr4_1:73191623-73191642 | Msa0570820:intron | 30.0% | |
AGGAGACTATTAAACCAAAA+TGG | + | chr4_1:73191651-73191670 | Msa0570820:intron | 30.0% | |
! | AACAATGTTCGTAACCATTT+TGG | - | chr4_1:73191668-73191687 | None:intergenic | 30.0% |
CCATTTCCTAAAAATTAGCA+TGG | - | chr4_1:73191715-73191734 | None:intergenic | 30.0% | |
!! | CCATGCTAATTTTTAGGAAA+TGG | + | chr4_1:73191712-73191731 | Msa0570820:intron | 30.0% |
! | GAGGTTAGTTAGTTACTAAT+AGG | + | chr4_1:73191744-73191763 | Msa0570820:intron | 30.0% |
ATTATGTTGGGAGTAGTATT+GGG | - | chr4_1:73191856-73191875 | None:intergenic | 30.0% | |
TATTATGTTGGGAGTAGTAT+TGG | - | chr4_1:73191857-73191876 | None:intergenic | 30.0% | |
GCACTAACAATCTATTATGT+TGG | - | chr4_1:73191869-73191888 | None:intergenic | 30.0% | |
AATGCATGCTATCACTAATA+TGG | + | chr4_1:73192391-73192410 | Msa0570820:intron | 30.0% | |
!! | ATAATGAAAATGTGTTGGCT+TGG | + | chr4_1:73192435-73192454 | Msa0570820:intron | 30.0% |
!! | TAATGAAAATGTGTTGGCTT+GGG | + | chr4_1:73192436-73192455 | Msa0570820:intron | 30.0% |
! | TGGTTTTTGATAGAACACTA+TGG | - | chr4_1:73192570-73192589 | None:intergenic | 30.0% |
AGAAACTCGAAAAGATTTAG+AGG | - | chr4_1:73192614-73192633 | None:intergenic | 30.0% | |
!!! | ATCTTTTCGAGTTTCTCTAA+TGG | + | chr4_1:73192618-73192637 | Msa0570820:intron | 30.0% |
! | GTTTCTCTAATGGTTTTCTT+AGG | + | chr4_1:73192628-73192647 | Msa0570820:intron | 30.0% |
AAGAAGAGTAGATCAAATGA+AGG | - | chr4_1:73192683-73192702 | None:intergenic | 30.0% | |
TTGATCTACTCTTCTTACAA+CGG | + | chr4_1:73192687-73192706 | Msa0570820:intron | 30.0% | |
GAAAATAGACTTAGATGGTT+TGG | - | chr4_1:73192739-73192758 | None:intergenic | 30.0% | |
TGGTAGAAAATAGACTTAGA+TGG | - | chr4_1:73192744-73192763 | None:intergenic | 30.0% | |
! | TCTACCAACTTTTCTACTAT+AGG | + | chr4_1:73192757-73192776 | Msa0570820:intron | 30.0% |
AAAGTGATGAGATACAGTAA+GGG | - | chr4_1:73193178-73193197 | None:intergenic | 30.0% | |
TAAAGTGATGAGATACAGTA+AGG | - | chr4_1:73193179-73193198 | None:intergenic | 30.0% | |
CATCACTTTATCTTCTTGTT+TGG | + | chr4_1:73193189-73193208 | Msa0570820:intron | 30.0% | |
! | TCACTTTATCTTCTTGTTTG+GGG | + | chr4_1:73193191-73193210 | Msa0570820:intron | 30.0% |
!!! | TCTTGTTTGGGGTAATTTTT+TGG | + | chr4_1:73193202-73193221 | Msa0570820:intron | 30.0% |
!!! | GGGTAATTTTTTGGACTTTA+TGG | + | chr4_1:73193211-73193230 | Msa0570820:intron | 30.0% |
ACTTTATGGTGAAGACATAT+TGG | + | chr4_1:73193225-73193244 | Msa0570820:intron | 30.0% | |
TTGTAGCACTCTATTAACAA+AGG | - | chr4_1:73193293-73193312 | None:intergenic | 30.0% | |
! | CAATGGAAAACATGATTTGT+TGG | + | chr4_1:73193322-73193341 | Msa0570820:CDS | 30.0% |
!! | ATGGAAAACATGATTTGTTG+GGG | + | chr4_1:73193324-73193343 | Msa0570820:CDS | 30.0% |
! | TGTCCCTTAAATCTATTTCT+TGG | + | chr4_1:73193370-73193389 | Msa0570820:intron | 30.0% |
CAGCCAAGAAATAGATTTAA+GGG | - | chr4_1:73193376-73193395 | None:intergenic | 30.0% | |
TCAGCCAAGAAATAGATTTA+AGG | - | chr4_1:73193377-73193396 | None:intergenic | 30.0% | |
! | CTGCAGTTTTCTGATAAAAT+AGG | - | chr4_1:73193422-73193441 | None:intergenic | 30.0% |
ATTAAAAAGCCGACTATTTG+TGG | + | chr4_1:73193619-73193638 | Msa0570820:CDS | 30.0% | |
ATATACTTTCCTGGATTACT+TGG | + | chr4_1:73193664-73193683 | Msa0570820:CDS | 30.0% | |
ATTTGAATTGAACTTCATGG+TGG | + | chr4_1:73193694-73193713 | Msa0570820:CDS | 30.0% | |
ATTAGGTCCAACAAACTTAA+GGG | - | chr4_1:73193747-73193766 | None:intergenic | 30.0% | |
AATTAGGTCCAACAAACTTA+AGG | - | chr4_1:73193748-73193767 | None:intergenic | 30.0% | |
TGTATAATCTGTTCTCATCT+TGG | + | chr4_1:73193843-73193862 | Msa0570820:intron | 30.0% | |
CTCATCATAGCTAATATCTT+TGG | + | chr4_1:73194056-73194075 | Msa0570820:intron | 30.0% | |
TTTCACTAACCTTGCATTAT+AGG | + | chr4_1:73194216-73194235 | Msa0570820:intron | 30.0% | |
CATCCAATTTATTAGTTAGC+TGG | + | chr4_1:73194381-73194400 | Msa0570820:intron | 30.0% | |
GAACCAGCTAACTAATAAAT+TGG | - | chr4_1:73194387-73194406 | None:intergenic | 30.0% | |
TACATTTCAATCTGTCATGA+TGG | + | chr4_1:73194682-73194701 | Msa0570820:intron | 30.0% | |
!!! | AAGGGTGCTATACATTTTAT+TGG | + | chr4_1:73194721-73194740 | Msa0570820:intron | 30.0% |
!! | AGGGTGCTATACATTTTATT+GGG | + | chr4_1:73194722-73194741 | Msa0570820:intron | 30.0% |
TATAATGCAAAGAATCTGGA+AGG | - | chr4_1:73194789-73194808 | None:intergenic | 30.0% | |
TTGCATTATATTGATCCTTC+AGG | + | chr4_1:73194799-73194818 | Msa0570820:CDS | 30.0% | |
ATTATATTGATCCTTCAGGA+CGG | + | chr4_1:73194803-73194822 | Msa0570820:CDS | 30.0% | |
CTTACTCTTTGGTATGAATT+TGG | - | chr4_1:73194829-73194848 | None:intergenic | 30.0% | |
CTAAAAATATCCGTACAACA+TGG | - | chr4_1:73194897-73194916 | None:intergenic | 30.0% | |
! | CATGTTGTACGGATATTTTT+AGG | + | chr4_1:73194895-73194914 | Msa0570820:intron | 30.0% |
! | TTTTAGGCAATTATTGAGGT+TGG | + | chr4_1:73194911-73194930 | Msa0570820:intron | 30.0% |
!! | TCCATTCAAGTTGAAACAAT+GGG | - | chr4_1:73195017-73195036 | None:intergenic | 30.0% |
!! | TTCCATTCAAGTTGAAACAA+TGG | - | chr4_1:73195018-73195037 | None:intergenic | 30.0% |
ATTGCAGCATTATTTATGAC+AGG | - | chr4_1:73195217-73195236 | None:intergenic | 30.0% | |
! | ATTTATCTGTGAGAGTATGT+TGG | + | chr4_1:73195337-73195356 | Msa0570820:intron | 30.0% |
TGGTTATAATTGATGTGGAA+TGG | + | chr4_1:73195357-73195376 | Msa0570820:intron | 30.0% | |
! | TGGAATTGACTCAATCTAAA+TGG | - | chr4_1:73195388-73195407 | None:intergenic | 30.0% |
TTTAGATTGAGTCAATTCCA+TGG | + | chr4_1:73195388-73195407 | Msa0570820:intron | 30.0% | |
ACATAAGAATGTTTATGCCA+TGG | - | chr4_1:73195408-73195427 | None:intergenic | 30.0% | |
AAAATTCATTATATGGAGCC+AGG | - | chr4_1:73195533-73195552 | None:intergenic | 30.0% | |
ATTATAACATAATTGGTGGG+GGG | - | chr4_1:73195766-73195785 | None:intergenic | 30.0% | |
TTGTAATCTAAGCATCTCTT+AGG | - | chr4_1:73195842-73195861 | None:intergenic | 30.0% | |
ATAAATAATTCTTAGGGGAG+GGG | - | chr4_1:73195866-73195885 | None:intergenic | 30.0% | |
!! | GTAGATTTTAACATTAGAGG+GGG | + | chr4_1:73196334-73196353 | Msa0570820:intron | 30.0% |
AATGTAATTTAAGCATCTCC+CGG | + | chr4_1:73196466-73196485 | Msa0570820:intron | 30.0% | |
TATTGTATTTGGATGTAAGG+GGG | - | chr4_1:73196824-73196843 | None:intergenic | 30.0% | |
AAGACAACTACAAATAAGTG+GGG | - | chr4_1:73196952-73196971 | None:intergenic | 30.0% | |
GAAGACAACTACAAATAAGT+GGG | - | chr4_1:73196953-73196972 | None:intergenic | 30.0% | |
TATTTGTAGTTGTCTTCCTT+TGG | + | chr4_1:73196956-73196975 | Msa0570820:intron | 30.0% | |
CTAGTAGTTAACATTACCAA+AGG | - | chr4_1:73196975-73196994 | None:intergenic | 30.0% | |
GTATCTTACATAAAACGCAA+AGG | - | chr4_1:73197071-73197090 | None:intergenic | 30.0% | |
! | ATATCATAAGAAGTGTATGG+AGG | + | chr4_1:73197719-73197738 | Msa0570820:intron | 30.0% |
! | TATCATAAGAAGTGTATGGA+GGG | + | chr4_1:73197720-73197739 | Msa0570820:intron | 30.0% |
GTTATTCAATATACTGCATG+GGG | + | chr4_1:73197798-73197817 | Msa0570820:intron | 30.0% | |
TTGTATGCATTGTTCTAACA+TGG | - | chr4_1:73197887-73197906 | None:intergenic | 30.0% | |
!!! | CAATTTTTTTGGAAGTTCTC+AGG | - | chr4_1:73197954-73197973 | None:intergenic | 30.0% |
!!! | GCAAGATGATGCAATTTTTT+TGG | - | chr4_1:73197965-73197984 | None:intergenic | 30.0% |
! | TAGTACAGTTTGTTCCATTT+CGG | + | chr4_1:73198342-73198361 | Msa0570820:CDS | 30.0% |
! | TGAAGTCATAATTTGCAATC+TGG | - | chr4_1:73198386-73198405 | None:intergenic | 30.0% |
ACAAGAGATTGATAAGTTCA+AGG | - | chr4_1:73198417-73198436 | None:intergenic | 30.0% | |
!!! | CTCAATTTTTAGCGTATATG+CGG | + | chr4_1:73198501-73198520 | Msa0570820:CDS | 30.0% |
TCTTTACATGACTAGAGATT+TGG | - | chr4_1:73198542-73198561 | None:intergenic | 30.0% | |
TTGCACATTGATCAATGAAT+AGG | - | chr4_1:73198584-73198603 | None:intergenic | 30.0% | |
TTGTGCTAAATGCCAATTAA+TGG | + | chr4_1:73198675-73198694 | Msa0570820:three_prime_UTR | 30.0% | |
AAAATAAAACTCCAACCAGA+AGG | - | chr4_1:73198754-73198773 | None:intergenic | 30.0% | |
! | ATTCTATTTTCTTGTAGCTG+AGG | + | chr4_1:73198841-73198860 | Msa0570820:three_prime_UTR | 30.0% |
! | TTCTATTTTCTTGTAGCTGA+GGG | + | chr4_1:73198842-73198861 | Msa0570820:three_prime_UTR | 30.0% |
TTCAGTTATATTGGATTTCC+AGG | - | chr4_1:73198901-73198920 | None:intergenic | 30.0% | |
AGACTTGAAGAAGTTATCGA+CGG | - | chr4_1:73187479-73187498 | None:intergenic | 35.0% | |
AATACCACGAAGTAGTACTT+AGG | - | chr4_1:73187866-73187885 | None:intergenic | 35.0% | |
! | GAAGTGTTCCTTGAGTAATA+AGG | + | chr4_1:73187946-73187965 | Msa0570820:intron | 35.0% |
!! | TTGGATAGCCTTATTACTCA+AGG | - | chr4_1:73187957-73187976 | None:intergenic | 35.0% |
TTGTCAAATAGCGGCTATAT+TGG | + | chr4_1:73188166-73188185 | Msa0570820:intron | 35.0% | |
TGCGAAATTTGAACATTCTG+CGG | + | chr4_1:73188270-73188289 | Msa0570820:intron | 35.0% | |
AATGATAGATAACTCCAGAG+AGG | + | chr4_1:73188591-73188610 | Msa0570820:intron | 35.0% | |
ATGATAGATAACTCCAGAGA+GGG | + | chr4_1:73188592-73188611 | Msa0570820:intron | 35.0% | |
! | GTTTTTACCACCTTAAAGGT+AGG | + | chr4_1:73188651-73188670 | Msa0570820:intron | 35.0% |
CCGGATCCAATTCATTAATT+TGG | + | chr4_1:73188678-73188697 | Msa0570820:intron | 35.0% | |
TTCCACGCAAGAAGAAAATA+TGG | + | chr4_1:73188801-73188820 | Msa0570820:intron | 35.0% | |
! | AACCATATTTTCTTCTTGCG+TGG | - | chr4_1:73188806-73188825 | None:intergenic | 35.0% |
GCAAGAAGAAAATATGGTTG+TGG | + | chr4_1:73188807-73188826 | Msa0570820:intron | 35.0% | |
!! | ATGTTTTTGCATGTCGGTTA+CGG | + | chr4_1:73189720-73189739 | Msa0570820:intron | 35.0% |
GAGTCTCTTGGGAAAAATAA+TGG | - | chr4_1:73189748-73189767 | None:intergenic | 35.0% | |
GTGAAATGTAAGAGTCTCTT+GGG | - | chr4_1:73189759-73189778 | None:intergenic | 35.0% | |
TATCTATCAAACAAGCGACA+AGG | - | chr4_1:73190159-73190178 | None:intergenic | 35.0% | |
AGAACAACAATTTCTTGGTG+AGG | + | chr4_1:73190267-73190286 | Msa0570820:CDS | 35.0% | |
TCTAATATCAGGTGCCAAAA+AGG | - | chr4_1:73190332-73190351 | None:intergenic | 35.0% | |
! | GGACAAATTGTTGTTGTTGA+TGG | - | chr4_1:73190589-73190608 | None:intergenic | 35.0% |
! | TTTTTGTGAGTTACCAGATC+TGG | - | chr4_1:73190674-73190693 | None:intergenic | 35.0% |
TCTGGTAACTCACAAAAATG+TGG | + | chr4_1:73190676-73190695 | Msa0570820:CDS | 35.0% | |
CTGGTAACTCACAAAAATGT+GGG | + | chr4_1:73190677-73190696 | Msa0570820:CDS | 35.0% | |
! | GGTGTACAGATTTGGAATAT+AGG | + | chr4_1:73190761-73190780 | Msa0570820:CDS | 35.0% |
! | GCTGTTATTAAGCCTTATGA+AGG | + | chr4_1:73190824-73190843 | Msa0570820:intron | 35.0% |
!! | TGTGCTTTTGTTTGTCTTGA+AGG | + | chr4_1:73190868-73190887 | Msa0570820:intron | 35.0% |
AGAATGATCACAATCCAACA+TGG | + | chr4_1:73190963-73190982 | Msa0570820:CDS | 35.0% | |
AAAAACACTTGCTTCCATGT+TGG | - | chr4_1:73190980-73190999 | None:intergenic | 35.0% | |
AAACTTGAATTTGACTCCTC+CGG | + | chr4_1:73191030-73191049 | Msa0570820:intron | 35.0% | |
AGTTCTTTCTCTCTCAGATT+TGG | - | chr4_1:73191497-73191516 | None:intergenic | 35.0% | |
CATTGTTAACAGATAGACAG+AGG | + | chr4_1:73191681-73191700 | Msa0570820:intron | 35.0% | |
ATGTACACTTGTACCATTGA+GGG | - | chr4_1:73192048-73192067 | None:intergenic | 35.0% | |
TATGTACACTTGTACCATTG+AGG | - | chr4_1:73192049-73192068 | None:intergenic | 35.0% | |
TAAAGACCACTTTGTCATAG+AGG | + | chr4_1:73192276-73192295 | Msa0570820:intron | 35.0% | |
AACTAAGCTATTAGGAGAGT+TGG | - | chr4_1:73192311-73192330 | None:intergenic | 35.0% | |
CTCAAGCTAACTAAGCTATT+AGG | - | chr4_1:73192319-73192338 | None:intergenic | 35.0% | |
! | CTAATAGCTTAGTTAGCTTG+AGG | + | chr4_1:73192317-73192336 | Msa0570820:intron | 35.0% |
!! | AGTTAGCTTGAGGTTTTTAC+TGG | + | chr4_1:73192327-73192346 | Msa0570820:intron | 35.0% |
! | TTGGTTGTTGTTGTTGTTGT+TGG | - | chr4_1:73192503-73192522 | None:intergenic | 35.0% |
! | CAATGAGTTGGATCCAAATA+TGG | - | chr4_1:73192590-73192609 | None:intergenic | 35.0% |
AGATTTAGAGGTCAATGAGT+TGG | - | chr4_1:73192602-73192621 | None:intergenic | 35.0% | |
AGCACCTATAGTAGAAAAGT+TGG | - | chr4_1:73192764-73192783 | None:intergenic | 35.0% | |
GAACCTTACTGTTACAATGA+GGG | + | chr4_1:73193115-73193134 | Msa0570820:intron | 35.0% | |
AAGGGAAAACTCCATAGTTA+GGG | - | chr4_1:73193160-73193179 | None:intergenic | 35.0% | |
TAAGGGAAAACTCCATAGTT+AGG | - | chr4_1:73193161-73193180 | None:intergenic | 35.0% | |
TGCTACAACTTCAATAGCAA+TGG | + | chr4_1:73193305-73193324 | Msa0570820:CDS | 35.0% | |
GGGATTTGAATTGAACTTCA+TGG | + | chr4_1:73193691-73193710 | Msa0570820:CDS | 35.0% | |
! | TGGAGTACCTGTAAAATCAA+TGG | - | chr4_1:73193720-73193739 | None:intergenic | 35.0% |
! | CCAACAAACTTAAGGGTATA+TGG | - | chr4_1:73193740-73193759 | None:intergenic | 35.0% |
CCATATACCCTTAAGTTTGT+TGG | + | chr4_1:73193737-73193756 | Msa0570820:intron | 35.0% | |
!! | TCTTTGGCTTTGTTATCTCT+TGG | + | chr4_1:73194072-73194091 | Msa0570820:intron | 35.0% |
TTTGGAAATATGGCACTAAC+AGG | + | chr4_1:73194130-73194149 | Msa0570820:intron | 35.0% | |
ATGGTAGGACTATGATGTAA+CGG | + | chr4_1:73194265-73194284 | Msa0570820:intron | 35.0% | |
! | TTTTGTCCAGTCTACCTTAA+GGG | + | chr4_1:73194502-73194521 | Msa0570820:intron | 35.0% |
CTGTCATGATGGTTATCTAT+TGG | + | chr4_1:73194693-73194712 | Msa0570820:intron | 35.0% | |
TGGTTATCTATTGGATGACA+AGG | + | chr4_1:73194702-73194721 | Msa0570820:intron | 35.0% | |
GGTTATCTATTGGATGACAA+GGG | + | chr4_1:73194703-73194722 | Msa0570820:intron | 35.0% | |
! | TGTTGTTTACCAGCTTCAAA+TGG | + | chr4_1:73194754-73194773 | Msa0570820:intron | 35.0% |
TGTTACTGATCCATGTTGTA+CGG | + | chr4_1:73194884-73194903 | Msa0570820:intron | 35.0% | |
TCCCATTGTTTCAACTTGAA+TGG | + | chr4_1:73195013-73195032 | Msa0570820:CDS | 35.0% | |
!! | TACATGTTTCTGTCTTTTGC+AGG | + | chr4_1:73195111-73195130 | Msa0570820:intron | 35.0% |
! | CTTTGTCCTGTTGATTATCA+CGG | + | chr4_1:73195276-73195295 | Msa0570820:CDS | 35.0% |
TACTTACCGTGATAATCAAC+AGG | - | chr4_1:73195285-73195304 | None:intergenic | 35.0% | |
GCTTATTCGCAAGAAAAACA+TGG | + | chr4_1:73195433-73195452 | Msa0570820:intron | 35.0% | |
TTCGCAAGAAAAACATGGAA+AGG | + | chr4_1:73195438-73195457 | Msa0570820:intron | 35.0% | |
TTATAACATAATTGGTGGGG+GGG | - | chr4_1:73195765-73195784 | None:intergenic | 35.0% | |
!! | ATTTTAACATTAGAGGGGGA+GGG | + | chr4_1:73196338-73196357 | Msa0570820:intron | 35.0% |
ATTCAATCTTCTTTCAAGGG+AGG | + | chr4_1:73196368-73196387 | Msa0570820:intron | 35.0% | |
TTCAATCTTCTTTCAAGGGA+GGG | + | chr4_1:73196369-73196388 | Msa0570820:intron | 35.0% | |
ATGTAATTTAAGCATCTCCC+GGG | + | chr4_1:73196467-73196486 | Msa0570820:intron | 35.0% | |
CATTTCCCTTTATTGCCATA+CGG | + | chr4_1:73196695-73196714 | Msa0570820:intron | 35.0% | |
TAACTAAAAGGACCAATGAG+AGG | + | chr4_1:73196771-73196790 | Msa0570820:intron | 35.0% | |
AACTTAGTTGAAGTCATCCT+AGG | - | chr4_1:73196857-73196876 | None:intergenic | 35.0% | |
AAGGTTAGGTCAACAGTTTA+AGG | - | chr4_1:73196888-73196907 | None:intergenic | 35.0% | |
TGGAAAAGCAACTAAAGGTT+AGG | - | chr4_1:73196902-73196921 | None:intergenic | 35.0% | |
CACATTGGAAAAGCAACTAA+AGG | - | chr4_1:73196907-73196926 | None:intergenic | 35.0% | |
!!! | CTTTAGTTGCTTTTCCAATG+TGG | + | chr4_1:73196905-73196924 | Msa0570820:intron | 35.0% |
GGAATAAAATGCAACCACAT+TGG | - | chr4_1:73196922-73196941 | None:intergenic | 35.0% | |
GGAAGACAACTACAAATAAG+TGG | - | chr4_1:73196954-73196973 | None:intergenic | 35.0% | |
TACTATGGGAATGAAGATCA+GGG | - | chr4_1:73197123-73197142 | None:intergenic | 35.0% | |
TTACTATGGGAATGAAGATC+AGG | - | chr4_1:73197124-73197143 | None:intergenic | 35.0% | |
ACTCTATGTTTCATTCGAAG+TGG | + | chr4_1:73197414-73197433 | Msa0570820:intron | 35.0% | |
TATGTTTCATTCGAAGTGGA+AGG | + | chr4_1:73197418-73197437 | Msa0570820:intron | 35.0% | |
! | TATACTGCATGGGGAATTTT+TGG | + | chr4_1:73197807-73197826 | Msa0570820:intron | 35.0% |
TTACATGGGAATGACAACTA+TGG | + | chr4_1:73197850-73197869 | Msa0570820:intron | 35.0% | |
TGTCTAATTGGTATCCTACT+AGG | + | chr4_1:73198006-73198025 | Msa0570820:intron | 35.0% | |
TAATTGGTATCCTACTAGGA+TGG | + | chr4_1:73198010-73198029 | Msa0570820:intron | 35.0% | |
!! | CAAGTGCATCTTTTGTTTCT+TGG | - | chr4_1:73198051-73198070 | None:intergenic | 35.0% |
! | AGATGCACTTGTTAAAGCAT+CGG | + | chr4_1:73198060-73198079 | Msa0570820:CDS | 35.0% |
!! | CGATAAGGATTGATAATGGT+AGG | - | chr4_1:73198087-73198106 | None:intergenic | 35.0% |
CCAACGATAAGGATTGATAA+TGG | - | chr4_1:73198091-73198110 | None:intergenic | 35.0% | |
CCATTATCAATCCTTATCGT+TGG | + | chr4_1:73198088-73198107 | Msa0570820:CDS | 35.0% | |
TATGTAATGTCATCACCTCA+GGG | + | chr4_1:73198225-73198244 | Msa0570820:intron | 35.0% | |
AAAAAACTACATAAGCCCTG+AGG | - | chr4_1:73198243-73198262 | None:intergenic | 35.0% | |
! | AGTACAGTTTGTTCCATTTC+GGG | + | chr4_1:73198343-73198362 | Msa0570820:CDS | 35.0% |
TGTAAACTTCTTCCTATTGC+AGG | + | chr4_1:73198434-73198453 | Msa0570820:intron | 35.0% | |
! | TACATGACTAGAGATTTGGT+TGG | - | chr4_1:73198538-73198557 | None:intergenic | 35.0% |
TTGATCAATGTGCAAGTTCA+AGG | + | chr4_1:73198589-73198608 | Msa0570820:three_prime_UTR | 35.0% | |
AAATCGATAAATTCGGCCAA+AGG | + | chr4_1:73198636-73198655 | Msa0570820:three_prime_UTR | 35.0% | |
AATCGATAAATTCGGCCAAA+GGG | + | chr4_1:73198637-73198656 | Msa0570820:three_prime_UTR | 35.0% | |
ACCTCTCTTGAACCATTAAT+TGG | - | chr4_1:73198690-73198709 | None:intergenic | 35.0% | |
!!! | TTTGGTTTTTCTGGGTAGTT+AGG | + | chr4_1:73198789-73198808 | Msa0570820:three_prime_UTR | 35.0% |
! | TCTATTTTCTTGTAGCTGAG+GGG | + | chr4_1:73198843-73198862 | Msa0570820:three_prime_UTR | 35.0% |
GATAACTTCTTCAAGTCTCG+TGG | + | chr4_1:73187481-73187500 | Msa0570820:CDS | 40.0% | |
GGTTTGTATTGTAGCGTAGA+TGG | - | chr4_1:73187552-73187571 | None:intergenic | 40.0% | |
AACTCCTAAGTACTACTTCG+TGG | + | chr4_1:73187859-73187878 | Msa0570820:intron | 40.0% | |
! | AGATATGTTGAGGGGGTATA+AGG | + | chr4_1:73187982-73188001 | Msa0570820:intron | 40.0% |
TAGCCGCTATTTGACAATAC+TGG | - | chr4_1:73188163-73188182 | None:intergenic | 40.0% | |
AAATGGCAACTATACCACTG+TGG | + | chr4_1:73188244-73188263 | Msa0570820:intron | 40.0% | |
TTCTTCTTGCGTGGAAGAAA+GGG | - | chr4_1:73188797-73188816 | None:intergenic | 40.0% | |
TTTCTTCTTGCGTGGAAGAA+AGG | - | chr4_1:73188798-73188817 | None:intergenic | 40.0% | |
!! | TGACTTGCTACGATGATGTA+AGG | - | chr4_1:73188838-73188857 | None:intergenic | 40.0% |
AGTTCAGCAAACACAACAGA+TGG | + | chr4_1:73188890-73188909 | Msa0570820:intron | 40.0% | |
CAAACACAACAGATGGATCA+GGG | + | chr4_1:73188897-73188916 | Msa0570820:intron | 40.0% | |
AAACACAACAGATGGATCAG+GGG | + | chr4_1:73188898-73188917 | Msa0570820:intron | 40.0% | |
GCTGTAGAGTGATCCAATAA+TGG | + | chr4_1:73189043-73189062 | Msa0570820:intron | 40.0% | |
! | AGGAAAAAATGGAGCACTTG+AGG | + | chr4_1:73189079-73189098 | Msa0570820:CDS | 40.0% |
!!! | AAGCGTTTTGTTGTTTCACC+AGG | + | chr4_1:73189238-73189257 | Msa0570820:intron | 40.0% |
TCTCAGAAACAGTACGTAGT+AGG | - | chr4_1:73189411-73189430 | None:intergenic | 40.0% | |
GGTGAAATGTAAGAGTCTCT+TGG | - | chr4_1:73189760-73189779 | None:intergenic | 40.0% | |
TGTGCAGAATCTGAACCATT+AGG | - | chr4_1:73190064-73190083 | None:intergenic | 40.0% | |
TTCTGCACAATCTTCTCGTA+AGG | + | chr4_1:73190075-73190094 | Msa0570820:intron | 40.0% | |
! | TTAGAGACGGTTCACCTTTT+TGG | + | chr4_1:73190315-73190334 | Msa0570820:intron | 40.0% |
CGCTTTGTAATTATCTGCAC+AGG | - | chr4_1:73190610-73190629 | None:intergenic | 40.0% | |
AGACAAGATTCTACCAGATC+TGG | + | chr4_1:73190658-73190677 | Msa0570820:CDS | 40.0% | |
CTACAGTAGAGATGATACTC+AGG | + | chr4_1:73190740-73190759 | Msa0570820:CDS | 40.0% | |
GATACTCAGGTGTACAGATT+TGG | + | chr4_1:73190753-73190772 | Msa0570820:CDS | 40.0% | |
TGTTCAACAAGTAGGAAGCA+AGG | + | chr4_1:73191003-73191022 | Msa0570820:CDS | 40.0% | |
! | TTGCACATTTTACTATCCGG+AGG | - | chr4_1:73191049-73191068 | None:intergenic | 40.0% |
CTAAGCATACCTAGAGTTGA+TGG | + | chr4_1:73191449-73191468 | Msa0570820:intron | 40.0% | |
!! | TAGAGTTGATGGCCTAGAAA+CGG | + | chr4_1:73191460-73191479 | Msa0570820:intron | 40.0% |
GCCTAGAAACGGTATAAAGT+TGG | + | chr4_1:73191471-73191490 | Msa0570820:intron | 40.0% | |
GCCAACTTTATACCGTTTCT+AGG | - | chr4_1:73191475-73191494 | None:intergenic | 40.0% | |
CTTAGCATAACTTTCACGCT+TGG | - | chr4_1:73191521-73191540 | None:intergenic | 40.0% | |
CTCTAGATCAGATGCTACTA+TGG | - | chr4_1:73191544-73191563 | None:intergenic | 40.0% | |
AGAGACGAAGAACATTTAGC+TGG | + | chr4_1:73191575-73191594 | Msa0570820:intron | 40.0% | |
GAGACGAAGAACATTTAGCT+GGG | + | chr4_1:73191576-73191595 | Msa0570820:intron | 40.0% | |
TGGACAATAACGAGGAAACA+AGG | + | chr4_1:73191631-73191650 | Msa0570820:intron | 40.0% | |
TTATGGCTCTTCACTTCGTT+AGG | - | chr4_1:73192001-73192020 | None:intergenic | 40.0% | |
CAAGATCCCATAGTCTCAAA+GGG | + | chr4_1:73192176-73192195 | Msa0570820:intron | 40.0% | |
TCAAAGCCTCTATGACAAAG+TGG | - | chr4_1:73192285-73192304 | None:intergenic | 40.0% | |
AGTCAGGTTAAAAGAGGTAG+AGG | - | chr4_1:73192658-73192677 | None:intergenic | 40.0% | |
AAGGAGAGTCAGGTTAAAAG+AGG | - | chr4_1:73192664-73192683 | None:intergenic | 40.0% | |
AGATCAAATGAAGGAGAGTC+AGG | - | chr4_1:73192674-73192693 | None:intergenic | 40.0% | |
TCTTCTTACAACGGCATCTA+CGG | + | chr4_1:73192696-73192715 | Msa0570820:intron | 40.0% | |
ACACCATTAGAGAGAAAGTG+GGG | - | chr4_1:73192789-73192808 | None:intergenic | 40.0% | |
GACACCATTAGAGAGAAAGT+GGG | - | chr4_1:73192790-73192809 | None:intergenic | 40.0% | |
TGACACCATTAGAGAGAAAG+TGG | - | chr4_1:73192791-73192810 | None:intergenic | 40.0% | |
AGACTAGACAGGATAGGATT+AGG | - | chr4_1:73192816-73192835 | None:intergenic | 40.0% | |
ACTAGCCCACCGAAATAAAT+TGG | - | chr4_1:73192950-73192969 | None:intergenic | 40.0% | |
!! | TTTATTTCGGTGGGCTAGTT+TGG | + | chr4_1:73192951-73192970 | Msa0570820:intron | 40.0% |
!!! | ATGCGCATCTTGTTTTCATG+AGG | + | chr4_1:73193026-73193045 | Msa0570820:intron | 40.0% |
!!! | TGCGCATCTTGTTTTCATGA+GGG | + | chr4_1:73193027-73193046 | Msa0570820:intron | 40.0% |
AGAAATAAGATCCCCTCACA+TGG | - | chr4_1:73193073-73193092 | None:intergenic | 40.0% | |
!! | GGGGATCTTATTTCTATGAG+CGG | + | chr4_1:73193078-73193097 | Msa0570820:intron | 40.0% |
GGAACCTTACTGTTACAATG+AGG | + | chr4_1:73193114-73193133 | Msa0570820:intron | 40.0% | |
AGACCCTCATTGTAACAGTA+AGG | - | chr4_1:73193121-73193140 | None:intergenic | 40.0% | |
TAAGGGACAAAAGGACAAAC+AGG | - | chr4_1:73193359-73193378 | None:intergenic | 40.0% | |
!!! | TTTATTTTTGTCTCCTGCCG+TGG | + | chr4_1:73193492-73193511 | Msa0570820:CDS | 40.0% |
!!! | TTATTTTTGTCTCCTGCCGT+GGG | + | chr4_1:73193493-73193512 | Msa0570820:CDS | 40.0% |
!!! | ATGGTGGCCATTGATTTTAC+AGG | + | chr4_1:73193710-73193729 | Msa0570820:CDS | 40.0% |
CTGGAAACTACACACTAGAA+AGG | - | chr4_1:73194448-73194467 | None:intergenic | 40.0% | |
! | GTTTTGTCCAGTCTACCTTA+AGG | + | chr4_1:73194501-73194520 | Msa0570820:intron | 40.0% |
!! | TACCTTAAGGGAGCATTTGT+GGG | + | chr4_1:73194514-73194533 | Msa0570820:intron | 40.0% |
CATTTCATAATCCGGAGAGT+GGG | - | chr4_1:73194624-73194643 | None:intergenic | 40.0% | |
TCATTTCATAATCCGGAGAG+TGG | - | chr4_1:73194625-73194644 | None:intergenic | 40.0% | |
TGAAGCTGGTAAACAACACA+AGG | - | chr4_1:73194752-73194771 | None:intergenic | 40.0% | |
AAGTTGAAACAATGGGAGAC+AGG | - | chr4_1:73195010-73195029 | None:intergenic | 40.0% | |
TGGAAGCAATACTTACTGTG+AGG | + | chr4_1:73195033-73195052 | Msa0570820:CDS | 40.0% | |
! | TTCTGTCTTTTGCAGGTAGA+AGG | + | chr4_1:73195118-73195137 | Msa0570820:intron | 40.0% |
AGGCATTCAAGGAATCATGA+TGG | + | chr4_1:73195138-73195157 | Msa0570820:CDS | 40.0% | |
! | ATGACAGGTCCAAAAAGTGT+TGG | - | chr4_1:73195202-73195221 | None:intergenic | 40.0% |
! | TTCCACCATTTGCTACAGAT+TGG | - | chr4_1:73195249-73195268 | None:intergenic | 40.0% |
!! | AGGGATGATTTCTGGTTCTA+TGG | - | chr4_1:73195484-73195503 | None:intergenic | 40.0% |
TGTAATCCAAGCTTCTCATG+GGG | - | chr4_1:73195731-73195750 | None:intergenic | 40.0% | |
GTGTAATCCAAGCTTCTCAT+GGG | - | chr4_1:73195732-73195751 | None:intergenic | 40.0% | |
AGTGTAATCCAAGCTTCTCA+TGG | - | chr4_1:73195733-73195752 | None:intergenic | 40.0% | |
TATAACATAATTGGTGGGGG+GGG | - | chr4_1:73195764-73195783 | None:intergenic | 40.0% | |
TCTAAGCATCTCTTAGGAGA+GGG | - | chr4_1:73195836-73195855 | None:intergenic | 40.0% | |
ATCTAAGCATCTCTTAGGAG+AGG | - | chr4_1:73195837-73195856 | None:intergenic | 40.0% | |
!! | GATTTTAACATTAGAGGGGG+AGG | + | chr4_1:73196337-73196356 | Msa0570820:intron | 40.0% |
! | TTTTAACATTAGAGGGGGAG+GGG | + | chr4_1:73196339-73196358 | Msa0570820:intron | 40.0% |
TCAATCTTCTTTCAAGGGAG+GGG | + | chr4_1:73196370-73196389 | Msa0570820:intron | 40.0% | |
!!! | TATTTTTTGCATGAGAGGGG+AGG | + | chr4_1:73196411-73196430 | Msa0570820:intron | 40.0% |
!!! | ATTTTTTGCATGAGAGGGGA+GGG | + | chr4_1:73196412-73196431 | Msa0570820:intron | 40.0% |
TGTAATTTAAGCATCTCCCG+GGG | + | chr4_1:73196468-73196487 | Msa0570820:intron | 40.0% | |
TATTCCTGGCAAACTACTAC+AGG | - | chr4_1:73196559-73196578 | None:intergenic | 40.0% | |
CGTATGGCAATAAAGGGAAA+TGG | - | chr4_1:73196697-73196716 | None:intergenic | 40.0% | |
GTGAACCGTATGGCAATAAA+GGG | - | chr4_1:73196703-73196722 | None:intergenic | 40.0% | |
AGTGAACCGTATGGCAATAA+AGG | - | chr4_1:73196704-73196723 | None:intergenic | 40.0% | |
ACAAATAAGTGGGGAGATGA+AGG | - | chr4_1:73196943-73196962 | None:intergenic | 40.0% | |
GTTGAACGCAATAAAGCTCT+TGG | + | chr4_1:73197022-73197041 | Msa0570820:intron | 40.0% | |
! | TCTGTAGAGTTGCTATTCAG+TGG | + | chr4_1:73197092-73197111 | Msa0570820:intron | 40.0% |
CTGAATGGAAATTCGGAAGA+TGG | + | chr4_1:73197149-73197168 | Msa0570820:intron | 40.0% | |
! | ACAGTTTGAGTCTAGAGCTA+GGG | + | chr4_1:73197351-73197370 | Msa0570820:intron | 40.0% |
!! | TTTTGGAAGTTCTCAGGAGT+TGG | - | chr4_1:73197948-73197967 | None:intergenic | 40.0% |
!! | TCCTAGTGCTGATGTCTAAT+TGG | + | chr4_1:73197994-73198013 | Msa0570820:intron | 40.0% |
ACCAATTAGACATCAGCACT+AGG | - | chr4_1:73197998-73198017 | None:intergenic | 40.0% | |
! | AGGAGCTGATTTCAAAGAGA+TGG | + | chr4_1:73198117-73198136 | Msa0570820:CDS | 40.0% |
! | AGCTGATTTCAAAGAGATGG+AGG | + | chr4_1:73198120-73198139 | Msa0570820:CDS | 40.0% |
!! | AGTTATAATTGGTTGGCCTG+AGG | + | chr4_1:73198182-73198201 | Msa0570820:intron | 40.0% |
GTATGTAATGTCATCACCTC+AGG | + | chr4_1:73198224-73198243 | Msa0570820:intron | 40.0% | |
TTGTTCAATGTCGCAGATCT+TGG | + | chr4_1:73198262-73198281 | Msa0570820:intron | 40.0% | |
GATAGGCTTGAAAGTTCATC+TGG | + | chr4_1:73198299-73198318 | Msa0570820:CDS | 40.0% | |
CTACTTTGAACATCCCGAAA+TGG | - | chr4_1:73198359-73198378 | None:intergenic | 40.0% | |
CATTTCGGGATGTTCAAAGT+AGG | + | chr4_1:73198357-73198376 | Msa0570820:intron | 40.0% | |
AAACTTCTTCCTATTGCAGG+TGG | + | chr4_1:73198437-73198456 | Msa0570820:intron | 40.0% | |
GAAATTTCACCACCTGCAAT+AGG | - | chr4_1:73198449-73198468 | None:intergenic | 40.0% | |
GCCAATTAATGGTTCAAGAG+AGG | + | chr4_1:73198686-73198705 | Msa0570820:three_prime_UTR | 40.0% | |
! | CTATCAGCTGCTTTATCTTC+AGG | + | chr4_1:73198714-73198733 | Msa0570820:three_prime_UTR | 40.0% |
! | CTATTTTCTTGTAGCTGAGG+GGG | + | chr4_1:73198844-73198863 | Msa0570820:three_prime_UTR | 40.0% |
! | ACCGACTCATTTCAACGCTA+TGG | + | chr4_1:73187363-73187382 | Msa0570820:exon | 45.0% |
! | CCCATAGCGTTGAAATGAGT+CGG | - | chr4_1:73187367-73187386 | None:intergenic | 45.0% |
CCGACTCATTTCAACGCTAT+GGG | + | chr4_1:73187364-73187383 | Msa0570820:exon | 45.0% | |
!!! | CAGTTGTCGTTTTCTGCTTC+TGG | + | chr4_1:73187617-73187636 | Msa0570820:intron | 45.0% |
TGATCGAGATGTGCTCTCTA+AGG | + | chr4_1:73187646-73187665 | Msa0570820:CDS | 45.0% | |
CAAATTTCGCAACACCACAG+TGG | - | chr4_1:73188261-73188280 | None:intergenic | 45.0% | |
TTAGAGAAGTTTAGCCTGCG+AGG | + | chr4_1:73188423-73188442 | Msa0570820:intron | 45.0% | |
TCTTCTTGCGTGGAAGAAAG+GGG | - | chr4_1:73188796-73188815 | None:intergenic | 45.0% | |
GCAAACACAACAGATGGATC+AGG | + | chr4_1:73188896-73188915 | Msa0570820:intron | 45.0% | |
! | AATGGAGCACTTGAGGAACT+TGG | + | chr4_1:73189086-73189105 | Msa0570820:CDS | 45.0% |
TGAATTCGTTGAGTCCGACA+TGG | + | chr4_1:73189126-73189145 | Msa0570820:CDS | 45.0% | |
GTTTCACAACACAGACGTGA+AGG | + | chr4_1:73189317-73189336 | Msa0570820:CDS | 45.0% | |
GGCAACTTGTGCATTATCTG+AGG | + | chr4_1:73190288-73190307 | Msa0570820:CDS | 45.0% | |
GAAGCTCAAAGTGTATGCTG+AGG | + | chr4_1:73190699-73190718 | Msa0570820:CDS | 45.0% | |
GTGTATGCTGAGGAATGTGT+TGG | + | chr4_1:73190709-73190728 | Msa0570820:CDS | 45.0% | |
GGAGTATGGAAGAGAGAAGA+GGG | + | chr4_1:73191292-73191311 | Msa0570820:intron | 45.0% | |
! | GTTTCTAGGCCATCAACTCT+AGG | - | chr4_1:73191461-73191480 | None:intergenic | 45.0% |
CGAAGAACATTTAGCTGGGA+AGG | + | chr4_1:73191580-73191599 | Msa0570820:intron | 45.0% | |
TAGGAAATGGGTGAGAAGAG+AGG | + | chr4_1:73191725-73191744 | Msa0570820:intron | 45.0% | |
! | GGAGTAGTATTGGGTTGTAG+TGG | - | chr4_1:73191847-73191866 | None:intergenic | 45.0% |
TGGGATCTTGCACAAAGACA+AGG | - | chr4_1:73192166-73192185 | None:intergenic | 45.0% | |
GCAAGATCCCATAGTCTCAA+AGG | + | chr4_1:73192175-73192194 | Msa0570820:intron | 45.0% | |
!! | TGTCCACCCTTTGAGACTAT+GGG | - | chr4_1:73192185-73192204 | None:intergenic | 45.0% |
!! | AATGTGTTGGCTTGGGACTT+TGG | + | chr4_1:73192443-73192462 | Msa0570820:intron | 45.0% |
ATCAAACCTGAGACCTTGAG+AGG | - | chr4_1:73192477-73192496 | None:intergenic | 45.0% | |
! | CAAGCCTTATCCCACTAAGT+GGG | + | chr4_1:73192520-73192539 | Msa0570820:intron | 45.0% |
! | AAGCCTTATCCCACTAAGTG+GGG | + | chr4_1:73192521-73192540 | Msa0570820:intron | 45.0% |
CTTCTTACAACGGCATCTAC+GGG | + | chr4_1:73192697-73192716 | Msa0570820:intron | 45.0% | |
TACCCCCACTTTCTCTCTAA+TGG | + | chr4_1:73192783-73192802 | Msa0570820:intron | 45.0% | |
CACCATTAGAGAGAAAGTGG+GGG | - | chr4_1:73192788-73192807 | None:intergenic | 45.0% | |
GTGGTAAGACTAGACAGGAT+AGG | - | chr4_1:73192822-73192841 | None:intergenic | 45.0% | |
GATGAGTGGTAAGACTAGAC+AGG | - | chr4_1:73192827-73192846 | None:intergenic | 45.0% | |
CGAGAGTAAAGTAAGCGTAG+CGG | - | chr4_1:73192869-73192888 | None:intergenic | 45.0% | |
CGCTTACTTTACTCTCGTGT+TGG | + | chr4_1:73192872-73192891 | Msa0570820:intron | 45.0% | |
! | GTTGTATGGTACGGAGTGTT+GGG | - | chr4_1:73192908-73192927 | None:intergenic | 45.0% |
TGTTGTATGGTACGGAGTGT+TGG | - | chr4_1:73192909-73192928 | None:intergenic | 45.0% | |
TCCGTACCATACAACATTGC+CGG | + | chr4_1:73192913-73192932 | Msa0570820:intron | 45.0% | |
ACCGGCAATGTTGTATGGTA+CGG | - | chr4_1:73192917-73192936 | None:intergenic | 45.0% | |
! | TCCCCGGTGCCAATTTATTT+CGG | + | chr4_1:73192938-73192957 | Msa0570820:intron | 45.0% |
ACCGAAATAAATTGGCACCG+GGG | - | chr4_1:73192942-73192961 | None:intergenic | 45.0% | |
CACCGAAATAAATTGGCACC+GGG | - | chr4_1:73192943-73192962 | None:intergenic | 45.0% | |
CCACCGAAATAAATTGGCAC+CGG | - | chr4_1:73192944-73192963 | None:intergenic | 45.0% | |
! | CGGTGCCAATTTATTTCGGT+GGG | + | chr4_1:73192942-73192961 | Msa0570820:intron | 45.0% |
!! | CTTTCAGTGGACTGTTGTCA+TGG | - | chr4_1:73193005-73193024 | None:intergenic | 45.0% |
!!! | GCATCTTGTTTTCATGAGGG+TGG | + | chr4_1:73193030-73193049 | Msa0570820:intron | 45.0% |
CAGAAAACTGCAGACATCTC+TGG | + | chr4_1:73193429-73193448 | Msa0570820:intron | 45.0% | |
AAAACTGCAGACATCTCTGG+TGG | + | chr4_1:73193432-73193451 | Msa0570820:CDS | 45.0% | |
ACTTTCCTGGATTACTTGGC+TGG | + | chr4_1:73193668-73193687 | Msa0570820:CDS | 45.0% | |
CTTTCCTGGATTACTTGGCT+GGG | + | chr4_1:73193669-73193688 | Msa0570820:CDS | 45.0% | |
TTTCCTGGATTACTTGGCTG+GGG | + | chr4_1:73193670-73193689 | Msa0570820:CDS | 45.0% | |
AATGCTCCCTTAAGGTAGAC+TGG | - | chr4_1:73194511-73194530 | None:intergenic | 45.0% | |
!! | CTACCTTAAGGGAGCATTTG+TGG | + | chr4_1:73194513-73194532 | Msa0570820:intron | 45.0% |
AACCCACAAATGCTCCCTTA+AGG | - | chr4_1:73194519-73194538 | None:intergenic | 45.0% | |
TCCTCAAAATGCCATTCCTG+AGG | + | chr4_1:73194538-73194557 | Msa0570820:intron | 45.0% | |
CCTCAAAATGCCATTCCTGA+GGG | + | chr4_1:73194539-73194558 | Msa0570820:intron | 45.0% | |
TGGGGAAGTAAGGAAGGATA+AGG | - | chr4_1:73194598-73194617 | None:intergenic | 45.0% | |
! | CGTGAATTGCCATTTGAAGC+TGG | - | chr4_1:73194766-73194785 | None:intergenic | 45.0% |
TATGAATTTGGCCGTCCTGA+AGG | - | chr4_1:73194817-73194836 | None:intergenic | 45.0% | |
GGCAATTATTGAGGTTGGAG+AGG | + | chr4_1:73194916-73194935 | Msa0570820:intron | 45.0% | |
AGACAAGCGATTTCCTACGT+GGG | + | chr4_1:73194958-73194977 | Msa0570820:CDS | 45.0% | |
!! | TTGCAGGTAGAAGGCATTCA+AGG | + | chr4_1:73195127-73195146 | Msa0570820:intron | 45.0% |
CTGCTTAACGTTTCTCTTGC+AGG | + | chr4_1:73195175-73195194 | Msa0570820:CDS | 45.0% | |
! | CTTGCAGGACCAACACTTTT+TGG | + | chr4_1:73195190-73195209 | Msa0570820:CDS | 45.0% |
! | ACCATTTGCTACAGATTGGC+TGG | - | chr4_1:73195245-73195264 | None:intergenic | 45.0% |
AGCCAATCTGTAGCAAATGG+TGG | + | chr4_1:73195244-73195263 | Msa0570820:CDS | 45.0% | |
GTAATCCAAGCTTCTCATGG+GGG | - | chr4_1:73195730-73195749 | None:intergenic | 45.0% | |
ATAACATAATTGGTGGGGGG+GGG | - | chr4_1:73195763-73195782 | None:intergenic | 45.0% | |
CTAAGCATCTCTTAGGAGAG+GGG | - | chr4_1:73195835-73195854 | None:intergenic | 45.0% | |
!!! | TTTTTTGCATGAGAGGGGAG+GGG | + | chr4_1:73196413-73196432 | Msa0570820:intron | 45.0% |
GTAATTTAAGCATCTCCCGG+GGG | + | chr4_1:73196469-73196488 | Msa0570820:intron | 45.0% | |
GTTGTGTGTAGTGAACCGTA+TGG | - | chr4_1:73196713-73196732 | None:intergenic | 45.0% | |
!! | TCAAAAGGTGTTGCCTTGCA+TGG | - | chr4_1:73196797-73196816 | None:intergenic | 45.0% |
! | GTGCAATAGTTAGTCTGAGC+TGG | + | chr4_1:73197325-73197344 | Msa0570820:intron | 45.0% |
! | CACAGTTTGAGTCTAGAGCT+AGG | + | chr4_1:73197350-73197369 | Msa0570820:intron | 45.0% |
!!! | GCATGGGGAATTTTTGGAGT+TGG | + | chr4_1:73197813-73197832 | Msa0570820:intron | 45.0% |
!! | TCGCTTTGTGCTGCTTACAT+GGG | + | chr4_1:73197836-73197855 | Msa0570820:intron | 45.0% |
GATAATTGTTTGGGTGCGCA+AGG | - | chr4_1:73197921-73197940 | None:intergenic | 45.0% | |
TTAGACATCAGCACTAGGAG+TGG | - | chr4_1:73197993-73198012 | None:intergenic | 45.0% | |
CTACTAGGATGGAGTTGTGA+CGG | + | chr4_1:73198021-73198040 | Msa0570820:intron | 45.0% | |
TCAATCCTTATCGTTGGCGT+AGG | + | chr4_1:73198094-73198113 | Msa0570820:CDS | 45.0% | |
CAGATCTTGGATGCAGACAA+AGG | + | chr4_1:73198275-73198294 | Msa0570820:intron | 45.0% | |
TGGATGCAGACAAAGGAGAT+AGG | + | chr4_1:73198282-73198301 | Msa0570820:CDS | 45.0% | |
!! | ATAGATAAATAAATAAATAA+AGG | + | chr4_1:73187277-73187296 | Msa0570820:five_prime_UTR | 5.0% |
!!! | ATATTTCAAAATTATTTTAA+TGG | + | chr4_1:73189689-73189708 | Msa0570820:intron | 5.0% |
!! | AATATTTATTTATGTAAAAA+TGG | - | chr4_1:73195904-73195923 | None:intergenic | 5.0% |
!!! | GAATTTTAATTATAATAAAT+TGG | + | chr4_1:73196222-73196241 | Msa0570820:intron | 5.0% |
!! | ATAATTATTATGTAAATATA+TGG | + | chr4_1:73197640-73197659 | Msa0570820:intron | 5.0% |
TTCAAGTCTCGTGGCTACCA+AGG | + | chr4_1:73187490-73187509 | Msa0570820:CDS | 50.0% | |
CGATCTGAGAGAAGAGACCT+TGG | - | chr4_1:73187510-73187529 | None:intergenic | 50.0% | |
AGGTCTCTTCTCTCAGATCG+AGG | + | chr4_1:73187510-73187529 | Msa0570820:CDS | 50.0% | |
! | GAGGGGGTATAAGGTTGACT+TGG | + | chr4_1:73187991-73188010 | Msa0570820:intron | 50.0% |
!! | GTTGACTTGGAGATGACGAG+AGG | + | chr4_1:73188004-73188023 | Msa0570820:intron | 50.0% |
!! | AAGTCGCGTTGACTTTCCTG+CGG | - | chr4_1:73188529-73188548 | None:intergenic | 50.0% |
CTCCAGAGAGGGAGCAAAAT+AGG | + | chr4_1:73188603-73188622 | Msa0570820:intron | 50.0% | |
! | CTCCTATTTTGCTCCCTCTC+TGG | - | chr4_1:73188608-73188627 | None:intergenic | 50.0% |
CACCTTAAAGGTAGGCGATC+CGG | + | chr4_1:73188659-73188678 | Msa0570820:intron | 50.0% | |
ATCCGGATCGCCTACCTTTA+AGG | - | chr4_1:73188664-73188683 | None:intergenic | 50.0% | |
CTTCTTGCGTGGAAGAAAGG+GGG | - | chr4_1:73188795-73188814 | None:intergenic | 50.0% | |
AGAGAGAGAGAGAGAGAGAG+AGG | - | chr4_1:73189501-73189520 | None:intergenic | 50.0% | |
AAAAGCTGCAAGCCCCTAAC+AGG | - | chr4_1:73189570-73189589 | None:intergenic | 50.0% | |
TAAACAGACAGGCGCACTAC+AGG | - | chr4_1:73191189-73191208 | None:intergenic | 50.0% | |
! | GGGAGTATGGAAGAGAGAAG+AGG | + | chr4_1:73191291-73191310 | Msa0570820:intron | 50.0% |
GATCCCATAGTCTCAAAGGG+TGG | + | chr4_1:73192179-73192198 | Msa0570820:intron | 50.0% | |
!! | CTGTCCACCCTTTGAGACTA+TGG | - | chr4_1:73192186-73192205 | None:intergenic | 50.0% |
! | TTTGGAGTGTGCTCCTCTCA+AGG | + | chr4_1:73192461-73192480 | Msa0570820:intron | 50.0% |
CCACTTAGTGGGATAAGGCT+TGG | - | chr4_1:73192522-73192541 | None:intergenic | 50.0% | |
! | CCAAGCCTTATCCCACTAAG+TGG | + | chr4_1:73192519-73192538 | Msa0570820:intron | 50.0% |
CTTATCCCACTAAGTGGGGT+CGG | + | chr4_1:73192525-73192544 | Msa0570820:intron | 50.0% | |
AGGATGTTGCGTTGGATGAG+TGG | - | chr4_1:73192841-73192860 | None:intergenic | 50.0% | |
! | AAGTAAGCGTAGCGGAGATG+AGG | - | chr4_1:73192861-73192880 | None:intergenic | 50.0% |
! | CCGGTGCCAATTTATTTCGG+TGG | + | chr4_1:73192941-73192960 | Msa0570820:intron | 50.0% |
CAAGATGCGCATGCTTTCAG+TGG | - | chr4_1:73193018-73193037 | None:intergenic | 50.0% | |
!! | CTTGTTTTCATGAGGGTGGC+TGG | + | chr4_1:73193034-73193053 | Msa0570820:intron | 50.0% |
TGTGCGAGACTTACCATGTG+AGG | + | chr4_1:73193057-73193076 | Msa0570820:intron | 50.0% | |
GTGCGAGACTTACCATGTGA+GGG | + | chr4_1:73193058-73193077 | Msa0570820:intron | 50.0% | |
TGCGAGACTTACCATGTGAG+GGG | + | chr4_1:73193059-73193078 | Msa0570820:intron | 50.0% | |
ATGAGCGGCTAAGTCAGTGT+AGG | + | chr4_1:73193093-73193112 | Msa0570820:intron | 50.0% | |
GAGCTGGAGAAGCTCTATTC+TGG | + | chr4_1:73193454-73193473 | Msa0570820:CDS | 50.0% | |
CTGGAGAAGCTCTATTCTGG+TGG | + | chr4_1:73193457-73193476 | Msa0570820:CDS | 50.0% | |
AAGCTCTATTCTGGTGGCCA+AGG | + | chr4_1:73193463-73193482 | Msa0570820:CDS | 50.0% | |
GGTCTGAGAATCATGACCCA+CGG | - | chr4_1:73193512-73193531 | None:intergenic | 50.0% | |
GGGTCATGATTCTCAGACCA+AGG | + | chr4_1:73193513-73193532 | Msa0570820:CDS | 50.0% | |
TTCCTGGATTACTTGGCTGG+GGG | + | chr4_1:73193671-73193690 | Msa0570820:CDS | 50.0% | |
! | CCCTCAGGAATGGCATTTTG+AGG | - | chr4_1:73194542-73194561 | None:intergenic | 50.0% |
TACCAGTGAACAGGGGCAAA+AGG | - | chr4_1:73194566-73194585 | None:intergenic | 50.0% | |
TTGCCCCTGTTCACTGGTAT+AGG | + | chr4_1:73194567-73194586 | Msa0570820:intron | 50.0% | |
TGCCCCTGTTCACTGGTATA+GGG | + | chr4_1:73194568-73194587 | Msa0570820:intron | 50.0% | |
AGCCCTATACCAGTGAACAG+GGG | - | chr4_1:73194573-73194592 | None:intergenic | 50.0% | |
CAGCCCTATACCAGTGAACA+GGG | - | chr4_1:73194574-73194593 | None:intergenic | 50.0% | |
TCAGCCCTATACCAGTGAAC+AGG | - | chr4_1:73194575-73194594 | None:intergenic | 50.0% | |
TAATCCGGAGAGTGGGAGTT+GGG | - | chr4_1:73194617-73194636 | None:intergenic | 50.0% | |
ATAATCCGGAGAGTGGGAGT+TGG | - | chr4_1:73194618-73194637 | None:intergenic | 50.0% | |
CAGACAAGCGATTTCCTACG+TGG | + | chr4_1:73194957-73194976 | Msa0570820:CDS | 50.0% | |
GACAAGCGATTTCCTACGTG+GGG | + | chr4_1:73194959-73194978 | Msa0570820:CDS | 50.0% | |
CGATTTCCTACGTGGGGATT+TGG | + | chr4_1:73194965-73194984 | Msa0570820:CDS | 50.0% | |
! | TTTGGAGCACGACCGATTGA+TGG | + | chr4_1:73194983-73195002 | Msa0570820:CDS | 50.0% |
TGGGAGACAGGACCATCAAT+CGG | - | chr4_1:73194998-73195017 | None:intergenic | 50.0% | |
GCCAGCCAATCTGTAGCAAA+TGG | + | chr4_1:73195241-73195260 | Msa0570820:CDS | 50.0% | |
ACCAGAAATCATCCCTTCGC+CGG | + | chr4_1:73195488-73195507 | Msa0570820:intron | 50.0% | |
AATCACCAATCCCACCTCTC+CGG | - | chr4_1:73195510-73195529 | None:intergenic | 50.0% | |
TAACATAATTGGTGGGGGGG+GGG | - | chr4_1:73195762-73195781 | None:intergenic | 50.0% | |
! | TGTGCCTGTAGTAGTTTGCC+AGG | + | chr4_1:73196552-73196571 | Msa0570820:intron | 50.0% |
ATGTAAGGGGGCTGCTCAAA+AGG | - | chr4_1:73196812-73196831 | None:intergenic | 50.0% | |
!! | GTCGCTTTGTGCTGCTTACA+TGG | + | chr4_1:73197835-73197854 | Msa0570820:intron | 50.0% |
CGTCACAACTCCATCCTAGT+AGG | - | chr4_1:73198023-73198042 | None:intergenic | 50.0% | |
ATCCTTATCGTTGGCGTAGG+AGG | + | chr4_1:73198097-73198116 | Msa0570820:CDS | 50.0% | |
TCATCACAGCTAAACGCCTC+AGG | - | chr4_1:73198201-73198220 | None:intergenic | 50.0% | |
AGGCGTTTAGCTGTGATGAG+TGG | + | chr4_1:73198202-73198221 | Msa0570820:intron | 50.0% | |
AGCATGAGTTCTCAGCCCTT+TGG | - | chr4_1:73198655-73198674 | None:intergenic | 50.0% | |
CTCCAACCAGAAGGCTTGAA+CGG | - | chr4_1:73198745-73198764 | None:intergenic | 50.0% | |
CCAGGTTCAGTGTAGACTGT+AGG | - | chr4_1:73198883-73198902 | None:intergenic | 50.0% | |
CCTACAGTCTACACTGAACC+TGG | + | chr4_1:73198880-73198899 | Msa0570820:three_prime_UTR | 50.0% | |
AATTGCTGCTCCGATGTCGC+CGG | + | chr4_1:73187388-73187407 | Msa0570820:CDS | 55.0% | |
TGCCGGAGGTCTACTGAATC+CGG | + | chr4_1:73187435-73187454 | Msa0570820:CDS | 55.0% | |
TGCCGGATTCAGTAGACCTC+CGG | - | chr4_1:73187440-73187459 | None:intergenic | 55.0% | |
!! | GCGTCGTTGGAAGTGTTTGC+CGG | - | chr4_1:73187457-73187476 | None:intergenic | 55.0% |
GAAGTTATCGACGGCGTCGT+TGG | - | chr4_1:73187470-73187489 | None:intergenic | 55.0% | |
CGGTCGAGATGTGCTCTTGT+TGG | + | chr4_1:73188290-73188309 | Msa0570820:intron | 55.0% | |
! | GGATTTTCTGTGGTCCTCGC+AGG | - | chr4_1:73188440-73188459 | None:intergenic | 55.0% |
AGATTGCCTACCTTTGCCGC+AGG | + | chr4_1:73188510-73188529 | Msa0570820:intron | 55.0% | |
GACTTTCCTGCGGCAAAGGT+AGG | - | chr4_1:73188519-73188538 | None:intergenic | 55.0% | |
!! | CGTTGACTTTCCTGCGGCAA+AGG | - | chr4_1:73188523-73188542 | None:intergenic | 55.0% |
! | CGGATCGCCTACCTTTAAGG+TGG | - | chr4_1:73188661-73188680 | None:intergenic | 55.0% |
GAGCACTTGAGGAACTTGGC+CGG | + | chr4_1:73189090-73189109 | Msa0570820:CDS | 55.0% | |
TGTGCTCCTCTCAAGGTCTC+AGG | + | chr4_1:73192468-73192487 | Msa0570820:intron | 55.0% | |
CGACCCCACTTAGTGGGATA+AGG | - | chr4_1:73192527-73192546 | None:intergenic | 55.0% | |
TGTAGCCGACCCCACTTAGT+GGG | - | chr4_1:73192533-73192552 | None:intergenic | 55.0% | |
ATGTAGCCGACCCCACTTAG+TGG | - | chr4_1:73192534-73192553 | None:intergenic | 55.0% | |
ACTAAGTGGGGTCGGCTACA+TGG | + | chr4_1:73192533-73192552 | Msa0570820:intron | 55.0% | |
CGGAGATGAGGATGTTGCGT+TGG | - | chr4_1:73192849-73192868 | None:intergenic | 55.0% | |
GGGAGACCGGCAATGTTGTA+TGG | - | chr4_1:73192922-73192941 | None:intergenic | 55.0% | |
TACAACATTGCCGGTCTCCC+CGG | + | chr4_1:73192922-73192941 | Msa0570820:intron | 55.0% | |
! | TAAATTGGCACCGGGGAGAC+CGG | - | chr4_1:73192935-73192954 | None:intergenic | 55.0% |
TGAGAATCATGACCCACGGC+AGG | - | chr4_1:73193508-73193527 | None:intergenic | 55.0% | |
ATCCCCCAGCCAAGTAATCC+AGG | - | chr4_1:73193676-73193695 | None:intergenic | 55.0% | |
GGCAAAAGGTCCCTCAGGAA+TGG | - | chr4_1:73194552-73194571 | None:intergenic | 55.0% | |
! | GACCTTTTGCCCCTGTTCAC+TGG | + | chr4_1:73194561-73194580 | Msa0570820:intron | 55.0% |
GGGAGTTGGGGAAGTAAGGA+AGG | - | chr4_1:73194604-73194623 | None:intergenic | 55.0% | |
GAGTGGGAGTTGGGGAAGTA+AGG | - | chr4_1:73194608-73194627 | None:intergenic | 55.0% | |
AATCCGGAGAGTGGGAGTTG+GGG | - | chr4_1:73194616-73194635 | None:intergenic | 55.0% | |
TCCGGCGAAGGGATGATTTC+TGG | - | chr4_1:73195492-73195511 | None:intergenic | 55.0% | |
AAATCATCCCTTCGCCGGAG+AGG | + | chr4_1:73195493-73195512 | Msa0570820:intron | 55.0% | |
! | GAGGTGGGATTGGTGATTCC+TGG | + | chr4_1:73195512-73195531 | Msa0570820:intron | 55.0% |
TCCAAGCTTCTCATGGGGGA+GGG | - | chr4_1:73195726-73195745 | None:intergenic | 55.0% | |
ATCCAAGCTTCTCATGGGGG+AGG | - | chr4_1:73195727-73195746 | None:intergenic | 55.0% | |
AACATAATTGGTGGGGGGGG+GGG | - | chr4_1:73195761-73195780 | None:intergenic | 55.0% | |
ATTTAAGCATCTCCCGGGGG+AGG | + | chr4_1:73196472-73196491 | Msa0570820:intron | 55.0% | |
TTTAAGCATCTCCCGGGGGA+GGG | + | chr4_1:73196473-73196492 | Msa0570820:intron | 55.0% | |
GGATATTACAACCCTCCCCC+GGG | - | chr4_1:73196487-73196506 | None:intergenic | 55.0% | |
GGGATATTACAACCCTCCCC+CGG | - | chr4_1:73196488-73196507 | None:intergenic | 55.0% | |
GACCAATGAGAGGCCATGCA+AGG | + | chr4_1:73196781-73196800 | Msa0570820:intron | 55.0% | |
TGCCTTGCATGGCCTCTCAT+TGG | - | chr4_1:73196786-73196805 | None:intergenic | 55.0% | |
CTCCTCCTACGCCAACGATA+AGG | - | chr4_1:73198102-73198121 | None:intergenic | 55.0% | |
GTCTGTCCGTTCAAGCCTTC+TGG | + | chr4_1:73198736-73198755 | Msa0570820:three_prime_UTR | 55.0% | |
GTCCGTTCAAGCCTTCTGGT+TGG | + | chr4_1:73198740-73198759 | Msa0570820:three_prime_UTR | 55.0% | |
GCAGACATCTCTGGTGGAGC+TGG | + | chr4_1:73193438-73193457 | Msa0570820:CDS | 60.0% | |
CCACGCACACTGGTGCAAAC+TGG | - | chr4_1:73194467-73194486 | None:intergenic | 60.0% | |
CCAGTTTGCACCAGTGTGCG+TGG | + | chr4_1:73194464-73194483 | Msa0570820:intron | 60.0% | |
TTTGCACCAGTGTGCGTGGC+AGG | + | chr4_1:73194468-73194487 | Msa0570820:intron | 60.0% | |
TTGCACCAGTGTGCGTGGCA+GGG | + | chr4_1:73194469-73194488 | Msa0570820:intron | 60.0% | |
ACAGGGGCAAAAGGTCCCTC+AGG | - | chr4_1:73194557-73194576 | None:intergenic | 60.0% | |
CTTCCCCAACTCCCACTCTC+CGG | + | chr4_1:73194610-73194629 | Msa0570820:intron | 60.0% | |
CGTGCTCCAAATCCCCACGT+AGG | - | chr4_1:73194974-73194993 | None:intergenic | 60.0% | |
AATCCCACCTCTCCGGCGAA+GGG | - | chr4_1:73195503-73195522 | None:intergenic | 60.0% | |
CCAAGCTTCTCATGGGGGAG+GGG | - | chr4_1:73195725-73195744 | None:intergenic | 60.0% | |
ACATAATTGGTGGGGGGGGG+GGG | - | chr4_1:73195760-73195779 | None:intergenic | 60.0% | |
! | CAGTTCCGCCGATTGCCGTG+CGG | - | chr4_1:73187417-73187436 | None:intergenic | 65.0% |
ACGGCAATCGGCGGAACTGC+CGG | + | chr4_1:73187418-73187437 | Msa0570820:CDS | 65.0% | |
ACCAGTGTGCGTGGCAGGGT+GGG | + | chr4_1:73194473-73194492 | Msa0570820:intron | 65.0% | |
TCATCCCTTCGCCGGAGAGG+TGG | + | chr4_1:73195496-73195515 | Msa0570820:intron | 65.0% | |
CATCCCTTCGCCGGAGAGGT+GGG | + | chr4_1:73195497-73195516 | Msa0570820:intron | 65.0% | |
CAATCCCACCTCTCCGGCGA+AGG | - | chr4_1:73195504-73195523 | None:intergenic | 65.0% | |
CTTCGCCGGAGAGGTGGGAT+TGG | + | chr4_1:73195502-73195521 | Msa0570820:intron | 65.0% | |
CCCCTCCCCCATGAGAAGCT+TGG | + | chr4_1:73195722-73195741 | Msa0570820:intron | 65.0% | |
ATAATTGGTGGGGGGGGGGG+GGG | - | chr4_1:73195758-73195777 | None:intergenic | 65.0% | |
CATAATTGGTGGGGGGGGGG+GGG | - | chr4_1:73195759-73195778 | None:intergenic | 65.0% | |
TGCTGCTCCGATGTCGCCGG+TGG | + | chr4_1:73187391-73187410 | Msa0570820:CDS | 70.0% | |
GCAATCGGCGGAACTGCCGG+AGG | + | chr4_1:73187421-73187440 | Msa0570820:CDS | 70.0% | |
CACCAGTGTGCGTGGCAGGG+TGG | + | chr4_1:73194472-73194491 | Msa0570820:intron | 70.0% | |
CCAGTGTGCGTGGCAGGGTG+GGG | + | chr4_1:73194474-73194493 | Msa0570820:intron | 70.0% | |
GTGCGTGGCAGGGTGGGGTA+AGG | + | chr4_1:73194479-73194498 | Msa0570820:intron | 70.0% | |
TAATTGGTGGGGGGGGGGGG+GGG | - | chr4_1:73195757-73195776 | None:intergenic | 70.0% | |
CGTGCGGCCACCGGCGACAT+CGG | - | chr4_1:73187401-73187420 | None:intergenic | 75.0% | |
CGATGTCGCCGGTGGCCGCA+CGG | + | chr4_1:73187399-73187418 | Msa0570820:CDS | 75.0% | |
GCCGGTGGCCGCACGGCAAT+CGG | + | chr4_1:73187406-73187425 | Msa0570820:CDS | 75.0% | |
GCCGATTGCCGTGCGGCCAC+CGG | - | chr4_1:73187410-73187429 | None:intergenic | 75.0% | |
GGTGGCCGCACGGCAATCGG+CGG | + | chr4_1:73187409-73187428 | Msa0570820:CDS | 75.0% | |
CCCCACCCTGCCACGCACAC+TGG | - | chr4_1:73194477-73194496 | None:intergenic | 75.0% | |
AATTGGTGGGGGGGGGGGGG+GGG | - | chr4_1:73195756-73195775 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_1 | gene | 73187144 | 73198949 | 73187144 | ID=Msa0570820;Name=Msa0570820 |
chr4_1 | mRNA | 73187144 | 73198949 | 73187144 | ID=Msa0570820-mRNA-1;Parent=Msa0570820;Name=Msa0570820-mRNA-1;_AED=0.15;_eAED=0.15;_QI=238|1|1|1|1|1|16|399|579 |
chr4_1 | exon | 73187144 | 73187531 | 73187144 | ID=Msa0570820-mRNA-1:exon:25101;Parent=Msa0570820-mRNA-1 |
chr4_1 | exon | 73187620 | 73187667 | 73187620 | ID=Msa0570820-mRNA-1:exon:25102;Parent=Msa0570820-mRNA-1 |
chr4_1 | exon | 73189050 | 73189198 | 73189050 | ID=Msa0570820-mRNA-1:exon:25103;Parent=Msa0570820-mRNA-1 |
chr4_1 | exon | 73189290 | 73189338 | 73189290 | ID=Msa0570820-mRNA-1:exon:25104;Parent=Msa0570820-mRNA-1 |
chr4_1 | exon | 73190253 | 73190309 | 73190253 | ID=Msa0570820-mRNA-1:exon:25105;Parent=Msa0570820-mRNA-1 |
chr4_1 | exon | 73190616 | 73190801 | 73190616 | ID=Msa0570820-mRNA-1:exon:25106;Parent=Msa0570820-mRNA-1 |
chr4_1 | exon | 73190890 | 73191024 | 73190890 | ID=Msa0570820-mRNA-1:exon:25107;Parent=Msa0570820-mRNA-1 |
chr4_1 | exon | 73193284 | 73193345 | 73193284 | ID=Msa0570820-mRNA-1:exon:25108;Parent=Msa0570820-mRNA-1 |
chr4_1 | exon | 73193432 | 73193534 | 73193432 | ID=Msa0570820-mRNA-1:exon:25109;Parent=Msa0570820-mRNA-1 |
chr4_1 | exon | 73193617 | 73193731 | 73193617 | ID=Msa0570820-mRNA-1:exon:25110;Parent=Msa0570820-mRNA-1 |
chr4_1 | exon | 73194767 | 73194843 | 73194767 | ID=Msa0570820-mRNA-1:exon:25111;Parent=Msa0570820-mRNA-1 |
chr4_1 | exon | 73194917 | 73195054 | 73194917 | ID=Msa0570820-mRNA-1:exon:25112;Parent=Msa0570820-mRNA-1 |
chr4_1 | exon | 73195133 | 73195297 | 73195133 | ID=Msa0570820-mRNA-1:exon:25113;Parent=Msa0570820-mRNA-1 |
chr4_1 | exon | 73198028 | 73198141 | 73198028 | ID=Msa0570820-mRNA-1:exon:25114;Parent=Msa0570820-mRNA-1 |
chr4_1 | exon | 73198278 | 73198374 | 73198278 | ID=Msa0570820-mRNA-1:exon:25115;Parent=Msa0570820-mRNA-1 |
chr4_1 | exon | 73198456 | 73198949 | 73198456 | ID=Msa0570820-mRNA-1:exon:25116;Parent=Msa0570820-mRNA-1 |
chr4_1 | five_prime_UTR | 73187144 | 73187381 | 73187144 | ID=Msa0570820-mRNA-1:five_prime_utr;Parent=Msa0570820-mRNA-1 |
chr4_1 | CDS | 73187382 | 73187531 | 73187382 | ID=Msa0570820-mRNA-1:cds;Parent=Msa0570820-mRNA-1 |
chr4_1 | CDS | 73187620 | 73187667 | 73187620 | ID=Msa0570820-mRNA-1:cds;Parent=Msa0570820-mRNA-1 |
chr4_1 | CDS | 73189050 | 73189198 | 73189050 | ID=Msa0570820-mRNA-1:cds;Parent=Msa0570820-mRNA-1 |
chr4_1 | CDS | 73189290 | 73189338 | 73189290 | ID=Msa0570820-mRNA-1:cds;Parent=Msa0570820-mRNA-1 |
chr4_1 | CDS | 73190253 | 73190309 | 73190253 | ID=Msa0570820-mRNA-1:cds;Parent=Msa0570820-mRNA-1 |
chr4_1 | CDS | 73190616 | 73190801 | 73190616 | ID=Msa0570820-mRNA-1:cds;Parent=Msa0570820-mRNA-1 |
chr4_1 | CDS | 73190890 | 73191024 | 73190890 | ID=Msa0570820-mRNA-1:cds;Parent=Msa0570820-mRNA-1 |
chr4_1 | CDS | 73193284 | 73193345 | 73193284 | ID=Msa0570820-mRNA-1:cds;Parent=Msa0570820-mRNA-1 |
chr4_1 | CDS | 73193432 | 73193534 | 73193432 | ID=Msa0570820-mRNA-1:cds;Parent=Msa0570820-mRNA-1 |
chr4_1 | CDS | 73193617 | 73193731 | 73193617 | ID=Msa0570820-mRNA-1:cds;Parent=Msa0570820-mRNA-1 |
chr4_1 | CDS | 73194767 | 73194843 | 73194767 | ID=Msa0570820-mRNA-1:cds;Parent=Msa0570820-mRNA-1 |
chr4_1 | CDS | 73194917 | 73195054 | 73194917 | ID=Msa0570820-mRNA-1:cds;Parent=Msa0570820-mRNA-1 |
chr4_1 | CDS | 73195133 | 73195297 | 73195133 | ID=Msa0570820-mRNA-1:cds;Parent=Msa0570820-mRNA-1 |
chr4_1 | CDS | 73198028 | 73198141 | 73198028 | ID=Msa0570820-mRNA-1:cds;Parent=Msa0570820-mRNA-1 |
chr4_1 | CDS | 73198278 | 73198374 | 73198278 | ID=Msa0570820-mRNA-1:cds;Parent=Msa0570820-mRNA-1 |
chr4_1 | CDS | 73198456 | 73198550 | 73198456 | ID=Msa0570820-mRNA-1:cds;Parent=Msa0570820-mRNA-1 |
chr4_1 | three_prime_UTR | 73198551 | 73198949 | 73198551 | ID=Msa0570820-mRNA-1:three_prime_utr;Parent=Msa0570820-mRNA-1 |
Gene Sequence |
Protein sequence |