Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0570910 | PNX96111.1 | 27.603 | 605 | 352 | 20 | 19 | 562 | 14 | 593 | 1.19e-44 | 179 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0570910 | A0A2K3MZ83 | 27.603 | 605 | 352 | 20 | 19 | 562 | 14 | 593 | 5.71e-45 | 179 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0541680 | Msa0570910 | 0.822002 | 2.990248e-53 | -8.615850e-47 |
| Msa0567670 | Msa0570910 | 0.856870 | 2.401939e-62 | -8.615850e-47 |
| Msa0567690 | Msa0570910 | 0.828466 | 8.853527e-55 | -8.615850e-47 |
| Msa0567710 | Msa0570910 | 0.817494 | 3.203774e-52 | -8.615850e-47 |
| Msa0567910 | Msa0570910 | 0.848209 | 7.090573e-60 | -8.615850e-47 |
| Msa0567960 | Msa0570910 | 0.838574 | 2.653021e-57 | -8.615850e-47 |
| Msa0568000 | Msa0570910 | 0.816600 | 5.086868e-52 | -8.615850e-47 |
| Msa0570150 | Msa0570910 | 0.848681 | 5.247585e-60 | -8.615850e-47 |
| Msa0570210 | Msa0570910 | 0.899538 | 1.794878e-77 | -8.615850e-47 |
| Msa0570280 | Msa0570910 | 0.897390 | 1.473504e-76 | -8.615850e-47 |
| Msa0570300 | Msa0570910 | 0.832718 | 8.055922e-56 | -8.615850e-47 |
| Msa0570360 | Msa0570910 | 0.921862 | 2.073001e-88 | -8.615850e-47 |
| Msa0570370 | Msa0570910 | 0.889631 | 2.037941e-73 | -8.615850e-47 |
| Msa0570380 | Msa0570910 | 0.943398 | 1.293669e-102 | -8.615850e-47 |
| Msa0570410 | Msa0570910 | 0.993051 | 3.915076e-197 | -8.615850e-47 |
| Msa0570720 | Msa0570910 | 0.839910 | 1.193968e-57 | -8.615850e-47 |
| Msa0570730 | Msa0570910 | 0.884028 | 2.718930e-71 | -8.615850e-47 |
| Msa0570800 | Msa0570910 | 0.852285 | 5.103479e-61 | -8.615850e-47 |
| Msa0570820 | Msa0570910 | 0.861504 | 9.793424e-64 | -8.615850e-47 |
| Msa0570840 | Msa0570910 | 0.827717 | 1.341109e-54 | -8.615850e-47 |
| Msa0570880 | Msa0570910 | 0.817100 | 3.927977e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0570910 | MtrunA17_Chr5g0429061 | 28.539 | 438 | 238 | 16 | 154 | 567 | 24 | 410 | 2.33e-29 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 130 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTCTCAACGTAATATTTA+TGG | 0.105745 | 4_1:+73313543 | None:intergenic |
| TTAGGAGATGCTTGCTTTCT+TGG | 0.154349 | 4_1:-73312279 | Msa0570910:three_prime_UTR |
| TGCGATGAATGAAGAAATTT+AGG | 0.154365 | 4_1:+73316326 | None:intergenic |
| AAGACACCCATGATGTTAAA+TGG | 0.171851 | 4_1:-73313517 | Msa0570910:CDS |
| GAGTCAAATCTACCTTAATA+TGG | 0.181160 | 4_1:+73313312 | None:intergenic |
| ACAAGGATGAAATTATTCTT+AGG | 0.201552 | 4_1:-73314513 | Msa0570910:CDS |
| CTATGGCAACAAATAGTATT+TGG | 0.202946 | 4_1:-73315260 | Msa0570910:CDS |
| GATTCTTGTTAGAGCTATAT+TGG | 0.254725 | 4_1:-73315495 | Msa0570910:CDS |
| CCATCTGAGAAGTCATCTTC+TGG | 0.268632 | 4_1:-73316026 | Msa0570910:CDS |
| GGCTGATATGATTGCCTTAC+GGG | 0.274728 | 4_1:-73314656 | Msa0570910:CDS |
| TTGCTTGATAGATAATATTA+AGG | 0.278418 | 4_1:-73315094 | Msa0570910:CDS |
| CGCAAGCATATCACCAGTTT+AGG | 0.285754 | 4_1:-73314558 | Msa0570910:CDS |
| TGATATCTGGATCCAACTTT+AGG | 0.286480 | 4_1:-73314678 | Msa0570910:CDS |
| ATGCTTGCGCCTGAGCTTCC+TGG | 0.294504 | 4_1:+73314572 | None:intergenic |
| GTGGCTCAGATATAAATTTC+AGG | 0.314692 | 4_1:+73315181 | None:intergenic |
| AAGAAAAGTATACGCATAAT+AGG | 0.317147 | 4_1:+73314900 | None:intergenic |
| ATGAAAAGATCTAGTTCATT+TGG | 0.329809 | 4_1:+73313233 | None:intergenic |
| CTACATCATTGCCCATATTA+AGG | 0.331089 | 4_1:-73313324 | Msa0570910:CDS |
| TGTGCTAGATTAACATTAAC+AGG | 0.334320 | 4_1:-73312021 | Msa0570910:three_prime_UTR |
| GAATTCTTGAAGGGTAGTTT+TGG | 0.335164 | 4_1:+73315423 | None:intergenic |
| GTAAAACAATGTTAGTTGTT+AGG | 0.338320 | 4_1:-73312297 | Msa0570910:three_prime_UTR |
| CTTCTCAACGTAATATTTAT+GGG | 0.345810 | 4_1:+73313544 | None:intergenic |
| GCGATGAATGAAGAAATTTA+GGG | 0.351932 | 4_1:+73316327 | None:intergenic |
| ATGGATCCTGTCGTGATATC+TGG | 0.352751 | 4_1:-73314691 | Msa0570910:CDS |
| ATCTTCTGGGATCTGTGTTA+TGG | 0.357242 | 4_1:-73316012 | Msa0570910:CDS |
| AAAGATCTGAAAAGGAAAAT+CGG | 0.358497 | 4_1:-73313595 | Msa0570910:CDS |
| TCAGTGAATGACAGGCTATA+AGG | 0.358850 | 4_1:+73312321 | None:intergenic |
| TCAAATGAGGGAGCTGGAAT+TGG | 0.362836 | 4_1:-73314850 | Msa0570910:CDS |
| GTACCCTAGGGATAGGAATA+TGG | 0.367679 | 4_1:+73311946 | None:intergenic |
| GATATCTGGATCCAACTTTA+GGG | 0.374491 | 4_1:-73314677 | Msa0570910:CDS |
| AAAGCAAGCTACCATCATTA+TGG | 0.375124 | 4_1:+73315772 | None:intergenic |
| TTTCTTTCTTGAATTCTTGA+AGG | 0.376905 | 4_1:+73315413 | None:intergenic |
| TATCTTACGTTTGATATTGA+AGG | 0.377191 | 4_1:-73312075 | Msa0570910:three_prime_UTR |
| ATGAAGAAATTTAGGGTTAC+CGG | 0.377193 | 4_1:+73316334 | None:intergenic |
| ATTCTTGTTAGAGCTATATT+GGG | 0.382722 | 4_1:-73315494 | Msa0570910:CDS |
| CTCAAACCCTGACCTATCTA+TGG | 0.382846 | 4_1:-73315277 | Msa0570910:CDS |
| CTCTAAGCTGGGACAAATCT+AGG | 0.383516 | 4_1:+73312350 | None:intergenic |
| CAACTTCAGTGAAGAATAGA+AGG | 0.389396 | 4_1:-73313400 | Msa0570910:CDS |
| TGAAAAGGAAAATCGGGATA+TGG | 0.390657 | 4_1:-73313588 | Msa0570910:CDS |
| TAATTTCATCCTTGTCAAAC+AGG | 0.392595 | 4_1:+73314521 | None:intergenic |
| CCAGCTCATCCTCCCTAAAC+TGG | 0.396368 | 4_1:+73314545 | None:intergenic |
| CAAGGATGAAATTATTCTTA+GGG | 0.399877 | 4_1:-73314512 | Msa0570910:CDS |
| TCTTCTGGGATCTGTGTTAT+GGG | 0.400484 | 4_1:-73316011 | Msa0570910:CDS |
| TGCGAAGCACCAGGAAGCTC+AGG | 0.409838 | 4_1:-73314581 | Msa0570910:CDS |
| TATGGCAACAAATAGTATTT+GGG | 0.412899 | 4_1:-73315259 | Msa0570910:CDS |
| AGTCAAATCTACCTTAATAT+GGG | 0.417830 | 4_1:+73313313 | None:intergenic |
| ATTCAAATTCAAGCTTATCC+TGG | 0.420175 | 4_1:-73315657 | Msa0570910:CDS |
| GTGTTATGGGAAACTCTTCT+TGG | 0.420434 | 4_1:-73315998 | Msa0570910:intron |
| ATCTTCGTGCTCAAATGTTA+AGG | 0.424929 | 4_1:+73315731 | None:intergenic |
| TAAGGTAGATTTGACTCAAA+AGG | 0.428974 | 4_1:-73313306 | Msa0570910:CDS |
| CAGTGAATGACAGGCTATAA+GGG | 0.431361 | 4_1:+73312322 | None:intergenic |
| GCTTTCTTGGTGGAAAGGAT+TGG | 0.431676 | 4_1:-73312266 | Msa0570910:three_prime_UTR |
| GCTCTAACAAGAATCCTCTA+TGG | 0.433675 | 4_1:+73315503 | None:intergenic |
| TTTGTTGCCATAGATAGGTC+AGG | 0.434803 | 4_1:+73315270 | None:intergenic |
| CATCCCCAGCCATGAGACTA+AGG | 0.435846 | 4_1:+73316266 | None:intergenic |
| GGCATGCTTCTCAGCATCTC+TGG | 0.443123 | 4_1:+73313565 | None:intergenic |
| GATTTGCCCATTTAACATCA+TGG | 0.446315 | 4_1:+73313510 | None:intergenic |
| TCAGTTGTTGATGATAAGAA+TGG | 0.456667 | 4_1:-73315834 | Msa0570910:CDS |
| AGACACCCATGATGTTAAAT+GGG | 0.460002 | 4_1:-73313516 | Msa0570910:CDS |
| TGGTAACGATGAAAGGTAGA+AGG | 0.461927 | 4_1:+73315523 | None:intergenic |
| ACCTTTCATCGTTACCATAG+AGG | 0.464119 | 4_1:-73315517 | Msa0570910:CDS |
| CATCTGAGAAGTCATCTTCT+GGG | 0.468349 | 4_1:-73316025 | Msa0570910:CDS |
| GGTAGTTTCTTTGGGGAGGG+TGG | 0.470019 | 4_1:+73315162 | None:intergenic |
| AGACTGGAATGCACCGCAGC+CGG | 0.471238 | 4_1:+73314951 | None:intergenic |
| ATAAGGGATGAGCTCTAAGC+TGG | 0.471240 | 4_1:+73312338 | None:intergenic |
| GGGCTGATATGATTGCCTTA+CGG | 0.472172 | 4_1:-73314657 | Msa0570910:CDS |
| CCAGTTTAGGGAGGATGAGC+TGG | 0.472388 | 4_1:-73314545 | Msa0570910:CDS |
| AGGTAGAAGGATCACCATAA+AGG | 0.473131 | 4_1:+73315536 | None:intergenic |
| TGCTTGCTTTCTTGGTGGAA+AGG | 0.482167 | 4_1:-73312271 | Msa0570910:three_prime_UTR |
| GGAGATGCTTGCTTTCTTGG+TGG | 0.482968 | 4_1:-73312276 | Msa0570910:three_prime_UTR |
| TACTATTTGTTGCCATAGAT+AGG | 0.484330 | 4_1:+73315265 | None:intergenic |
| CCCTCATTTGAAGTAATGTC+AGG | 0.486972 | 4_1:+73314862 | None:intergenic |
| GATTCTTGAAAGATCTGAAA+AGG | 0.488280 | 4_1:-73313603 | Msa0570910:CDS |
| GCAAGCATATCACCAGTTTA+GGG | 0.488661 | 4_1:-73314557 | Msa0570910:CDS |
| ATTTGCCCATTTAACATCAT+GGG | 0.494953 | 4_1:+73313511 | None:intergenic |
| AAGATCTGAAAAGGAAAATC+GGG | 0.495572 | 4_1:-73313594 | Msa0570910:CDS |
| AGTAAGGAGAAGCGTGTGAC+AGG | 0.499793 | 4_1:-73313206 | Msa0570910:intron |
| CAGCTGTTGATGGCCGGCTG+CGG | 0.502306 | 4_1:-73314964 | Msa0570910:CDS |
| AGGGCGCAGTATGAACTTGC+TGG | 0.503546 | 4_1:-73313362 | Msa0570910:CDS |
| TCTGCAGTTAACCATAATGA+TGG | 0.506385 | 4_1:-73315783 | Msa0570910:CDS |
| ATTGCCGCGATTGTTTATGC+TGG | 0.506930 | 4_1:-73315204 | Msa0570910:CDS |
| TGATGTTGGCATGAGAATCA+TGG | 0.510178 | 4_1:-73312184 | Msa0570910:three_prime_UTR |
| TCCTCTATGGTAACGATGAA+AGG | 0.510188 | 4_1:+73315516 | None:intergenic |
| CACCTTGCTACCCTTGCTCC+AGG | 0.511952 | 4_1:+73315639 | None:intergenic |
| TTCTTTCTTGAATTCTTGAA+GGG | 0.514443 | 4_1:+73315414 | None:intergenic |
| ACCTGACATTACTTCAAATG+AGG | 0.517714 | 4_1:-73314863 | Msa0570910:CDS |
| ACGTTTGATATTGAAGGCTA+CGG | 0.522131 | 4_1:-73312069 | Msa0570910:three_prime_UTR |
| CCAGAAGATGACTTCTCAGA+TGG | 0.523618 | 4_1:+73316026 | None:intergenic |
| TGAGCCAAAGGAAGGTCATA+CGG | 0.524010 | 4_1:-73313447 | Msa0570910:intron |
| GAATCACAGCTGTTGATGGC+CGG | 0.524635 | 4_1:-73314970 | Msa0570910:CDS |
| AATAGGTAGTTTCTTTGGGG+AGG | 0.526238 | 4_1:+73315158 | None:intergenic |
| ATAGGTAGTTTCTTTGGGGA+GGG | 0.526659 | 4_1:+73315159 | None:intergenic |
| AATCATGGCTTTCTGCATGT+TGG | 0.530486 | 4_1:-73312169 | Msa0570910:three_prime_UTR |
| ATTACTTCAAATGAGGGAGC+TGG | 0.531617 | 4_1:-73314856 | Msa0570910:CDS |
| GCAGTATGAACTTGCTGGAA+AGG | 0.534391 | 4_1:-73313357 | Msa0570910:CDS |
| TCACGAGTCAGTGATTTGCT+TGG | 0.538830 | 4_1:-73316051 | Msa0570910:CDS |
| AATCATGATGGTAGAGATCA+AGG | 0.544381 | 4_1:-73313491 | Msa0570910:CDS |
| GAACTTGCTGGAAAGGCTGC+TGG | 0.549202 | 4_1:-73313350 | Msa0570910:CDS |
| GGAATCATACAAAATTCGTA+TGG | 0.554540 | 4_1:-73314710 | Msa0570910:CDS |
| TTCAAGCTTATCCTGGAGCA+AGG | 0.559481 | 4_1:-73315650 | Msa0570910:CDS |
| AATGATCTCTGCGAAGCACC+AGG | 0.560183 | 4_1:-73314590 | Msa0570910:CDS |
| GGGGAGAGTAGCGGTTGCGG+CGG | 0.561187 | 4_1:+73316288 | None:intergenic |
| CTTGTCGAGATCGTCCCGTA+AGG | 0.561798 | 4_1:+73314642 | None:intergenic |
| GAGCCAAAGGAAGGTCATAC+GGG | 0.565166 | 4_1:-73313446 | Msa0570910:intron |
| ATCCCCAGCCATGAGACTAA+GGG | 0.568834 | 4_1:+73316267 | None:intergenic |
| AATCATATCAGCCCTAAAGT+TGG | 0.571436 | 4_1:+73314666 | None:intergenic |
| TTGTTGCCATAGATAGGTCA+GGG | 0.572061 | 4_1:+73315271 | None:intergenic |
| AATAATCAACTTAATTGTGA+TGG | 0.572786 | 4_1:-73315006 | Msa0570910:CDS |
| TTGGATCCAGATATCACGAC+AGG | 0.581700 | 4_1:+73314685 | None:intergenic |
| ATATTGGGTTAATAAGAGAC+TGG | 0.584755 | 4_1:-73315479 | Msa0570910:CDS |
| GATGATGATAGTAAACGTAA+AGG | 0.586994 | 4_1:-73316247 | Msa0570910:intron |
| ATCCTGGAGCAAGGGTAGCA+AGG | 0.587922 | 4_1:-73315641 | Msa0570910:intron |
| CGGGACGATCTCGACAAGAA+CGG | 0.588857 | 4_1:-73314637 | Msa0570910:intron |
| AATAATAGCATCTGAACAGA+CGG | 0.589428 | 4_1:+73315806 | None:intergenic |
| CGATCATCAGCAAAATCAAG+AGG | 0.590757 | 4_1:+73316092 | None:intergenic |
| TAAAACTACTTCAGAAGCAG+AGG | 0.614916 | 4_1:-73314770 | Msa0570910:CDS |
| AATAATACAGTGTTCACAGT+AGG | 0.616836 | 4_1:+73315224 | None:intergenic |
| CCTGACATTACTTCAAATGA+GGG | 0.618975 | 4_1:-73314862 | Msa0570910:CDS |
| AATTACAGATATTCCAGTGA+CGG | 0.621656 | 4_1:-73315873 | Msa0570910:CDS |
| GATGGTAGAGATCAAGGCCA+TGG | 0.624513 | 4_1:-73313485 | Msa0570910:intron |
| TGAATTTGTTGCAGTCCCGA+TGG | 0.625515 | 4_1:-73313107 | Msa0570910:intron |
| GTTAAATGGGCAAATCATGA+TGG | 0.627611 | 4_1:-73313503 | Msa0570910:CDS |
| TCAAGCTTATCCTGGAGCAA+GGG | 0.628958 | 4_1:-73315649 | Msa0570910:CDS |
| TCCCCAGCCATGAGACTAAG+GGG | 0.630856 | 4_1:+73316268 | None:intergenic |
| TAAGGGATGAGCTCTAAGCT+GGG | 0.639362 | 4_1:+73312339 | None:intergenic |
| GGCAACAAATAGTATTTGGG+AGG | 0.647588 | 4_1:-73315256 | Msa0570910:CDS |
| AGCATATCACCAGTTTAGGG+AGG | 0.671078 | 4_1:-73314554 | Msa0570910:CDS |
| CAGGCCAGCATAAACAATCG+CGG | 0.692749 | 4_1:+73315200 | None:intergenic |
| CCCCAGCCATGAGACTAAGG+GGG | 0.712459 | 4_1:+73316269 | None:intergenic |
| TGAGCTGGACCTGTTTGACA+AGG | 0.731803 | 4_1:-73314530 | Msa0570910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACATAAACAAAAAAAAAAA+AGG | + | chr4_1:73314717-73314736 | None:intergenic | 10.0% |
| !! | AATTCAAGAAAGAAAAAAAA+TGG | - | chr4_1:73312947-73312966 | Msa0570910:intron | 15.0% |
| !! | AGAATGTCAATTTAAATATA+AGG | - | chr4_1:73314580-73314599 | Msa0570910:CDS | 15.0% |
| !! | AATTTGAACAAAAGAAATTT+AGG | - | chr4_1:73314635-73314654 | Msa0570910:intron | 15.0% |
| !!! | TATTTCATGTCAAATTTTTT+CGG | + | chr4_1:73315467-73315486 | None:intergenic | 15.0% |
| !!! | TATTTGTCTTTTTAGTAATT+AGG | - | chr4_1:73315546-73315565 | Msa0570910:intron | 15.0% |
| !!! | TATTTTGAATCAAATAAAAG+AGG | - | chr4_1:73316366-73316385 | Msa0570910:five_prime_UTR | 15.0% |
| !!! | ATTTTGAATCAAATAAAAGA+GGG | - | chr4_1:73316367-73316386 | Msa0570910:five_prime_UTR | 15.0% |
| !!! | GAAATTTTTAGTTTTAGTGA+CGG | - | chr4_1:73312196-73312215 | Msa0570910:three_prime_UTR | 20.0% |
| !!! | TATTTGTTAAATATATGTGC+AGG | - | chr4_1:73313044-73313063 | Msa0570910:intron | 20.0% |
| !!! | TCACTTTTTTTGACAAAAAT+AGG | + | chr4_1:73313214-73313233 | None:intergenic | 20.0% |
| !! | TTGCTTGATAGATAATATTA+AGG | - | chr4_1:73313258-73313277 | Msa0570910:CDS | 20.0% |
| !! | AATAATCAACTTAATTGTGA+TGG | - | chr4_1:73313346-73313365 | Msa0570910:CDS | 20.0% |
| !!! | CTTTTTATCTCATTAATAGA+AGG | - | chr4_1:73313920-73313939 | Msa0570910:intron | 20.0% |
| !! | TTTGTTAAAATTACTTGCAA+TGG | + | chr4_1:73314241-73314260 | None:intergenic | 20.0% |
| !! | AAATTAGAGGTTAAAAATGT+TGG | + | chr4_1:73314304-73314323 | None:intergenic | 20.0% |
| !! | TGAGATATAATTCAAATTAG+AGG | + | chr4_1:73314317-73314336 | None:intergenic | 20.0% |
| !!! | AAATGATTTTCTTTGCAATT+TGG | + | chr4_1:73314350-73314369 | None:intergenic | 20.0% |
| !!! | ATTGCAAAGAAAATCATTTT+AGG | - | chr4_1:73314351-73314370 | Msa0570910:intron | 20.0% |
| !!! | TTGCAAAGAAAATCATTTTA+GGG | - | chr4_1:73314352-73314371 | Msa0570910:intron | 20.0% |
| !!! | ATAATGTGTTTTGTATGATT+TGG | + | chr4_1:73314670-73314689 | None:intergenic | 20.0% |
| !!! | TGTTTTTAACATTCTTCAAA+GGG | + | chr4_1:73315292-73315311 | None:intergenic | 20.0% |
| !!! | TTGTTTTTAACATTCTTCAA+AGG | + | chr4_1:73315293-73315312 | None:intergenic | 20.0% |
| !! | TGATAATCTTTATTAGTAAG+TGG | - | chr4_1:73315318-73315337 | Msa0570910:intron | 20.0% |
| !! | ATACTAAATAGCAAAATAGA+AGG | + | chr4_1:73315353-73315372 | None:intergenic | 20.0% |
| !! | TAGATATGTCTGATAATATT+TGG | - | chr4_1:73315394-73315413 | Msa0570910:intron | 20.0% |
| !!! | ATTTCATGTCAAATTTTTTC+GGG | + | chr4_1:73315466-73315485 | None:intergenic | 20.0% |
| !! | CTGTATAAACAAAAAAAGAA+GGG | + | chr4_1:73315593-73315612 | None:intergenic | 20.0% |
| !! | TCTGTATAAACAAAAAAAGA+AGG | + | chr4_1:73315594-73315613 | None:intergenic | 20.0% |
| !!! | ATAACGTAAATAGCTTTAAA+GGG | + | chr4_1:73315650-73315669 | None:intergenic | 20.0% |
| !!! | AATAACGTAAATAGCTTTAA+AGG | + | chr4_1:73315651-73315670 | None:intergenic | 20.0% |
| !! | ATTTACGTTATTCTGTATTA+TGG | - | chr4_1:73315659-73315678 | Msa0570910:CDS | 20.0% |
| !! | TTTACGTTATTCTGTATTAT+GGG | - | chr4_1:73315660-73315679 | Msa0570910:CDS | 20.0% |
| !! | TGAATAAAAAAACTTTCTTC+AGG | + | chr4_1:73316229-73316248 | None:intergenic | 20.0% |
| ! | TTAAAAAAGCAATGGTCAAA+AGG | - | chr4_1:73311978-73311997 | Msa0570910:three_prime_UTR | 25.0% |
| ! | CAAAAGGTAAATGTGAAAAA+AGG | - | chr4_1:73311994-73312013 | Msa0570910:three_prime_UTR | 25.0% |
| ! | AATCAAATGAAGTAACTAAG+AGG | + | chr4_1:73312394-73312413 | None:intergenic | 25.0% |
| !!! | TGATTTTATTTGGAATTTGC+AGG | - | chr4_1:73312456-73312475 | Msa0570910:intron | 25.0% |
| !!! | TTTTTTATGAACAGCCTTTA+TGG | - | chr4_1:73312802-73312821 | Msa0570910:intron | 25.0% |
| ! | ATTCTTGTTAGAGCTATATT+GGG | - | chr4_1:73312858-73312877 | Msa0570910:intron | 25.0% |
| ! | TTCTTTCTTGAATTCTTGAA+GGG | + | chr4_1:73312941-73312960 | None:intergenic | 25.0% |
| ! | TTTCTTTCTTGAATTCTTGA+AGG | + | chr4_1:73312942-73312961 | None:intergenic | 25.0% |
| !!! | ATCTTCTATCTAGTTTTCTA+TGG | - | chr4_1:73313010-73313029 | Msa0570910:intron | 25.0% |
| ! | TATGGCAACAAATAGTATTT+GGG | - | chr4_1:73313093-73313112 | Msa0570910:intron | 25.0% |
| ! | AAAAATAGGTAGTTTCTTTG+GGG | + | chr4_1:73313200-73313219 | None:intergenic | 25.0% |
| ! | CAAAAATAGGTAGTTTCTTT+GGG | + | chr4_1:73313201-73313220 | None:intergenic | 25.0% |
| ! | ACAAAAATAGGTAGTTTCTT+TGG | + | chr4_1:73313202-73313221 | None:intergenic | 25.0% |
| !! | AAGAAAAGTATACGCATAAT+AGG | + | chr4_1:73313455-73313474 | None:intergenic | 25.0% |
| !! | GAATGTGATTTTACAAACAA+CGG | - | chr4_1:73313550-73313569 | Msa0570910:CDS | 25.0% |
| ! | ACAAGGATGAAATTATTCTT+AGG | - | chr4_1:73313839-73313858 | Msa0570910:intron | 25.0% |
| ! | CAAGGATGAAATTATTCTTA+GGG | - | chr4_1:73313840-73313859 | Msa0570910:intron | 25.0% |
| !! | CTTTTCATTCTTAAAGATAG+AGG | + | chr4_1:73313948-73313967 | None:intergenic | 25.0% |
| !! | GCAAACACATATCATAATTT+TGG | - | chr4_1:73313995-73314014 | Msa0570910:intron | 25.0% |
| ! | TTCAAACATCTTAACTAACT+TGG | - | chr4_1:73314201-73314220 | Msa0570910:intron | 25.0% |
| ! | TATAAACTCAGATTGTAGTT+AGG | + | chr4_1:73314264-73314283 | None:intergenic | 25.0% |
| !!! | ATTTTAGGGTGTTAATTAGA+TGG | - | chr4_1:73314366-73314385 | Msa0570910:intron | 25.0% |
| ! | ATAGTATAGGAAAGCTATAA+TGG | + | chr4_1:73314408-73314427 | None:intergenic | 25.0% |
| ! | ACTATGCTCAAAAATAGTAT+AGG | + | chr4_1:73314421-73314440 | None:intergenic | 25.0% |
| ! | TTGGCATAACAATCAAATAA+TGG | + | chr4_1:73314477-73314496 | None:intergenic | 25.0% |
| ! | AAAGATCTGAAAAGGAAAAT+CGG | - | chr4_1:73314757-73314776 | Msa0570910:CDS | 25.0% |
| ! | CTTCTCAACGTAATATTTAT+GGG | + | chr4_1:73314811-73314830 | None:intergenic | 25.0% |
| ! | ACTTCTCAACGTAATATTTA+TGG | + | chr4_1:73314812-73314831 | None:intergenic | 25.0% |
| !!! | AAGGCATTTTAAATTTAGCA+GGG | - | chr4_1:73314971-73314990 | Msa0570910:CDS | 25.0% |
| ! | AGTCAAATCTACCTTAATAT+GGG | + | chr4_1:73315042-73315061 | None:intergenic | 25.0% |
| !! | ATGAAAAGATCTAGTTCATT+TGG | + | chr4_1:73315122-73315141 | None:intergenic | 25.0% |
| !! | AGATCTTTTCATGTATAGTA+AGG | - | chr4_1:73315130-73315149 | Msa0570910:CDS | 25.0% |
| !!! | TTTCATGTCAAATTTTTTCG+GGG | + | chr4_1:73315465-73315484 | None:intergenic | 25.0% |
| ! | GATTGTTAAATAACTTGAAC+CGG | - | chr4_1:73315758-73315777 | Msa0570910:CDS | 25.0% |
| ! | AATATTCAAACTGAAAGAGA+GGG | + | chr4_1:73315857-73315876 | None:intergenic | 25.0% |
| ! | AAATATTCAAACTGAAAGAG+AGG | + | chr4_1:73315858-73315877 | None:intergenic | 25.0% |
| !!! | TCGTTCTTATTTCTAATTAC+AGG | - | chr4_1:73315948-73315967 | Msa0570910:intron | 25.0% |
| !!! | TCTTATTTCTAATTACAGGA+AGG | - | chr4_1:73315952-73315971 | Msa0570910:intron | 25.0% |
| ! | GTAAAACAATGTTAGTTGTT+AGG | - | chr4_1:73316055-73316074 | Msa0570910:CDS | 25.0% |
| !!! | CTTGATTATGTTTTTGATGT+TGG | - | chr4_1:73316154-73316173 | Msa0570910:intron | 25.0% |
| !!! | TTCATTTTAGTTTGCATGTT+TGG | - | chr4_1:73316245-73316264 | Msa0570910:intron | 25.0% |
| !!! | TCATTTTAGTTTGCATGTTT+GGG | - | chr4_1:73316246-73316265 | Msa0570910:intron | 25.0% |
| ! | TATCTTACGTTTGATATTGA+AGG | - | chr4_1:73316277-73316296 | Msa0570910:exon | 25.0% |
| ! | ATGAAGAAATTTAGGGTTAC+CGG | + | chr4_1:73312021-73312040 | None:intergenic | 30.0% |
| GCGATGAATGAAGAAATTTA+GGG | + | chr4_1:73312028-73312047 | None:intergenic | 30.0% | |
| TGCGATGAATGAAGAAATTT+AGG | + | chr4_1:73312029-73312048 | None:intergenic | 30.0% | |
| GATGATGATAGTAAACGTAA+AGG | - | chr4_1:73312105-73312124 | Msa0570910:three_prime_UTR | 30.0% | |
| AATTACAGATATTCCAGTGA+CGG | - | chr4_1:73312479-73312498 | Msa0570910:intron | 30.0% | |
| !! | TCAGTTGTTGATGATAAGAA+TGG | - | chr4_1:73312518-73312537 | Msa0570910:intron | 30.0% |
| AATAATAGCATCTGAACAGA+CGG | + | chr4_1:73312549-73312568 | None:intergenic | 30.0% | |
| ATTCAAATTCAAGCTTATCC+TGG | - | chr4_1:73312695-73312714 | Msa0570910:intron | 30.0% | |
| ACACAAACCTACCTTATTAT+GGG | - | chr4_1:73312753-73312772 | Msa0570910:intron | 30.0% | |
| GATTCTTGTTAGAGCTATAT+TGG | - | chr4_1:73312857-73312876 | Msa0570910:intron | 30.0% | |
| ATATTGGGTTAATAAGAGAC+TGG | - | chr4_1:73312873-73312892 | Msa0570910:intron | 30.0% | |
| ! | TACTATTTGTTGCCATAGAT+AGG | + | chr4_1:73313090-73313109 | None:intergenic | 30.0% |
| CTATGGCAACAAATAGTATT+TGG | - | chr4_1:73313092-73313111 | Msa0570910:intron | 30.0% | |
| AATAATACAGTGTTCACAGT+AGG | + | chr4_1:73313131-73313150 | None:intergenic | 30.0% | |
| CAGTACATAGAAAATAAGAC+TGG | + | chr4_1:73313420-73313439 | None:intergenic | 30.0% | |
| !!! | ATGTTTTGAAAAAAGAGCTG+AGG | - | chr4_1:73313621-73313640 | Msa0570910:intron | 30.0% |
| GGAATCATACAAAATTCGTA+TGG | - | chr4_1:73313642-73313661 | Msa0570910:intron | 30.0% | |
| TAATTTCATCCTTGTCAAAC+AGG | + | chr4_1:73313834-73313853 | None:intergenic | 30.0% | |
| CCATTGATATTACATGACTA+AGG | + | chr4_1:73314059-73314078 | None:intergenic | 30.0% | |
| CCTTAGTCATGTAATATCAA+TGG | - | chr4_1:73314056-73314075 | Msa0570910:intron | 30.0% | |
| CATGCTTCAATAAACCAATT+TGG | + | chr4_1:73314133-73314152 | None:intergenic | 30.0% | |
| ! | CAAATTGGTTTATTGAAGCA+TGG | - | chr4_1:73314131-73314150 | Msa0570910:intron | 30.0% |
| TTGAAGCACAAACAACTAAA+CGG | + | chr4_1:73314186-73314205 | None:intergenic | 30.0% | |
| !! | TATTTTTGAGCATAGTGTGA+TGG | - | chr4_1:73314425-73314444 | Msa0570910:intron | 30.0% |
| CAAGCACTAATAATTGAGTT+TGG | + | chr4_1:73314496-73314515 | None:intergenic | 30.0% | |
| ACTCAATTATTAGTGCTTGA+AGG | - | chr4_1:73314497-73314516 | Msa0570910:CDS | 30.0% | |
| GATTCTTGAAAGATCTGAAA+AGG | - | chr4_1:73314749-73314768 | Msa0570910:CDS | 30.0% | |
| AAGATCTGAAAAGGAAAATC+GGG | - | chr4_1:73314758-73314777 | Msa0570910:CDS | 30.0% | |
| ATTTGCCCATTTAACATCAT+GGG | + | chr4_1:73314844-73314863 | None:intergenic | 30.0% | |
| !!! | GAAGGCATTTTAAATTTAGC+AGG | - | chr4_1:73314970-73314989 | Msa0570910:CDS | 30.0% |
| GAGTCAAATCTACCTTAATA+TGG | + | chr4_1:73315043-73315062 | None:intergenic | 30.0% | |
| TAAGGTAGATTTGACTCAAA+AGG | - | chr4_1:73315046-73315065 | Msa0570910:CDS | 30.0% | |
| AGTTCATTTGGATCAAAAAC+AGG | + | chr4_1:73315110-73315129 | None:intergenic | 30.0% | |
| ATATTCAAACTGAAAGAGAG+GGG | + | chr4_1:73315856-73315875 | None:intergenic | 30.0% | |
| TGTGCTAGATTAACATTAAC+AGG | - | chr4_1:73316331-73316350 | Msa0570910:five_prime_UTR | 30.0% | |
| ! | TTTTTAACGTAGGCTCTGTT+TGG | + | chr4_1:73311965-73311984 | None:intergenic | 35.0% |
| AGCCTACGTTAAAAAAGCAA+TGG | - | chr4_1:73311970-73311989 | Msa0570910:three_prime_UTR | 35.0% | |
| !!! | GACCATTGCTTTTTTAACGT+AGG | + | chr4_1:73311975-73311994 | None:intergenic | 35.0% |
| GGTAAATGTGAAAAAAGGTC+CGG | - | chr4_1:73311999-73312018 | Msa0570910:three_prime_UTR | 35.0% | |
| !! | AGTAAACGTAAAGGTACTCT+TGG | - | chr4_1:73312114-73312133 | Msa0570910:three_prime_UTR | 35.0% |
| GCAGAAACAGAAACAAACTT+GGG | + | chr4_1:73312142-73312161 | None:intergenic | 35.0% | |
| TCTGCAGTTAACCATAATGA+TGG | - | chr4_1:73312569-73312588 | Msa0570910:intron | 35.0% | |
| AAAGCAAGCTACCATCATTA+TGG | + | chr4_1:73312583-73312602 | None:intergenic | 35.0% | |
| ATCTTCGTGCTCAAATGTTA+AGG | + | chr4_1:73312624-73312643 | None:intergenic | 35.0% | |
| !!! | AGCACGAAGATGTTTTAGTT+AGG | - | chr4_1:73312633-73312652 | Msa0570910:intron | 35.0% |
| !!! | GCACGAAGATGTTTTAGTTA+GGG | - | chr4_1:73312634-73312653 | Msa0570910:intron | 35.0% |
| !!! | GAAGATGTTTTAGTTAGGGA+AGG | - | chr4_1:73312638-73312657 | Msa0570910:intron | 35.0% |
| TTTAGTTAGGGAAGGATTTG+TGG | - | chr4_1:73312646-73312665 | Msa0570910:intron | 35.0% | |
| CACACAAACCTACCTTATTA+TGG | - | chr4_1:73312752-73312771 | Msa0570910:intron | 35.0% | |
| ! | GAATTCTTGAAGGGTAGTTT+TGG | + | chr4_1:73312932-73312951 | None:intergenic | 35.0% |
| ! | AAAATGGAAAGAGTACGTAC+TGG | - | chr4_1:73312963-73312982 | Msa0570910:intron | 35.0% |
| GTGGCTCAGATATAAATTTC+AGG | + | chr4_1:73313174-73313193 | None:intergenic | 35.0% | |
| ! | TTTTGAATCACAGCTGTTGA+TGG | - | chr4_1:73313378-73313397 | Msa0570910:CDS | 35.0% |
| ACCTGACATTACTTCAAATG+AGG | - | chr4_1:73313489-73313508 | Msa0570910:CDS | 35.0% | |
| CCTGACATTACTTCAAATGA+GGG | - | chr4_1:73313490-73313509 | Msa0570910:CDS | 35.0% | |
| ! | TGTGATTTTACAAACAACGG+AGG | - | chr4_1:73313553-73313572 | Msa0570910:CDS | 35.0% |
| ! | GTGATTTTACAAACAACGGA+GGG | - | chr4_1:73313554-73313573 | Msa0570910:CDS | 35.0% |
| ! | TGATTTTACAAACAACGGAG+GGG | - | chr4_1:73313555-73313574 | Msa0570910:CDS | 35.0% |
| TAAAACTACTTCAGAAGCAG+AGG | - | chr4_1:73313582-73313601 | Msa0570910:CDS | 35.0% | |
| TGATATCTGGATCCAACTTT+AGG | - | chr4_1:73313674-73313693 | Msa0570910:intron | 35.0% | |
| GATATCTGGATCCAACTTTA+GGG | - | chr4_1:73313675-73313694 | Msa0570910:intron | 35.0% | |
| AATCATATCAGCCCTAAAGT+TGG | + | chr4_1:73313689-73313708 | None:intergenic | 35.0% | |
| TATCAATGGAATGAGTGACA+TGG | - | chr4_1:73314070-73314089 | Msa0570910:intron | 35.0% | |
| TTGCATAGCAAGTTCTTAGT+TGG | - | chr4_1:73314095-73314114 | Msa0570910:intron | 35.0% | |
| GTTCTTAGTTGGAAATGTGA+TGG | - | chr4_1:73314106-73314125 | Msa0570910:intron | 35.0% | |
| TGAAGCACAAACAACTAAAC+GGG | + | chr4_1:73314185-73314204 | None:intergenic | 35.0% | |
| TGAAAAGGAAAATCGGGATA+TGG | - | chr4_1:73314764-73314783 | Msa0570910:CDS | 35.0% | |
| AAGACACCCATGATGTTAAA+TGG | - | chr4_1:73314835-73314854 | Msa0570910:intron | 35.0% | |
| AGACACCCATGATGTTAAAT+GGG | - | chr4_1:73314836-73314855 | Msa0570910:intron | 35.0% | |
| GATTTGCCCATTTAACATCA+TGG | + | chr4_1:73314845-73314864 | None:intergenic | 35.0% | |
| GTTAAATGGGCAAATCATGA+TGG | - | chr4_1:73314849-73314868 | Msa0570910:CDS | 35.0% | |
| AATCATGATGGTAGAGATCA+AGG | - | chr4_1:73314861-73314880 | Msa0570910:CDS | 35.0% | |
| CAACTTCAGTGAAGAATAGA+AGG | - | chr4_1:73314952-73314971 | Msa0570910:intron | 35.0% | |
| CTACATCATTGCCCATATTA+AGG | - | chr4_1:73315028-73315047 | Msa0570910:CDS | 35.0% | |
| CAGATCAAACAGCTTGTATT+CGG | + | chr4_1:73315428-73315447 | None:intergenic | 35.0% | |
| !! | CAACCACATGAATTTGTTAC+CGG | + | chr4_1:73315793-73315812 | None:intergenic | 35.0% |
| TATTCAAACTGAAAGAGAGG+GGG | + | chr4_1:73315855-73315874 | None:intergenic | 35.0% | |
| AATAAGAACGAATCGACATG+AGG | + | chr4_1:73315939-73315958 | None:intergenic | 35.0% | |
| ! | GTTTTACTTCAGTGAATGAC+AGG | + | chr4_1:73316042-73316061 | None:intergenic | 35.0% |
| ACGTTTGATATTGAAGGCTA+CGG | - | chr4_1:73316283-73316302 | Msa0570910:five_prime_UTR | 35.0% | |
| CGCAGAAACAGAAACAAACT+TGG | + | chr4_1:73312143-73312162 | None:intergenic | 40.0% | |
| CGATCATCAGCAAAATCAAG+AGG | + | chr4_1:73312263-73312282 | None:intergenic | 40.0% | |
| ! | CTTGATTTTGCTGATGATCG+TGG | - | chr4_1:73312263-73312282 | Msa0570910:three_prime_UTR | 40.0% |
| CATCTGAGAAGTCATCTTCT+GGG | - | chr4_1:73312327-73312346 | Msa0570910:exon | 40.0% | |
| !! | ATCTTCTGGGATCTGTGTTA+TGG | - | chr4_1:73312340-73312359 | Msa0570910:CDS | 40.0% |
| !! | TCTTCTGGGATCTGTGTTAT+GGG | - | chr4_1:73312341-73312360 | Msa0570910:CDS | 40.0% |
| GTGTTATGGGAAACTCTTCT+TGG | - | chr4_1:73312354-73312373 | Msa0570910:CDS | 40.0% | |
| !! | TTGCTTTTCTTCGAGGATTC+TGG | - | chr4_1:73312596-73312615 | Msa0570910:intron | 40.0% |
| AAGGATTTGTGGACAGGTTA+GGG | - | chr4_1:73312657-73312676 | Msa0570910:intron | 40.0% | |
| TAAGGTAGGTTTGTGTGCTA+AGG | + | chr4_1:73312749-73312768 | None:intergenic | 40.0% | |
| AGGTAGAAGGATCACCATAA+AGG | + | chr4_1:73312819-73312838 | None:intergenic | 40.0% | |
| ! | TGGTAACGATGAAAGGTAGA+AGG | + | chr4_1:73312832-73312851 | None:intergenic | 40.0% |
| ACCTTTCATCGTTACCATAG+AGG | - | chr4_1:73312835-73312854 | Msa0570910:intron | 40.0% | |
| ! | TCCTCTATGGTAACGATGAA+AGG | + | chr4_1:73312839-73312858 | None:intergenic | 40.0% |
| GCTCTAACAAGAATCCTCTA+TGG | + | chr4_1:73312852-73312871 | None:intergenic | 40.0% | |
| TTGTTGCCATAGATAGGTCA+GGG | + | chr4_1:73313084-73313103 | None:intergenic | 40.0% | |
| TTTGTTGCCATAGATAGGTC+AGG | + | chr4_1:73313085-73313104 | None:intergenic | 40.0% | |
| GGCAACAAATAGTATTTGGG+AGG | - | chr4_1:73313096-73313115 | Msa0570910:intron | 40.0% | |
| ! | ATAGGTAGTTTCTTTGGGGA+GGG | + | chr4_1:73313196-73313215 | None:intergenic | 40.0% |
| ! | AATAGGTAGTTTCTTTGGGG+AGG | + | chr4_1:73313197-73313216 | None:intergenic | 40.0% |
| TCACGTGATTCAAAACTGCA+AGG | - | chr4_1:73313286-73313305 | Msa0570910:CDS | 40.0% | |
| ! | CCCTCATTTGAAGTAATGTC+AGG | + | chr4_1:73313493-73313512 | None:intergenic | 40.0% |
| ATTACTTCAAATGAGGGAGC+TGG | - | chr4_1:73313496-73313515 | Msa0570910:CDS | 40.0% | |
| AAGAACGGTAAATGCTTTCC+TGG | - | chr4_1:73313730-73313749 | Msa0570910:intron | 40.0% | |
| GAGATCATTGCTCTTAAACC+AGG | + | chr4_1:73313751-73313770 | None:intergenic | 40.0% | |
| GCAAGCATATCACCAGTTTA+GGG | - | chr4_1:73313795-73313814 | Msa0570910:intron | 40.0% | |
| !! | GGAAATGTGATGGACCAAAT+TGG | - | chr4_1:73314116-73314135 | Msa0570910:intron | 40.0% |
| GCATGGCATAACAATCACAA+TGG | - | chr4_1:73314148-73314167 | Msa0570910:intron | 40.0% | |
| ! | ATGGACTGATGATGAGTTTG+TGG | - | chr4_1:73314444-73314463 | Msa0570910:intron | 40.0% |
| AGGCCATGGTTATGATATCA+TGG | - | chr4_1:73314881-73314900 | Msa0570910:CDS | 40.0% | |
| CAGCCATGATATCATAACCA+TGG | + | chr4_1:73314887-73314906 | None:intergenic | 40.0% | |
| ATTCTTCAAAGGGCCTATTC+TGG | + | chr4_1:73315282-73315301 | None:intergenic | 40.0% | |
| ! | AGACAGTGAATTTGAAGCCA+TGG | - | chr4_1:73315611-73315630 | Msa0570910:intron | 40.0% |
| !! | GTAAATAGCTTTAAAGGGCC+AGG | + | chr4_1:73315645-73315664 | None:intergenic | 40.0% |
| TGCCTTAACTTCAGACAGTA+GGG | + | chr4_1:73315736-73315755 | None:intergenic | 40.0% | |
| TTGTTACCGGCAGAAAATTC+CGG | + | chr4_1:73315780-73315799 | None:intergenic | 40.0% | |
| !! | CTAGTTTTCCTATGCCTTTC+CGG | - | chr4_1:73315813-73315832 | Msa0570910:CDS | 40.0% |
| ATTCAAACTGAAAGAGAGGG+GGG | + | chr4_1:73315854-73315873 | None:intergenic | 40.0% | |
| CAGTGAATGACAGGCTATAA+GGG | + | chr4_1:73316033-73316052 | None:intergenic | 40.0% | |
| TCAGTGAATGACAGGCTATA+AGG | + | chr4_1:73316034-73316053 | None:intergenic | 40.0% | |
| TTAGGAGATGCTTGCTTTCT+TGG | - | chr4_1:73316073-73316092 | Msa0570910:CDS | 40.0% | |
| TGATGTTGGCATGAGAATCA+TGG | - | chr4_1:73316168-73316187 | Msa0570910:intron | 40.0% | |
| AATCATGGCTTTCTGCATGT+TGG | - | chr4_1:73316183-73316202 | Msa0570910:intron | 40.0% | |
| !! | TCACGAGTCAGTGATTTGCT+TGG | - | chr4_1:73312301-73312320 | Msa0570910:three_prime_UTR | 45.0% |
| CCAGAAGATGACTTCTCAGA+TGG | + | chr4_1:73312329-73312348 | None:intergenic | 45.0% | |
| CCATCTGAGAAGTCATCTTC+TGG | - | chr4_1:73312326-73312345 | Msa0570910:exon | 45.0% | |
| !! | CGTCATTTTAGATCCGTCAC+TGG | + | chr4_1:73312495-73312514 | None:intergenic | 45.0% |
| !!! | TGGTAGCTTGCTTTTCTTCG+AGG | - | chr4_1:73312589-73312608 | Msa0570910:intron | 45.0% |
| TTAGGGAAGGATTTGTGGAC+AGG | - | chr4_1:73312651-73312670 | Msa0570910:intron | 45.0% | |
| GAAGGATTTGTGGACAGGTT+AGG | - | chr4_1:73312656-73312675 | Msa0570910:intron | 45.0% | |
| TTCAAGCTTATCCTGGAGCA+AGG | - | chr4_1:73312702-73312721 | Msa0570910:intron | 45.0% | |
| TCAAGCTTATCCTGGAGCAA+GGG | - | chr4_1:73312703-73312722 | Msa0570910:intron | 45.0% | |
| TGCAGTGCCCATAATAAGGT+AGG | + | chr4_1:73312763-73312782 | None:intergenic | 45.0% | |
| GAAGTGCAGTGCCCATAATA+AGG | + | chr4_1:73312767-73312786 | None:intergenic | 45.0% | |
| CTCAAACCCTGACCTATCTA+TGG | - | chr4_1:73313075-73313094 | Msa0570910:intron | 45.0% | |
| ATTGCCGCGATTGTTTATGC+TGG | - | chr4_1:73313148-73313167 | Msa0570910:intron | 45.0% | |
| TCAAATGAGGGAGCTGGAAT+TGG | - | chr4_1:73313502-73313521 | Msa0570910:CDS | 45.0% | |
| AAGTACTTCGCAGAGCTCAA+AGG | - | chr4_1:73313525-73313544 | Msa0570910:CDS | 45.0% | |
| ATGGATCCTGTCGTGATATC+TGG | - | chr4_1:73313661-73313680 | Msa0570910:intron | 45.0% | |
| TTGGATCCAGATATCACGAC+AGG | + | chr4_1:73313670-73313689 | None:intergenic | 45.0% | |
| GGGCTGATATGATTGCCTTA+CGG | - | chr4_1:73313695-73313714 | Msa0570910:intron | 45.0% | |
| GGCTGATATGATTGCCTTAC+GGG | - | chr4_1:73313696-73313715 | Msa0570910:intron | 45.0% | |
| CGCAAGCATATCACCAGTTT+AGG | - | chr4_1:73313794-73313813 | Msa0570910:intron | 45.0% | |
| AGCATATCACCAGTTTAGGG+AGG | - | chr4_1:73313798-73313817 | Msa0570910:intron | 45.0% | |
| ! | CTGATGATGAGTTTGTGGCT+AGG | - | chr4_1:73314449-73314468 | Msa0570910:intron | 45.0% |
| TGATATCATGGCTGAGCCAA+AGG | - | chr4_1:73314893-73314912 | Msa0570910:CDS | 45.0% | |
| TGAGCCAAAGGAAGGTCATA+CGG | - | chr4_1:73314905-73314924 | Msa0570910:CDS | 45.0% | |
| !! | GCAGTATGAACTTGCTGGAA+AGG | - | chr4_1:73314995-73315014 | Msa0570910:CDS | 45.0% |
| !! | TGAATTTGTTGCAGTCCCGA+TGG | - | chr4_1:73315245-73315264 | Msa0570910:CDS | 45.0% |
| CTGTTTGATCTGCCAAAGCT+AGG | - | chr4_1:73315436-73315455 | Msa0570910:CDS | 45.0% | |
| GAAGCCATGGACTTTATTCC+TGG | - | chr4_1:73315624-73315643 | Msa0570910:intron | 45.0% | |
| CCATCAGCAACTACTGTTAC+TGG | + | chr4_1:73315693-73315712 | None:intergenic | 45.0% | |
| CCAGTAACAGTAGTTGCTGA+TGG | - | chr4_1:73315690-73315709 | Msa0570910:intron | 45.0% | |
| ! | ACCCCTACTGTCTGAAGTTA+AGG | - | chr4_1:73315731-73315750 | Msa0570910:CDS | 45.0% |
| GCCTTAACTTCAGACAGTAG+GGG | + | chr4_1:73315735-73315754 | None:intergenic | 45.0% | |
| CTGCCTTAACTTCAGACAGT+AGG | + | chr4_1:73315737-73315756 | None:intergenic | 45.0% | |
| ! | CTTGAACCGGAATTTTCTGC+CGG | - | chr4_1:73315771-73315790 | Msa0570910:CDS | 45.0% |
| CTGCCGGTAACAAATTCATG+TGG | - | chr4_1:73315787-73315806 | Msa0570910:CDS | 45.0% | |
| TTCAAACTGAAAGAGAGGGG+GGG | + | chr4_1:73315853-73315872 | None:intergenic | 45.0% | |
| CTCTAAGCTGGGACAAATCT+AGG | + | chr4_1:73316005-73316024 | None:intergenic | 45.0% | |
| !! | TAAGGGATGAGCTCTAAGCT+GGG | + | chr4_1:73316016-73316035 | None:intergenic | 45.0% |
| !! | ATAAGGGATGAGCTCTAAGC+TGG | + | chr4_1:73316017-73316036 | None:intergenic | 45.0% |
| TGCTTGCTTTCTTGGTGGAA+AGG | - | chr4_1:73316081-73316100 | Msa0570910:CDS | 45.0% | |
| GCTTTCTTGGTGGAAAGGAT+TGG | - | chr4_1:73316086-73316105 | Msa0570910:CDS | 45.0% | |
| !!! | TTTTTTATAATGATTTTATT+TGG | - | chr4_1:73312446-73312465 | Msa0570910:intron | 5.0% |
| !! | TATATTTAACAAATATAATA+AGG | + | chr4_1:73313039-73313058 | None:intergenic | 5.0% |
| TACTCTCCCCCTTAGTCTCA+TGG | - | chr4_1:73312077-73312096 | Msa0570910:three_prime_UTR | 50.0% | |
| ATCCCCAGCCATGAGACTAA+GGG | + | chr4_1:73312088-73312107 | None:intergenic | 50.0% | |
| CAGGCCAGCATAAACAATCG+CGG | + | chr4_1:73313155-73313174 | None:intergenic | 50.0% | |
| !! | GAATCACAGCTGTTGATGGC+CGG | - | chr4_1:73313382-73313401 | Msa0570910:CDS | 50.0% |
| TACTTCGCAGAGCTCAAAGG+TGG | - | chr4_1:73313528-73313547 | Msa0570910:CDS | 50.0% | |
| ! | AATGATCTCTGCGAAGCACC+AGG | - | chr4_1:73313762-73313781 | Msa0570910:intron | 50.0% |
| TGAGCTGGACCTGTTTGACA+AGG | - | chr4_1:73313822-73313841 | Msa0570910:intron | 50.0% | |
| TGACTAAGGCTGACATGCGT+GGG | + | chr4_1:73314045-73314064 | None:intergenic | 50.0% | |
| ATGACTAAGGCTGACATGCG+TGG | + | chr4_1:73314046-73314065 | None:intergenic | 50.0% | |
| GATGGTAGAGATCAAGGCCA+TGG | - | chr4_1:73314867-73314886 | Msa0570910:CDS | 50.0% | |
| ATCATGGCTGAGCCAAAGGA+AGG | - | chr4_1:73314897-73314916 | Msa0570910:CDS | 50.0% | |
| GAGCCAAAGGAAGGTCATAC+GGG | - | chr4_1:73314906-73314925 | Msa0570910:CDS | 50.0% | |
| ATGCCCGTATGACCTTCCTT+TGG | + | chr4_1:73314912-73314931 | None:intergenic | 50.0% | |
| ! | AGTAAGGAGAAGCGTGTGAC+AGG | - | chr4_1:73315146-73315165 | Msa0570910:CDS | 50.0% |
| ! | ATTTGTTGCAGTCCCGATGG+TGG | - | chr4_1:73315248-73315267 | Msa0570910:CDS | 50.0% |
| !! | TCTGGTACTGGTACCACCAT+CGG | + | chr4_1:73315264-73315283 | None:intergenic | 50.0% |
| GGTGGTACCAGTACCAGAAT+AGG | - | chr4_1:73315266-73315285 | Msa0570910:CDS | 50.0% | |
| CAAAGGGCCTATTCTGGTAC+TGG | + | chr4_1:73315276-73315295 | None:intergenic | 50.0% | |
| !! | TTTTCGGGGTAGCCTAGCTT+TGG | + | chr4_1:73315451-73315470 | None:intergenic | 50.0% |
| AGGGCCAGGAATAAAGTCCA+TGG | + | chr4_1:73315631-73315650 | None:intergenic | 50.0% | |
| TCAAACTGAAAGAGAGGGGG+GGG | + | chr4_1:73315852-73315871 | None:intergenic | 50.0% | |
| GGAGATGCTTGCTTTCTTGG+TGG | - | chr4_1:73316076-73316095 | Msa0570910:CDS | 50.0% | |
| GAGACTAAGGGGGAGAGTAG+CGG | + | chr4_1:73312076-73312095 | None:intergenic | 55.0% | |
| TCCCCCTTAGTCTCATGGCT+GGG | - | chr4_1:73312082-73312101 | Msa0570910:three_prime_UTR | 55.0% | |
| TCCCCAGCCATGAGACTAAG+GGG | + | chr4_1:73312087-73312106 | None:intergenic | 55.0% | |
| CATCCCCAGCCATGAGACTA+AGG | + | chr4_1:73312089-73312108 | None:intergenic | 55.0% | |
| ATCCTGGAGCAAGGGTAGCA+AGG | - | chr4_1:73312711-73312730 | Msa0570910:intron | 55.0% | |
| ! | GGTAGTTTCTTTGGGGAGGG+TGG | + | chr4_1:73313193-73313212 | None:intergenic | 55.0% |
| CTTGTCGAGATCGTCCCGTA+AGG | + | chr4_1:73313713-73313732 | None:intergenic | 55.0% | |
| CGGGACGATCTCGACAAGAA+CGG | - | chr4_1:73313715-73313734 | Msa0570910:intron | 55.0% | |
| CCAGCTCATCCTCCCTAAAC+TGG | + | chr4_1:73313810-73313829 | None:intergenic | 55.0% | |
| CCAGTTTAGGGAGGATGAGC+TGG | - | chr4_1:73313807-73313826 | Msa0570910:intron | 55.0% | |
| GACTAAGGCTGACATGCGTG+GGG | + | chr4_1:73314044-73314063 | None:intergenic | 55.0% | |
| GGCATGCTTCTCAGCATCTC+TGG | + | chr4_1:73314790-73314809 | None:intergenic | 55.0% | |
| AGGGCGCAGTATGAACTTGC+TGG | - | chr4_1:73314990-73315009 | Msa0570910:CDS | 55.0% | |
| !! | GAACTTGCTGGAAAGGCTGC+TGG | - | chr4_1:73315002-73315021 | Msa0570910:CDS | 55.0% |
| !! | CTGGTACTGGTACCACCATC+GGG | + | chr4_1:73315263-73315282 | None:intergenic | 55.0% |
| AAACTGAAAGAGAGGGGGGG+GGG | + | chr4_1:73315850-73315869 | None:intergenic | 55.0% | |
| CAAACTGAAAGAGAGGGGGG+GGG | + | chr4_1:73315851-73315870 | None:intergenic | 55.0% | |
| AAGGGGGAGAGTAGCGGTTG+CGG | + | chr4_1:73312070-73312089 | None:intergenic | 60.0% | |
| CTCCCCCTTAGTCTCATGGC+TGG | - | chr4_1:73312081-73312100 | Msa0570910:three_prime_UTR | 60.0% | |
| CCCCAGCCATGAGACTAAGG+GGG | + | chr4_1:73312086-73312105 | None:intergenic | 60.0% | |
| CCCCCTTAGTCTCATGGCTG+GGG | - | chr4_1:73312083-73312102 | Msa0570910:three_prime_UTR | 60.0% | |
| CACCTTGCTACCCTTGCTCC+AGG | + | chr4_1:73312716-73312735 | None:intergenic | 60.0% | |
| AGACTGGAATGCACCGCAGC+CGG | + | chr4_1:73313404-73313423 | None:intergenic | 60.0% | |
| ! | TGCGAAGCACCAGGAAGCTC+AGG | - | chr4_1:73313771-73313790 | Msa0570910:intron | 60.0% |
| ATGCTTGCGCCTGAGCTTCC+TGG | + | chr4_1:73313783-73313802 | None:intergenic | 60.0% | |
| AACTGAAAGAGAGGGGGGGG+GGG | + | chr4_1:73315849-73315868 | None:intergenic | 60.0% | |
| !! | CAGCTGTTGATGGCCGGCTG+CGG | - | chr4_1:73313388-73313407 | Msa0570910:CDS | 65.0% |
| ! | GGGGGAAGCCGGAAAGGCAT+AGG | + | chr4_1:73315824-73315843 | None:intergenic | 65.0% |
| ACTGAAAGAGAGGGGGGGGG+GGG | + | chr4_1:73315848-73315867 | None:intergenic | 65.0% | |
| GGGGAGAGTAGCGGTTGCGG+CGG | + | chr4_1:73312067-73312086 | None:intergenic | 70.0% | |
| TGAAAGAGAGGGGGGGGGGG+GGG | + | chr4_1:73315846-73315865 | None:intergenic | 70.0% | |
| CTGAAAGAGAGGGGGGGGGG+GGG | + | chr4_1:73315847-73315866 | None:intergenic | 70.0% | |
| AAAGAGAGGGGGGGGGGGGG+GGG | + | chr4_1:73315844-73315863 | None:intergenic | 75.0% | |
| GAAAGAGAGGGGGGGGGGGG+GGG | + | chr4_1:73315845-73315864 | None:intergenic | 75.0% | |
| ! | GGGGGGGGGGGAAGCCGGAA+AGG | + | chr4_1:73315830-73315849 | None:intergenic | 80.0% |
| ! | AAGAGAGGGGGGGGGGGGGG+GGG | + | chr4_1:73315843-73315862 | None:intergenic | 80.0% |
| ! | AGAGAGGGGGGGGGGGGGGG+GGG | + | chr4_1:73315842-73315861 | None:intergenic | 85.0% |
| ! | GGGGGGGGGGGGGGGGAAGC+CGG | + | chr4_1:73315835-73315854 | None:intergenic | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 73311958 | 73316416 | 73311958 | ID=Msa0570910;Name=Msa0570910 |
| chr4_1 | mRNA | 73311958 | 73316416 | 73311958 | ID=Msa0570910-mRNA-1;Parent=Msa0570910;Name=Msa0570910-mRNA-1;_AED=0.06;_eAED=0.06;_QI=138|0.35|0.2|1|0.35|0.2|15|378|600 |
| chr4_1 | exon | 73311958 | 73312404 | 73311958 | ID=Msa0570910-mRNA-1:exon:25159;Parent=Msa0570910-mRNA-1 |
| chr4_1 | exon | 73313108 | 73313115 | 73313108 | ID=Msa0570910-mRNA-1:exon:25158;Parent=Msa0570910-mRNA-1 |
| chr4_1 | exon | 73313207 | 73313455 | 73313207 | ID=Msa0570910-mRNA-1:exon:25157;Parent=Msa0570910-mRNA-1 |
| chr4_1 | exon | 73313486 | 73313636 | 73313486 | ID=Msa0570910-mRNA-1:exon:25156;Parent=Msa0570910-mRNA-1 |
| chr4_1 | exon | 73314486 | 73314613 | 73314486 | ID=Msa0570910-mRNA-1:exon:25155;Parent=Msa0570910-mRNA-1 |
| chr4_1 | exon | 73314638 | 73314827 | 73314638 | ID=Msa0570910-mRNA-1:exon:25154;Parent=Msa0570910-mRNA-1 |
| chr4_1 | exon | 73314848 | 73314926 | 73314848 | ID=Msa0570910-mRNA-1:exon:25153;Parent=Msa0570910-mRNA-1 |
| chr4_1 | exon | 73314955 | 73315066 | 73314955 | ID=Msa0570910-mRNA-1:exon:25152;Parent=Msa0570910-mRNA-1 |
| chr4_1 | exon | 73315085 | 73315308 | 73315085 | ID=Msa0570910-mRNA-1:exon:25151;Parent=Msa0570910-mRNA-1 |
| chr4_1 | exon | 73315400 | 73315558 | 73315400 | ID=Msa0570910-mRNA-1:exon:25150;Parent=Msa0570910-mRNA-1 |
| chr4_1 | exon | 73315642 | 73315701 | 73315642 | ID=Msa0570910-mRNA-1:exon:25149;Parent=Msa0570910-mRNA-1 |
| chr4_1 | exon | 73315710 | 73315723 | 73315710 | ID=Msa0570910-mRNA-1:exon:25148;Parent=Msa0570910-mRNA-1 |
| chr4_1 | exon | 73315731 | 73315896 | 73315731 | ID=Msa0570910-mRNA-1:exon:25147;Parent=Msa0570910-mRNA-1 |
| chr4_1 | exon | 73315999 | 73316161 | 73315999 | ID=Msa0570910-mRNA-1:exon:25146;Parent=Msa0570910-mRNA-1 |
| chr4_1 | exon | 73316248 | 73316416 | 73316248 | ID=Msa0570910-mRNA-1:exon:25145;Parent=Msa0570910-mRNA-1 |
| chr4_1 | five_prime_UTR | 73316279 | 73316416 | 73316279 | ID=Msa0570910-mRNA-1:five_prime_utr;Parent=Msa0570910-mRNA-1 |
| chr4_1 | CDS | 73316248 | 73316278 | 73316248 | ID=Msa0570910-mRNA-1:cds;Parent=Msa0570910-mRNA-1 |
| chr4_1 | CDS | 73315999 | 73316161 | 73315999 | ID=Msa0570910-mRNA-1:cds;Parent=Msa0570910-mRNA-1 |
| chr4_1 | CDS | 73315731 | 73315896 | 73315731 | ID=Msa0570910-mRNA-1:cds;Parent=Msa0570910-mRNA-1 |
| chr4_1 | CDS | 73315710 | 73315723 | 73315710 | ID=Msa0570910-mRNA-1:cds;Parent=Msa0570910-mRNA-1 |
| chr4_1 | CDS | 73315642 | 73315701 | 73315642 | ID=Msa0570910-mRNA-1:cds;Parent=Msa0570910-mRNA-1 |
| chr4_1 | CDS | 73315400 | 73315558 | 73315400 | ID=Msa0570910-mRNA-1:cds;Parent=Msa0570910-mRNA-1 |
| chr4_1 | CDS | 73315085 | 73315308 | 73315085 | ID=Msa0570910-mRNA-1:cds;Parent=Msa0570910-mRNA-1 |
| chr4_1 | CDS | 73314955 | 73315066 | 73314955 | ID=Msa0570910-mRNA-1:cds;Parent=Msa0570910-mRNA-1 |
| chr4_1 | CDS | 73314848 | 73314926 | 73314848 | ID=Msa0570910-mRNA-1:cds;Parent=Msa0570910-mRNA-1 |
| chr4_1 | CDS | 73314638 | 73314827 | 73314638 | ID=Msa0570910-mRNA-1:cds;Parent=Msa0570910-mRNA-1 |
| chr4_1 | CDS | 73314486 | 73314613 | 73314486 | ID=Msa0570910-mRNA-1:cds;Parent=Msa0570910-mRNA-1 |
| chr4_1 | CDS | 73313486 | 73313636 | 73313486 | ID=Msa0570910-mRNA-1:cds;Parent=Msa0570910-mRNA-1 |
| chr4_1 | CDS | 73313207 | 73313455 | 73313207 | ID=Msa0570910-mRNA-1:cds;Parent=Msa0570910-mRNA-1 |
| chr4_1 | CDS | 73313108 | 73313115 | 73313108 | ID=Msa0570910-mRNA-1:cds;Parent=Msa0570910-mRNA-1 |
| chr4_1 | CDS | 73312336 | 73312404 | 73312336 | ID=Msa0570910-mRNA-1:cds;Parent=Msa0570910-mRNA-1 |
| chr4_1 | three_prime_UTR | 73311958 | 73312335 | 73311958 | ID=Msa0570910-mRNA-1:three_prime_utr;Parent=Msa0570910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
