Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0576200 | XP_024629522.1 | 89.255 | 819 | 23 | 4 | 1 | 819 | 1 | 754 | 0.0 | 1487 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0576200 | sp|Q9LMT2|PAPS1_ARATH | 56.654 | 819 | 225 | 16 | 15 | 817 | 9 | 713 | 0.0 | 854 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0576200 | G7LCF5 | 89.255 | 819 | 23 | 4 | 1 | 819 | 1 | 754 | 0.0 | 1487 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0331920 | Msa0576200 | 0.810161 | 1.322789e-50 | -8.615850e-47 |
| Msa0576200 | Msa0607540 | 0.826309 | 2.911696e-54 | -8.615850e-47 |
| Msa0576200 | Msa0776030 | 0.810380 | 1.186250e-50 | -8.615850e-47 |
| Msa0576200 | Msa0876850 | -0.811750 | 5.987960e-51 | -8.615850e-47 |
| Msa0576200 | Msa0886330 | -0.805178 | 1.512969e-49 | -8.615850e-47 |
| Msa0576200 | Msa0927290 | 0.818058 | 2.389233e-52 | -8.615850e-47 |
| Msa0576200 | Msa0930230 | 0.907956 | 2.889635e-81 | -8.615850e-47 |
| Msa0576200 | Msa1241130 | -0.803580 | 3.257297e-49 | -8.615850e-47 |
| Msa0576200 | Msa1261250 | 0.801695 | 7.976208e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0576200 | MtrunA17_Chr8g0392531 | 89.255 | 819 | 23 | 4 | 1 | 819 | 1 | 754 | 0.0 | 1487 |
| Msa0576200 | MtrunA17_Chr6g0483461 | 66.910 | 822 | 199 | 8 | 1 | 819 | 1 | 752 | 0.0 | 1099 |
| Msa0576200 | MtrunA17_Chr8g0340751 | 56.552 | 580 | 197 | 5 | 15 | 592 | 24 | 550 | 0.0 | 688 |
| Msa0576200 | MtrunA17_Chr3g0140561 | 59.404 | 537 | 170 | 4 | 19 | 553 | 26 | 516 | 0.0 | 686 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0576200 | AT1G17980.1 | 56.654 | 819 | 225 | 16 | 15 | 817 | 9 | 713 | 0.0 | 854 |
| Msa0576200 | AT4G32850.6 | 60.878 | 524 | 158 | 3 | 18 | 540 | 22 | 499 | 0.0 | 684 |
| Msa0576200 | AT4G32850.9 | 60.878 | 524 | 158 | 3 | 18 | 540 | 22 | 499 | 0.0 | 684 |
| Msa0576200 | AT4G32850.2 | 60.878 | 524 | 158 | 3 | 18 | 540 | 22 | 499 | 0.0 | 684 |
| Msa0576200 | AT4G32850.5 | 60.878 | 524 | 158 | 3 | 18 | 540 | 22 | 499 | 0.0 | 684 |
| Msa0576200 | AT4G32850.3 | 60.878 | 524 | 158 | 3 | 18 | 540 | 22 | 499 | 0.0 | 683 |
| Msa0576200 | AT4G32850.1 | 60.878 | 524 | 158 | 3 | 18 | 540 | 22 | 499 | 0.0 | 683 |
| Msa0576200 | AT4G32850.10 | 60.878 | 524 | 158 | 3 | 18 | 540 | 22 | 499 | 0.0 | 683 |
| Msa0576200 | AT4G32850.8 | 60.878 | 524 | 158 | 3 | 18 | 540 | 22 | 499 | 0.0 | 682 |
| Msa0576200 | AT4G32850.13 | 60.878 | 524 | 158 | 3 | 18 | 540 | 22 | 499 | 0.0 | 682 |
| Msa0576200 | AT4G32850.15 | 60.878 | 524 | 158 | 3 | 18 | 540 | 22 | 499 | 0.0 | 682 |
| Msa0576200 | AT4G32850.16 | 60.878 | 524 | 158 | 3 | 18 | 540 | 22 | 499 | 0.0 | 682 |
| Msa0576200 | AT4G32850.4 | 60.878 | 524 | 158 | 3 | 18 | 540 | 22 | 499 | 0.0 | 682 |
| Msa0576200 | AT4G32850.17 | 60.878 | 524 | 158 | 3 | 18 | 540 | 22 | 499 | 0.0 | 682 |
| Msa0576200 | AT4G32850.14 | 60.878 | 524 | 158 | 3 | 18 | 540 | 22 | 499 | 0.0 | 682 |
| Msa0576200 | AT4G32850.12 | 60.878 | 524 | 158 | 3 | 18 | 540 | 22 | 499 | 0.0 | 682 |
| Msa0576200 | AT4G32850.11 | 60.878 | 524 | 158 | 3 | 18 | 540 | 22 | 499 | 0.0 | 682 |
| Msa0576200 | AT4G32850.7 | 60.878 | 524 | 158 | 3 | 18 | 540 | 22 | 499 | 0.0 | 681 |
| Msa0576200 | AT2G25850.4 | 59.160 | 524 | 167 | 3 | 18 | 540 | 24 | 501 | 0.0 | 671 |
| Msa0576200 | AT2G25850.3 | 59.160 | 524 | 167 | 3 | 18 | 540 | 24 | 501 | 0.0 | 670 |
| Msa0576200 | AT2G25850.1 | 59.160 | 524 | 167 | 3 | 18 | 540 | 24 | 501 | 0.0 | 670 |
| Msa0576200 | AT2G25850.2 | 59.160 | 524 | 167 | 3 | 18 | 540 | 24 | 501 | 0.0 | 669 |
| Msa0576200 | AT2G25850.9 | 59.160 | 524 | 167 | 3 | 18 | 540 | 24 | 501 | 0.0 | 668 |
| Msa0576200 | AT2G25850.6 | 59.160 | 524 | 167 | 3 | 18 | 540 | 24 | 501 | 0.0 | 668 |
| Msa0576200 | AT2G25850.7 | 59.160 | 524 | 167 | 3 | 18 | 540 | 24 | 501 | 0.0 | 668 |
| Msa0576200 | AT2G25850.8 | 59.160 | 524 | 167 | 3 | 18 | 540 | 24 | 501 | 0.0 | 668 |
| Msa0576200 | AT2G25850.5 | 59.160 | 524 | 167 | 3 | 18 | 540 | 24 | 501 | 0.0 | 668 |
| Msa0576200 | AT1G17980.2 | 53.429 | 700 | 196 | 16 | 134 | 817 | 1 | 586 | 0.0 | 657 |
| Msa0576200 | AT3G06560.1 | 34.899 | 447 | 230 | 7 | 39 | 484 | 21 | 407 | 5.22e-77 | 259 |
Find 242 sgRNAs with CRISPR-Local
Find 451 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAATTATCACACCTTTC+TGG | 0.144956 | 4_1:-80269362 | None:intergenic |
| TCTTTGTCTACCTGAATATT+TGG | 0.161580 | 4_1:-80269870 | None:intergenic |
| CAAACTGTTCGCAGTCTTAA+TGG | 0.187355 | 4_1:+80269813 | Msa0576200:CDS |
| CAGTAATGCTTTGTGCTATT+AGG | 0.199866 | 4_1:+80270293 | Msa0576200:CDS |
| AGAAATAAAGTCAAAGATTT+TGG | 0.214683 | 4_1:+80272454 | Msa0576200:CDS |
| CGTTCAGAGCTTAGGGTTTC+CGG | 0.219101 | 4_1:+80271974 | Msa0576200:CDS |
| ATACTCAAAGTTTATACTTT+TGG | 0.237895 | 4_1:+80267985 | Msa0576200:five_prime_UTR |
| TGTTGGTGTCTCGATTCTTT+AGG | 0.240500 | 4_1:+80270242 | Msa0576200:CDS |
| GATCTCTTGGACTTCAAGTT+TGG | 0.256862 | 4_1:+80270320 | Msa0576200:CDS |
| AGTTTACTCTCCTCTTGTTT+TGG | 0.270084 | 4_1:+80267612 | Msa0576200:five_prime_UTR |
| TGAGTTAGGTTGTGAAGATT+TGG | 0.275953 | 4_1:+80268888 | Msa0576200:intron |
| TTATCCTTGGGATTTCTTCT+AGG | 0.277232 | 4_1:-80270346 | None:intergenic |
| CTAATAGCACAAAGCATTAC+TGG | 0.280032 | 4_1:-80270292 | None:intergenic |
| CAGGTTGAATTTCACCTCCT+TGG | 0.283830 | 4_1:+80273803 | Msa0576200:intron |
| TTTACACTGTTCTTACTTCA+TGG | 0.285582 | 4_1:+80271730 | Msa0576200:CDS |
| CAAGTTCAATGGCATCTCTT+TGG | 0.287754 | 4_1:+80269560 | Msa0576200:CDS |
| ATCAAATTGTCCGCCTTCTT+TGG | 0.290734 | 4_1:-80271780 | None:intergenic |
| GTTGGTGTCTCGATTCTTTA+GGG | 0.291373 | 4_1:+80270243 | Msa0576200:CDS |
| TTGTATTTCCCGGTGGTATT+CGG | 0.297511 | 4_1:+80271912 | Msa0576200:CDS |
| AGTAATGCTTTGTGCTATTA+GGG | 0.297888 | 4_1:+80270294 | Msa0576200:CDS |
| TCAACTCATATATACTCTAA+TGG | 0.298407 | 4_1:+80272562 | Msa0576200:CDS |
| CATTGAGATGCGTGAAGTTA+TGG | 0.304250 | 4_1:+80269982 | Msa0576200:CDS |
| GAACTTGGCAAACATCAATT+TGG | 0.304572 | 4_1:+80272480 | Msa0576200:CDS |
| GCATTTGGTTCCAAATATTC+AGG | 0.305575 | 4_1:+80269860 | Msa0576200:CDS |
| AGGTTGAATTTCACCTCCTT+GGG | 0.315222 | 4_1:+80273804 | Msa0576200:intron |
| TCAAGCTCCTCAGGTTCTTC+AGG | 0.319284 | 4_1:-80272415 | None:intergenic |
| GACTGATCAAATCTTGCATT+TGG | 0.327355 | 4_1:+80269845 | Msa0576200:CDS |
| TGGCTTTAGGAAGATTTCTT+TGG | 0.334957 | 4_1:+80269453 | Msa0576200:intron |
| GGGTTAAGCAACCGCGATAT+CGG | 0.339175 | 4_1:+80268249 | Msa0576200:CDS |
| GGGTGCAACTCTGTCACTTC+TGG | 0.341852 | 4_1:-80269504 | None:intergenic |
| AATCGAGACACCAACATATT+AGG | 0.341938 | 4_1:-80270235 | None:intergenic |
| ATGTTGATGATCTTAGAAAT+TGG | 0.345409 | 4_1:+80271431 | Msa0576200:CDS |
| CAACTCATATATACTCTAAT+GGG | 0.349594 | 4_1:+80272563 | Msa0576200:CDS |
| CGCCGGCTTGTATGAGAATC+AGG | 0.350425 | 4_1:+80268470 | Msa0576200:CDS |
| ATCTCTTGGACTTCAAGTTT+GGG | 0.350438 | 4_1:+80270321 | Msa0576200:CDS |
| CTCACCCAGGTTACTTTGGA+TGG | 0.351923 | 4_1:-80271944 | None:intergenic |
| ATATGTCACGGGCAGGTTGC+AGG | 0.353400 | 4_1:+80270145 | Msa0576200:intron |
| TTTATGCACAATTATCTTTG+TGG | 0.356533 | 4_1:+80269589 | Msa0576200:CDS |
| TTCCGCTGTGGCACTGGTGC+TGG | 0.359270 | 4_1:-80273625 | None:intergenic |
| ATCTTAGAAATTGGAAAGGC+TGG | 0.364295 | 4_1:+80271440 | Msa0576200:CDS |
| GTTACTTTGGATGGGCATTT+AGG | 0.364483 | 4_1:-80271935 | None:intergenic |
| GAGTTAGGTTGTGAAGATTT+GGG | 0.370783 | 4_1:+80268889 | Msa0576200:intron |
| GATTGTGCGTGCAGTAATAA+TGG | 0.372047 | 4_1:-80268019 | None:intergenic |
| CCTCTCTGCCTCCCTCTAGC+AGG | 0.372633 | 4_1:+80272110 | Msa0576200:CDS |
| TAAACTTTGAGTATAAAGTA+TGG | 0.373416 | 4_1:-80267976 | None:intergenic |
| GGATAAGCAGGAGTAATTAT+TGG | 0.374734 | 4_1:-80270382 | None:intergenic |
| CTTTGTCAAATCTGCGCATA+TGG | 0.376017 | 4_1:+80272746 | Msa0576200:CDS |
| TATCAACGTTCTTGCAAATC+AGG | 0.378158 | 4_1:-80273928 | None:intergenic |
| GCACAAAGCATTACTGGGTT+TGG | 0.381859 | 4_1:-80270286 | None:intergenic |
| CATTAGATGGTATTTATCCT+TGG | 0.381933 | 4_1:-80270359 | None:intergenic |
| AACATATTAGGCAGTGCATT+TGG | 0.383440 | 4_1:-80270223 | None:intergenic |
| AAAGTGTAGTAATTTGTTGA+TGG | 0.390151 | 4_1:+80268218 | Msa0576200:exon |
| ATTAGATGGTATTTATCCTT+GGG | 0.393020 | 4_1:-80270358 | None:intergenic |
| TTTCAGGGGAGTGTCCTTCT+GGG | 0.394299 | 4_1:+80272248 | Msa0576200:CDS |
| ATCGGGCAGCGCCAAAGGTT+AGG | 0.397193 | 4_1:+80268267 | Msa0576200:CDS |
| AATTGTCCGCCTTCTTTGGC+AGG | 0.398728 | 4_1:-80271776 | None:intergenic |
| AGAATAAAGACGCACCTAGA+AGG | 0.407611 | 4_1:+80267540 | None:intergenic |
| AGTTGGGAGCAAACAATGAT+AGG | 0.410690 | 4_1:+80272032 | Msa0576200:CDS |
| GAGATGGATATATTCATTCC+AGG | 0.411288 | 4_1:-80271860 | None:intergenic |
| TTATGCACAATTATCTTTGT+GGG | 0.411391 | 4_1:+80269590 | Msa0576200:CDS |
| ATTGAGATGCGTGAAGTTAT+GGG | 0.413969 | 4_1:+80269983 | Msa0576200:CDS |
| GAGTAATTATTGGCATTAGA+TGG | 0.414055 | 4_1:-80270372 | None:intergenic |
| TGGAGGTTAACAAGGCTGAT+TGG | 0.416707 | 4_1:+80271335 | Msa0576200:CDS |
| GTAAGCGACGTTCAGAGCTT+AGG | 0.418314 | 4_1:+80271966 | Msa0576200:CDS |
| ATTGTGCGTGCAGTAATAAT+GGG | 0.419514 | 4_1:-80268018 | None:intergenic |
| CTTGCGCCAGTTGACATTGA+AGG | 0.420649 | 4_1:+80271474 | Msa0576200:CDS |
| GGAGGTTAACAAGGCTGATT+GGG | 0.424577 | 4_1:+80271336 | Msa0576200:CDS |
| ATTATGGTTTACCTAATAAG+AGG | 0.426995 | 4_1:-80273649 | None:intergenic |
| CTTACTCACCCAGGTTACTT+TGG | 0.427213 | 4_1:-80271948 | None:intergenic |
| TAAGCGACGTTCAGAGCTTA+GGG | 0.433261 | 4_1:+80271967 | Msa0576200:CDS |
| TAGATTGAGAGGAACACTTA+TGG | 0.435165 | 4_1:+80271656 | Msa0576200:intron |
| AGAGGGAGGCAGAGAGGAAA+AGG | 0.440261 | 4_1:-80272104 | None:intergenic |
| ACAAAGATAATTGTGCATAA+AGG | 0.440809 | 4_1:-80269587 | None:intergenic |
| AAAGGGTATTTGCATTGCAT+TGG | 0.442296 | 4_1:+80267565 | Msa0576200:five_prime_UTR |
| ATGGACCACACACAATCTTC+TGG | 0.443788 | 4_1:-80272372 | None:intergenic |
| ACCTTTCTGGTTGCATGTCT+AGG | 0.447295 | 4_1:-80269349 | None:intergenic |
| GCTCGGTTATCCCTAACCTT+TGG | 0.448475 | 4_1:-80268278 | None:intergenic |
| ACGACTGGGGCAACAAGGAC+CGG | 0.449021 | 4_1:-80271167 | None:intergenic |
| AGCTTTATCTGCTGAAGCTA+GGG | 0.449201 | 4_1:+80273861 | Msa0576200:three_prime_UTR |
| AATTTGTTGATGGGGAGCAC+TGG | 0.449994 | 4_1:+80268228 | Msa0576200:exon |
| AGACGCACCTAGAAGGGAAA+AGG | 0.450215 | 4_1:+80267547 | Msa0576200:five_prime_UTR |
| ATACCCGCCTTTGTATTTCC+CGG | 0.451817 | 4_1:+80271902 | Msa0576200:CDS |
| CACAGCGGAAGCCTCTTATT+AGG | 0.452711 | 4_1:+80273638 | Msa0576200:CDS |
| CCTCGAATTCCGATGAGAAT+AGG | 0.453630 | 4_1:-80267766 | None:intergenic |
| TATATACCTTCAATGTCAAC+TGG | 0.454373 | 4_1:-80271480 | None:intergenic |
| AGCAGGGATGTTCATGAAGA+TGG | 0.454788 | 4_1:+80272127 | Msa0576200:CDS |
| AGATCATCTTCAAGCTCCTC+AGG | 0.454935 | 4_1:-80272424 | None:intergenic |
| TTACACTGTTCTTACTTCAT+GGG | 0.455282 | 4_1:+80271731 | Msa0576200:CDS |
| GAGCTTAGGGTTTCCGGCCA+TGG | 0.456723 | 4_1:+80271980 | Msa0576200:CDS |
| AATGGAGCTGTAAGCTCAGC+AGG | 0.457568 | 4_1:-80273589 | None:intergenic |
| TTATCACACAGATGCACGAC+TGG | 0.457841 | 4_1:-80271182 | None:intergenic |
| CCTATTCTCATCGGAATTCG+AGG | 0.459561 | 4_1:+80267766 | Msa0576200:five_prime_UTR |
| AAGGAAGCTCGAGCTGTAGA+TGG | 0.460151 | 4_1:+80270038 | Msa0576200:CDS |
| GCTATTAGGGAAGGATCTCT+TGG | 0.461527 | 4_1:+80270307 | Msa0576200:CDS |
| GTAGGGAGGAAGTGCTTGGC+AGG | 0.466400 | 4_1:+80268505 | Msa0576200:CDS |
| ATCAGGATGAAGCGATTTGT+AGG | 0.466429 | 4_1:+80268487 | Msa0576200:CDS |
| GGTTAAGCAACCGCGATATC+GGG | 0.466728 | 4_1:+80268250 | Msa0576200:CDS |
| GGGCAACAAGGACCGGGAGG+TGG | 0.474614 | 4_1:-80271160 | None:intergenic |
| CTTCTCGAGCTCACGCGTCT+TGG | 0.475119 | 4_1:-80268337 | None:intergenic |
| AAATCCCTTTGCACGGCTAA+CGG | 0.475309 | 4_1:-80268918 | None:intergenic |
| AAGTGTAGTAATTTGTTGAT+GGG | 0.475401 | 4_1:+80268219 | Msa0576200:exon |
| ATCACTGGAACATGAGCATC+AGG | 0.477906 | 4_1:-80269531 | None:intergenic |
| GTCTCAAGAGGGTAAAGAGT+TGG | 0.478740 | 4_1:+80272015 | Msa0576200:CDS |
| AAGCTTTATCTGCTGAAGCT+AGG | 0.478923 | 4_1:+80273860 | Msa0576200:three_prime_UTR |
| AAGAACGTCAATATCTGCTC+CGG | 0.479690 | 4_1:-80269317 | None:intergenic |
| GTGATGGGTTTCAAGTTCAA+TGG | 0.481598 | 4_1:+80269549 | Msa0576200:CDS |
| TCGGGCAGCGCCAAAGGTTA+GGG | 0.482263 | 4_1:+80268268 | Msa0576200:CDS |
| GAATTCATGCACGGATAAGC+AGG | 0.482783 | 4_1:-80270394 | None:intergenic |
| TCTCAAGAGGGTAAAGAGTT+GGG | 0.485029 | 4_1:+80272016 | Msa0576200:CDS |
| ATAAACTGGGCATTGCTTGT+TGG | 0.485761 | 4_1:+80270181 | Msa0576200:CDS |
| AGAGGCTTCCGCTGTGGCAC+TGG | 0.486863 | 4_1:-80273631 | None:intergenic |
| GCGTACACGCAATGGAAACC+TGG | 0.488459 | 4_1:+80271842 | Msa0576200:CDS |
| AAAGGGATTTAACGAACAAC+TGG | 0.491052 | 4_1:+80268931 | Msa0576200:CDS |
| CTCTCTGCCTCCCTCTAGCA+GGG | 0.491602 | 4_1:+80272111 | Msa0576200:CDS |
| AAAGCAAGCAGAAGATAGTC+GGG | 0.493024 | 4_1:+80272060 | Msa0576200:CDS |
| CTGCAAATAAGTGAAATTGA+TGG | 0.494788 | 4_1:-80273985 | None:intergenic |
| GAAAGCAAGCAGAAGATAGT+CGG | 0.498683 | 4_1:+80272059 | Msa0576200:CDS |
| AATCAGCATGAAATGATGAA+TGG | 0.499384 | 4_1:-80267850 | None:intergenic |
| CGACTGGGGCAACAAGGACC+GGG | 0.503696 | 4_1:-80271166 | None:intergenic |
| TCTTTAGGGTATACACTCAA+TGG | 0.504290 | 4_1:+80270257 | Msa0576200:CDS |
| GATGCTCATGTTCCAGTGAT+GGG | 0.507414 | 4_1:+80269534 | Msa0576200:CDS |
| CTCCTCAGGTTCTTCAGGAA+AGG | 0.508012 | 4_1:-80272410 | None:intergenic |
| AAATATATATATTCTTAGAA+TGG | 0.509644 | 4_1:-80268153 | None:intergenic |
| TTGAACTTGAAACCCATCAC+TGG | 0.510031 | 4_1:-80269546 | None:intergenic |
| AGGACCGGGAGGTGGTTTGT+AGG | 0.510233 | 4_1:-80271152 | None:intergenic |
| GGAACATGAGCATCAGGCAC+TGG | 0.510601 | 4_1:-80269525 | None:intergenic |
| GAGGCAGAGAGGAAAAGGAC+TGG | 0.513822 | 4_1:-80272099 | None:intergenic |
| AGAACGTCAATATCTGCTCC+GGG | 0.514026 | 4_1:-80269316 | None:intergenic |
| TGATGCTCATGTTCCAGTGA+TGG | 0.514204 | 4_1:+80269533 | Msa0576200:CDS |
| GAATAAAGACGCACCTAGAA+GGG | 0.516025 | 4_1:+80267541 | None:intergenic |
| GCGGCATTTCACATGGGAGA+TGG | 0.519967 | 4_1:-80271876 | None:intergenic |
| ATTTGTTGATGGGGAGCACT+GGG | 0.519969 | 4_1:+80268229 | Msa0576200:exon |
| AATCTTATAAGAATTATTTG+CGG | 0.524889 | 4_1:+80271389 | Msa0576200:CDS |
| CAAGGAGTTCCTGCCAAAGA+AGG | 0.525214 | 4_1:+80271767 | Msa0576200:CDS |
| ATTTGTAGGGAGGAAGTGCT+TGG | 0.525485 | 4_1:+80268501 | Msa0576200:CDS |
| CTTCAGTGTCATCCACATCC+TGG | 0.537994 | 4_1:+80271683 | Msa0576200:CDS |
| AATGCCCATCCAAAGTAACC+TGG | 0.539596 | 4_1:+80271939 | Msa0576200:CDS |
| GCAGTGCATTTGGATATAGC+TGG | 0.539999 | 4_1:-80270213 | None:intergenic |
| TTCAGGGGAGTGTCCTTCTG+GGG | 0.542622 | 4_1:+80272249 | Msa0576200:CDS |
| GCGATATCGGGCAGCGCCAA+AGG | 0.546834 | 4_1:+80268262 | Msa0576200:CDS |
| GTTGGTCCGCTCAATGAGAT+CGG | 0.547111 | 4_1:-80268300 | None:intergenic |
| GCATTTAGGCCGAATACCAC+CGG | 0.548060 | 4_1:-80271921 | None:intergenic |
| AAAACCGTTAGCCGTGCAAA+GGG | 0.548467 | 4_1:+80268914 | Msa0576200:CDS |
| GATATTGACGTTCTTTGTGT+GGG | 0.550757 | 4_1:+80269325 | Msa0576200:CDS |
| TCACCCAGGTTACTTTGGAT+GGG | 0.551473 | 4_1:-80271943 | None:intergenic |
| TCTTAGAAATTGGAAAGGCT+GGG | 0.551903 | 4_1:+80271441 | Msa0576200:CDS |
| CTGTCAATGCGTACACGCAA+TGG | 0.552154 | 4_1:+80271834 | Msa0576200:CDS |
| GACGCACCTAGAAGGGAAAA+GGG | 0.552998 | 4_1:+80267548 | Msa0576200:five_prime_UTR |
| AGATATTGACGTTCTTTGTG+TGG | 0.554128 | 4_1:+80269324 | Msa0576200:CDS |
| CAAAACCGTTAGCCGTGCAA+AGG | 0.554179 | 4_1:+80268913 | Msa0576200:CDS |
| GTATATTGCGGCATTTCACA+TGG | 0.554906 | 4_1:-80271883 | None:intergenic |
| ATGCTTTGTGCTATTAGGGA+AGG | 0.556768 | 4_1:+80270298 | Msa0576200:CDS |
| TTAGGCTATGGAGGTTAACA+AGG | 0.557416 | 4_1:+80271327 | Msa0576200:intron |
| ATGAAGTAAGAACAGTGTAA+AGG | 0.558232 | 4_1:-80271728 | None:intergenic |
| AGGCAGAGAGGAAAAGGACT+GGG | 0.558691 | 4_1:-80272098 | None:intergenic |
| CCACCGGGAAATACAAAGGC+GGG | 0.561685 | 4_1:-80271905 | None:intergenic |
| GTTTAGTACTTGCAAGACGC+CGG | 0.565736 | 4_1:+80268453 | Msa0576200:intron |
| AAGTATTGGCCAACCTCTGA+GGG | 0.566849 | 4_1:-80271233 | None:intergenic |
| TAATAGCACAAAGCATTACT+GGG | 0.568662 | 4_1:-80270291 | None:intergenic |
| ATAGGACTTGGATTTATCAC+AGG | 0.569485 | 4_1:+80269764 | Msa0576200:intron |
| TATCAGTAGCAGCAAGTAGA+GGG | 0.570624 | 4_1:-80272315 | None:intergenic |
| TCAGGATGAAGCGATTTGTA+GGG | 0.571059 | 4_1:+80268488 | Msa0576200:CDS |
| GTTCGTTAAATCCCTTTGCA+CGG | 0.573155 | 4_1:-80268925 | None:intergenic |
| AGTGTAGTAATTTGTTGATG+GGG | 0.573507 | 4_1:+80268220 | Msa0576200:exon |
| GGGTATACACTCAATGGCGT+TGG | 0.578720 | 4_1:+80270263 | Msa0576200:CDS |
| CAAGAACTAGCAATGCTGAC+AGG | 0.579738 | 4_1:-80272154 | None:intergenic |
| TATGACAGAGGAATTTCAGA+GGG | 0.579932 | 4_1:+80270450 | Msa0576200:CDS |
| TATCACACAGATGCACGACT+GGG | 0.581050 | 4_1:-80271181 | None:intergenic |
| CTTTGAACATCTAGATTGAG+AGG | 0.582804 | 4_1:+80271645 | Msa0576200:intron |
| TTTGGCGCTGCCCGATATCG+CGG | 0.584549 | 4_1:-80268260 | None:intergenic |
| TTTACCTACAAACCACCTCC+CGG | 0.584644 | 4_1:+80271148 | Msa0576200:CDS |
| CTATCAGTAGCAGCAAGTAG+AGG | 0.584655 | 4_1:-80272316 | None:intergenic |
| TTGGCGACATCATATTCAGT+TGG | 0.584796 | 4_1:-80268318 | None:intergenic |
| ATCCTGATTCTCATACAAGC+CGG | 0.587558 | 4_1:-80268472 | None:intergenic |
| TCGAGGTTCAACTTCAACAA+CGG | 0.589070 | 4_1:+80267783 | Msa0576200:five_prime_UTR |
| AGTGCTTGGCAGGCTAGACC+AGG | 0.589329 | 4_1:+80268515 | Msa0576200:CDS |
| GAACATGAGCATCAGGCACT+GGG | 0.589802 | 4_1:-80269524 | None:intergenic |
| ACCTAGACATGCAACCAGAA+AGG | 0.590035 | 4_1:+80269348 | Msa0576200:CDS |
| ACGATACAAACCAAAACAAG+AGG | 0.593878 | 4_1:-80267622 | None:intergenic |
| CATCTTCACTTTCACCTCGA+CGG | 0.595413 | 4_1:+80267811 | Msa0576200:five_prime_UTR |
| CAAATCACACCTATTCTCAT+CGG | 0.602577 | 4_1:+80267757 | Msa0576200:five_prime_UTR |
| AAAGTATTGGCCAACCTCTG+AGG | 0.602813 | 4_1:-80271234 | None:intergenic |
| ATGGGTCTGCAACGTAAGCA+AGG | 0.604283 | 4_1:+80271749 | Msa0576200:CDS |
| TTTATCTGCTGAAGCTAGGG+GGG | 0.604732 | 4_1:+80273864 | Msa0576200:three_prime_UTR |
| TGTTTATTCAAATGTATGCA+AGG | 0.605026 | 4_1:+80270019 | Msa0576200:CDS |
| TTCATGAACATCCCTGCTAG+AGG | 0.609618 | 4_1:-80272122 | None:intergenic |
| AAATGCACTGCCTAATATGT+TGG | 0.610636 | 4_1:+80270225 | Msa0576200:CDS |
| AAGTTATGGGCTAAGCGTCG+TGG | 0.611953 | 4_1:+80269996 | Msa0576200:CDS |
| AATACCACCGGGAAATACAA+AGG | 0.616274 | 4_1:-80271909 | None:intergenic |
| TCATGAACATCCCTGCTAGA+GGG | 0.618224 | 4_1:-80272121 | None:intergenic |
| AACTCATATATACTCTAATG+GGG | 0.619528 | 4_1:+80272564 | Msa0576200:CDS |
| CATTTAGGCCGAATACCACC+GGG | 0.619637 | 4_1:-80271920 | None:intergenic |
| ATGCCCATCCAAAGTAACCT+GGG | 0.622591 | 4_1:+80271940 | Msa0576200:CDS |
| AAGGCTTGATGTACCTCACA+TGG | 0.622782 | 4_1:-80272391 | None:intergenic |
| GGTTGAATTTCACCTCCTTG+GGG | 0.623561 | 4_1:+80273805 | Msa0576200:intron |
| CTGAAAGGAACGTGGAGCGG+AGG | 0.624339 | 4_1:-80267591 | None:intergenic |
| AGCCTTTCCTGAAGAACCTG+AGG | 0.626329 | 4_1:+80272408 | Msa0576200:CDS |
| GCTTTATCTGCTGAAGCTAG+GGG | 0.628411 | 4_1:+80273862 | Msa0576200:three_prime_UTR |
| GATGCACGACTGGGGCAACA+AGG | 0.629010 | 4_1:-80271172 | None:intergenic |
| CTTTATCTGCTGAAGCTAGG+GGG | 0.631770 | 4_1:+80273863 | Msa0576200:three_prime_UTR |
| CTTACAGCTCCATTGTTCAG+TGG | 0.632852 | 4_1:+80273598 | Msa0576200:CDS |
| TTGGTCTCTCTATCCCCAGA+AGG | 0.633023 | 4_1:-80272262 | None:intergenic |
| TCAAGCAGAAAAGTCTCAAG+AGG | 0.634015 | 4_1:+80272003 | Msa0576200:CDS |
| CCTGCTAGAGGGAGGCAGAG+AGG | 0.636042 | 4_1:-80272110 | None:intergenic |
| ATAGCAGACATGTTAGGCAA+CGG | 0.636881 | 4_1:-80274060 | None:intergenic |
| GCTGGATTTCCACTGAACAA+TGG | 0.638532 | 4_1:-80273607 | None:intergenic |
| GGAGTTCCTGCCAAAGAAGG+CGG | 0.639166 | 4_1:+80271770 | Msa0576200:CDS |
| GGATGAAGCGATTTGTAGGG+AGG | 0.639484 | 4_1:+80268491 | Msa0576200:CDS |
| ATACAAAGGCGGGTATATTG+CGG | 0.640628 | 4_1:-80271895 | None:intergenic |
| TCTGGGGATAGAGAGACCAA+TGG | 0.642628 | 4_1:+80272265 | Msa0576200:CDS |
| GATGATCTTAGAAATTGGAA+AGG | 0.644573 | 4_1:+80271436 | Msa0576200:CDS |
| CAAGAGGAGAGTAAACTGAA+AGG | 0.649939 | 4_1:-80267606 | None:intergenic |
| GGACTCTACAAAGTCTGCAG+TGG | 0.650459 | 4_1:+80272501 | Msa0576200:CDS |
| TCCGCTCAATGAGATCGGCT+CGG | 0.650558 | 4_1:-80268295 | None:intergenic |
| GGATCCTAGAAGAAATCCCA+AGG | 0.650740 | 4_1:+80270342 | Msa0576200:CDS |
| AAACTGAAAGGAACGTGGAG+CGG | 0.654157 | 4_1:-80267594 | None:intergenic |
| GTCATCCAGAAGATTGTGTG+TGG | 0.654869 | 4_1:+80272367 | Msa0576200:CDS |
| TACATTGCGTGTTATGACAG+AGG | 0.656944 | 4_1:+80270438 | Msa0576200:CDS |
| CCCGCCTTTGTATTTCCCGG+TGG | 0.657779 | 4_1:+80271905 | Msa0576200:CDS |
| TGCTGCGATTAGAGCCGTCG+AGG | 0.659317 | 4_1:-80267825 | None:intergenic |
| TGAACATCCCTGCTAGAGGG+AGG | 0.659467 | 4_1:-80272118 | None:intergenic |
| TATATTGCGGCATTTCACAT+GGG | 0.659713 | 4_1:-80271882 | None:intergenic |
| CAAGACGCGTGAGCTCGAGA+AGG | 0.662270 | 4_1:+80268338 | Msa0576200:CDS |
| CTAATAAGAGGCTTCCGCTG+TGG | 0.663602 | 4_1:-80273637 | None:intergenic |
| GGCCAACCTCTGAGGGAACG+CGG | 0.665594 | 4_1:-80271226 | None:intergenic |
| TTGTGCGTGCAGTAATAATG+GGG | 0.669036 | 4_1:-80268017 | None:intergenic |
| GAGGGGAGATGAAATATGTG+AGG | 0.673344 | 4_1:+80270468 | Msa0576200:CDS |
| TGAACGTCGCTTACTCACCC+AGG | 0.678323 | 4_1:-80271957 | None:intergenic |
| TTATGACAGAGGAATTTCAG+AGG | 0.679308 | 4_1:+80270449 | Msa0576200:CDS |
| ACCGAGCCGATCTCATTGAG+CGG | 0.681660 | 4_1:+80268294 | Msa0576200:CDS |
| CAAGCAGAAAAGTCTCAAGA+GGG | 0.682829 | 4_1:+80272004 | Msa0576200:CDS |
| CTGGGGCAACAAGGACCGGG+AGG | 0.684959 | 4_1:-80271163 | None:intergenic |
| ATCACACAGATGCACGACTG+GGG | 0.690923 | 4_1:-80271180 | None:intergenic |
| TTGTAGCTAGAATTCATGCA+CGG | 0.690937 | 4_1:-80270403 | None:intergenic |
| GATACTGCAGATAATAAGCG+AGG | 0.693888 | 4_1:+80273947 | Msa0576200:three_prime_UTR |
| AGAGTAAACTGAAAGGAACG+TGG | 0.694109 | 4_1:-80267599 | None:intergenic |
| ACCACCGGGAAATACAAAGG+CGG | 0.694609 | 4_1:-80271906 | None:intergenic |
| ATCCAGCACCAGTGCCACAG+CGG | 0.695774 | 4_1:+80273623 | Msa0576200:CDS |
| ACTCATATATACTCTAATGG+GGG | 0.698755 | 4_1:+80272565 | Msa0576200:CDS |
| GATTGTGTGTGGTCCATGTG+AGG | 0.722355 | 4_1:+80272378 | Msa0576200:CDS |
| GAACGTCAATATCTGCTCCG+GGG | 0.726104 | 4_1:-80269315 | None:intergenic |
| ATGACAGAGGAATTTCAGAG+GGG | 0.736796 | 4_1:+80270451 | Msa0576200:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATATATTCTTAGAA+TGG | - | chr4_1:80268156-80268175 | None:intergenic | 10.0% |
| !! | TACAAAATTTGAATTAAAAA+TGG | - | chr4_1:80269286-80269305 | None:intergenic | 10.0% |
| !!! | ATTTTTAATTCAAATTTTGT+AGG | + | chr4_1:80269285-80269304 | Msa0576200:intron | 10.0% |
| !!! | TTATTTTAATACTTTTTATG+GGG | + | chr4_1:80270600-80270619 | Msa0576200:intron | 10.0% |
| !!! | TATTTTAATCTATAACAAAT+GGG | - | chr4_1:80270716-80270735 | None:intergenic | 10.0% |
| !!! | TTATTTTAATCTATAACAAA+TGG | - | chr4_1:80270717-80270736 | None:intergenic | 10.0% |
| !! | AAAAAAAATAATAAACAAAC+AGG | + | chr4_1:80270998-80271017 | Msa0576200:intron | 10.0% |
| !! | AAATTATAACTAAAAAAACT+AGG | - | chr4_1:80272777-80272796 | None:intergenic | 10.0% |
| !! | AAATAAAAATTAAGGATATA+TGG | - | chr4_1:80273438-80273457 | None:intergenic | 10.0% |
| !! | ATAAAAAGAAGAAATTACAA+AGG | - | chr4_1:80267909-80267928 | None:intergenic | 15.0% |
| !! | ATTGAAAATAATGAATCTAT+TGG | - | chr4_1:80269149-80269168 | None:intergenic | 15.0% |
| !! | ATAAGTAAATACAATATTTC+CGG | - | chr4_1:80269213-80269232 | None:intergenic | 15.0% |
| !!! | TATTCAATCATTTATTTTGT+TGG | + | chr4_1:80269247-80269266 | Msa0576200:intron | 15.0% |
| !!! | TATTTTAATACTTTTTATGG+GGG | + | chr4_1:80270601-80270620 | Msa0576200:intron | 15.0% |
| !!! | TTGAAGAAAATCATTTTTAA+TGG | - | chr4_1:80270879-80270898 | None:intergenic | 15.0% |
| !!! | AAAAATGAGTTTGTTAAAAA+TGG | - | chr4_1:80270929-80270948 | None:intergenic | 15.0% |
| !!! | AAAAAAGAGAAAAAAAGTAT+TGG | - | chr4_1:80271250-80271269 | None:intergenic | 15.0% |
| !! | TTCTTATAAGATTCAAAAAA+CGG | - | chr4_1:80271382-80271401 | None:intergenic | 15.0% |
| !! | AATCTTATAAGAATTATTTG+CGG | + | chr4_1:80271389-80271408 | Msa0576200:CDS | 15.0% |
| !! | TTTATATACATAACCTAATT+TGG | + | chr4_1:80271617-80271636 | Msa0576200:intron | 15.0% |
| !! | CTTAATATATATCTTACATT+TGG | + | chr4_1:80272612-80272631 | Msa0576200:intron | 15.0% |
| !! | AAAATCAACAACAATTTATA+AGG | - | chr4_1:80273247-80273266 | None:intergenic | 15.0% |
| !! | TATGGTTGAAATAAAAATAA+GGG | - | chr4_1:80273493-80273512 | None:intergenic | 15.0% |
| !! | ATATGGTTGAAATAAAAATA+AGG | - | chr4_1:80273494-80273513 | None:intergenic | 15.0% |
| !!! | TTATTTTTATTTCAACCATA+TGG | + | chr4_1:80273493-80273512 | Msa0576200:intron | 15.0% |
| !!! | ATGCTGATTTAGTTTTTTTA+GGG | + | chr4_1:80267864-80267883 | Msa0576200:five_prime_UTR | 20.0% |
| !! | TAAACTTTGAGTATAAAGTA+TGG | - | chr4_1:80267979-80267998 | None:intergenic | 20.0% |
| !!! | ATACTCAAAGTTTATACTTT+TGG | + | chr4_1:80267985-80268004 | Msa0576200:five_prime_UTR | 20.0% |
| !! | TAGGGTAATTTGAATTATTT+AGG | + | chr4_1:80268677-80268696 | Msa0576200:intron | 20.0% |
| !! | AGGGTAATTTGAATTATTTA+GGG | + | chr4_1:80268678-80268697 | Msa0576200:intron | 20.0% |
| !!! | ATTTTATGAACAGAAGATTT+TGG | + | chr4_1:80269082-80269101 | Msa0576200:intron | 20.0% |
| !! | AAATGATTGAATAAATACAC+TGG | - | chr4_1:80269240-80269259 | None:intergenic | 20.0% |
| !!! | CATTTTTAAAAGTTGACTTA+GGG | + | chr4_1:80269386-80269405 | Msa0576200:intron | 20.0% |
| !!! | TAAGTAATACTGTTTGTTAT+TGG | + | chr4_1:80269741-80269760 | Msa0576200:intron | 20.0% |
| !!! | ATTATTGTTAAGAAAAGCAT+AGG | + | chr4_1:80270765-80270784 | Msa0576200:intron | 20.0% |
| !! | AAGAGAGAAAACATAATTTA+TGG | - | chr4_1:80270856-80270875 | None:intergenic | 20.0% |
| !!! | ATAAGGTTTCTGATATTTTT+AGG | + | chr4_1:80271309-80271328 | Msa0576200:intron | 20.0% |
| !! | AAATAAATGAAACTACAAAG+AGG | - | chr4_1:80271520-80271539 | None:intergenic | 20.0% |
| !!! | TTTATTTTCTCAAAAAGAGT+TGG | + | chr4_1:80271566-80271585 | Msa0576200:intron | 20.0% |
| !!! | TTATTTTCTCAAAAAGAGTT+GGG | + | chr4_1:80271567-80271586 | Msa0576200:intron | 20.0% |
| !!! | AGAAATAAAGTCAAAGATTT+TGG | + | chr4_1:80272454-80272473 | Msa0576200:CDS | 20.0% |
| !! | AATAAAAATTGACAGCAATT+TGG | + | chr4_1:80272854-80272873 | Msa0576200:intron | 20.0% |
| !! | TAATTAACCACATATTCAAA+CGG | - | chr4_1:80272890-80272909 | None:intergenic | 20.0% |
| !! | GATGGATAATGAATATAATA+AGG | + | chr4_1:80272919-80272938 | Msa0576200:intron | 20.0% |
| !! | GTTATTGACATTAAAAATTG+TGG | + | chr4_1:80273123-80273142 | Msa0576200:intron | 20.0% |
| !! | GATGGTCAATAAATATAATA+AGG | - | chr4_1:80273186-80273205 | None:intergenic | 20.0% |
| !! | GGTTAATTATATTTAGTAGA+TGG | - | chr4_1:80273204-80273223 | None:intergenic | 20.0% |
| !! | GTGACAGAAAATAAAAATTA+AGG | - | chr4_1:80273446-80273465 | None:intergenic | 20.0% |
| !! | TTTCTTAATGATATACCATA+TGG | - | chr4_1:80273511-80273530 | None:intergenic | 20.0% |
| !! | ATATCATTAAGAAATCAAAG+TGG | + | chr4_1:80273517-80273536 | Msa0576200:intron | 20.0% |
| !! | TAATTATTCTTCTTATTCTC+AGG | + | chr4_1:80273784-80273803 | Msa0576200:intron | 20.0% |
| !!! | ATTCTAACTTTTTTCCTTAC+AGG | + | chr4_1:80267702-80267721 | Msa0576200:intron | 25.0% |
| !!! | CATGCTGATTTAGTTTTTTT+AGG | + | chr4_1:80267863-80267882 | Msa0576200:five_prime_UTR | 25.0% |
| !!! | ACTAAAAAGTTTGTTGTTGA+AGG | - | chr4_1:80267935-80267954 | None:intergenic | 25.0% |
| !!! | ATTGTTTTGTACGTTTCTAT+TGG | + | chr4_1:80268100-80268119 | Msa0576200:five_prime_UTR | 25.0% |
| !!! | AAAGTGTAGTAATTTGTTGA+TGG | + | chr4_1:80268218-80268237 | Msa0576200:exon | 25.0% |
| !!! | AAGTGTAGTAATTTGTTGAT+GGG | + | chr4_1:80268219-80268238 | Msa0576200:exon | 25.0% |
| ! | ATCATTTACTTCATCATCTA+GGG | + | chr4_1:80268659-80268678 | Msa0576200:intron | 25.0% |
| ! | CTTGGAAATATTTCCAAATA+AGG | - | chr4_1:80268760-80268779 | None:intergenic | 25.0% |
| !! | AATGCCATGATTTTTACTTT+TGG | + | chr4_1:80268965-80268984 | Msa0576200:CDS | 25.0% |
| ! | TGATCCAAAAGTAAAAATCA+TGG | - | chr4_1:80268972-80268991 | None:intergenic | 25.0% |
| ! | AAATAATGAATCTATTGGAG+TGG | - | chr4_1:80269144-80269163 | None:intergenic | 25.0% |
| !!! | CCTAAGTCAACTTTTAAAAA+TGG | - | chr4_1:80269388-80269407 | None:intergenic | 25.0% |
| !!! | CCATTTTTAAAAGTTGACTT+AGG | + | chr4_1:80269385-80269404 | Msa0576200:intron | 25.0% |
| !!! | ATTCAGACAACAATTTTAGT+GGG | - | chr4_1:80269433-80269452 | None:intergenic | 25.0% |
| !! | AATTCAGACAACAATTTTAG+TGG | - | chr4_1:80269434-80269453 | None:intergenic | 25.0% |
| ! | ACTAAAATTGTTGTCTGAAT+TGG | + | chr4_1:80269433-80269452 | Msa0576200:intron | 25.0% |
| ! | ACAAAGATAATTGTGCATAA+AGG | - | chr4_1:80269590-80269609 | None:intergenic | 25.0% |
| ! | TTTATGCACAATTATCTTTG+TGG | + | chr4_1:80269589-80269608 | Msa0576200:CDS | 25.0% |
| ! | TTATGCACAATTATCTTTGT+GGG | + | chr4_1:80269590-80269609 | Msa0576200:CDS | 25.0% |
| ! | TAACAAACAGTATTACTTAG+TGG | - | chr4_1:80269740-80269759 | None:intergenic | 25.0% |
| !!! | AATACTGTTTGTTATTGGAT+AGG | + | chr4_1:80269746-80269765 | Msa0576200:intron | 25.0% |
| !! | AGACAAAGATAGAACTTTTA+CGG | + | chr4_1:80269884-80269903 | Msa0576200:intron | 25.0% |
| ! | TGTTTATTCAAATGTATGCA+AGG | + | chr4_1:80270019-80270038 | Msa0576200:CDS | 25.0% |
| ! | ACATATCATGAAGAAAAGTT+AGG | - | chr4_1:80270131-80270150 | None:intergenic | 25.0% |
| ! | ATTAGATGGTATTTATCCTT+GGG | - | chr4_1:80270361-80270380 | None:intergenic | 25.0% |
| !!! | TTTTTATCTTTTTGAGCAGT+AGG | - | chr4_1:80270637-80270656 | None:intergenic | 25.0% |
| ! | ACTCTCACAATATTAGTAAT+AGG | + | chr4_1:80270689-80270708 | Msa0576200:intron | 25.0% |
| ! | CTCTCACAATATTAGTAATA+GGG | + | chr4_1:80270690-80270709 | Msa0576200:intron | 25.0% |
| ! | AGAGTATAGAGTGAAAATTT+GGG | - | chr4_1:80271067-80271086 | None:intergenic | 25.0% |
| ! | TAGAGTATAGAGTGAAAATT+TGG | - | chr4_1:80271068-80271087 | None:intergenic | 25.0% |
| !!! | CATTTGTGTTGCTTAATATA+AGG | + | chr4_1:80271292-80271311 | Msa0576200:intron | 25.0% |
| !!! | TTTCTGATATTTTTAGGCTA+TGG | + | chr4_1:80271315-80271334 | Msa0576200:intron | 25.0% |
| ! | TAAGATTCAAAAAACGGATA+GGG | - | chr4_1:80271376-80271395 | None:intergenic | 25.0% |
| ! | ATAAGATTCAAAAAACGGAT+AGG | - | chr4_1:80271377-80271396 | None:intergenic | 25.0% |
| !!! | ATGTTGATGATCTTAGAAAT+TGG | + | chr4_1:80271431-80271450 | Msa0576200:CDS | 25.0% |
| ! | TGAGAAAATAAAACAGAAAG+AGG | - | chr4_1:80271558-80271577 | None:intergenic | 25.0% |
| !! | TATTTTCTCAAAAAGAGTTG+GGG | + | chr4_1:80271568-80271587 | Msa0576200:intron | 25.0% |
| ! | GGTTATGTATATAAACAAAG+AGG | - | chr4_1:80271612-80271631 | None:intergenic | 25.0% |
| !!! | AAACCTGATTTGAATTTTTC+AGG | + | chr4_1:80272232-80272251 | Msa0576200:CDS | 25.0% |
| !!! | AACCTGATTTGAATTTTTCA+GGG | + | chr4_1:80272233-80272252 | Msa0576200:CDS | 25.0% |
| !!! | TAATTTTGAAGAAGCTGAAA+AGG | + | chr4_1:80272342-80272361 | Msa0576200:CDS | 25.0% |
| !! | AATAAAGTCAAAGATTTTGG+TGG | + | chr4_1:80272457-80272476 | Msa0576200:CDS | 25.0% |
| !!! | ATAAAGTCAAAGATTTTGGT+GGG | + | chr4_1:80272458-80272477 | Msa0576200:CDS | 25.0% |
| !!! | TTTTCCTTTTGAGAAAAAAC+AGG | - | chr4_1:80272535-80272554 | None:intergenic | 25.0% |
| ! | TCAACTCATATATACTCTAA+TGG | + | chr4_1:80272562-80272581 | Msa0576200:CDS | 25.0% |
| ! | CAACTCATATATACTCTAAT+GGG | + | chr4_1:80272563-80272582 | Msa0576200:CDS | 25.0% |
| ! | AACTCATATATACTCTAATG+GGG | + | chr4_1:80272564-80272583 | Msa0576200:CDS | 25.0% |
| ! | ACTCAAAAACTTGAAATTCA+TGG | - | chr4_1:80273007-80273026 | None:intergenic | 25.0% |
| !!! | GAATTTCAAGTTTTTGAGTA+TGG | + | chr4_1:80273008-80273027 | Msa0576200:intron | 25.0% |
| ! | CATTATTTGGATGGTTATAA+TGG | - | chr4_1:80273041-80273060 | None:intergenic | 25.0% |
| ! | ACAGTTAAACATTATTTGGA+TGG | - | chr4_1:80273050-80273069 | None:intergenic | 25.0% |
| ! | ACGTACAGTTAAACATTATT+TGG | - | chr4_1:80273054-80273073 | None:intergenic | 25.0% |
| ! | TATCTATTAACCATAACTTG+CGG | + | chr4_1:80273076-80273095 | Msa0576200:intron | 25.0% |
| ! | AAATATACACCTAATAATCG+TGG | + | chr4_1:80273101-80273120 | Msa0576200:intron | 25.0% |
| ! | GTTAATGTAGTTCAAATGTA+TGG | - | chr4_1:80273225-80273244 | None:intergenic | 25.0% |
| ! | ATTATGGTTTACCTAATAAG+AGG | - | chr4_1:80273652-80273671 | None:intergenic | 25.0% |
| !! | GATTTCCATTTTCTTGTATT+TGG | + | chr4_1:80273709-80273728 | Msa0576200:intron | 25.0% |
| TGAGATTGAAATGAAATGTG+TGG | - | chr4_1:80267665-80267684 | None:intergenic | 30.0% | |
| AATCAGCATGAAATGATGAA+TGG | - | chr4_1:80267853-80267872 | None:intergenic | 30.0% | |
| !! | AGTGTAGTAATTTGTTGATG+GGG | + | chr4_1:80268220-80268239 | Msa0576200:exon | 30.0% |
| GAGAATAATCAATTCGCTAT+AGG | - | chr4_1:80268377-80268396 | None:intergenic | 30.0% | |
| TCAACAAAATAAATCCAACC+TGG | - | chr4_1:80268536-80268555 | None:intergenic | 30.0% | |
| GATCATTTACTTCATCATCT+AGG | + | chr4_1:80268658-80268677 | Msa0576200:intron | 30.0% | |
| TTGGAAATATTTCCAAGTTG+AGG | + | chr4_1:80268763-80268782 | Msa0576200:intron | 30.0% | |
| ! | TGGAAATATTTCCAAGTTGA+GGG | + | chr4_1:80268764-80268783 | Msa0576200:intron | 30.0% |
| CATTTCACGTTATACCATAT+TGG | + | chr4_1:80268811-80268830 | Msa0576200:intron | 30.0% | |
| GTTATACCATATTGGAAAAG+TGG | + | chr4_1:80268819-80268838 | Msa0576200:intron | 30.0% | |
| CCAAAATATATGAGTTCATG+AGG | - | chr4_1:80268852-80268871 | None:intergenic | 30.0% | |
| ! | CCTCATGAACTCATATATTT+TGG | + | chr4_1:80268849-80268868 | Msa0576200:intron | 30.0% |
| ! | GCATACAAGAAAATTTTGGA+AGG | - | chr4_1:80269023-80269042 | None:intergenic | 30.0% |
| TCTTTCCATATCAAATGTGA+TGG | + | chr4_1:80269174-80269193 | Msa0576200:intron | 30.0% | |
| TTTGACCATCACATTTGATA+TGG | - | chr4_1:80269182-80269201 | None:intergenic | 30.0% | |
| AAATGTGATGGTCAAATTTG+TGG | + | chr4_1:80269186-80269205 | Msa0576200:intron | 30.0% | |
| ! | ATTCAAATTTTGTAGGTGCA+TGG | + | chr4_1:80269292-80269311 | Msa0576200:intron | 30.0% |
| TTCCATAAATCACTTACTTC+GGG | - | chr4_1:80269621-80269640 | None:intergenic | 30.0% | |
| CTTCCATAAATCACTTACTT+CGG | - | chr4_1:80269622-80269641 | None:intergenic | 30.0% | |
| TCTTTGTCTACCTGAATATT+TGG | - | chr4_1:80269873-80269892 | None:intergenic | 30.0% | |
| TACAAGTAACATTGAAGTTC+AGG | - | chr4_1:80270092-80270111 | None:intergenic | 30.0% | |
| ! | CTTTTCTTCATGATATGTCA+CGG | + | chr4_1:80270133-80270152 | Msa0576200:intron | 30.0% |
| ! | TTTTCTTCATGATATGTCAC+GGG | + | chr4_1:80270134-80270153 | Msa0576200:intron | 30.0% |
| !! | TTTTCTTGGTGGTATAAACT+GGG | + | chr4_1:80270168-80270187 | Msa0576200:CDS | 30.0% |
| ! | TAATAGCACAAAGCATTACT+GGG | - | chr4_1:80270294-80270313 | None:intergenic | 30.0% |
| ! | AGTAATGCTTTGTGCTATTA+GGG | + | chr4_1:80270294-80270313 | Msa0576200:CDS | 30.0% |
| CATTAGATGGTATTTATCCT+TGG | - | chr4_1:80270362-80270381 | None:intergenic | 30.0% | |
| GAGTAATTATTGGCATTAGA+TGG | - | chr4_1:80270375-80270394 | None:intergenic | 30.0% | |
| GATGATCTTAGAAATTGGAA+AGG | + | chr4_1:80271436-80271455 | Msa0576200:CDS | 30.0% | |
| TATATACCTTCAATGTCAAC+TGG | - | chr4_1:80271483-80271502 | None:intergenic | 30.0% | |
| ! | ATTTTCTCAAAAAGAGTTGG+GGG | + | chr4_1:80271569-80271588 | Msa0576200:intron | 30.0% |
| !! | GATTTTTCTGAAAAATCACC+AGG | - | chr4_1:80271704-80271723 | None:intergenic | 30.0% |
| ATGAAGTAAGAACAGTGTAA+AGG | - | chr4_1:80271731-80271750 | None:intergenic | 30.0% | |
| TTTACACTGTTCTTACTTCA+TGG | + | chr4_1:80271730-80271749 | Msa0576200:CDS | 30.0% | |
| TTACACTGTTCTTACTTCAT+GGG | + | chr4_1:80271731-80271750 | Msa0576200:CDS | 30.0% | |
| !! | ACCTGATTTGAATTTTTCAG+GGG | + | chr4_1:80272234-80272253 | Msa0576200:CDS | 30.0% |
| !!! | AGAACCTGTTTTTTCTCAAA+AGG | + | chr4_1:80272528-80272547 | Msa0576200:CDS | 30.0% |
| ACTCATATATACTCTAATGG+GGG | + | chr4_1:80272565-80272584 | Msa0576200:CDS | 30.0% | |
| TAATTAAGTTCATCTGCAGA+TGG | - | chr4_1:80272961-80272980 | None:intergenic | 30.0% | |
| GTTAATGACATTCAAAATCG+TGG | - | chr4_1:80272985-80273004 | None:intergenic | 30.0% | |
| TGTCAATAACCACGATTATT+AGG | - | chr4_1:80273113-80273132 | None:intergenic | 30.0% | |
| AAGTGTAAACAACAGAAGAA+GGG | - | chr4_1:80273560-80273579 | None:intergenic | 30.0% | |
| AAAGTGTAAACAACAGAAGA+AGG | - | chr4_1:80273561-80273580 | None:intergenic | 30.0% | |
| CATCGTTCAACAACTTATTA+TGG | - | chr4_1:80273668-80273687 | None:intergenic | 30.0% | |
| CAAAGCCAAATACAAGAAAA+TGG | - | chr4_1:80273717-80273736 | None:intergenic | 30.0% | |
| !! | CATTTTCTTGTATTTGGCTT+TGG | + | chr4_1:80273715-80273734 | Msa0576200:intron | 30.0% |
| TTGGAGTTTATGTCATGATT+AGG | + | chr4_1:80273734-80273753 | Msa0576200:intron | 30.0% | |
| CTGCAAATAAGTGAAATTGA+TGG | - | chr4_1:80273988-80274007 | None:intergenic | 30.0% | |
| !! | AAAGGGTATTTGCATTGCAT+TGG | + | chr4_1:80267565-80267584 | Msa0576200:five_prime_UTR | 35.0% |
| !! | AGTTTACTCTCCTCTTGTTT+TGG | + | chr4_1:80267612-80267631 | Msa0576200:five_prime_UTR | 35.0% |
| ACGATACAAACCAAAACAAG+AGG | - | chr4_1:80267625-80267644 | None:intergenic | 35.0% | |
| CAAATCACACCTATTCTCAT+CGG | + | chr4_1:80267757-80267776 | Msa0576200:five_prime_UTR | 35.0% | |
| ATTGTGCGTGCAGTAATAAT+GGG | - | chr4_1:80268021-80268040 | None:intergenic | 35.0% | |
| TAGCTATGTTGTGCTGAATT+TGG | + | chr4_1:80268414-80268433 | Msa0576200:intron | 35.0% | |
| TGGGATCGAAATCACAAAAA+GGG | - | chr4_1:80268710-80268729 | None:intergenic | 35.0% | |
| TTGGGATCGAAATCACAAAA+AGG | - | chr4_1:80268711-80268730 | None:intergenic | 35.0% | |
| GTGATGTTGTGAAATGAGTT+AGG | + | chr4_1:80268874-80268893 | Msa0576200:intron | 35.0% | |
| ! | TGAGTTAGGTTGTGAAGATT+TGG | + | chr4_1:80268888-80268907 | Msa0576200:intron | 35.0% |
| ! | GAGTTAGGTTGTGAAGATTT+GGG | + | chr4_1:80268889-80268908 | Msa0576200:intron | 35.0% |
| AAAGGGATTTAACGAACAAC+TGG | + | chr4_1:80268931-80268950 | Msa0576200:CDS | 35.0% | |
| ! | GCACGCATACAAGAAAATTT+TGG | - | chr4_1:80269027-80269046 | None:intergenic | 35.0% |
| AATTGCATAAGTGAGTGTGA+GGG | - | chr4_1:80269051-80269070 | None:intergenic | 35.0% | |
| AAATTGCATAAGTGAGTGTG+AGG | - | chr4_1:80269052-80269071 | None:intergenic | 35.0% | |
| !! | GAACAGAAGATTTTGGAAAG+AGG | + | chr4_1:80269089-80269108 | Msa0576200:intron | 35.0% |
| AGATATTGACGTTCTTTGTG+TGG | + | chr4_1:80269324-80269343 | Msa0576200:CDS | 35.0% | |
| GATATTGACGTTCTTTGTGT+GGG | + | chr4_1:80269325-80269344 | Msa0576200:CDS | 35.0% | |
| CAAGAATTATCACACCTTTC+TGG | - | chr4_1:80269365-80269384 | None:intergenic | 35.0% | |
| !! | AAAGTTGACTTAGGGTTTTC+AGG | + | chr4_1:80269394-80269413 | Msa0576200:intron | 35.0% |
| !! | AGACAACAATTTTAGTGGGA+AGG | - | chr4_1:80269429-80269448 | None:intergenic | 35.0% |
| !! | TTGTTGTCTGAATTGGCTTT+AGG | + | chr4_1:80269440-80269459 | Msa0576200:intron | 35.0% |
| !! | TGGCTTTAGGAAGATTTCTT+TGG | + | chr4_1:80269453-80269472 | Msa0576200:intron | 35.0% |
| TTCCCGAAGTAAGTGATTTA+TGG | + | chr4_1:80269616-80269635 | Msa0576200:intron | 35.0% | |
| TAGTTTCAAGCAAAATGCAG+AGG | - | chr4_1:80269680-80269699 | None:intergenic | 35.0% | |
| !! | GTTTGTTATTGGATAGGACT+TGG | + | chr4_1:80269752-80269771 | Msa0576200:intron | 35.0% |
| ATAGGACTTGGATTTATCAC+AGG | + | chr4_1:80269764-80269783 | Msa0576200:intron | 35.0% | |
| GACTGATCAAATCTTGCATT+TGG | + | chr4_1:80269845-80269864 | Msa0576200:CDS | 35.0% | |
| ! | GCATTTGGTTCCAAATATTC+AGG | + | chr4_1:80269860-80269879 | Msa0576200:CDS | 35.0% |
| ATTGAGATGCGTGAAGTTAT+GGG | + | chr4_1:80269983-80270002 | Msa0576200:CDS | 35.0% | |
| !! | GTTTTCTTGGTGGTATAAAC+TGG | + | chr4_1:80270167-80270186 | Msa0576200:CDS | 35.0% |
| AACATATTAGGCAGTGCATT+TGG | - | chr4_1:80270226-80270245 | None:intergenic | 35.0% | |
| AAATGCACTGCCTAATATGT+TGG | + | chr4_1:80270225-80270244 | Msa0576200:CDS | 35.0% | |
| AATCGAGACACCAACATATT+AGG | - | chr4_1:80270238-80270257 | None:intergenic | 35.0% | |
| !! | TCTTTAGGGTATACACTCAA+TGG | + | chr4_1:80270257-80270276 | Msa0576200:CDS | 35.0% |
| ! | CTAATAGCACAAAGCATTAC+TGG | - | chr4_1:80270295-80270314 | None:intergenic | 35.0% |
| ! | CAGTAATGCTTTGTGCTATT+AGG | + | chr4_1:80270293-80270312 | Msa0576200:CDS | 35.0% |
| ! | ATCTCTTGGACTTCAAGTTT+GGG | + | chr4_1:80270321-80270340 | Msa0576200:CDS | 35.0% |
| TTATCCTTGGGATTTCTTCT+AGG | - | chr4_1:80270349-80270368 | None:intergenic | 35.0% | |
| GGATAAGCAGGAGTAATTAT+TGG | - | chr4_1:80270385-80270404 | None:intergenic | 35.0% | |
| TTGTAGCTAGAATTCATGCA+CGG | - | chr4_1:80270406-80270425 | None:intergenic | 35.0% | |
| TTATGACAGAGGAATTTCAG+AGG | + | chr4_1:80270449-80270468 | Msa0576200:CDS | 35.0% | |
| TATGACAGAGGAATTTCAGA+GGG | + | chr4_1:80270450-80270469 | Msa0576200:CDS | 35.0% | |
| ATAAACAAACAGGCACATAG+TGG | + | chr4_1:80271008-80271027 | Msa0576200:intron | 35.0% | |
| AAAGTGACAACTGTACAGAT+TGG | - | chr4_1:80271120-80271139 | None:intergenic | 35.0% | |
| !!! | CTGATATTTTTAGGCTATGG+AGG | + | chr4_1:80271318-80271337 | Msa0576200:intron | 35.0% |
| ATCTTAGAAATTGGAAAGGC+TGG | + | chr4_1:80271440-80271459 | Msa0576200:CDS | 35.0% | |
| TCTTAGAAATTGGAAAGGCT+GGG | + | chr4_1:80271441-80271460 | Msa0576200:CDS | 35.0% | |
| AATAAAACAGAAAGAGGCAG+AGG | - | chr4_1:80271552-80271571 | None:intergenic | 35.0% | |
| ! | TTTTCTCAAAAAGAGTTGGG+GGG | + | chr4_1:80271570-80271589 | Msa0576200:intron | 35.0% |
| CTCTCAATCTAGATGTTCAA+AGG | - | chr4_1:80271647-80271666 | None:intergenic | 35.0% | |
| CTTTGAACATCTAGATTGAG+AGG | + | chr4_1:80271645-80271664 | Msa0576200:intron | 35.0% | |
| TAGATTGAGAGGAACACTTA+TGG | + | chr4_1:80271656-80271675 | Msa0576200:intron | 35.0% | |
| GAGATGGATATATTCATTCC+AGG | - | chr4_1:80271863-80271882 | None:intergenic | 35.0% | |
| TATATTGCGGCATTTCACAT+GGG | - | chr4_1:80271885-80271904 | None:intergenic | 35.0% | |
| TCCCCTGAAAAATTCAAATC+AGG | - | chr4_1:80272238-80272257 | None:intergenic | 35.0% | |
| GAACTTGGCAAACATCAATT+TGG | + | chr4_1:80272480-80272499 | Msa0576200:CDS | 35.0% | |
| CACAATCAGTTAGAAAAAGC+TGG | - | chr4_1:80272686-80272705 | None:intergenic | 35.0% | |
| ATGTGGTTAATTACGTTCAG+TGG | + | chr4_1:80272897-80272916 | Msa0576200:intron | 35.0% | |
| GTATATTTGACCGCAAGTTA+TGG | - | chr4_1:80273089-80273108 | None:intergenic | 35.0% | |
| ! | AAGTTCGCAGGCTTTATATT+AGG | + | chr4_1:80273321-80273340 | Msa0576200:intron | 35.0% |
| ! | AGTTCGCAGGCTTTATATTA+GGG | + | chr4_1:80273322-80273341 | Msa0576200:intron | 35.0% |
| TATGAGCTGATGCAATAAGT+TGG | + | chr4_1:80273379-80273398 | Msa0576200:intron | 35.0% | |
| AGTTTATGTCATGATTAGGC+TGG | + | chr4_1:80273738-80273757 | Msa0576200:intron | 35.0% | |
| TATCAACGTTCTTGCAAATC+AGG | - | chr4_1:80273931-80273950 | None:intergenic | 35.0% | |
| ! | CAAATACCCTTTTCCCTTCT+AGG | - | chr4_1:80267557-80267576 | None:intergenic | 40.0% |
| AGAGTAAACTGAAAGGAACG+TGG | - | chr4_1:80267602-80267621 | None:intergenic | 40.0% | |
| CAAGAGGAGAGTAAACTGAA+AGG | - | chr4_1:80267609-80267628 | None:intergenic | 40.0% | |
| AGAAAACGAACGAACCTGTA+AGG | - | chr4_1:80267719-80267738 | None:intergenic | 40.0% | |
| TCGAGGTTCAACTTCAACAA+CGG | + | chr4_1:80267783-80267802 | Msa0576200:five_prime_UTR | 40.0% | |
| TTGTGCGTGCAGTAATAATG+GGG | - | chr4_1:80268020-80268039 | None:intergenic | 40.0% | |
| GATTGTGCGTGCAGTAATAA+TGG | - | chr4_1:80268022-80268041 | None:intergenic | 40.0% | |
| TTGGCGACATCATATTCAGT+TGG | - | chr4_1:80268321-80268340 | None:intergenic | 40.0% | |
| ATCCTGATTCTCATACAAGC+CGG | - | chr4_1:80268475-80268494 | None:intergenic | 40.0% | |
| ATCAGGATGAAGCGATTTGT+AGG | + | chr4_1:80268487-80268506 | Msa0576200:CDS | 40.0% | |
| TCAGGATGAAGCGATTTGTA+GGG | + | chr4_1:80268488-80268507 | Msa0576200:CDS | 40.0% | |
| ATTACACAAAGCCCTCAACT+TGG | - | chr4_1:80268778-80268797 | None:intergenic | 40.0% | |
| !! | GCTCAACCACTTTTCCAATA+TGG | - | chr4_1:80268828-80268847 | None:intergenic | 40.0% |
| GTTCGTTAAATCCCTTTGCA+CGG | - | chr4_1:80268928-80268947 | None:intergenic | 40.0% | |
| ! | ACTTTTGGATCATATCGCCT+AGG | + | chr4_1:80268980-80268999 | Msa0576200:CDS | 40.0% |
| ! | CTTTTGGATCATATCGCCTA+GGG | + | chr4_1:80268981-80269000 | Msa0576200:CDS | 40.0% |
| ! | TTTTGGATCATATCGCCTAG+GGG | + | chr4_1:80268982-80269001 | Msa0576200:CDS | 40.0% |
| TGATGGTCAAATTTGTGGAC+CGG | + | chr4_1:80269191-80269210 | Msa0576200:intron | 40.0% | |
| AAGAACGTCAATATCTGCTC+CGG | - | chr4_1:80269320-80269339 | None:intergenic | 40.0% | |
| TTGAACTTGAAACCCATCAC+TGG | - | chr4_1:80269549-80269568 | None:intergenic | 40.0% | |
| !! | GTGATGGGTTTCAAGTTCAA+TGG | + | chr4_1:80269549-80269568 | Msa0576200:CDS | 40.0% |
| CAAGTTCAATGGCATCTCTT+TGG | + | chr4_1:80269560-80269579 | Msa0576200:CDS | 40.0% | |
| CAAAATGCAGAGGTGATGAA+GGG | - | chr4_1:80269670-80269689 | None:intergenic | 40.0% | |
| CAAACTGTTCGCAGTCTTAA+TGG | + | chr4_1:80269813-80269832 | Msa0576200:CDS | 40.0% | |
| ! | GTCAGCTTTGATATGACTTC+TGG | + | chr4_1:80269906-80269925 | Msa0576200:intron | 40.0% |
| CATTGAGATGCGTGAAGTTA+TGG | + | chr4_1:80269982-80270001 | Msa0576200:CDS | 40.0% | |
| ! | ATAAACTGGGCATTGCTTGT+TGG | + | chr4_1:80270181-80270200 | Msa0576200:CDS | 40.0% |
| ! | TGTTGGTGTCTCGATTCTTT+AGG | + | chr4_1:80270242-80270261 | Msa0576200:CDS | 40.0% |
| ! | GTTGGTGTCTCGATTCTTTA+GGG | + | chr4_1:80270243-80270262 | Msa0576200:CDS | 40.0% |
| ! | ATGCTTTGTGCTATTAGGGA+AGG | + | chr4_1:80270298-80270317 | Msa0576200:CDS | 40.0% |
| ! | GATCTCTTGGACTTCAAGTT+TGG | + | chr4_1:80270320-80270339 | Msa0576200:CDS | 40.0% |
| TACATTGCGTGTTATGACAG+AGG | + | chr4_1:80270438-80270457 | Msa0576200:CDS | 40.0% | |
| ATGACAGAGGAATTTCAGAG+GGG | + | chr4_1:80270451-80270470 | Msa0576200:CDS | 40.0% | |
| GTTAGTAGAGACAAATCCCT+TGG | + | chr4_1:80271033-80271052 | Msa0576200:intron | 40.0% | |
| ! | AATTTGGGACTTACCTCCAA+GGG | - | chr4_1:80271052-80271071 | None:intergenic | 40.0% |
| ! | AAATTTGGGACTTACCTCCA+AGG | - | chr4_1:80271053-80271072 | None:intergenic | 40.0% |
| GTACAGATTGGTGTGCTAAA+TGG | - | chr4_1:80271108-80271127 | None:intergenic | 40.0% | |
| TTAGGCTATGGAGGTTAACA+AGG | + | chr4_1:80271327-80271346 | Msa0576200:intron | 40.0% | |
| GTTCAAAGGACAGCCAAATT+AGG | - | chr4_1:80271633-80271652 | None:intergenic | 40.0% | |
| TCTGAAAAATCACCAGGATG+TGG | - | chr4_1:80271698-80271717 | None:intergenic | 40.0% | |
| ATCAAATTGTCCGCCTTCTT+TGG | - | chr4_1:80271783-80271802 | None:intergenic | 40.0% | |
| GTATATTGCGGCATTTCACA+TGG | - | chr4_1:80271886-80271905 | None:intergenic | 40.0% | |
| ATACAAAGGCGGGTATATTG+CGG | - | chr4_1:80271898-80271917 | None:intergenic | 40.0% | |
| AATACCACCGGGAAATACAA+AGG | - | chr4_1:80271912-80271931 | None:intergenic | 40.0% | |
| TTGTATTTCCCGGTGGTATT+CGG | + | chr4_1:80271912-80271931 | Msa0576200:CDS | 40.0% | |
| ! | GTTACTTTGGATGGGCATTT+AGG | - | chr4_1:80271938-80271957 | None:intergenic | 40.0% |
| TCAAGCAGAAAAGTCTCAAG+AGG | + | chr4_1:80272003-80272022 | Msa0576200:CDS | 40.0% | |
| CAAGCAGAAAAGTCTCAAGA+GGG | + | chr4_1:80272004-80272023 | Msa0576200:CDS | 40.0% | |
| TCTCAAGAGGGTAAAGAGTT+GGG | + | chr4_1:80272016-80272035 | Msa0576200:CDS | 40.0% | |
| AGTTGGGAGCAAACAATGAT+AGG | + | chr4_1:80272032-80272051 | Msa0576200:CDS | 40.0% | |
| GAAAGCAAGCAGAAGATAGT+CGG | + | chr4_1:80272059-80272078 | Msa0576200:CDS | 40.0% | |
| AAAGCAAGCAGAAGATAGTC+GGG | + | chr4_1:80272060-80272079 | Msa0576200:CDS | 40.0% | |
| !!! | GTTGCTTTTCACTGATCCAT+TGG | - | chr4_1:80272284-80272303 | None:intergenic | 40.0% |
| TATCAGTAGCAGCAAGTAGA+GGG | - | chr4_1:80272318-80272337 | None:intergenic | 40.0% | |
| !! | CAAAGATTTTGGTGGGAACT+TGG | + | chr4_1:80272465-80272484 | Msa0576200:CDS | 40.0% |
| TATATACTCTAATGGGGGCT+TGG | + | chr4_1:80272570-80272589 | Msa0576200:CDS | 40.0% | |
| CTTTGTCAAATCTGCGCATA+TGG | + | chr4_1:80272746-80272765 | Msa0576200:CDS | 40.0% | |
| CTTTACGCCGTTTGAATATG+TGG | + | chr4_1:80272880-80272899 | Msa0576200:intron | 40.0% | |
| GGTTAATTACGTTCAGTGGA+TGG | + | chr4_1:80272901-80272920 | Msa0576200:intron | 40.0% | |
| ATTTATCGCATGAAGTTCGC+AGG | + | chr4_1:80273309-80273328 | Msa0576200:intron | 40.0% | |
| AGGTTGAATTTCACCTCCTT+GGG | + | chr4_1:80273804-80273823 | Msa0576200:intron | 40.0% | |
| ! | AAGCTTTATCTGCTGAAGCT+AGG | + | chr4_1:80273860-80273879 | Msa0576200:three_prime_UTR | 40.0% |
| ! | AGCTTTATCTGCTGAAGCTA+GGG | + | chr4_1:80273861-80273880 | Msa0576200:three_prime_UTR | 40.0% |
| GATACTGCAGATAATAAGCG+AGG | + | chr4_1:80273947-80273966 | Msa0576200:three_prime_UTR | 40.0% | |
| ATAGCAGACATGTTAGGCAA+CGG | - | chr4_1:80274063-80274082 | None:intergenic | 40.0% | |
| AAACTGAAAGGAACGTGGAG+CGG | - | chr4_1:80267597-80267616 | None:intergenic | 45.0% | |
| CCTCGAATTCCGATGAGAAT+AGG | - | chr4_1:80267769-80267788 | None:intergenic | 45.0% | |
| CCTATTCTCATCGGAATTCG+AGG | + | chr4_1:80267766-80267785 | Msa0576200:five_prime_UTR | 45.0% | |
| CATCTTCACTTTCACCTCGA+CGG | + | chr4_1:80267811-80267830 | Msa0576200:five_prime_UTR | 45.0% | |
| !! | AATTTGTTGATGGGGAGCAC+TGG | + | chr4_1:80268228-80268247 | Msa0576200:exon | 45.0% |
| !! | ATTTGTTGATGGGGAGCACT+GGG | + | chr4_1:80268229-80268248 | Msa0576200:exon | 45.0% |
| GTTTAGTACTTGCAAGACGC+CGG | + | chr4_1:80268453-80268472 | Msa0576200:intron | 45.0% | |
| !! | ATTTGTAGGGAGGAAGTGCT+TGG | + | chr4_1:80268501-80268520 | Msa0576200:CDS | 45.0% |
| ATTTCGATCCCAAGTGACAG+AGG | + | chr4_1:80268718-80268737 | Msa0576200:intron | 45.0% | |
| TTTCGATCCCAAGTGACAGA+GGG | + | chr4_1:80268719-80268738 | Msa0576200:intron | 45.0% | |
| ! | TCTCTTTCCCTCTGTCACTT+GGG | - | chr4_1:80268729-80268748 | None:intergenic | 45.0% |
| TTCTCTTTCCCTCTGTCACT+TGG | - | chr4_1:80268730-80268749 | None:intergenic | 45.0% | |
| ! | AGAGAAGCAGACGCCTTATT+TGG | + | chr4_1:80268744-80268763 | Msa0576200:intron | 45.0% |
| AAAACCGTTAGCCGTGCAAA+GGG | + | chr4_1:80268914-80268933 | Msa0576200:CDS | 45.0% | |
| AAATCCCTTTGCACGGCTAA+CGG | - | chr4_1:80268921-80268940 | None:intergenic | 45.0% | |
| AAAAACAGCACCATACCCCT+AGG | - | chr4_1:80269000-80269019 | None:intergenic | 45.0% | |
| AGAACGTCAATATCTGCTCC+GGG | - | chr4_1:80269319-80269338 | None:intergenic | 45.0% | |
| ACCTAGACATGCAACCAGAA+AGG | + | chr4_1:80269348-80269367 | Msa0576200:CDS | 45.0% | |
| !! | ACCTTTCTGGTTGCATGTCT+AGG | - | chr4_1:80269352-80269371 | None:intergenic | 45.0% |
| ATCACTGGAACATGAGCATC+AGG | - | chr4_1:80269534-80269553 | None:intergenic | 45.0% | |
| TGATGCTCATGTTCCAGTGA+TGG | + | chr4_1:80269533-80269552 | Msa0576200:CDS | 45.0% | |
| GATGCTCATGTTCCAGTGAT+GGG | + | chr4_1:80269534-80269553 | Msa0576200:CDS | 45.0% | |
| GCAAAATGCAGAGGTGATGA+AGG | - | chr4_1:80269671-80269690 | None:intergenic | 45.0% | |
| GCAGTGCATTTGGATATAGC+TGG | - | chr4_1:80270216-80270235 | None:intergenic | 45.0% | |
| ! | GCACAAAGCATTACTGGGTT+TGG | - | chr4_1:80270289-80270308 | None:intergenic | 45.0% |
| GCTATTAGGGAAGGATCTCT+TGG | + | chr4_1:80270307-80270326 | Msa0576200:CDS | 45.0% | |
| GGATCCTAGAAGAAATCCCA+AGG | + | chr4_1:80270342-80270361 | Msa0576200:CDS | 45.0% | |
| GAATTCATGCACGGATAAGC+AGG | - | chr4_1:80270397-80270416 | None:intergenic | 45.0% | |
| GAGGGGAGATGAAATATGTG+AGG | + | chr4_1:80270468-80270487 | Msa0576200:CDS | 45.0% | |
| !!! | CTTTTTATGGGGGTACCATG+AGG | + | chr4_1:80270611-80270630 | Msa0576200:intron | 45.0% |
| !! | TTTTTGAGCAGTAGGCCTCA+TGG | - | chr4_1:80270629-80270648 | None:intergenic | 45.0% |
| AGTAGAGACAAATCCCTTGG+AGG | + | chr4_1:80271036-80271055 | Msa0576200:intron | 45.0% | |
| !! | CACTCTATACTCTAGAGCCA+TGG | + | chr4_1:80271074-80271093 | Msa0576200:intron | 45.0% |
| TTTACCTACAAACCACCTCC+CGG | + | chr4_1:80271148-80271167 | Msa0576200:CDS | 45.0% | |
| TATCACACAGATGCACGACT+GGG | - | chr4_1:80271184-80271203 | None:intergenic | 45.0% | |
| TTATCACACAGATGCACGAC+TGG | - | chr4_1:80271185-80271204 | None:intergenic | 45.0% | |
| !! | AAGTATTGGCCAACCTCTGA+GGG | - | chr4_1:80271236-80271255 | None:intergenic | 45.0% |
| !! | AAAGTATTGGCCAACCTCTG+AGG | - | chr4_1:80271237-80271256 | None:intergenic | 45.0% |
| TGGAGGTTAACAAGGCTGAT+TGG | + | chr4_1:80271335-80271354 | Msa0576200:CDS | 45.0% | |
| GGAGGTTAACAAGGCTGATT+GGG | + | chr4_1:80271336-80271355 | Msa0576200:CDS | 45.0% | |
| ATACCCGCCTTTGTATTTCC+CGG | + | chr4_1:80271902-80271921 | Msa0576200:CDS | 45.0% | |
| AATGCCCATCCAAAGTAACC+TGG | + | chr4_1:80271939-80271958 | Msa0576200:CDS | 45.0% | |
| ATGCCCATCCAAAGTAACCT+GGG | + | chr4_1:80271940-80271959 | Msa0576200:CDS | 45.0% | |
| ! | TCACCCAGGTTACTTTGGAT+GGG | - | chr4_1:80271946-80271965 | None:intergenic | 45.0% |
| CTTACTCACCCAGGTTACTT+TGG | - | chr4_1:80271951-80271970 | None:intergenic | 45.0% | |
| TAAGCGACGTTCAGAGCTTA+GGG | + | chr4_1:80271967-80271986 | Msa0576200:CDS | 45.0% | |
| ! | GAGACTTTTCTGCTTGACCA+TGG | - | chr4_1:80272000-80272019 | None:intergenic | 45.0% |
| GTCTCAAGAGGGTAAAGAGT+TGG | + | chr4_1:80272015-80272034 | Msa0576200:CDS | 45.0% | |
| TCATGAACATCCCTGCTAGA+GGG | - | chr4_1:80272124-80272143 | None:intergenic | 45.0% | |
| TTCATGAACATCCCTGCTAG+AGG | - | chr4_1:80272125-80272144 | None:intergenic | 45.0% | |
| AGCAGGGATGTTCATGAAGA+TGG | + | chr4_1:80272127-80272146 | Msa0576200:CDS | 45.0% | |
| CAAGAACTAGCAATGCTGAC+AGG | - | chr4_1:80272157-80272176 | None:intergenic | 45.0% | |
| CTATCAGTAGCAGCAAGTAG+AGG | - | chr4_1:80272319-80272338 | None:intergenic | 45.0% | |
| GTCATCCAGAAGATTGTGTG+TGG | + | chr4_1:80272367-80272386 | Msa0576200:CDS | 45.0% | |
| ATGGACCACACACAATCTTC+TGG | - | chr4_1:80272375-80272394 | None:intergenic | 45.0% | |
| AAGGCTTGATGTACCTCACA+TGG | - | chr4_1:80272394-80272413 | None:intergenic | 45.0% | |
| AGATCATCTTCAAGCTCCTC+AGG | - | chr4_1:80272427-80272446 | None:intergenic | 45.0% | |
| TTTCTGTCACACAGTGCCTT+TGG | + | chr4_1:80273456-80273475 | Msa0576200:intron | 45.0% | |
| TTCTGTCACACAGTGCCTTT+GGG | + | chr4_1:80273457-80273476 | Msa0576200:intron | 45.0% | |
| CTTACAGCTCCATTGTTCAG+TGG | + | chr4_1:80273598-80273617 | Msa0576200:CDS | 45.0% | |
| GCTGGATTTCCACTGAACAA+TGG | - | chr4_1:80273610-80273629 | None:intergenic | 45.0% | |
| ! | CAGGTTGAATTTCACCTCCT+TGG | + | chr4_1:80273803-80273822 | Msa0576200:intron | 45.0% |
| GGTTGAATTTCACCTCCTTG+GGG | + | chr4_1:80273805-80273824 | Msa0576200:intron | 45.0% | |
| ! | TTTGTCAGCAGTTTTCCCCA+AGG | - | chr4_1:80273823-80273842 | None:intergenic | 45.0% |
| GCTTTATCTGCTGAAGCTAG+GGG | + | chr4_1:80273862-80273881 | Msa0576200:three_prime_UTR | 45.0% | |
| CTTTATCTGCTGAAGCTAGG+GGG | + | chr4_1:80273863-80273882 | Msa0576200:three_prime_UTR | 45.0% | |
| TTTATCTGCTGAAGCTAGGG+GGG | + | chr4_1:80273864-80273883 | Msa0576200:three_prime_UTR | 45.0% | |
| !!! | ATTTATTTTAATACTTTTTA+TGG | + | chr4_1:80270598-80270617 | Msa0576200:intron | 5.0% |
| !!! | TTTATTTTAATACTTTTTAT+GGG | + | chr4_1:80270599-80270618 | Msa0576200:intron | 5.0% |
| AGACGCACCTAGAAGGGAAA+AGG | + | chr4_1:80267547-80267566 | Msa0576200:five_prime_UTR | 50.0% | |
| GACGCACCTAGAAGGGAAAA+GGG | + | chr4_1:80267548-80267567 | Msa0576200:five_prime_UTR | 50.0% | |
| GGGTTAAGCAACCGCGATAT+CGG | + | chr4_1:80268249-80268268 | Msa0576200:CDS | 50.0% | |
| GGTTAAGCAACCGCGATATC+GGG | + | chr4_1:80268250-80268269 | Msa0576200:CDS | 50.0% | |
| GCTCGGTTATCCCTAACCTT+TGG | - | chr4_1:80268281-80268300 | None:intergenic | 50.0% | |
| GTTGGTCCGCTCAATGAGAT+CGG | - | chr4_1:80268303-80268322 | None:intergenic | 50.0% | |
| GGATGAAGCGATTTGTAGGG+AGG | + | chr4_1:80268491-80268510 | Msa0576200:CDS | 50.0% | |
| CAAAACCGTTAGCCGTGCAA+AGG | + | chr4_1:80268913-80268932 | Msa0576200:CDS | 50.0% | |
| GATCATATCGCCTAGGGGTA+TGG | + | chr4_1:80268987-80269006 | Msa0576200:intron | 50.0% | |
| ! | ATTTTGTAGGTGCATGGCCC+CGG | + | chr4_1:80269298-80269317 | Msa0576200:intron | 50.0% |
| GAACGTCAATATCTGCTCCG+GGG | - | chr4_1:80269318-80269337 | None:intergenic | 50.0% | |
| GAACATGAGCATCAGGCACT+GGG | - | chr4_1:80269527-80269546 | None:intergenic | 50.0% | |
| AATGCAGAGGTGATGAAGGG+AGG | - | chr4_1:80269667-80269686 | None:intergenic | 50.0% | |
| ! | AAGTTATGGGCTAAGCGTCG+TGG | + | chr4_1:80269996-80270015 | Msa0576200:CDS | 50.0% |
| AAGGAAGCTCGAGCTGTAGA+TGG | + | chr4_1:80270038-80270057 | Msa0576200:CDS | 50.0% | |
| CTTCATGATATGTCACGGGC+AGG | + | chr4_1:80270138-80270157 | Msa0576200:intron | 50.0% | |
| ! | CAGGTTGCAGGTTTTCTTGG+TGG | + | chr4_1:80270157-80270176 | Msa0576200:intron | 50.0% |
| GGGTATACACTCAATGGCGT+TGG | + | chr4_1:80270263-80270282 | Msa0576200:CDS | 50.0% | |
| GCTAAATGGAGCTTCGACCA+TGG | - | chr4_1:80271094-80271113 | None:intergenic | 50.0% | |
| ATCACACAGATGCACGACTG+GGG | - | chr4_1:80271183-80271202 | None:intergenic | 50.0% | |
| CTTGCGCCAGTTGACATTGA+AGG | + | chr4_1:80271474-80271493 | Msa0576200:CDS | 50.0% | |
| CTTCAGTGTCATCCACATCC+TGG | + | chr4_1:80271683-80271702 | Msa0576200:CDS | 50.0% | |
| ATGGGTCTGCAACGTAAGCA+AGG | + | chr4_1:80271749-80271768 | Msa0576200:CDS | 50.0% | |
| CAAGGAGTTCCTGCCAAAGA+AGG | + | chr4_1:80271767-80271786 | Msa0576200:CDS | 50.0% | |
| AATTGTCCGCCTTCTTTGGC+AGG | - | chr4_1:80271779-80271798 | None:intergenic | 50.0% | |
| CTGTCAATGCGTACACGCAA+TGG | + | chr4_1:80271834-80271853 | Msa0576200:CDS | 50.0% | |
| ACCACCGGGAAATACAAAGG+CGG | - | chr4_1:80271909-80271928 | None:intergenic | 50.0% | |
| CATTTAGGCCGAATACCACC+GGG | - | chr4_1:80271923-80271942 | None:intergenic | 50.0% | |
| GCATTTAGGCCGAATACCAC+CGG | - | chr4_1:80271924-80271943 | None:intergenic | 50.0% | |
| ! | CTCACCCAGGTTACTTTGGA+TGG | - | chr4_1:80271947-80271966 | None:intergenic | 50.0% |
| GTAAGCGACGTTCAGAGCTT+AGG | + | chr4_1:80271966-80271985 | Msa0576200:CDS | 50.0% | |
| CGTTCAGAGCTTAGGGTTTC+CGG | + | chr4_1:80271974-80271993 | Msa0576200:CDS | 50.0% | |
| ! | CTTTTCTGCTTGACCATGGC+CGG | - | chr4_1:80271996-80272015 | None:intergenic | 50.0% |
| AGGCAGAGAGGAAAAGGACT+GGG | - | chr4_1:80272101-80272120 | None:intergenic | 50.0% | |
| !!! | TTTTCAGGGGAGTGTCCTTC+TGG | + | chr4_1:80272247-80272266 | Msa0576200:CDS | 50.0% |
| !! | TTTCAGGGGAGTGTCCTTCT+GGG | + | chr4_1:80272248-80272267 | Msa0576200:CDS | 50.0% |
| TTGGTCTCTCTATCCCCAGA+AGG | - | chr4_1:80272265-80272284 | None:intergenic | 50.0% | |
| TCTGGGGATAGAGAGACCAA+TGG | + | chr4_1:80272265-80272284 | Msa0576200:CDS | 50.0% | |
| GATTGTGTGTGGTCCATGTG+AGG | + | chr4_1:80272378-80272397 | Msa0576200:CDS | 50.0% | |
| AGCCTTTCCTGAAGAACCTG+AGG | + | chr4_1:80272408-80272427 | Msa0576200:CDS | 50.0% | |
| CTCCTCAGGTTCTTCAGGAA+AGG | - | chr4_1:80272413-80272432 | None:intergenic | 50.0% | |
| TCAAGCTCCTCAGGTTCTTC+AGG | - | chr4_1:80272418-80272437 | None:intergenic | 50.0% | |
| GGACTCTACAAAGTCTGCAG+TGG | + | chr4_1:80272501-80272520 | Msa0576200:CDS | 50.0% | |
| ATACTCTAATGGGGGCTTGG+AGG | + | chr4_1:80272573-80272592 | Msa0576200:CDS | 50.0% | |
| TCTGTCACACAGTGCCTTTG+GGG | + | chr4_1:80273458-80273477 | Msa0576200:intron | 50.0% | |
| AAGGGCTTAATTGCCCCCAA+AGG | - | chr4_1:80273475-80273494 | None:intergenic | 50.0% | |
| AATGGAGCTGTAAGCTCAGC+AGG | - | chr4_1:80273592-80273611 | None:intergenic | 50.0% | |
| CTAATAAGAGGCTTCCGCTG+TGG | - | chr4_1:80273640-80273659 | None:intergenic | 50.0% | |
| CACAGCGGAAGCCTCTTATT+AGG | + | chr4_1:80273638-80273657 | Msa0576200:CDS | 50.0% | |
| ACCGAGCCGATCTCATTGAG+CGG | + | chr4_1:80268294-80268313 | Msa0576200:CDS | 55.0% | |
| TCCGCTCAATGAGATCGGCT+CGG | - | chr4_1:80268298-80268317 | None:intergenic | 55.0% | |
| !! | CGCCGGCTTGTATGAGAATC+AGG | + | chr4_1:80268470-80268489 | Msa0576200:CDS | 55.0% |
| ! | GGGTGCAACTCTGTCACTTC+TGG | - | chr4_1:80269507-80269526 | None:intergenic | 55.0% |
| GGAACATGAGCATCAGGCAC+TGG | - | chr4_1:80269528-80269547 | None:intergenic | 55.0% | |
| ATATGTCACGGGCAGGTTGC+AGG | + | chr4_1:80270145-80270164 | Msa0576200:intron | 55.0% | |
| ! | GGGCAGGTTGCAGGTTTTCT+TGG | + | chr4_1:80270154-80270173 | Msa0576200:intron | 55.0% |
| ! | TTTTAGCCGCGTTCCCTCAG+AGG | + | chr4_1:80271220-80271239 | Msa0576200:CDS | 55.0% |
| GGAGTTCCTGCCAAAGAAGG+CGG | + | chr4_1:80271770-80271789 | Msa0576200:CDS | 55.0% | |
| GCGTACACGCAATGGAAACC+TGG | + | chr4_1:80271842-80271861 | Msa0576200:CDS | 55.0% | |
| GCGGCATTTCACATGGGAGA+TGG | - | chr4_1:80271879-80271898 | None:intergenic | 55.0% | |
| CCACCGGGAAATACAAAGGC+GGG | - | chr4_1:80271908-80271927 | None:intergenic | 55.0% | |
| TGAACGTCGCTTACTCACCC+AGG | - | chr4_1:80271960-80271979 | None:intergenic | 55.0% | |
| GAGGCAGAGAGGAAAAGGAC+TGG | - | chr4_1:80272102-80272121 | None:intergenic | 55.0% | |
| AGAGGGAGGCAGAGAGGAAA+AGG | - | chr4_1:80272107-80272126 | None:intergenic | 55.0% | |
| TGAACATCCCTGCTAGAGGG+AGG | - | chr4_1:80272121-80272140 | None:intergenic | 55.0% | |
| !! | TTCAGGGGAGTGTCCTTCTG+GGG | + | chr4_1:80272249-80272268 | Msa0576200:CDS | 55.0% |
| CTGTCACACAGTGCCTTTGG+GGG | + | chr4_1:80273459-80273478 | Msa0576200:intron | 55.0% | |
| ! | GTCAGCAGTTTTCCCCAAGG+AGG | - | chr4_1:80273820-80273839 | None:intergenic | 55.0% |
| CTGAAAGGAACGTGGAGCGG+AGG | - | chr4_1:80267594-80267613 | None:intergenic | 60.0% | |
| TGCTGCGATTAGAGCCGTCG+AGG | - | chr4_1:80267828-80267847 | None:intergenic | 60.0% | |
| TTTGGCGCTGCCCGATATCG+CGG | - | chr4_1:80268263-80268282 | None:intergenic | 60.0% | |
| ATCGGGCAGCGCCAAAGGTT+AGG | + | chr4_1:80268267-80268286 | Msa0576200:CDS | 60.0% | |
| TCGGGCAGCGCCAAAGGTTA+GGG | + | chr4_1:80268268-80268287 | Msa0576200:CDS | 60.0% | |
| CTTCTCGAGCTCACGCGTCT+TGG | - | chr4_1:80268340-80268359 | None:intergenic | 60.0% | |
| CAAGACGCGTGAGCTCGAGA+AGG | + | chr4_1:80268338-80268357 | Msa0576200:CDS | 60.0% | |
| !! | GTAGGGAGGAAGTGCTTGGC+AGG | + | chr4_1:80268505-80268524 | Msa0576200:CDS | 60.0% |
| AGTGCTTGGCAGGCTAGACC+AGG | + | chr4_1:80268515-80268534 | Msa0576200:CDS | 60.0% | |
| CTTGGCAGGCTAGACCAGGT+TGG | + | chr4_1:80268519-80268538 | Msa0576200:intron | 60.0% | |
| ! | AGGACCGGGAGGTGGTTTGT+AGG | - | chr4_1:80271155-80271174 | None:intergenic | 60.0% |
| ACGACTGGGGCAACAAGGAC+CGG | - | chr4_1:80271170-80271189 | None:intergenic | 60.0% | |
| GATGCACGACTGGGGCAACA+AGG | - | chr4_1:80271175-80271194 | None:intergenic | 60.0% | |
| CCCGCCTTTGTATTTCCCGG+TGG | + | chr4_1:80271905-80271924 | Msa0576200:CDS | 60.0% | |
| GAGCTTAGGGTTTCCGGCCA+TGG | + | chr4_1:80271980-80271999 | Msa0576200:CDS | 60.0% | |
| CTCTCTGCCTCCCTCTAGCA+GGG | + | chr4_1:80272111-80272130 | Msa0576200:CDS | 60.0% | |
| ATCCAGCACCAGTGCCACAG+CGG | + | chr4_1:80273623-80273642 | Msa0576200:CDS | 60.0% | |
| GCGATATCGGGCAGCGCCAA+AGG | + | chr4_1:80268262-80268281 | Msa0576200:CDS | 65.0% | |
| CGACTGGGGCAACAAGGACC+GGG | - | chr4_1:80271169-80271188 | None:intergenic | 65.0% | |
| AGCCGCGTTCCCTCAGAGGT+TGG | + | chr4_1:80271224-80271243 | Msa0576200:intron | 65.0% | |
| ! | GGCCAACCTCTGAGGGAACG+CGG | - | chr4_1:80271229-80271248 | None:intergenic | 65.0% |
| CCTGCTAGAGGGAGGCAGAG+AGG | - | chr4_1:80272113-80272132 | None:intergenic | 65.0% | |
| CCTCTCTGCCTCCCTCTAGC+AGG | + | chr4_1:80272110-80272129 | Msa0576200:CDS | 65.0% | |
| TGGGGGCTTGGAGGAGCTTG+AGG | + | chr4_1:80272582-80272601 | Msa0576200:CDS | 65.0% | |
| !! | TTCCGCTGTGGCACTGGTGC+TGG | - | chr4_1:80273628-80273647 | None:intergenic | 65.0% |
| AGAGGCTTCCGCTGTGGCAC+TGG | - | chr4_1:80273634-80273653 | None:intergenic | 65.0% | |
| GGGCAACAAGGACCGGGAGG+TGG | - | chr4_1:80271163-80271182 | None:intergenic | 70.0% | |
| CTGGGGCAACAAGGACCGGG+AGG | - | chr4_1:80271166-80271185 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 80267544 | 80274086 | 80267544 | ID=Msa0576200;Name=Msa0576200 |
| chr4_1 | mRNA | 80267544 | 80274086 | 80267544 | ID=Msa0576200-mRNA-1;Parent=Msa0576200;Name=Msa0576200-mRNA-1;_AED=0.19;_eAED=0.19;_QI=617|0.64|0.8|1|0.92|0.86|15|235|819 |
| chr4_1 | exon | 80267544 | 80267647 | 80267544 | ID=Msa0576200-mRNA-1:exon:28641;Parent=Msa0576200-mRNA-1 |
| chr4_1 | exon | 80267724 | 80268359 | 80267724 | ID=Msa0576200-mRNA-1:exon:28642;Parent=Msa0576200-mRNA-1 |
| chr4_1 | exon | 80268459 | 80268536 | 80268459 | ID=Msa0576200-mRNA-1:exon:28643;Parent=Msa0576200-mRNA-1 |
| chr4_1 | exon | 80268896 | 80269003 | 80268896 | ID=Msa0576200-mRNA-1:exon:28644;Parent=Msa0576200-mRNA-1 |
| chr4_1 | exon | 80269307 | 80269369 | 80269307 | ID=Msa0576200-mRNA-1:exon:28645;Parent=Msa0576200-mRNA-1 |
| chr4_1 | exon | 80269462 | 80269623 | 80269462 | ID=Msa0576200-mRNA-1:exon:28646;Parent=Msa0576200-mRNA-1 |
| chr4_1 | exon | 80269768 | 80269881 | 80269768 | ID=Msa0576200-mRNA-1:exon:28647;Parent=Msa0576200-mRNA-1 |
| chr4_1 | exon | 80269969 | 80270070 | 80269969 | ID=Msa0576200-mRNA-1:exon:28648;Parent=Msa0576200-mRNA-1 |
| chr4_1 | exon | 80270160 | 80270489 | 80270160 | ID=Msa0576200-mRNA-1:exon:28649;Parent=Msa0576200-mRNA-1 |
| chr4_1 | exon | 80271143 | 80271241 | 80271143 | ID=Msa0576200-mRNA-1:exon:28650;Parent=Msa0576200-mRNA-1 |
| chr4_1 | exon | 80271331 | 80271495 | 80271331 | ID=Msa0576200-mRNA-1:exon:28651;Parent=Msa0576200-mRNA-1 |
| chr4_1 | exon | 80271659 | 80272603 | 80271659 | ID=Msa0576200-mRNA-1:exon:28652;Parent=Msa0576200-mRNA-1 |
| chr4_1 | exon | 80272717 | 80272770 | 80272717 | ID=Msa0576200-mRNA-1:exon:28653;Parent=Msa0576200-mRNA-1 |
| chr4_1 | exon | 80273589 | 80273659 | 80273589 | ID=Msa0576200-mRNA-1:exon:28654;Parent=Msa0576200-mRNA-1 |
| chr4_1 | exon | 80273806 | 80274086 | 80273806 | ID=Msa0576200-mRNA-1:exon:28655;Parent=Msa0576200-mRNA-1 |
| chr4_1 | five_prime_UTR | 80267544 | 80267647 | 80267544 | ID=Msa0576200-mRNA-1:five_prime_utr;Parent=Msa0576200-mRNA-1 |
| chr4_1 | five_prime_UTR | 80267724 | 80268236 | 80267724 | ID=Msa0576200-mRNA-1:five_prime_utr;Parent=Msa0576200-mRNA-1 |
| chr4_1 | CDS | 80268237 | 80268359 | 80268237 | ID=Msa0576200-mRNA-1:cds;Parent=Msa0576200-mRNA-1 |
| chr4_1 | CDS | 80268459 | 80268536 | 80268459 | ID=Msa0576200-mRNA-1:cds;Parent=Msa0576200-mRNA-1 |
| chr4_1 | CDS | 80268896 | 80269003 | 80268896 | ID=Msa0576200-mRNA-1:cds;Parent=Msa0576200-mRNA-1 |
| chr4_1 | CDS | 80269307 | 80269369 | 80269307 | ID=Msa0576200-mRNA-1:cds;Parent=Msa0576200-mRNA-1 |
| chr4_1 | CDS | 80269462 | 80269623 | 80269462 | ID=Msa0576200-mRNA-1:cds;Parent=Msa0576200-mRNA-1 |
| chr4_1 | CDS | 80269768 | 80269881 | 80269768 | ID=Msa0576200-mRNA-1:cds;Parent=Msa0576200-mRNA-1 |
| chr4_1 | CDS | 80269969 | 80270070 | 80269969 | ID=Msa0576200-mRNA-1:cds;Parent=Msa0576200-mRNA-1 |
| chr4_1 | CDS | 80270160 | 80270489 | 80270160 | ID=Msa0576200-mRNA-1:cds;Parent=Msa0576200-mRNA-1 |
| chr4_1 | CDS | 80271143 | 80271241 | 80271143 | ID=Msa0576200-mRNA-1:cds;Parent=Msa0576200-mRNA-1 |
| chr4_1 | CDS | 80271331 | 80271495 | 80271331 | ID=Msa0576200-mRNA-1:cds;Parent=Msa0576200-mRNA-1 |
| chr4_1 | CDS | 80271659 | 80272603 | 80271659 | ID=Msa0576200-mRNA-1:cds;Parent=Msa0576200-mRNA-1 |
| chr4_1 | CDS | 80272717 | 80272770 | 80272717 | ID=Msa0576200-mRNA-1:cds;Parent=Msa0576200-mRNA-1 |
| chr4_1 | CDS | 80273589 | 80273659 | 80273589 | ID=Msa0576200-mRNA-1:cds;Parent=Msa0576200-mRNA-1 |
| chr4_1 | CDS | 80273806 | 80273851 | 80273806 | ID=Msa0576200-mRNA-1:cds;Parent=Msa0576200-mRNA-1 |
| chr4_1 | three_prime_UTR | 80273852 | 80274086 | 80273852 | ID=Msa0576200-mRNA-1:three_prime_utr;Parent=Msa0576200-mRNA-1 |
| Gene Sequence |
| Protein sequence |