AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1261250


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1261250 MtrunA17_Chr4g0062931 93.416 562 17 4 1 549 1 555 0.0 857
Msa1261250 MtrunA17_Chr5g0429721 32.911 79 52 1 5 82 34 112 1.51e-12 69.3
Msa1261250 MtrunA17_Chr1g0210241 35.955 89 56 1 1 88 1 89 7.09e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1261250 AT5G19960.1 42.632 190 70 6 1 189 1 152 1.14e-32 128
Msa1261250 AT5G19960.1 41.379 116 66 1 425 540 221 334 1.35e-15 78.6
Msa1261250 AT5G19960.2 41.379 116 66 1 425 540 133 246 6.56e-16 78.2
Msa1261250 AT4G39260.3 43.373 83 46 1 10 91 9 91 5.89e-15 70.9
Msa1261250 AT3G47120.2 39.474 76 45 1 5 79 34 109 3.36e-13 70.9
Msa1261250 AT3G47120.1 39.474 76 45 1 5 79 34 109 5.23e-13 70.9

Find 153 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCCGTGTGGTTAAAGTTAA+TGG 0.201362 8_2:+63567734 Msa1261250:CDS
GTTATGAATCAGACTATTAA+TGG 0.247320 8_2:+63567713 Msa1261250:intron
GGTGGTGGCAGATCAAATTT+TGG 0.252328 8_2:+63567788 Msa1261250:CDS
TCCTATCTCTGTCACGGTCT+CGG 0.309537 8_2:-63568399 None:intergenic
CGCACTGTCTTCAATTTGTA+TGG 0.310277 8_2:+63567323 Msa1261250:CDS
GGGAAGACCACCAACGTAAA+TGG 0.322442 8_2:-63567276 None:intergenic
GGTGGAGGTGGCGGTGGTGG+TGG 0.340367 8_2:+63567773 Msa1261250:CDS
GAGTGAAGTAAATATCAATT+TGG 0.351067 8_2:+63567150 None:intergenic
GGCGGTGGAGGTGGCGGTGG+TGG 0.354294 8_2:+63567770 Msa1261250:CDS
CCCTATCCCTGTCACGGTCT+CGG 0.354327 8_2:-63568120 None:intergenic
CATTACCATGATCATAATCT+TGG 0.358631 8_2:-63567895 None:intergenic
CCCTATTCCTATCATGGTCT+CGG 0.364486 8_2:-63568213 None:intergenic
GTGAGGTCTCGTGGCGGTGG+AGG 0.372910 8_2:+63567758 Msa1261250:CDS
ATTGGAATCATGACGGTGAT+AGG 0.374936 8_2:+63568581 Msa1261250:CDS
TGTATGGTAAGATTCATCTT+TGG 0.384035 8_2:+63570940 Msa1261250:three_prime_UTR
CCCGAGACCATGATAGGAAT+AGG 0.387868 8_2:+63568212 Msa1261250:CDS
ATAGGTCTCGAGACCATGAT+AGG 0.390177 8_2:+63568020 Msa1261250:CDS
CCCTGTCACGGTCACGGTCT+CGG 0.400331 8_2:-63568306 None:intergenic
CTTACAAATGGAAGTCTAGA+TGG 0.403989 8_2:+63570812 Msa1261250:CDS
TTAGCATGTGGCATCTTACC+TGG 0.405355 8_2:+63571074 Msa1261250:three_prime_UTR
AGGTCTCGTGGCGGTGGAGG+TGG 0.410261 8_2:+63567761 Msa1261250:CDS
ATGATGAAAGGAATGGAGAT+TGG 0.413487 8_2:+63567840 Msa1261250:CDS
CCTGTCACGGTCACGGTCTC+GGG 0.417238 8_2:-63568305 None:intergenic
GCCGTGTGGTTAAAGTTAAT+GGG 0.420536 8_2:+63567735 Msa1261250:CDS
AAAGCGTGTTAGACCGTGAT+AGG 0.423664 8_2:+63568281 Msa1261250:CDS
CGTGGCGGTGGAGGTGGCGG+TGG 0.426158 8_2:+63567767 Msa1261250:CDS
AGAAAGAAGACTTAATGTTA+TGG 0.428868 8_2:+63569438 Msa1261250:CDS
AAAGCATGTTAGATGATGAT+TGG 0.430802 8_2:+63568563 Msa1261250:CDS
CCTATCTCTGTCACGGTCTC+GGG 0.431431 8_2:-63568398 None:intergenic
CCCGAGACCGTGACCGTGAC+AGG 0.432306 8_2:+63568305 Msa1261250:CDS
TTCTAAGCTGGAAGAGGGAT+TGG 0.434291 8_2:+63569414 Msa1261250:CDS
TTACCTTGGTCAACTGCATC+TGG 0.438734 8_2:-63569645 None:intergenic
TCTCGTGGCGGTGGAGGTGG+CGG 0.438886 8_2:+63567764 Msa1261250:CDS
AAGATTATAGCAATGCTTGT+TGG 0.439117 8_2:-63571013 None:intergenic
CCTATCCCTGTCACGGTCTC+GGG 0.441091 8_2:-63568119 None:intergenic
CAAGCTAGAGCAAGTATGTT+AGG 0.441358 8_2:+63568178 Msa1261250:CDS
GGTGATGGTGATGGTGGTCT+TGG 0.448887 8_2:+63570785 Msa1261250:CDS
ATCAATGACCAACGTACACT+TGG 0.451190 8_2:+63567506 Msa1261250:CDS
CCGAGACCATGATAGGAATA+GGG 0.451847 8_2:+63568213 Msa1261250:CDS
AAAGCATGTTAGTCCGTGAT+AGG 0.455542 8_2:+63568095 Msa1261250:CDS
AACCATGATGTCACGGTCTC+GGG 0.456700 8_2:-63568491 None:intergenic
GGGGTGAGGTCTCGTGGCGG+TGG 0.457192 8_2:+63567755 Msa1261250:CDS
TTCTATCCCTATTCCTATCA+TGG 0.457624 8_2:-63568219 None:intergenic
GGAGTTACAAAAGCACTCTA+AGG 0.459318 8_2:+63569459 Msa1261250:CDS
GAGACCGTGACATCATGGTT+AGG 0.463473 8_2:+63568494 Msa1261250:CDS
TGATAGGGCTGAAAATGAAC+TGG 0.463823 8_2:+63568597 Msa1261250:CDS
GACTAGAATGGAATTTGAAA+AGG 0.465301 8_2:-63571152 None:intergenic
TGATGAAAGGAATGGAGATT+GGG 0.465545 8_2:+63567841 Msa1261250:CDS
CTCATCATTGTGGTCCCCAT+TGG 0.467282 8_2:-63568897 None:intergenic
CCCGAGACCGTGACAGAGAT+AGG 0.470681 8_2:+63568398 Msa1261250:CDS
CGAGACCAAGATTATGATCA+TGG 0.478575 8_2:+63567890 Msa1261250:CDS
AGAGGTCTCGAGACCGTGAT+AGG 0.480387 8_2:+63567984 Msa1261250:CDS
GTAATGAGAAAGATGGATAC+AGG 0.480470 8_2:+63567912 Msa1261250:CDS
AAAGATGGATACAGGAATAG+AGG 0.481913 8_2:+63567920 Msa1261250:CDS
ACAGGAATAGAGGCAGTGAT+TGG 0.482052 8_2:+63567930 Msa1261250:CDS
ATAGTCCATCAGATTCCAAT+GGG 0.482340 8_2:+63568882 Msa1261250:CDS
CCCGAGACCGTGACAGGGAT+AGG 0.483596 8_2:+63568119 Msa1261250:CDS
TGTTTCATCAGTGGCGTCGA+AGG 0.487655 8_2:-63567297 None:intergenic
TTCTATCCCTATCCCTATCA+TGG 0.488329 8_2:-63568033 None:intergenic
ACTGGAAAACAGCAGGGTAC+AGG 0.494266 8_2:+63568615 Msa1261250:CDS
ATAGATCCCGAGACCATGAT+AGG 0.494649 8_2:+63568206 Msa1261250:CDS
ATAGGTCCCGAGACCGTGAC+AGG 0.495188 8_2:+63568113 Msa1261250:CDS
CCTATTCCTATCATGGTCTC+GGG 0.495816 8_2:-63568212 None:intergenic
TCGAGTCCAATCACCACCTC+TGG 0.499545 8_2:-63567954 None:intergenic
ATTGGACCAGAGGTGGTGAT+TGG 0.502244 8_2:+63567948 Msa1261250:CDS
TAACCATGATGTCACGGTCT+CGG 0.507957 8_2:-63568492 None:intergenic
GGTCTTGGACAACTTACAAA+TGG 0.508402 8_2:+63570800 Msa1261250:CDS
ACAGGGTGGAGATGTGGATA+AGG 0.508614 8_2:+63568633 Msa1261250:CDS
AGACCGTGACATCATGGTTA+GGG 0.509461 8_2:+63568495 Msa1261250:CDS
CATCATAATGATGAAAGGAA+TGG 0.517662 8_2:+63567833 Msa1261250:CDS
CACGGTCTCGGGACCTATCA+CGG 0.518091 8_2:-63568294 None:intergenic
AAAATGAACTGGAAAACAGC+AGG 0.521165 8_2:+63568608 Msa1261250:CDS
CTCGAGACCATGATAGGGAT+AGG 0.523344 8_2:+63568026 Msa1261250:CDS
GAAAGCATGTTAGATTGTGA+TGG 0.525220 8_2:+63568373 Msa1261250:CDS
TTGTAACTTTCACAAACCCT+AGG 0.525397 8_2:+63567543 Msa1261250:CDS
TAGCATCAATTGCAGACCTA+GGG 0.528965 8_2:-63567559 None:intergenic
CACGGTCTCGGGACCTATCA+CGG 0.531377 8_2:-63568108 None:intergenic
GATAGCTCCATTTACGTTGG+TGG 0.531498 8_2:+63567269 Msa1261250:CDS
GATCATGGTAATGAGAAAGA+TGG 0.531558 8_2:+63567905 Msa1261250:CDS
TATCTCACTAGCTCCATGTA+TGG 0.533587 8_2:+63570924 Msa1261250:three_prime_UTR
CTGGATCCACATCTAAGTTA+CGG 0.535060 8_2:-63568657 None:intergenic
TTCTATCCCTATCCCTGTCA+CGG 0.535901 8_2:-63568126 None:intergenic
TCAGGTTTCTAAGCTGGAAG+AGG 0.536137 8_2:+63569408 Msa1261250:intron
CCGAGACCGTGACAGGGATA+GGG 0.537071 8_2:+63568120 Msa1261250:CDS
AGAGTGAAGGAGAAAGACTA+TGG 0.541578 8_2:+63567182 Msa1261250:five_prime_UTR
CTCGAGACCTATCACGGTCG+CGG 0.542402 8_2:-63568009 None:intergenic
CTGGAAAACAGCAGGGTACA+GGG 0.545302 8_2:+63568616 Msa1261250:CDS
CAGGTTTCTAAGCTGGAAGA+GGG 0.546464 8_2:+63569409 Msa1261250:intron
AAGATGAATCTTACCATACA+TGG 0.547436 8_2:-63570937 None:intergenic
TTCTGCTCCTATCTCTGTCA+CGG 0.549894 8_2:-63568405 None:intergenic
GAGCATATGCAAAATTATGA+TGG 0.550227 8_2:+63568061 Msa1261250:CDS
GTCCCGAGACCGTGACATCA+TGG 0.550463 8_2:+63568489 Msa1261250:CDS
ATAGCATCAATTGCAGACCT+AGG 0.550720 8_2:-63567560 None:intergenic
GACTACCTTGACATCAAGAA+TGG 0.552219 8_2:-63567348 None:intergenic
AGAAGAGTTGAGCATTTGCA+AGG 0.555050 8_2:+63568424 Msa1261250:CDS
TTATACCCCTGTCACGGTCA+CGG 0.557856 8_2:-63568312 None:intergenic
CCCCATTAACTTTAACCACA+CGG 0.561289 8_2:-63567736 None:intergenic
CAGGGTACAGGGTGGAGATG+TGG 0.563252 8_2:+63568627 Msa1261250:CDS
AAAGCATGTTAGACCGCGAT+GGG 0.565934 8_2:+63568467 Msa1261250:CDS
GAACACATGCTAGATTATGA+TGG 0.568841 8_2:+63568154 Msa1261250:CDS
CTTAAAATAAATTTAGCATG+TGG 0.570966 8_2:+63571062 Msa1261250:three_prime_UTR
GAAATTCATACTATATTGTG+CGG 0.571168 8_2:+63570971 Msa1261250:three_prime_UTR
CATGGTCTCGGGATCTATCA+CGG 0.573329 8_2:-63568201 None:intergenic
TGGTCCCCATTGGAATCTGA+TGG 0.575643 8_2:-63568887 None:intergenic
GTTTCATCAGTGGCGTCGAA+GGG 0.576277 8_2:-63567296 None:intergenic
TGGTTAAAGTTAATGGGGTG+AGG 0.576628 8_2:+63567741 Msa1261250:CDS
TCTTACTCGATGTTTCTCCT+CGG 0.578233 8_2:-63568742 None:intergenic
ATTATCATCATAATGATGAA+AGG 0.578991 8_2:+63567828 Msa1261250:CDS
AATAGTCCATCAGATTCCAA+TGG 0.582473 8_2:+63568881 Msa1261250:CDS
AGGAATGGAGATTGGGATCG+TGG 0.582856 8_2:+63567848 Msa1261250:CDS
TCGAGACCATGATAGGGATA+GGG 0.583018 8_2:+63568027 Msa1261250:CDS
GAAAGCATGTTAGACCGCGA+TGG 0.583363 8_2:+63568466 Msa1261250:CDS
TAGCATGTGGCATCTTACCT+GGG 0.585228 8_2:+63571075 Msa1261250:three_prime_UTR
TGGCGCCATTCTTGATGTCA+AGG 0.589109 8_2:+63567343 Msa1261250:CDS
CATGGTCTCGAGACCTATCA+CGG 0.589442 8_2:-63568015 None:intergenic
GTTAATGGGGTGAGGTCTCG+TGG 0.592393 8_2:+63567749 Msa1261250:CDS
TTGGAATCATGACGGTGATA+GGG 0.593640 8_2:+63568582 Msa1261250:CDS
GGCAGTGATTGGACCAGAGG+TGG 0.596616 8_2:+63567941 Msa1261250:CDS
CCGAGACCGTGACCGTGACA+GGG 0.596911 8_2:+63568306 Msa1261250:CDS
AAAGCATGTTAGATTGTGAT+GGG 0.597103 8_2:+63568374 Msa1261250:CDS
ATTGGACTCGACAGCATCAG+AGG 0.597239 8_2:+63567966 Msa1261250:CDS
GAGAGTGACGGTGATGGTGA+TGG 0.598421 8_2:+63570776 Msa1261250:CDS
TTGTCTCTTTAATTGCCTAG+TGG 0.600658 8_2:+63570894 Msa1261250:three_prime_UTR
TCAATGACCAACGTACACTT+GGG 0.603480 8_2:+63567507 Msa1261250:CDS
TCAATATTGTTCGAGAGTGA+CGG 0.605658 8_2:+63570764 Msa1261250:CDS
AGTGCGAATTGTTTCATCAG+TGG 0.616718 8_2:-63567306 None:intergenic
TAAGGACCGTAACTTAGATG+TGG 0.622168 8_2:+63568651 Msa1261250:CDS
TCAGTTCCACAAAATGACAC+TGG 0.624699 8_2:+63567241 Msa1261250:exon
AGAGGCAGTGATTGGACCAG+AGG 0.630012 8_2:+63567938 Msa1261250:CDS
AGCATTTCCCAAGTGTACGT+TGG 0.632194 8_2:-63567514 None:intergenic
GATGCTATCAACGATATGAA+CGG 0.633466 8_2:+63567575 Msa1261250:CDS
TATCCCTAACCATGATGTCA+CGG 0.634194 8_2:-63568498 None:intergenic
ATCACATTACCTCATCATTG+TGG 0.638871 8_2:-63568907 None:intergenic
TAGGTCTCGAGACCATGATA+GGG 0.644021 8_2:+63568021 Msa1261250:CDS
CACGGTCTCGGGACCCATCG+CGG 0.649874 8_2:-63568480 None:intergenic
AGTGACGGTGATGGTGATGG+TGG 0.650592 8_2:+63570779 Msa1261250:CDS
GATGATAGCTCCATTTACGT+TGG 0.659955 8_2:+63567266 Msa1261250:CDS
AGGTAGAAGATGAATTAGAG+AGG 0.662402 8_2:+63569066 Msa1261250:intron
CGAGACCGTGACCGTGACAG+GGG 0.664208 8_2:+63568307 Msa1261250:CDS
CAATGGGGACCACAATGATG+AGG 0.667084 8_2:+63568898 Msa1261250:CDS
TCGCCAGATGCAGTTGACCA+AGG 0.667948 8_2:+63569642 Msa1261250:CDS
TTGTTCGAGAGTGACGGTGA+TGG 0.673128 8_2:+63570770 Msa1261250:CDS
AAATGAACTGGAAAACAGCA+GGG 0.689851 8_2:+63568609 Msa1261250:CDS
ATATTTACCGCAGAAACGGG+AGG 0.695680 8_2:+63569585 Msa1261250:intron
AATGGGGTGAGGTCTCGTGG+CGG 0.699964 8_2:+63567752 Msa1261250:CDS
GATGATGATTGGAATCATGA+CGG 0.709264 8_2:+63568574 Msa1261250:CDS
TAGGTCCCGAGACCGTGACA+GGG 0.714552 8_2:+63568114 Msa1261250:CDS
CCGTGTGGTTAAAGTTAATG+GGG 0.715692 8_2:+63567736 Msa1261250:CDS
TCAGACTATTAATGGCCGTG+TGG 0.721965 8_2:+63567721 Msa1261250:intron
AATGGAGATTGGGATCGTGG+CGG 0.727702 8_2:+63567851 Msa1261250:CDS
GCAATTAAAGAGACAACACA+TGG 0.728798 8_2:-63570887 None:intergenic
GAAAACAGCAGGGTACAGGG+TGG 0.744053 8_2:+63568619 Msa1261250:CDS
TAGTCCATCAGATTCCAATG+GGG 0.775487 8_2:+63568883 Msa1261250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATTAAATAATTAACAA+GGG - chr8_2:63567410-63567429 None:intergenic 10.0%
!! AAGAAATTAAATAATTAACA+AGG - chr8_2:63567411-63567430 None:intergenic 10.0%
!! TAATAATCAATTCAAGTAAT+TGG + chr8_2:63567435-63567454 Msa1261250:intron 15.0%
!! AATAATCAATTCAAGTAATT+GGG + chr8_2:63567436-63567455 Msa1261250:intron 15.0%
!! AAACTAAAATGAATGAATAA+TGG + chr8_2:63569138-63569157 Msa1261250:intron 15.0%
!! TTATCAAACATTCAAATATT+GGG - chr8_2:63569273-63569292 None:intergenic 15.0%
!! TTTATCAAACATTCAAATAT+TGG - chr8_2:63569274-63569293 None:intergenic 15.0%
!!! AAATATAACTTTTTGGAAAA+GGG - chr8_2:63570136-63570155 None:intergenic 15.0%
!!! AAAATATAACTTTTTGGAAA+AGG - chr8_2:63570137-63570156 None:intergenic 15.0%
!! AGTTTATTTGTGTTAATGTT+TGG + chr8_2:63567636-63567655 Msa1261250:intron 20.0%
!! ATTATCATCATAATGATGAA+AGG + chr8_2:63567828-63567847 Msa1261250:CDS 20.0%
!! GTAAAAACAAGATTAAAATG+TGG - chr8_2:63569029-63569048 None:intergenic 20.0%
!!! ATAATGGAAATTTGTCAATA+TGG + chr8_2:63569154-63569173 Msa1261250:intron 20.0%
!! TAAATGATATTGCTAACATT+GGG + chr8_2:63569705-63569724 Msa1261250:intron 20.0%
!! TAAACATTATAAAAAGTCAC+AGG - chr8_2:63569879-63569898 None:intergenic 20.0%
!! AATGTTTAAATTTCACAATG+TGG + chr8_2:63569891-63569910 Msa1261250:intron 20.0%
!!! AATATAACTTTTTGGAAAAG+GGG - chr8_2:63570135-63570154 None:intergenic 20.0%
!!! TTGATTTTCTAATCATTCAT+AGG - chr8_2:63570329-63570348 None:intergenic 20.0%
!! AAACATTGCTTAAAATAATG+TGG - chr8_2:63570354-63570373 None:intergenic 20.0%
!! CTTAAAATAAATTTAGCATG+TGG + chr8_2:63571062-63571081 Msa1261250:three_prime_UTR 20.0%
!!! AAGAAATTTTTAATCAATCC+AGG - chr8_2:63571122-63571141 None:intergenic 20.0%
!! ATGTTTGGTAATTATTGTTG+TGG + chr8_2:63567651-63567670 Msa1261250:intron 25.0%
! GTTATGAATCAGACTATTAA+TGG + chr8_2:63567713-63567732 Msa1261250:intron 25.0%
!! TTTTTCTCCTTTTTATGTGT+TGG + chr8_2:63569362-63569381 Msa1261250:intron 25.0%
! AGAAAGAAGACTTAATGTTA+TGG + chr8_2:63569438-63569457 Msa1261250:CDS 25.0%
! TTAAAACTTAGACATTACCT+TGG - chr8_2:63569662-63569681 None:intergenic 25.0%
! GTAAATGATATTGCTAACAT+TGG + chr8_2:63569704-63569723 Msa1261250:intron 25.0%
! ATATATATAAGACACAAACC+TGG - chr8_2:63569816-63569835 None:intergenic 25.0%
!! CCATGGAAAATATAACTTTT+TGG - chr8_2:63570143-63570162 None:intergenic 25.0%
!! CCAAAAAGTTATATTTTCCA+TGG + chr8_2:63570140-63570159 Msa1261250:intron 25.0%
! TAATTTCAGAGATATTTCCA+TGG - chr8_2:63570160-63570179 None:intergenic 25.0%
! CATTAATTAAGCTCCATAAA+GGG + chr8_2:63570375-63570394 Msa1261250:intron 25.0%
! ATTAATTAAGCTCCATAAAG+GGG + chr8_2:63570376-63570395 Msa1261250:intron 25.0%
!!! TTTTATTTTAGACCCCTTTA+TGG - chr8_2:63570391-63570410 None:intergenic 25.0%
! AAGAAAAACAAGAAATAAGC+TGG - chr8_2:63570666-63570685 None:intergenic 25.0%
!! TATGCTGAGTTAATTTTTGT+TGG + chr8_2:63570722-63570741 Msa1261250:intron 25.0%
!! TTTCATACTTTTGGTATTTC+TGG - chr8_2:63570856-63570875 None:intergenic 25.0%
!! CAAAAATGGTTTCATACTTT+TGG - chr8_2:63570865-63570884 None:intergenic 25.0%
! GAAATTCATACTATATTGTG+CGG + chr8_2:63570971-63570990 Msa1261250:three_prime_UTR 25.0%
! GGTTATGATTTGAGAGTTTT+TGG + chr8_2:63567677-63567696 Msa1261250:intron 30.0%
CATCATAATGATGAAAGGAA+TGG + chr8_2:63567833-63567852 Msa1261250:CDS 30.0%
CATTACCATGATCATAATCT+TGG - chr8_2:63567898-63567917 None:intergenic 30.0%
GAGCATATGCAAAATTATGA+TGG + chr8_2:63568061-63568080 Msa1261250:CDS 30.0%
AAAGCATGTTAGATTGTGAT+GGG + chr8_2:63568374-63568393 Msa1261250:CDS 30.0%
AAAGCATGTTAGATGATGAT+TGG + chr8_2:63568563-63568582 Msa1261250:CDS 30.0%
! TGTTCGTCAAAACTTTTATC+AGG - chr8_2:63568709-63568728 None:intergenic 30.0%
AACATAAAAAAGAACAACCG+AGG + chr8_2:63568725-63568744 Msa1261250:CDS 30.0%
ATGTCACAGAAAATTAACAG+AGG - chr8_2:63568771-63568790 None:intergenic 30.0%
GTTAATTTCCAACTGTTCTT+TGG + chr8_2:63568793-63568812 Msa1261250:intron 30.0%
TAAGTAAACCAAAGAACAGT+TGG - chr8_2:63568804-63568823 None:intergenic 30.0%
!!! CTTGTTTTTACTTGCTTTTG+TGG + chr8_2:63569038-63569057 Msa1261250:intron 30.0%
ACTGCTTGATCAACTAAAAA+AGG + chr8_2:63569097-63569116 Msa1261250:CDS 30.0%
GAATGTTTGATAAATGCGTT+AGG + chr8_2:63569280-63569299 Msa1261250:intron 30.0%
ATGCTTGGAAATAAATGAGA+AGG - chr8_2:63569487-63569506 None:intergenic 30.0%
CAATCTCAAAATTTGATGCT+TGG - chr8_2:63569502-63569521 None:intergenic 30.0%
TAAATTTCACAATGTGGCTT+AGG + chr8_2:63569897-63569916 Msa1261250:intron 30.0%
TCTATCGTCAACATAATTCA+AGG - chr8_2:63570037-63570056 None:intergenic 30.0%
GACGATAGAGAATCATTATA+TGG + chr8_2:63570048-63570067 Msa1261250:intron 30.0%
!! TTCTCTTTAAAGTGTTAGCA+CGG + chr8_2:63570207-63570226 Msa1261250:intron 30.0%
GAAAATCAATTGCATGTCAT+TGG - chr8_2:63570250-63570269 None:intergenic 30.0%
CCTTTATGGAGCTTAATTAA+TGG - chr8_2:63570377-63570396 None:intergenic 30.0%
CCATTAATTAAGCTCCATAA+AGG + chr8_2:63570374-63570393 Msa1261250:intron 30.0%
!!! TTTTTTGCCACCATAATCTA+TGG - chr8_2:63570424-63570443 None:intergenic 30.0%
AGATTATGGTGGCAAAAAAT+TGG + chr8_2:63570425-63570444 Msa1261250:intron 30.0%
GAAATGCAAAAGTAGCTATT+AGG + chr8_2:63570482-63570501 Msa1261250:intron 30.0%
! AAGTGAATTCCTTGTTATCA+AGG + chr8_2:63570505-63570524 Msa1261250:intron 30.0%
! ATTCCTTGTTATCAAGGAAA+TGG + chr8_2:63570511-63570530 Msa1261250:intron 30.0%
CAAGAAATAAGCTGGATTAT+AGG - chr8_2:63570658-63570677 None:intergenic 30.0%
!!! GTTAATTTTTGTTGGTTTGC+AGG + chr8_2:63570730-63570749 Msa1261250:intron 30.0%
AAGATGAATCTTACCATACA+TGG - chr8_2:63570940-63570959 None:intergenic 30.0%
TGTATGGTAAGATTCATCTT+TGG + chr8_2:63570940-63570959 Msa1261250:three_prime_UTR 30.0%
AAGATTATAGCAATGCTTGT+TGG - chr8_2:63571016-63571035 None:intergenic 30.0%
TTGGAAGAGAAAAAGAGTGA+AGG + chr8_2:63567169-63567188 Msa1261250:five_prime_UTR 35.0%
TTGTAACTTTCACAAACCCT+AGG + chr8_2:63567543-63567562 Msa1261250:CDS 35.0%
GATGCTATCAACGATATGAA+CGG + chr8_2:63567575-63567594 Msa1261250:CDS 35.0%
ATGATGAAAGGAATGGAGAT+TGG + chr8_2:63567840-63567859 Msa1261250:CDS 35.0%
TGATGAAAGGAATGGAGATT+GGG + chr8_2:63567841-63567860 Msa1261250:CDS 35.0%
! GATCATGGTAATGAGAAAGA+TGG + chr8_2:63567905-63567924 Msa1261250:CDS 35.0%
GTAATGAGAAAGATGGATAC+AGG + chr8_2:63567912-63567931 Msa1261250:CDS 35.0%
AAAGATGGATACAGGAATAG+AGG + chr8_2:63567920-63567939 Msa1261250:CDS 35.0%
GAACACATGCTAGATTATGA+TGG + chr8_2:63568154-63568173 Msa1261250:CDS 35.0%
TTCTATCCCTATTCCTATCA+TGG - chr8_2:63568222-63568241 None:intergenic 35.0%
! GAAAGCATGTTAGATTGTGA+TGG + chr8_2:63568373-63568392 Msa1261250:CDS 35.0%
GATGATGATTGGAATCATGA+CGG + chr8_2:63568574-63568593 Msa1261250:CDS 35.0%
AAAATGAACTGGAAAACAGC+AGG + chr8_2:63568608-63568627 Msa1261250:CDS 35.0%
AAATGAACTGGAAAACAGCA+GGG + chr8_2:63568609-63568628 Msa1261250:CDS 35.0%
ATCCAGACAAAAAGATGGAA+AGG + chr8_2:63568674-63568693 Msa1261250:CDS 35.0%
! ATCCTTTCCATCTTTTTGTC+TGG - chr8_2:63568679-63568698 None:intergenic 35.0%
ATTCAAACTGCAGGAAAATC+AGG - chr8_2:63568849-63568868 None:intergenic 35.0%
ATTTGTCACATTCAAACTGC+AGG - chr8_2:63568858-63568877 None:intergenic 35.0%
AATAGTCCATCAGATTCCAA+TGG + chr8_2:63568881-63568900 Msa1261250:CDS 35.0%
ATAGTCCATCAGATTCCAAT+GGG + chr8_2:63568882-63568901 Msa1261250:CDS 35.0%
ATCACATTACCTCATCATTG+TGG - chr8_2:63568910-63568929 None:intergenic 35.0%
AGGTAGAAGATGAATTAGAG+AGG + chr8_2:63569066-63569085 Msa1261250:intron 35.0%
GCTTGATCAACTAAAAAAGG+AGG + chr8_2:63569100-63569119 Msa1261250:CDS 35.0%
TCTGAACATGTGCATTTCAA+AGG + chr8_2:63569244-63569263 Msa1261250:intron 35.0%
! TTAAAGATTAGAGCGCTTGT+TGG - chr8_2:63569335-63569354 None:intergenic 35.0%
! TTCTCCTTTTTATGTGTTGG+TGG + chr8_2:63569365-63569384 Msa1261250:intron 35.0%
! CTGAAAAGTGGAATTTTGTC+AGG + chr8_2:63569390-63569409 Msa1261250:intron 35.0%
! ATTTTGTCAGGTTTCTAAGC+TGG + chr8_2:63569402-63569421 Msa1261250:intron 35.0%
TGTGTTCAAAGTAAGGATGT+TGG - chr8_2:63569537-63569556 None:intergenic 35.0%
! CAGCTTTTGTGTTCAAAGTA+AGG - chr8_2:63569544-63569563 None:intergenic 35.0%
GAAGATATTTACCGCAGAAA+CGG + chr8_2:63569581-63569600 Msa1261250:intron 35.0%
AAGATATTTACCGCAGAAAC+GGG + chr8_2:63569582-63569601 Msa1261250:intron 35.0%
ATATTGCTAACATTGGGCTT+GGG + chr8_2:63569711-63569730 Msa1261250:intron 35.0%
!!! ACTGGTTTTAAGTCTTTCTG+TGG - chr8_2:63569782-63569801 None:intergenic 35.0%
! GAAAAATCTCTGCAGTTTTG+TGG + chr8_2:63569964-63569983 Msa1261250:intron 35.0%
!! TCTCTTTAAAGTGTTAGCAC+GGG + chr8_2:63570208-63570227 Msa1261250:intron 35.0%
CCATAATCTATGGCATAAGA+TGG - chr8_2:63570414-63570433 None:intergenic 35.0%
CCATCTTATGCCATAGATTA+TGG + chr8_2:63570411-63570430 Msa1261250:intron 35.0%
TCTTATGCCATAGATTATGG+TGG + chr8_2:63570414-63570433 Msa1261250:intron 35.0%
ACTTATGTGCGAAGTTGTAA+TGG + chr8_2:63570460-63570479 Msa1261250:intron 35.0%
AGAGATCTTTCAAATCTCAG+GGG - chr8_2:63570550-63570569 None:intergenic 35.0%
CAGAGATCTTTCAAATCTCA+GGG - chr8_2:63570551-63570570 None:intergenic 35.0%
TCAGAGATCTTTCAAATCTC+AGG - chr8_2:63570552-63570571 None:intergenic 35.0%
GAGATTTGAAAGATCTCTGA+TGG + chr8_2:63570552-63570571 Msa1261250:intron 35.0%
! TCGATTTGACCTTGTGAATA+TGG + chr8_2:63570588-63570607 Msa1261250:intron 35.0%
AAACCAAGACCATATTCACA+AGG - chr8_2:63570600-63570619 None:intergenic 35.0%
! TTGTGAATATGGTCTTGGTT+TGG + chr8_2:63570599-63570618 Msa1261250:intron 35.0%
!! CGTATTTACTTAACTTGTGC+TGG + chr8_2:63570694-63570713 Msa1261250:intron 35.0%
TCAATATTGTTCGAGAGTGA+CGG + chr8_2:63570764-63570783 Msa1261250:CDS 35.0%
CTTACAAATGGAAGTCTAGA+TGG + chr8_2:63570812-63570831 Msa1261250:CDS 35.0%
GACAACACATGGTACAAAAA+TGG - chr8_2:63570879-63570898 None:intergenic 35.0%
GCAATTAAAGAGACAACACA+TGG - chr8_2:63570890-63570909 None:intergenic 35.0%
TTGTCTCTTTAATTGCCTAG+TGG + chr8_2:63570894-63570913 Msa1261250:three_prime_UTR 35.0%
GTGAGATAGTAAAAACCACT+AGG - chr8_2:63570912-63570931 None:intergenic 35.0%
GGCTGATATGTAGAGAAAAA+AGG + chr8_2:63571096-63571115 Msa1261250:three_prime_UTR 35.0%
ATATGTAGAGAAAAAAGGCC+TGG + chr8_2:63571101-63571120 Msa1261250:three_prime_UTR 35.0%
AGAGTGAAGGAGAAAGACTA+TGG + chr8_2:63567182-63567201 Msa1261250:five_prime_UTR 40.0%
TCAGTTCCACAAAATGACAC+TGG + chr8_2:63567241-63567260 Msa1261250:exon 40.0%
GATGATAGCTCCATTTACGT+TGG + chr8_2:63567266-63567285 Msa1261250:CDS 40.0%
AGTGCGAATTGTTTCATCAG+TGG - chr8_2:63567309-63567328 None:intergenic 40.0%
CGCACTGTCTTCAATTTGTA+TGG + chr8_2:63567323-63567342 Msa1261250:CDS 40.0%
GACTACCTTGACATCAAGAA+TGG - chr8_2:63567351-63567370 None:intergenic 40.0%
ATCAATGACCAACGTACACT+TGG + chr8_2:63567506-63567525 Msa1261250:CDS 40.0%
TCAATGACCAACGTACACTT+GGG + chr8_2:63567507-63567526 Msa1261250:CDS 40.0%
TAGCATCAATTGCAGACCTA+GGG - chr8_2:63567562-63567581 None:intergenic 40.0%
ATAGCATCAATTGCAGACCT+AGG - chr8_2:63567563-63567582 None:intergenic 40.0%
TGGTAATTATTGTTGTGGCG+TGG + chr8_2:63567656-63567675 Msa1261250:intron 40.0%
GCCGTGTGGTTAAAGTTAAT+GGG + chr8_2:63567735-63567754 Msa1261250:CDS 40.0%
CCCCATTAACTTTAACCACA+CGG - chr8_2:63567739-63567758 None:intergenic 40.0%
CCGTGTGGTTAAAGTTAATG+GGG + chr8_2:63567736-63567755 Msa1261250:CDS 40.0%
TGGTTAAAGTTAATGGGGTG+AGG + chr8_2:63567741-63567760 Msa1261250:CDS 40.0%
! GTGGTGGCAGATCAAATTTT+GGG + chr8_2:63567789-63567808 Msa1261250:CDS 40.0%
CGAGACCAAGATTATGATCA+TGG + chr8_2:63567890-63567909 Msa1261250:CDS 40.0%
TTCTATCCCTATCCCTATCA+TGG - chr8_2:63568036-63568055 None:intergenic 40.0%
AAAGCATGTTAGTCCGTGAT+AGG + chr8_2:63568095-63568114 Msa1261250:CDS 40.0%
CAAGCTAGAGCAAGTATGTT+AGG + chr8_2:63568178-63568197 Msa1261250:CDS 40.0%
! CAACTTTTATACCCCTGTCA+CGG - chr8_2:63568321-63568340 None:intergenic 40.0%
AGAAGAGTTGAGCATTTGCA+AGG + chr8_2:63568424-63568443 Msa1261250:CDS 40.0%
TATCCCTAACCATGATGTCA+CGG - chr8_2:63568501-63568520 None:intergenic 40.0%
ATTGGAATCATGACGGTGAT+AGG + chr8_2:63568581-63568600 Msa1261250:CDS 40.0%
TTGGAATCATGACGGTGATA+GGG + chr8_2:63568582-63568601 Msa1261250:CDS 40.0%
TGATAGGGCTGAAAATGAAC+TGG + chr8_2:63568597-63568616 Msa1261250:CDS 40.0%
TAAGGACCGTAACTTAGATG+TGG + chr8_2:63568651-63568670 Msa1261250:CDS 40.0%
CTGGATCCACATCTAAGTTA+CGG - chr8_2:63568660-63568679 None:intergenic 40.0%
TGTGGATCCAGACAAAAAGA+TGG + chr8_2:63568669-63568688 Msa1261250:CDS 40.0%
TCTTACTCGATGTTTCTCCT+CGG - chr8_2:63568745-63568764 None:intergenic 40.0%
TAGTCCATCAGATTCCAATG+GGG + chr8_2:63568883-63568902 Msa1261250:CDS 40.0%
AAATGTGGCAGAATCAGTCT+CGG - chr8_2:63569014-63569033 None:intergenic 40.0%
!! TACTTGCTTTTGTGGTCTTC+AGG + chr8_2:63569046-63569065 Msa1261250:intron 40.0%
AGCACCACCAACACATAAAA+AGG - chr8_2:63569372-63569391 None:intergenic 40.0%
!! GGAGTTACAAAAGCACTCTA+AGG + chr8_2:63569459-63569478 Msa1261250:CDS 40.0%
GATATTGCTAACATTGGGCT+TGG + chr8_2:63569710-63569729 Msa1261250:intron 40.0%
AGAAAACATTCATGCAGCTG+AGG - chr8_2:63569745-63569764 None:intergenic 40.0%
AACCAGTGAAAAAGAACTCC+AGG + chr8_2:63569795-63569814 Msa1261250:CDS 40.0%
!! AACCTGGAGTTCTTTTTCAC+TGG - chr8_2:63569800-63569819 None:intergenic 40.0%
TATATGGTGCAGTTGTATGC+AGG + chr8_2:63570064-63570083 Msa1261250:intron 40.0%
! GCACGGGTATTTGTATTTTG+AGG + chr8_2:63570224-63570243 Msa1261250:intron 40.0%
! CAGCCATTTCCTTGATAACA+AGG - chr8_2:63570517-63570536 None:intergenic 40.0%
TGACCTTGTGAATATGGTCT+TGG + chr8_2:63570594-63570613 Msa1261250:intron 40.0%
GGTCTTGGACAACTTACAAA+TGG + chr8_2:63570800-63570819 Msa1261250:CDS 40.0%
TATCTCACTAGCTCCATGTA+TGG + chr8_2:63570924-63570943 Msa1261250:three_prime_UTR 40.0%
! TTTTCTCTACATATCAGCCC+AGG - chr8_2:63571095-63571114 None:intergenic 40.0%
!!! CATCGTCCAGTGTCATTTTG+TGG - chr8_2:63567250-63567269 None:intergenic 45.0%
GATAGCTCCATTTACGTTGG+TGG + chr8_2:63567269-63567288 Msa1261250:CDS 45.0%
AGCATTTCCCAAGTGTACGT+TGG - chr8_2:63567517-63567536 None:intergenic 45.0%
TCAGACTATTAATGGCCGTG+TGG + chr8_2:63567721-63567740 Msa1261250:intron 45.0%
GGCCGTGTGGTTAAAGTTAA+TGG + chr8_2:63567734-63567753 Msa1261250:CDS 45.0%
!! GGTGGTGGCAGATCAAATTT+TGG + chr8_2:63567788-63567807 Msa1261250:CDS 45.0%
ACAGGAATAGAGGCAGTGAT+TGG + chr8_2:63567930-63567949 Msa1261250:CDS 45.0%
ATAGGTCTCGAGACCATGAT+AGG + chr8_2:63568020-63568039 Msa1261250:CDS 45.0%
TAGGTCTCGAGACCATGATA+GGG + chr8_2:63568021-63568040 Msa1261250:CDS 45.0%
TCGAGACCATGATAGGGATA+GGG + chr8_2:63568027-63568046 Msa1261250:CDS 45.0%
TTCTATCCCTATCCCTGTCA+CGG - chr8_2:63568129-63568148 None:intergenic 45.0%
ATAGATCCCGAGACCATGAT+AGG + chr8_2:63568206-63568225 Msa1261250:CDS 45.0%
CCTATTCCTATCATGGTCTC+GGG - chr8_2:63568215-63568234 None:intergenic 45.0%
CCCTATTCCTATCATGGTCT+CGG - chr8_2:63568216-63568235 None:intergenic 45.0%
CCGAGACCATGATAGGAATA+GGG + chr8_2:63568213-63568232 Msa1261250:CDS 45.0%
AAAGCGTGTTAGACCGTGAT+AGG + chr8_2:63568281-63568300 Msa1261250:CDS 45.0%
TTCTGCTCCTATCTCTGTCA+CGG - chr8_2:63568408-63568427 None:intergenic 45.0%
AAAGCATGTTAGACCGCGAT+GGG + chr8_2:63568467-63568486 Msa1261250:CDS 45.0%
TAACCATGATGTCACGGTCT+CGG - chr8_2:63568495-63568514 None:intergenic 45.0%
AGACCGTGACATCATGGTTA+GGG + chr8_2:63568495-63568514 Msa1261250:CDS 45.0%
TCAGGTTTCTAAGCTGGAAG+AGG + chr8_2:63569408-63569427 Msa1261250:intron 45.0%
CAGGTTTCTAAGCTGGAAGA+GGG + chr8_2:63569409-63569428 Msa1261250:intron 45.0%
TTCTAAGCTGGAAGAGGGAT+TGG + chr8_2:63569414-63569433 Msa1261250:CDS 45.0%
ATATTTACCGCAGAAACGGG+AGG + chr8_2:63569585-63569604 Msa1261250:intron 45.0%
TTACCTTGGTCAACTGCATC+TGG - chr8_2:63569648-63569667 None:intergenic 45.0%
TTAGCATGTGGCATCTTACC+TGG + chr8_2:63571074-63571093 Msa1261250:three_prime_UTR 45.0%
TAGCATGTGGCATCTTACCT+GGG + chr8_2:63571075-63571094 Msa1261250:three_prime_UTR 45.0%
!! TAAAAAAAAATACAATAATA+TGG - chr8_2:63567617-63567636 None:intergenic 5.0%
!! AAAGTAAAATTAATAATAAA+TGG - chr8_2:63569998-63570017 None:intergenic 5.0%
GGGAAGACCACCAACGTAAA+TGG - chr8_2:63567279-63567298 None:intergenic 50.0%
! GTTTCATCAGTGGCGTCGAA+GGG - chr8_2:63567299-63567318 None:intergenic 50.0%
! TGTTTCATCAGTGGCGTCGA+AGG - chr8_2:63567300-63567319 None:intergenic 50.0%
TGGCGCCATTCTTGATGTCA+AGG + chr8_2:63567343-63567362 Msa1261250:CDS 50.0%
AGGAATGGAGATTGGGATCG+TGG + chr8_2:63567848-63567867 Msa1261250:CDS 50.0%
AATGGAGATTGGGATCGTGG+CGG + chr8_2:63567851-63567870 Msa1261250:CDS 50.0%
ATTGGACCAGAGGTGGTGAT+TGG + chr8_2:63567948-63567967 Msa1261250:CDS 50.0%
ATTGGACTCGACAGCATCAG+AGG + chr8_2:63567966-63567985 Msa1261250:CDS 50.0%
CATGGTCTCGAGACCTATCA+CGG - chr8_2:63568018-63568037 None:intergenic 50.0%
CTCGAGACCATGATAGGGAT+AGG + chr8_2:63568026-63568045 Msa1261250:CDS 50.0%
CATGGTCTCGGGATCTATCA+CGG - chr8_2:63568204-63568223 None:intergenic 50.0%
CCCGAGACCATGATAGGAAT+AGG + chr8_2:63568212-63568231 Msa1261250:CDS 50.0%
TTATACCCCTGTCACGGTCA+CGG - chr8_2:63568315-63568334 None:intergenic 50.0%
TCCTATCTCTGTCACGGTCT+CGG - chr8_2:63568402-63568421 None:intergenic 50.0%
! GAAAGCATGTTAGACCGCGA+TGG + chr8_2:63568466-63568485 Msa1261250:CDS 50.0%
AACCATGATGTCACGGTCTC+GGG - chr8_2:63568494-63568513 None:intergenic 50.0%
GAGACCGTGACATCATGGTT+AGG + chr8_2:63568494-63568513 Msa1261250:CDS 50.0%
ACTGGAAAACAGCAGGGTAC+AGG + chr8_2:63568615-63568634 Msa1261250:CDS 50.0%
CTGGAAAACAGCAGGGTACA+GGG + chr8_2:63568616-63568635 Msa1261250:CDS 50.0%
ACAGGGTGGAGATGTGGATA+AGG + chr8_2:63568633-63568652 Msa1261250:CDS 50.0%
TGGTCCCCATTGGAATCTGA+TGG - chr8_2:63568890-63568909 None:intergenic 50.0%
CTCATCATTGTGGTCCCCAT+TGG - chr8_2:63568900-63568919 None:intergenic 50.0%
CAATGGGGACCACAATGATG+AGG + chr8_2:63568898-63568917 Msa1261250:CDS 50.0%
! ATGGCGATGTCTGCTCTAGA+AGG + chr8_2:63569173-63569192 Msa1261250:intron 50.0%
!! GTGTTGGTGGTGCTGAAAAG+TGG + chr8_2:63569378-63569397 Msa1261250:intron 50.0%
TTGTTCGAGAGTGACGGTGA+TGG + chr8_2:63570770-63570789 Msa1261250:CDS 50.0%
GTTAATGGGGTGAGGTCTCG+TGG + chr8_2:63567749-63567768 Msa1261250:CDS 55.0%
AGAGGCAGTGATTGGACCAG+AGG + chr8_2:63567938-63567957 Msa1261250:CDS 55.0%
TCGAGTCCAATCACCACCTC+TGG - chr8_2:63567957-63567976 None:intergenic 55.0%
AGAGGTCTCGAGACCGTGAT+AGG + chr8_2:63567984-63568003 Msa1261250:CDS 55.0%
CCTATCTCTGTCACGGTCTC+GGG - chr8_2:63568401-63568420 None:intergenic 55.0%
GAAAACAGCAGGGTACAGGG+TGG + chr8_2:63568619-63568638 Msa1261250:CDS 55.0%
ACAGCATCCTCCCGTTTCTG+CGG - chr8_2:63569595-63569614 None:intergenic 55.0%
TCGCCAGATGCAGTTGACCA+AGG + chr8_2:63569642-63569661 Msa1261250:CDS 55.0%
! GAGAGTGACGGTGATGGTGA+TGG + chr8_2:63570776-63570795 Msa1261250:CDS 55.0%
!! AGTGACGGTGATGGTGATGG+TGG + chr8_2:63570779-63570798 Msa1261250:CDS 55.0%
!! GGTGATGGTGATGGTGGTCT+TGG + chr8_2:63570785-63570804 Msa1261250:CDS 55.0%
AATGGGGTGAGGTCTCGTGG+CGG + chr8_2:63567752-63567771 Msa1261250:CDS 60.0%
GGCAGTGATTGGACCAGAGG+TGG + chr8_2:63567941-63567960 Msa1261250:CDS 60.0%
ATAGGTCCCGCGACCGTGAT+AGG + chr8_2:63568002-63568021 Msa1261250:CDS 60.0%
TCGAGACCTATCACGGTCGC+GGG - chr8_2:63568011-63568030 None:intergenic 60.0%
CTCGAGACCTATCACGGTCG+CGG - chr8_2:63568012-63568031 None:intergenic 60.0%
CACGGTCTCGGGACCTATCA+CGG - chr8_2:63568111-63568130 None:intergenic 60.0%
ATAGGTCCCGAGACCGTGAC+AGG + chr8_2:63568113-63568132 Msa1261250:CDS 60.0%
TAGGTCCCGAGACCGTGACA+GGG + chr8_2:63568114-63568133 Msa1261250:CDS 60.0%
CCTATCCCTGTCACGGTCTC+GGG - chr8_2:63568122-63568141 None:intergenic 60.0%
CCCTATCCCTGTCACGGTCT+CGG - chr8_2:63568123-63568142 None:intergenic 60.0%
CCGAGACCGTGACAGGGATA+GGG + chr8_2:63568120-63568139 Msa1261250:CDS 60.0%
CACGGTCTCGGGACCTATCA+CGG - chr8_2:63568111-63568130 None:intergenic 60.0%
CCCGAGACCGTGACAGAGAT+AGG + chr8_2:63568398-63568417 Msa1261250:CDS 60.0%
GTCCCGAGACCGTGACATCA+TGG + chr8_2:63568489-63568508 Msa1261250:CDS 60.0%
CAGGGTACAGGGTGGAGATG+TGG + chr8_2:63568627-63568646 Msa1261250:CDS 60.0%
CACGGTCGCGGGACCTATCA+CGG - chr8_2:63568000-63568019 None:intergenic 65.0%
CCCGAGACCGTGACAGGGAT+AGG + chr8_2:63568119-63568138 Msa1261250:CDS 65.0%
CCTGTCACGGTCACGGTCTC+GGG - chr8_2:63568308-63568327 None:intergenic 65.0%
CCCTGTCACGGTCACGGTCT+CGG - chr8_2:63568309-63568328 None:intergenic 65.0%
CCGAGACCGTGACCGTGACA+GGG + chr8_2:63568306-63568325 Msa1261250:CDS 65.0%
CGAGACCGTGACCGTGACAG+GGG + chr8_2:63568307-63568326 Msa1261250:CDS 65.0%
GTGAGGTCTCGTGGCGGTGG+AGG + chr8_2:63567758-63567777 Msa1261250:CDS 70.0%
AGGTCTCGTGGCGGTGGAGG+TGG + chr8_2:63567761-63567780 Msa1261250:CDS 70.0%
TCTCGTGGCGGTGGAGGTGG+CGG + chr8_2:63567764-63567783 Msa1261250:CDS 70.0%
CCCGAGACCGTGACCGTGAC+AGG + chr8_2:63568305-63568324 Msa1261250:CDS 70.0%
CACGGTCTCGGGACCCATCG+CGG - chr8_2:63568483-63568502 None:intergenic 70.0%
GGGGTGAGGTCTCGTGGCGG+TGG + chr8_2:63567755-63567774 Msa1261250:CDS 75.0%
! GGTGGAGGTGGCGGTGGTGG+TGG + chr8_2:63567773-63567792 Msa1261250:CDS 75.0%
!! CGTGGCGGTGGAGGTGGCGG+TGG + chr8_2:63567767-63567786 Msa1261250:CDS 80.0%
!! GGCGGTGGAGGTGGCGGTGG+TGG + chr8_2:63567770-63567789 Msa1261250:CDS 80.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 63567163 63571161 63567163 ID=Msa1261250;Name=Msa1261250
chr8_2 mRNA 63567163 63571161 63567163 ID=Msa1261250-mRNA-1;Parent=Msa1261250;Name=Msa1261250-mRNA-1;_AED=0.11;_eAED=0.11;_QI=91|1|0.88|1|1|1|9|320|549
chr8_2 exon 63567163 63567364 63567163 ID=Msa1261250-mRNA-1:exon:20323;Parent=Msa1261250-mRNA-1
chr8_2 exon 63567503 63567601 63567503 ID=Msa1261250-mRNA-1:exon:20324;Parent=Msa1261250-mRNA-1
chr8_2 exon 63567725 63568758 63567725 ID=Msa1261250-mRNA-1:exon:20325;Parent=Msa1261250-mRNA-1
chr8_2 exon 63568862 63568919 63568862 ID=Msa1261250-mRNA-1:exon:20326;Parent=Msa1261250-mRNA-1
chr8_2 exon 63569068 63569121 63569068 ID=Msa1261250-mRNA-1:exon:20327;Parent=Msa1261250-mRNA-1
chr8_2 exon 63569412 63569480 63569412 ID=Msa1261250-mRNA-1:exon:20328;Parent=Msa1261250-mRNA-1
chr8_2 exon 63569598 63569663 63569598 ID=Msa1261250-mRNA-1:exon:20329;Parent=Msa1261250-mRNA-1
chr8_2 exon 63569748 63569816 63569748 ID=Msa1261250-mRNA-1:exon:20330;Parent=Msa1261250-mRNA-1
chr8_2 exon 63570752 63571161 63570752 ID=Msa1261250-mRNA-1:exon:20331;Parent=Msa1261250-mRNA-1
chr8_2 five_prime_UTR 63567163 63567253 63567163 ID=Msa1261250-mRNA-1:five_prime_utr;Parent=Msa1261250-mRNA-1
chr8_2 CDS 63567254 63567364 63567254 ID=Msa1261250-mRNA-1:cds;Parent=Msa1261250-mRNA-1
chr8_2 CDS 63567503 63567601 63567503 ID=Msa1261250-mRNA-1:cds;Parent=Msa1261250-mRNA-1
chr8_2 CDS 63567725 63568758 63567725 ID=Msa1261250-mRNA-1:cds;Parent=Msa1261250-mRNA-1
chr8_2 CDS 63568862 63568919 63568862 ID=Msa1261250-mRNA-1:cds;Parent=Msa1261250-mRNA-1
chr8_2 CDS 63569068 63569121 63569068 ID=Msa1261250-mRNA-1:cds;Parent=Msa1261250-mRNA-1
chr8_2 CDS 63569412 63569480 63569412 ID=Msa1261250-mRNA-1:cds;Parent=Msa1261250-mRNA-1
chr8_2 CDS 63569598 63569663 63569598 ID=Msa1261250-mRNA-1:cds;Parent=Msa1261250-mRNA-1
chr8_2 CDS 63569748 63569816 63569748 ID=Msa1261250-mRNA-1:cds;Parent=Msa1261250-mRNA-1
chr8_2 CDS 63570752 63570841 63570752 ID=Msa1261250-mRNA-1:cds;Parent=Msa1261250-mRNA-1
chr8_2 three_prime_UTR 63570842 63571161 63570842 ID=Msa1261250-mRNA-1:three_prime_utr;Parent=Msa1261250-mRNA-1
Gene Sequence

>Msa1261250

ATGACACTGGACGATGATAGCTCCATTTACGTTGGTGGTCTTCCCTTCGACGCCACTGATGAAACAATTCGCACTGTCTTCAATTTGTATGGCGCCATTCTTGATGTCAAGATTATCAATGACCAACGTACACTTGGGAAATGCTATTGTTTTGTAACTTTCACAAACCCTAGGTCTGCAATTGATGCTATCAACGATATGAACGGAAGAACTATTAATGGCCGTGTGGTTAAAGTTAATGGGGTGAGGTCTCGTGGCGGTGGAGGTGGCGGTGGTGGTGGCAGATCAAATTTTGGGAGAGAAAGAGAACGTTATTATCATCATAATGATGAAAGGAATGGAGATTGGGATCGTGGCGGCAGAGATCGAGAGATTCGAGACCAAGATTATGATCATGGTAATGAGAAAGATGGATACAGGAATAGAGGCAGTGATTGGACCAGAGGTGGTGATTGGACTCGACAGCATCAGAGGTCTCGAGACCGTGATAGGTCCCGCGACCGTGATAGGTCTCGAGACCATGATAGGGATAGGGATAGAAGATTCGAGCATATGCAAAATTATGATGGTCAAGCTAGAGAAAGCATGTTAGTCCGTGATAGGTCCCGAGACCGTGACAGGGATAGGGATAGAAAAGTTGAACACATGCTAGATTATGATGGTCAAGCTAGAGCAAGTATGTTAGGCCGTGATAGATCCCGAGACCATGATAGGAATAGGGATAGAAGAGTTGAACATATGCAAGATTATGATGATCAAGCTAGAGAAAGCGTGTTAGACCGTGATAGGTCCCGAGACCGTGACCGTGACAGGGGTATAAAAGTTGAGCATTTGCAAGATTATGATGATCAAGCTAGAGAAAGCATGTTAGATTGTGATGGGTCCCGAGACCGTGACAGAGATAGGAGCAGAAGAGTTGAGCATTTGCAAGGTTATGATGATCAAGCTAGAGAAAGCATGTTAGACCGCGATGGGTCCCGAGACCGTGACATCATGGTTAGGGATAGAAGAGTTGAACATTTGCAAGATTATGATGATCAACATAGAGAAAGCATGTTAGATGATGATTGGAATCATGACGGTGATAGGGCTGAAAATGAACTGGAAAACAGCAGGGTACAGGGTGGAGATGTGGATAAGGACCGTAACTTAGATGTGGATCCAGACAAAAAGATGGAAAGGATTAGTGATCCTGATAAAAGTTTTGACGAACATAAAAAAGAACAACCGAGGAGAAACATCGATTTGAATGTGACAAATCAAAATAGTCCATCAGATTCCAATGGGGACCACAATGATGAGGTAGAAGATGAATTAGAGAGGTCAATTCAACTGCTTGATCAACTAAAAAAGGAGGTTTCTAAGCTGGAAGAGGGATTGGAAGAAAGAAGACTTAATGTTATGGAGTTACAAAAGCACTCTAAGAAACGGGAGGATGCTGTGATTACTGCAAAGAAAAAATCTTTATATCGCCAGATGCAGTTGACCAAGCTGCATGAATGTTTTCTGCAAGTGCACGATTCCACAGAAAGACTTAAAACCAGTGAAAAAGAACTCCAGGCTCTAGTTGAATCAATATTGTTCGAGAGTGACGGTGATGGTGATGGTGGTCTTGGACAACTTACAAATGGAAGTCTAGATGGTAGATAG

Protein sequence

>Msa1261250

MTLDDDSSIYVGGLPFDATDETIRTVFNLYGAILDVKIINDQRTLGKCYCFVTFTNPRSAIDAINDMNGRTINGRVVKVNGVRSRGGGGGGGGGRSNFGRERERYYHHNDERNGDWDRGGRDREIRDQDYDHGNEKDGYRNRGSDWTRGGDWTRQHQRSRDRDRSRDRDRSRDHDRDRDRRFEHMQNYDGQARESMLVRDRSRDRDRDRDRKVEHMLDYDGQARASMLGRDRSRDHDRNRDRRVEHMQDYDDQARESVLDRDRSRDRDRDRGIKVEHLQDYDDQARESMLDCDGSRDRDRDRSRRVEHLQGYDDQARESMLDRDGSRDRDIMVRDRRVEHLQDYDDQHRESMLDDDWNHDGDRAENELENSRVQGGDVDKDRNLDVDPDKKMERISDPDKSFDEHKKEQPRRNIDLNVTNQNSPSDSNGDHNDEVEDELERSIQLLDQLKKEVSKLEEGLEERRLNVMELQKHSKKREDAVITAKKKSLYRQMQLTKLHECFLQVHDSTERLKTSEKELQALVESILFESDGDGDGGLGQLTNGSLDGR*