Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0577580 | XP_003630496.2 | 90.132 | 456 | 5 | 2 | 1 | 416 | 1 | 456 | 0.0 | 841 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0577580 | sp|Q84WJ2|PRI2_ARATH | 66.297 | 451 | 109 | 3 | 1 | 411 | 1 | 448 | 0.0 | 617 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0577580 | G7LHA9 | 90.132 | 456 | 5 | 2 | 1 | 416 | 1 | 456 | 0.0 | 841 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0367520 | Msa0577580 | 0.810175 | 1.313817e-50 | -8.615850e-47 |
| Msa0481890 | Msa0577580 | 0.802351 | 5.847765e-49 | -8.615850e-47 |
| Msa0298470 | Msa0577580 | 0.810206 | 1.293745e-50 | -8.615850e-47 |
| Msa0567170 | Msa0577580 | 0.813563 | 2.403033e-51 | -8.615850e-47 |
| Msa0577580 | Msa0658640 | 0.807225 | 5.607040e-50 | -8.615850e-47 |
| Msa0577580 | Msa1078150 | 0.800073 | 1.709932e-48 | -8.615850e-47 |
| Msa0577580 | Msa1226520 | 0.806347 | 8.595358e-50 | -8.615850e-47 |
| Msa0577580 | Msa1306910 | 0.967389 | 3.282832e-127 | -8.615850e-47 |
| Msa0577580 | Msa1356060 | 0.842899 | 1.950860e-58 | -8.615850e-47 |
| Msa0577580 | Msa1421570 | 0.818254 | 2.157057e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0577580 | MtrunA17_Chr8g0377591 | 90.132 | 456 | 5 | 2 | 1 | 416 | 1 | 456 | 0.0 | 841 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0577580 | AT1G67320.2 | 66.297 | 451 | 109 | 3 | 1 | 411 | 1 | 448 | 0.0 | 617 |
| Msa0577580 | AT1G67320.1 | 65.410 | 451 | 108 | 4 | 1 | 411 | 1 | 443 | 0.0 | 602 |
| Msa0577580 | AT1G67320.3 | 61.396 | 487 | 109 | 4 | 1 | 411 | 1 | 484 | 0.0 | 599 |
Find 118 sgRNAs with CRISPR-Local
Find 486 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGAGCATAAAAGAGAAAT+TGG | 0.138711 | 4_1:+81918875 | Msa0577580:intron |
| TCCCTTCCTTTCCATAATTA+TGG | 0.220230 | 4_1:-81921353 | None:intergenic |
| TTGCTATAACTAAATTTATT+AGG | 0.222324 | 4_1:-81923759 | None:intergenic |
| AGCCTTGAGCTCAAGTTATC+TGG | 0.232241 | 4_1:+81920263 | Msa0577580:CDS |
| TATAACATCCGCCATAATTA+TGG | 0.255773 | 4_1:+81921342 | Msa0577580:CDS |
| CAAGTTTCTGATTGGGAATC+TGG | 0.263174 | 4_1:+81924065 | Msa0577580:three_prime_UTR |
| GTTGCCCCTATCGACATTTC+AGG | 0.293155 | 4_1:+81921652 | Msa0577580:CDS |
| GAGGAAATGGTTTCTCTCTA+TGG | 0.294414 | 4_1:+81918531 | Msa0577580:CDS |
| GAGAGCCGAGTTCTCTAAAA+AGG | 0.304942 | 4_1:+81920986 | Msa0577580:CDS |
| TTGACATTTGAAGCTCTTCA+TGG | 0.327404 | 4_1:+81922960 | Msa0577580:CDS |
| GATCTGGTTGTAGGTTGGTT+TGG | 0.342053 | 4_1:+81921296 | Msa0577580:intron |
| CTTGTAGGATAACTTATAAC+TGG | 0.342717 | 4_1:-81924046 | None:intergenic |
| AGTGCGAAATAGACATTATC+AGG | 0.352267 | 4_1:+81922840 | Msa0577580:CDS |
| TTGATGATGCACTTGCGTTT+TGG | 0.353934 | 4_1:+81920964 | Msa0577580:CDS |
| TGACGCCGAGCTACAAGTTC+TGG | 0.360768 | 4_1:-81919810 | None:intergenic |
| ATCCCATCTTAGAATTGCTT+TGG | 0.372320 | 4_1:-81924015 | None:intergenic |
| CTGTCACTGAAATATTGATT+TGG | 0.378955 | 4_1:-81923011 | None:intergenic |
| TGTTAACAGCCTTGCAAGTA+AGG | 0.382732 | 4_1:-81918709 | None:intergenic |
| CTAGGGAGGACTTGAGGAAA+TGG | 0.396637 | 4_1:+81918518 | Msa0577580:intron |
| TACACCATTTAGGTTGTTGT+TGG | 0.402537 | 4_1:+81923937 | Msa0577580:intron |
| CTCTGTAATGAGCAGGGTGT+TGG | 0.406755 | 4_1:+81920933 | Msa0577580:intron |
| TGCTTATGTTGCAATGAATC+AGG | 0.414717 | 4_1:+81919854 | Msa0577580:CDS |
| CTTCCAAAGCAATTCTAAGA+TGG | 0.417323 | 4_1:+81924012 | Msa0577580:three_prime_UTR |
| TTATCCTACAAGTTTCTGAT+TGG | 0.418548 | 4_1:+81924057 | Msa0577580:three_prime_UTR |
| ATTCCCAATCAGAAACTTGT+AGG | 0.420560 | 4_1:-81924061 | None:intergenic |
| TATCCTACAAGTTTCTGATT+GGG | 0.430637 | 4_1:+81924058 | Msa0577580:three_prime_UTR |
| GTGACGGAGCAGAGCGATAG+AGG | 0.430657 | 4_1:-81916971 | None:intergenic |
| GGGACAAGTTGCACGTTCCA+TGG | 0.434809 | 4_1:+81918896 | Msa0577580:CDS |
| AGAGCTGCTCTCAGCAGAAT+GGG | 0.439491 | 4_1:+81922781 | Msa0577580:CDS |
| ACGGGGTTAACACAAATATC+AGG | 0.447122 | 4_1:-81924182 | None:intergenic |
| TTCCACCGTGCTTTAAATGA+TGG | 0.448238 | 4_1:-81920680 | None:intergenic |
| GAGCGATAGAGGGGAATAGT+TGG | 0.448946 | 4_1:-81916960 | None:intergenic |
| AGCGATAGAGGGGAATAGTT+GGG | 0.453515 | 4_1:-81916959 | None:intergenic |
| CCTGCATGTAATATGATTGT+AGG | 0.453609 | 4_1:+81924151 | Msa0577580:three_prime_UTR |
| GATCTCTTACCTTATCAAAC+AGG | 0.455618 | 4_1:-81920480 | None:intergenic |
| CGCCATAATTATGGAAAGGA+AGG | 0.456170 | 4_1:+81921351 | Msa0577580:CDS |
| GGGAATAGTTGGGGCAGAAA+CGG | 0.457960 | 4_1:-81916949 | None:intergenic |
| AGTTCTGGAACTTCTTCAAA+TGG | 0.461785 | 4_1:-81919795 | None:intergenic |
| GATATCTCAGCATACTCTCT+TGG | 0.469419 | 4_1:-81920403 | None:intergenic |
| GAGCGCACAGAGGGCGATCA+TGG | 0.469552 | 4_1:+81918676 | Msa0577580:intron |
| ACCAACAAAACCTGTTTGTA+AGG | 0.470128 | 4_1:-81920026 | None:intergenic |
| GGCAGAAACGGCGTCGTTTG+AGG | 0.472429 | 4_1:-81916937 | None:intergenic |
| TACACCCTATTCCTGTCAAA+AGG | 0.474573 | 4_1:+81921593 | Msa0577580:CDS |
| CAGAGCATAAAAGAGAAATT+GGG | 0.476213 | 4_1:+81918876 | Msa0577580:intron |
| CATGGCGTGCAATGTGATGC+AGG | 0.477569 | 4_1:+81922978 | Msa0577580:CDS |
| TGTTAACAATGTGGAATTTG+AGG | 0.479416 | 4_1:+81918724 | Msa0577580:CDS |
| CACCCTTATGCAGCTGAAAG+AGG | 0.484465 | 4_1:+81920656 | Msa0577580:intron |
| TCAGACCAACCTTGAGAAAG+AGG | 0.484615 | 4_1:-81920716 | None:intergenic |
| AGACACTCGTCCTTACAAAC+AGG | 0.485036 | 4_1:+81920016 | Msa0577580:CDS |
| TTGTTCATCATTGTAGCCAC+TGG | 0.485505 | 4_1:+81924128 | Msa0577580:three_prime_UTR |
| GCCTTGAGCTCAAGTTATCT+GGG | 0.487764 | 4_1:+81920264 | Msa0577580:CDS |
| ATTTCATCAACTCCTGGTGC+TGG | 0.488157 | 4_1:+81921618 | Msa0577580:CDS |
| TGTTGATATTTATGATCGAC+GGG | 0.493266 | 4_1:-81924200 | None:intergenic |
| CGAATTTGACCTTACTTGCA+AGG | 0.493943 | 4_1:+81918700 | Msa0577580:CDS |
| TTGTTGATATTTATGATCGA+CGG | 0.494327 | 4_1:-81924201 | None:intergenic |
| AAGAGCTGCTCTCAGCAGAA+TGG | 0.494662 | 4_1:+81922780 | Msa0577580:CDS |
| TTCCAAAGCAATTCTAAGAT+GGG | 0.496457 | 4_1:+81924013 | Msa0577580:three_prime_UTR |
| GCACAGAGGAAATGAGCTCT+TGG | 0.507469 | 4_1:-81920449 | None:intergenic |
| TGCCACAGGTCAAGGACCTA+TGG | 0.507509 | 4_1:+81917559 | Msa0577580:intron |
| CACTGAAATATTGATTTGGA+TGG | 0.508695 | 4_1:-81923007 | None:intergenic |
| TTTGTCCATGACATCTTCCA+TGG | 0.509838 | 4_1:-81922818 | None:intergenic |
| AAGGTTATTTCATCAACTCC+TGG | 0.524352 | 4_1:+81921612 | Msa0577580:CDS |
| ATCATTTAAAGCACGGTGGA+AGG | 0.524580 | 4_1:+81920682 | Msa0577580:CDS |
| AGCAATTCTAAGATGGGATT+AGG | 0.528456 | 4_1:+81924019 | Msa0577580:three_prime_UTR |
| TTGTGCTGGTGGCCATTCAC+AGG | 0.528478 | 4_1:+81923789 | Msa0577580:three_prime_UTR |
| TTGTTCGACCTCAGAGTCAC+CGG | 0.529835 | 4_1:+81916904 | Msa0577580:CDS |
| ATGGGTCAGCCTTCACCCAC+AGG | 0.534789 | 4_1:+81918915 | Msa0577580:CDS |
| ACTGACCTGAAATGTCGATA+GGG | 0.539707 | 4_1:-81921657 | None:intergenic |
| GGACAAGTTGCACGTTCCAT+GGG | 0.546912 | 4_1:+81918897 | Msa0577580:CDS |
| TGACGGAGCAGAGCGATAGA+GGG | 0.551287 | 4_1:-81916970 | None:intergenic |
| CGTCAAGTGTTTATAAGTCA+AGG | 0.552383 | 4_1:+81919828 | Msa0577580:CDS |
| GTCTTCCTACCTGTGGGTGA+AGG | 0.553325 | 4_1:-81918924 | None:intergenic |
| AAGAGAATCTAACCTGTGAA+TGG | 0.555184 | 4_1:-81923801 | None:intergenic |
| GCAACTAGGCCTCTTTCTCA+AGG | 0.555674 | 4_1:+81920707 | Msa0577580:CDS |
| CCATGATGATCTCCAGCACC+AGG | 0.555841 | 4_1:-81921630 | None:intergenic |
| CACGGTGGAAGGATGCAACT+AGG | 0.560175 | 4_1:+81920693 | Msa0577580:CDS |
| CGTTTGAGGAAAATAAGTTC+CGG | 0.562277 | 4_1:-81916923 | None:intergenic |
| ACCCAGATAACTTGAGCTCA+AGG | 0.568417 | 4_1:-81920265 | None:intergenic |
| CTTCCTTTCCATAATTATGG+CGG | 0.571599 | 4_1:-81921350 | None:intergenic |
| TCGAGCCATGGAAGATGTCA+TGG | 0.572780 | 4_1:+81922813 | Msa0577580:CDS |
| CATGCGTCACCTGTTTGATA+AGG | 0.572949 | 4_1:+81920471 | Msa0577580:CDS |
| CAGTAGTTAGAAAACGAAAA+CGG | 0.574427 | 4_1:-81918573 | None:intergenic |
| CCTGGTGCTGGAGATCATCA+TGG | 0.575225 | 4_1:+81921630 | Msa0577580:CDS |
| TTCTGATTGGGAATCTGGCA+CGG | 0.575280 | 4_1:+81924070 | Msa0577580:three_prime_UTR |
| AAAACGCAAGTGCATCATCA+AGG | 0.582984 | 4_1:-81920962 | None:intergenic |
| GCGATAGAGGGGAATAGTTG+GGG | 0.584876 | 4_1:-81916958 | None:intergenic |
| CCTACAATCATATTACATGC+AGG | 0.586719 | 4_1:-81924151 | None:intergenic |
| CTGCATGTAATATGATTGTA+GGG | 0.588740 | 4_1:+81924152 | Msa0577580:three_prime_UTR |
| TCAAAAGATATTGCAGCCAA+AGG | 0.599350 | 4_1:+81923034 | Msa0577580:CDS |
| CATCCGCCATAATTATGGAA+AGG | 0.599886 | 4_1:+81921347 | Msa0577580:CDS |
| TGTAATATGATTGTAGGGAA+TGG | 0.604744 | 4_1:+81924157 | Msa0577580:three_prime_UTR |
| GACGGAGCAGAGCGATAGAG+GGG | 0.606861 | 4_1:-81916969 | None:intergenic |
| ATGAAGAGCTTCAAATGTCA+AGG | 0.608226 | 4_1:-81922958 | None:intergenic |
| GAGCTGCTCTCAGCAGAATG+GGG | 0.613326 | 4_1:+81922782 | Msa0577580:CDS |
| TGCTTCTGAAATTCTGAACA+AGG | 0.615564 | 4_1:+81917605 | Msa0577580:CDS |
| ATAGCAAGAGAGTGTTGTGC+TGG | 0.616107 | 4_1:+81923775 | Msa0577580:three_prime_UTR |
| TCGAGTCGAACTTCGAGTGA+CGG | 0.617251 | 4_1:-81916987 | None:intergenic |
| GACTGACCTGAAATGTCGAT+AGG | 0.621390 | 4_1:-81921658 | None:intergenic |
| AAGTTCCAGAACTTGTAGCT+CGG | 0.624924 | 4_1:+81919805 | Msa0577580:CDS |
| TTGATGTATAGACGCAGACA+TGG | 0.626593 | 4_1:+81923972 | Msa0577580:three_prime_UTR |
| GTATGACTAGGGAGGACTTG+AGG | 0.628935 | 4_1:+81918512 | Msa0577580:intron |
| GCCATAATTATGGAAAGGAA+GGG | 0.636415 | 4_1:+81921352 | Msa0577580:CDS |
| TGTGGGTGAAGGCTGACCCA+TGG | 0.640159 | 4_1:-81918913 | None:intergenic |
| GCAAGAGAGTGTTGTGCTGG+TGG | 0.642778 | 4_1:+81923778 | Msa0577580:three_prime_UTR |
| GAGGACCATCATTTAAAGCA+CGG | 0.643728 | 4_1:+81920675 | Msa0577580:CDS |
| AGCTGCTCTCAGCAGAATGG+GGG | 0.643916 | 4_1:+81922783 | Msa0577580:CDS |
| AATAAGTTCCGGTGACTCTG+AGG | 0.644490 | 4_1:-81916912 | None:intergenic |
| TTGCAAGGCTGTTAACAATG+TGG | 0.645004 | 4_1:+81918715 | Msa0577580:CDS |
| TGATTGGGAATCTGGCACGG+TGG | 0.648811 | 4_1:+81924073 | Msa0577580:three_prime_UTR |
| TCATATTACATGCAGGCCAG+TGG | 0.650462 | 4_1:-81924144 | None:intergenic |
| CTGACCTGAAATGTCGATAG+GGG | 0.653528 | 4_1:-81921656 | None:intergenic |
| GCGTAAAAGACACTTGTGCA+TGG | 0.661706 | 4_1:-81924334 | None:intergenic |
| ATGGCGTGCAATGTGATGCA+GGG | 0.674376 | 4_1:+81922979 | Msa0577580:CDS |
| GTGTCTTTGACAACTGACTG+CGG | 0.690799 | 4_1:-81919999 | None:intergenic |
| CAACTGACTGCGGAATAGCG+TGG | 0.706102 | 4_1:-81919989 | None:intergenic |
| GACCATCATTTAAAGCACGG+TGG | 0.721859 | 4_1:+81920678 | Msa0577580:CDS |
| AACAGGTGACGCATGCACAG+AGG | 0.745591 | 4_1:-81920463 | None:intergenic |
| GTTGATATTTATGATCGACG+GGG | 0.765487 | 4_1:-81924199 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCATTTTTTCAAATAATTAT+CGG | + | chr4_1:81917303-81917322 | Msa0577580:intron | 10.0% |
| !!! | TTAACATTTTTTTTTAACAT+TGG | + | chr4_1:81918224-81918243 | Msa0577580:intron | 10.0% |
| !!! | TAACATTTTTTTTTTTAAGA+AGG | + | chr4_1:81918289-81918308 | Msa0577580:intron | 10.0% |
| !!! | TATTATGGATATTTTTTTAA+GGG | + | chr4_1:81923341-81923360 | Msa0577580:intron | 10.0% |
| !! | ATTAACATTCTTTATGTAAT+TGG | + | chr4_1:81918318-81918337 | Msa0577580:intron | 15.0% |
| !! | AATTTATGTAAAAGATATCT+TGG | + | chr4_1:81919156-81919175 | Msa0577580:intron | 15.0% |
| !! | ATTTATGTAAAAGATATCTT+GGG | + | chr4_1:81919157-81919176 | Msa0577580:intron | 15.0% |
| !!! | AAACTTAACTGATTTTTTAT+TGG | + | chr4_1:81921393-81921412 | Msa0577580:intron | 15.0% |
| !! | TTATCAAATAAAACTCAAAA+CGG | - | chr4_1:81921758-81921777 | None:intergenic | 15.0% |
| !! | TATTGAATATATTCTAATTG+TGG | + | chr4_1:81921966-81921985 | Msa0577580:intron | 15.0% |
| !! | GTATAACACAAAATAATTAT+CGG | - | chr4_1:81922082-81922101 | None:intergenic | 15.0% |
| !! | AAAAGGTTAAAATAGAAATA+AGG | - | chr4_1:81922173-81922192 | None:intergenic | 15.0% |
| !!! | TTCTTATTTATATAGAAATG+AGG | + | chr4_1:81922470-81922489 | Msa0577580:intron | 15.0% |
| !!! | CTATTATGGATATTTTTTTA+AGG | + | chr4_1:81923340-81923359 | Msa0577580:intron | 15.0% |
| !! | TTGCTATAACTAAATTTATT+AGG | - | chr4_1:81923762-81923781 | None:intergenic | 15.0% |
| !!! | AAATATCAACAAGTTTTTAT+AGG | + | chr4_1:81924212-81924231 | Msa0577580:three_prime_UTR | 15.0% |
| !! | TAGAACAGAAAACTAAAAAA+GGG | - | chr4_1:81917896-81917915 | None:intergenic | 20.0% |
| !! | ATAGAACAGAAAACTAAAAA+AGG | - | chr4_1:81917696-81917715 | None:intergenic | 20.0% |
| !! | TTGTTAAATAGAAACTATAG+TGG | - | chr4_1:81918116-81918135 | None:intergenic | 20.0% |
| !! | TTTATGTAAAAGATATCTTG+GGG | + | chr4_1:81919158-81919177 | Msa0577580:intron | 20.0% |
| !! | AAAAAAGAAAAGGAAATGAT+AGG | - | chr4_1:81919325-81919344 | None:intergenic | 20.0% |
| !! | CAGAATTGAAACATAATTAA+AGG | - | chr4_1:81919941-81919960 | None:intergenic | 20.0% |
| !! | AAATAAATGTATATGCACAA+AGG | - | chr4_1:81920840-81920859 | None:intergenic | 20.0% |
| !! | GATTAATTAATTGTAAGATC+TGG | + | chr4_1:81921280-81921299 | Msa0577580:intron | 20.0% |
| !! | ATGTATCTAATTCATAAATC+AGG | - | chr4_1:81921729-81921748 | None:intergenic | 20.0% |
| !!! | ATAAATAATTTTTTGGCTTG+TGG | + | chr4_1:81921774-81921793 | Msa0577580:intron | 20.0% |
| !! | AACGTATATAATTTAATAGC+AGG | - | chr4_1:81921840-81921859 | None:intergenic | 20.0% |
| !! | TGCTATTAAATTATATACGT+TGG | + | chr4_1:81921839-81921858 | Msa0577580:intron | 20.0% |
| !! | TTGAGCAAATAAAAAACAAA+AGG | - | chr4_1:81922366-81922385 | None:intergenic | 20.0% |
| !! | ATATCAGATATTAAGTTCAA+AGG | - | chr4_1:81922909-81922928 | None:intergenic | 20.0% |
| !! | TGAACTTAATATCTGATATA+TGG | + | chr4_1:81922910-81922929 | Msa0577580:intron | 20.0% |
| !! | GAACTTAATATCTGATATAT+GGG | + | chr4_1:81922911-81922930 | Msa0577580:intron | 20.0% |
| !!! | ATATGTTTTTTCTTGCAATA+TGG | + | chr4_1:81923170-81923189 | Msa0577580:intron | 20.0% |
| !!! | TATGTTTTTTCTTGCAATAT+GGG | + | chr4_1:81923171-81923190 | Msa0577580:intron | 20.0% |
| !!! | ATTTTTTTAAGGGTATATTC+TGG | + | chr4_1:81923351-81923370 | Msa0577580:intron | 20.0% |
| !! | ATTCATATTATAGAACTGTT+AGG | - | chr4_1:81923630-81923649 | None:intergenic | 20.0% |
| !!! | TCATTATTTTTTGATACAGA+AGG | + | chr4_1:81923727-81923746 | Msa0577580:intron | 20.0% |
| ! | CTGTTCTATGCAATTTAAAA+AGG | + | chr4_1:81917908-81917927 | Msa0577580:intron | 25.0% |
| ! | ATAAATAAGAGATTGCAAGA+AGG | + | chr4_1:81918194-81918213 | Msa0577580:intron | 25.0% |
| ! | TTGTCTGAAAAATTGTCATT+CGG | - | chr4_1:81918387-81918406 | None:intergenic | 25.0% |
| ! | TATTGAATAACTTAGAGATG+TGG | - | chr4_1:81918465-81918484 | None:intergenic | 25.0% |
| ! | ATGAAAACCAATGAAACAAA+TGG | - | chr4_1:81918760-81918779 | None:intergenic | 25.0% |
| ! | TCAATGATCATTTACAGTAT+TGG | + | chr4_1:81918960-81918979 | Msa0577580:intron | 25.0% |
| ! | TGTAAACTTCAAGAAGAAAA+AGG | - | chr4_1:81919261-81919280 | None:intergenic | 25.0% |
| ! | ATAGTGACAGAAAGTTAATA+GGG | - | chr4_1:81919390-81919409 | None:intergenic | 25.0% |
| ! | TATAGTGACAGAAAGTTAAT+AGG | - | chr4_1:81919391-81919410 | None:intergenic | 25.0% |
| ! | TCAGTTAGGTATTATAAAGT+CGG | + | chr4_1:81919423-81919442 | Msa0577580:intron | 25.0% |
| !! | AGTTGTTTGATATGTTTTCA+GGG | - | chr4_1:81919591-81919610 | None:intergenic | 25.0% |
| !! | AAGTTGTTTGATATGTTTTC+AGG | - | chr4_1:81919592-81919611 | None:intergenic | 25.0% |
| ! | ATTGAAATGTCATAAACACT+GGG | - | chr4_1:81919748-81919767 | None:intergenic | 25.0% |
| ! | TATTGAAATGTCATAAACAC+TGG | - | chr4_1:81919749-81919768 | None:intergenic | 25.0% |
| !! | AATGTTCCAATATATTTTCC+AGG | + | chr4_1:81920065-81920084 | Msa0577580:intron | 25.0% |
| ! | AATTCTCCTGGAAAATATAT+TGG | - | chr4_1:81920074-81920093 | None:intergenic | 25.0% |
| ! | TCAACATCAATTAAAAGGAA+AGG | - | chr4_1:81920220-81920239 | None:intergenic | 25.0% |
| ! | TTAATTACCTGAGAAAAATC+AGG | - | chr4_1:81920291-81920310 | None:intergenic | 25.0% |
| !! | TTTTTCTCAGGTAATTAATG+TGG | + | chr4_1:81920293-81920312 | Msa0577580:intron | 25.0% |
| ! | ATCACATTAACTCCTAATAA+TGG | - | chr4_1:81920338-81920357 | None:intergenic | 25.0% |
| !!! | AAATACCTTTTTAGAGAACT+CGG | - | chr4_1:81920994-81921013 | None:intergenic | 25.0% |
| ! | AATAAACTGAATAGATAGAC+AGG | - | chr4_1:81921119-81921138 | None:intergenic | 25.0% |
| !! | ACAAATATATTCCTTTTGCA+GGG | + | chr4_1:81921444-81921463 | Msa0577580:intron | 25.0% |
| !!! | TTTTTGAAACTTATGACATG+CGG | - | chr4_1:81921546-81921565 | None:intergenic | 25.0% |
| ! | TCTAATTCATAAATCAGGTT+TGG | - | chr4_1:81921724-81921743 | None:intergenic | 25.0% |
| ! | ATAATCTACAAATCTATGAG+TGG | + | chr4_1:81921866-81921885 | Msa0577580:intron | 25.0% |
| !!! | CTTTTGTTATTTTATTGACC+CGG | + | chr4_1:81922188-81922207 | Msa0577580:intron | 25.0% |
| ! | AGTAAGCTGTAAGAAAATAT+AGG | - | chr4_1:81922328-81922347 | None:intergenic | 25.0% |
| ! | CAAATAAAAAACAAAAGGCA+TGG | - | chr4_1:81922361-81922380 | None:intergenic | 25.0% |
| ! | TTCCCTACAATCAAAATAAT+AGG | + | chr4_1:81922404-81922423 | Msa0577580:intron | 25.0% |
| ! | TCCCTACAATCAAAATAATA+GGG | + | chr4_1:81922405-81922424 | Msa0577580:intron | 25.0% |
| !!! | TCCCTATTATTTTGATTGTA+GGG | - | chr4_1:81922409-81922428 | None:intergenic | 25.0% |
| !!! | TTCCCTATTATTTTGATTGT+AGG | - | chr4_1:81922410-81922429 | None:intergenic | 25.0% |
| ! | AAACTCCTTTAACTCTATTT+GGG | - | chr4_1:81922442-81922461 | None:intergenic | 25.0% |
| ! | AAAACTCCTTTAACTCTATT+TGG | - | chr4_1:81922443-81922462 | None:intergenic | 25.0% |
| ! | TTAATGCATTGTAGAAACTT+AGG | + | chr4_1:81922603-81922622 | Msa0577580:intron | 25.0% |
| ! | AAAAAAAACATCAGAGAATG+AGG | - | chr4_1:81922704-81922723 | None:intergenic | 25.0% |
| ! | TCTTCACTGTTAAATTCAAA+AGG | - | chr4_1:81922754-81922773 | None:intergenic | 25.0% |
| ! | CAAAGGTTAAACCTAATAAT+TGG | - | chr4_1:81922892-81922911 | None:intergenic | 25.0% |
| ! | TAATTCATGATGACAATGAA+AGG | + | chr4_1:81923292-81923311 | Msa0577580:intron | 25.0% |
| ! | AAAATATCCATAATAGTACG+AGG | - | chr4_1:81923336-81923355 | None:intergenic | 25.0% |
| !!! | TTTTTTCTGATGTTAGATGA+AGG | + | chr4_1:81923403-81923422 | Msa0577580:intron | 25.0% |
| ! | TGTTTAACATCAAAAGGAAA+CGG | - | chr4_1:81923866-81923885 | None:intergenic | 25.0% |
| !! | TTAAACACAAAGGCATAAAA+TGG | + | chr4_1:81923879-81923898 | Msa0577580:intron | 25.0% |
| ! | TTGTTGATATTTATGATCGA+CGG | - | chr4_1:81924204-81924223 | None:intergenic | 25.0% |
| CAAATTATGATTCAAACCCT+AGG | - | chr4_1:81917131-81917150 | None:intergenic | 30.0% | |
| AGGGTTTGAATCATAATTTG+AGG | + | chr4_1:81917131-81917150 | Msa0577580:intron | 30.0% | |
| GGGTTTGAATCATAATTTGA+GGG | + | chr4_1:81917132-81917151 | Msa0577580:intron | 30.0% | |
| TTGAATGTAATCACTTGTGT+AGG | - | chr4_1:81917278-81917297 | None:intergenic | 30.0% | |
| ! | ACCAATTTTTCCATTTCATC+CGG | - | chr4_1:81917448-81917467 | None:intergenic | 30.0% |
| AACAGCATATGATTAAGCTT+TGG | - | chr4_1:81918148-81918167 | None:intergenic | 30.0% | |
| CTTAATCATATGCTGTTGTT+TGG | + | chr4_1:81918151-81918170 | Msa0577580:intron | 30.0% | |
| TTTAACATTGGTGAGTCAAT+TGG | + | chr4_1:81918236-81918255 | Msa0577580:intron | 30.0% | |
| CATTCTTTATGTAATTGGAG+TGG | + | chr4_1:81918323-81918342 | Msa0577580:intron | 30.0% | |
| CAATGTGTGTATAATATACG+TGG | - | chr4_1:81918361-81918380 | None:intergenic | 30.0% | |
| TGTCTGAAAAATTGTCATTC+GGG | - | chr4_1:81918386-81918405 | None:intergenic | 30.0% | |
| !! | CAATTTTTCAGACAAAAGCA+AGG | + | chr4_1:81918392-81918411 | Msa0577580:intron | 30.0% |
| AATAACTTAGAGATGTGGTT+TGG | - | chr4_1:81918460-81918479 | None:intergenic | 30.0% | |
| AATATTGACCTGTATGACTA+GGG | + | chr4_1:81918501-81918520 | Msa0577580:intron | 30.0% | |
| CAGTAGTTAGAAAACGAAAA+CGG | - | chr4_1:81918576-81918595 | None:intergenic | 30.0% | |
| ATGCAAAATACATGTGGTTA+AGG | - | chr4_1:81918618-81918637 | None:intergenic | 30.0% | |
| CTTGAAATGCAAAATACATG+TGG | - | chr4_1:81918624-81918643 | None:intergenic | 30.0% | |
| TGTTAACAATGTGGAATTTG+AGG | + | chr4_1:81918724-81918743 | Msa0577580:CDS | 30.0% | |
| CAGAGCATAAAAGAGAAATT+GGG | + | chr4_1:81918876-81918895 | Msa0577580:intron | 30.0% | |
| TAAAGGAATCCAAAGGAAAA+AGG | - | chr4_1:81919097-81919116 | None:intergenic | 30.0% | |
| TATAAGTCTGATGATCAGTT+AGG | + | chr4_1:81919409-81919428 | Msa0577580:intron | 30.0% | |
| !! | ATTTCTGTGCACTATTTTGA+AGG | + | chr4_1:81919455-81919474 | Msa0577580:intron | 30.0% |
| !! | TTTCTGTGCACTATTTTGAA+GGG | + | chr4_1:81919456-81919475 | Msa0577580:intron | 30.0% |
| !!! | GAAGTAGAAATGCTGTTTTT+AGG | + | chr4_1:81919484-81919503 | Msa0577580:intron | 30.0% |
| ! | TTCAGAAGTTTGTTTATGAG+TGG | + | chr4_1:81919508-81919527 | Msa0577580:intron | 30.0% |
| ! | TCAGAAGTTTGTTTATGAGT+GGG | + | chr4_1:81919509-81919528 | Msa0577580:intron | 30.0% |
| TGTCAGATTGAATAATCTTG+TGG | + | chr4_1:81919642-81919661 | Msa0577580:intron | 30.0% | |
| GTCAGATTGAATAATCTTGT+GGG | + | chr4_1:81919643-81919662 | Msa0577580:intron | 30.0% | |
| ! | GAACCTTTCTAAAAAATGCA+TGG | + | chr4_1:81919668-81919687 | Msa0577580:intron | 30.0% |
| !!! | ACTCCATGCATTTTTTAGAA+AGG | - | chr4_1:81919674-81919693 | None:intergenic | 30.0% |
| ! | TTTCTAAAAAATGCATGGAG+TGG | + | chr4_1:81919673-81919692 | Msa0577580:intron | 30.0% |
| TTCTAGATTAAGATGACATC+AGG | - | chr4_1:81919711-81919730 | None:intergenic | 30.0% | |
| TCTTCAAATGGTACCTATTT+GGG | - | chr4_1:81919786-81919805 | None:intergenic | 30.0% | |
| TTCTTCAAATGGTACCTATT+TGG | - | chr4_1:81919787-81919806 | None:intergenic | 30.0% | |
| ! | TTTTCTGTCTTCAGATTCTT+AGG | + | chr4_1:81920092-81920111 | Msa0577580:intron | 30.0% |
| TTTCTGTCTTCAGATTCTTA+GGG | + | chr4_1:81920093-81920112 | Msa0577580:intron | 30.0% | |
| TGCTATATTGTTGCAGAAAA+TGG | + | chr4_1:81920117-81920136 | Msa0577580:intron | 30.0% | |
| CCTAGTCAACATCAATTAAA+AGG | - | chr4_1:81920225-81920244 | None:intergenic | 30.0% | |
| !! | CCTTTTAATTGATGTTGACT+AGG | + | chr4_1:81920222-81920241 | Msa0577580:intron | 30.0% |
| GTTCATTTGTCACCATTATT+AGG | + | chr4_1:81920323-81920342 | Msa0577580:intron | 30.0% | |
| ATTAGGAGTTAATGTGATGT+TGG | + | chr4_1:81920340-81920359 | Msa0577580:intron | 30.0% | |
| AAATGTCAAGCTGCATTTAA+TGG | - | chr4_1:81920756-81920775 | None:intergenic | 30.0% | |
| TAATTGTAAGATCTGGTTGT+AGG | + | chr4_1:81921287-81921306 | Msa0577580:intron | 30.0% | |
| TATAACATCCGCCATAATTA+TGG | + | chr4_1:81921342-81921361 | Msa0577580:CDS | 30.0% | |
| ! | CACAAATATATTCCTTTTGC+AGG | + | chr4_1:81921443-81921462 | Msa0577580:intron | 30.0% |
| ! | CAAATATATTCCTTTTGCAG+GGG | + | chr4_1:81921445-81921464 | Msa0577580:intron | 30.0% |
| ! | ATAACCTTTTGACAGGAATA+GGG | - | chr4_1:81921600-81921619 | None:intergenic | 30.0% |
| ! | AATAACCTTTTGACAGGAAT+AGG | - | chr4_1:81921601-81921620 | None:intergenic | 30.0% |
| ! | TGATGAAATAACCTTTTGAC+AGG | - | chr4_1:81921607-81921626 | None:intergenic | 30.0% |
| CACCTATTAAACCAGTTAAA+TGG | + | chr4_1:81921685-81921704 | Msa0577580:intron | 30.0% | |
| ! | AGCCATTTAACTGGTTTAAT+AGG | - | chr4_1:81921690-81921709 | None:intergenic | 30.0% |
| CAAAGTCAAAAACTTATCAC+AGG | - | chr4_1:81922104-81922123 | None:intergenic | 30.0% | |
| CGGGTCAATAAAATAACAAA+AGG | - | chr4_1:81922190-81922209 | None:intergenic | 30.0% | |
| TTCAAAAAATGACCCACTAT+GGG | - | chr4_1:81922239-81922258 | None:intergenic | 30.0% | |
| ATTCAAAAAATGACCCACTA+TGG | - | chr4_1:81922240-81922259 | None:intergenic | 30.0% | |
| AAGCTGTAAGAAAATATAGG+TGG | - | chr4_1:81922325-81922344 | None:intergenic | 30.0% | |
| ! | TTGCTCAAATTGTGTGATTT+TGG | + | chr4_1:81922378-81922397 | Msa0577580:intron | 30.0% |
| ! | TGCTCAAATTGTGTGATTTT+GGG | + | chr4_1:81922379-81922398 | Msa0577580:intron | 30.0% |
| CTAGCTATGTATATAGCTTA+GGG | - | chr4_1:81922558-81922577 | None:intergenic | 30.0% | |
| TCTAGCTATGTATATAGCTT+AGG | - | chr4_1:81922559-81922578 | None:intergenic | 30.0% | |
| TACAATGCATTAAATGCATG+AGG | - | chr4_1:81922596-81922615 | None:intergenic | 30.0% | |
| !!! | ATGTTTTTTTTGCCTAGTCA+TGG | + | chr4_1:81922713-81922732 | Msa0577580:intron | 30.0% |
| !! | CACTGAAATATTGATTTGGA+TGG | - | chr4_1:81923010-81923029 | None:intergenic | 30.0% |
| ! | CTGTCACTGAAATATTGATT+TGG | - | chr4_1:81923014-81923033 | None:intergenic | 30.0% |
| TTTACTCTTTAGTCTACCTT+TGG | - | chr4_1:81923053-81923072 | None:intergenic | 30.0% | |
| ATCATAATTGCAAACTAGCT+TGG | + | chr4_1:81923112-81923131 | Msa0577580:intron | 30.0% | |
| !! | AGTTTTGTAAATCGCAATAC+AGG | - | chr4_1:81923231-81923250 | None:intergenic | 30.0% |
| !!! | TTTTTTTCACAAACACTCGT+AGG | - | chr4_1:81923264-81923283 | None:intergenic | 30.0% |
| AAACAAACCTCGTACTATTA+TGG | + | chr4_1:81923326-81923345 | Msa0577580:intron | 30.0% | |
| AACATCAGAAAAAACGATGT+GGG | - | chr4_1:81923397-81923416 | None:intergenic | 30.0% | |
| TAACATCAGAAAAAACGATG+TGG | - | chr4_1:81923398-81923417 | None:intergenic | 30.0% | |
| AATAGACATTTAAAGAGTCG+TGG | + | chr4_1:81923463-81923482 | Msa0577580:intron | 30.0% | |
| !! | TTTCAGGTTTAGAGTTTGAA+GGG | - | chr4_1:81923527-81923546 | None:intergenic | 30.0% |
| ATATAACCAGAAGGTTGAAA+AGG | + | chr4_1:81923573-81923592 | Msa0577580:intron | 30.0% | |
| TACTATTGCATAACAGTCAA+GGG | - | chr4_1:81923655-81923674 | None:intergenic | 30.0% | |
| TTACTATTGCATAACAGTCA+AGG | - | chr4_1:81923656-81923675 | None:intergenic | 30.0% | |
| ! | GAAAGCACAGAAAATAATCT+GGG | - | chr4_1:81923844-81923863 | None:intergenic | 30.0% |
| CCTTTGTGTTTAACATCAAA+AGG | - | chr4_1:81923872-81923891 | None:intergenic | 30.0% | |
| ! | CCTTTTGATGTTAAACACAA+AGG | + | chr4_1:81923869-81923888 | Msa0577580:intron | 30.0% |
| ! | AATGGAATTTGCCTTATTGT+TGG | + | chr4_1:81923897-81923916 | Msa0577580:intron | 30.0% |
| AGATTTAGCTACCAACAATA+AGG | - | chr4_1:81923911-81923930 | None:intergenic | 30.0% | |
| ! | ATCTGTGTTTTACACCATTT+AGG | + | chr4_1:81923927-81923946 | Msa0577580:intron | 30.0% |
| !! | TTCCAAAGCAATTCTAAGAT+GGG | + | chr4_1:81924013-81924032 | Msa0577580:three_prime_UTR | 30.0% |
| CTTGTAGGATAACTTATAAC+TGG | - | chr4_1:81924049-81924068 | None:intergenic | 30.0% | |
| TTATCCTACAAGTTTCTGAT+TGG | + | chr4_1:81924057-81924076 | Msa0577580:three_prime_UTR | 30.0% | |
| TATCCTACAAGTTTCTGATT+GGG | + | chr4_1:81924058-81924077 | Msa0577580:three_prime_UTR | 30.0% | |
| CTGCATGTAATATGATTGTA+GGG | + | chr4_1:81924152-81924171 | Msa0577580:three_prime_UTR | 30.0% | |
| TGTAATATGATTGTAGGGAA+TGG | + | chr4_1:81924157-81924176 | Msa0577580:three_prime_UTR | 30.0% | |
| TGTTGATATTTATGATCGAC+GGG | - | chr4_1:81924203-81924222 | None:intergenic | 30.0% | |
| ! | TCATACGTATAACTTTTAGC+AGG | + | chr4_1:81924274-81924293 | Msa0577580:three_prime_UTR | 30.0% |
| CGTTTGAGGAAAATAAGTTC+CGG | - | chr4_1:81916926-81916945 | None:intergenic | 35.0% | |
| TTTGTGTGTGTATGTGTTTG+AGG | + | chr4_1:81917190-81917209 | Msa0577580:intron | 35.0% | |
| ACCGGATGAAATGGAAAAAT+TGG | + | chr4_1:81917444-81917463 | Msa0577580:intron | 35.0% | |
| ! | GTCTCATGTTCATTTTCCAT+AGG | - | chr4_1:81917578-81917597 | None:intergenic | 35.0% |
| !! | TGCTTCTGAAATTCTGAACA+AGG | + | chr4_1:81917605-81917624 | Msa0577580:CDS | 35.0% |
| !! | TTAGTTTTCTGTTCTATGCG+AGG | + | chr4_1:81917699-81917718 | Msa0577580:intron | 35.0% |
| ! | TAGTTTTCTGTTCTATGCGA+GGG | + | chr4_1:81917700-81917719 | Msa0577580:intron | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | chr4_1:81917797-81917816 | None:intergenic | 35.0% |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr4_1:81917796-81917815 | Msa0577580:intron | 35.0% | |
| AAAACTAAAAAAGGGCAACC+CGG | - | chr4_1:81917888-81917907 | None:intergenic | 35.0% | |
| AACACTGGGATCACAAAAAA+GGG | - | chr4_1:81917938-81917957 | None:intergenic | 35.0% | |
| TATCCTTGATTGACAACACT+GGG | - | chr4_1:81917952-81917971 | None:intergenic | 35.0% | |
| ACTATAACACTATTGCAGAG+CGG | - | chr4_1:81918001-81918020 | None:intergenic | 35.0% | |
| TTGTACTATATAGCGTATCG+TGG | + | chr4_1:81918041-81918060 | Msa0577580:intron | 35.0% | |
| GTGTATAATATACGTGGATG+AGG | - | chr4_1:81918355-81918374 | None:intergenic | 35.0% | |
| GAATATTGACCTGTATGACT+AGG | + | chr4_1:81918500-81918519 | Msa0577580:intron | 35.0% | |
| ! | TTTTCTAACTACTGAAGCTC+AGG | + | chr4_1:81918582-81918601 | Msa0577580:CDS | 35.0% |
| ! | TGACATGCCATTTGTTTCAT+TGG | + | chr4_1:81918750-81918769 | Msa0577580:intron | 35.0% |
| ! | CTCTGGAAATCAAAAGATTC+AGG | - | chr4_1:81918861-81918880 | None:intergenic | 35.0% |
| ! | CCAATTTCTCTTTTATGCTC+TGG | - | chr4_1:81918878-81918897 | None:intergenic | 35.0% |
| CCAGAGCATAAAAGAGAAAT+TGG | + | chr4_1:81918875-81918894 | Msa0577580:intron | 35.0% | |
| TACATGCTAAAGGAATCCAA+AGG | - | chr4_1:81919104-81919123 | None:intergenic | 35.0% | |
| GTGCTTGATTTACATGCTAA+AGG | - | chr4_1:81919114-81919133 | None:intergenic | 35.0% | |
| ! | TTGTGCTGCTATTCTAATGT+AGG | + | chr4_1:81919204-81919223 | Msa0577580:intron | 35.0% |
| ! | TGTGCTGCTATTCTAATGTA+GGG | + | chr4_1:81919205-81919224 | Msa0577580:intron | 35.0% |
| CATCAGCTGCAAAAAAGAAA+AGG | - | chr4_1:81919335-81919354 | None:intergenic | 35.0% | |
| ! | AGCTGATGCTATCTTTTACA+AGG | + | chr4_1:81919347-81919366 | Msa0577580:intron | 35.0% |
| ! | CAGAAGTTTGTTTATGAGTG+GGG | + | chr4_1:81919510-81919529 | Msa0577580:intron | 35.0% |
| TCTGACATTCATTGTCATGA+TGG | - | chr4_1:81919629-81919648 | None:intergenic | 35.0% | |
| AGATTGAATAATCTTGTGGG+AGG | + | chr4_1:81919646-81919665 | Msa0577580:intron | 35.0% | |
| !! | AGTTCTGGAACTTCTTCAAA+TGG | - | chr4_1:81919798-81919817 | None:intergenic | 35.0% |
| CGTCAAGTGTTTATAAGTCA+AGG | + | chr4_1:81919828-81919847 | Msa0577580:CDS | 35.0% | |
| TGCTTATGTTGCAATGAATC+AGG | + | chr4_1:81919854-81919873 | Msa0577580:CDS | 35.0% | |
| TATGTTGCAATGAATCAGGT+TGG | + | chr4_1:81919858-81919877 | Msa0577580:intron | 35.0% | |
| TTCAATTCTGATTCCTTCAC+AGG | + | chr4_1:81919951-81919970 | Msa0577580:intron | 35.0% | |
| !! | TCCTTACAAACAGGTTTTGT+TGG | + | chr4_1:81920025-81920044 | Msa0577580:intron | 35.0% |
| ACCAACAAAACCTGTTTGTA+AGG | - | chr4_1:81920029-81920048 | None:intergenic | 35.0% | |
| !!! | AACAGGTTTTGTTGGTCATT+TGG | + | chr4_1:81920033-81920052 | Msa0577580:intron | 35.0% |
| ACTAGGTTTCATGTAGATTG+TGG | + | chr4_1:81920239-81920258 | Msa0577580:intron | 35.0% | |
| GAGTTAATGTGATGTTGGAT+TGG | + | chr4_1:81920345-81920364 | Msa0577580:intron | 35.0% | |
| GATCTCTTACCTTATCAAAC+AGG | - | chr4_1:81920483-81920502 | None:intergenic | 35.0% | |
| AGTCATAAACTACGATCCAT+AGG | + | chr4_1:81920503-81920522 | Msa0577580:intron | 35.0% | |
| GAATTGAGAAACACAACCTA+TGG | - | chr4_1:81920522-81920541 | None:intergenic | 35.0% | |
| AGGACAAATGAGACAAGAAA+AGG | - | chr4_1:81920620-81920639 | None:intergenic | 35.0% | |
| ! | ATTTCACACGCTTTTACATG+TGG | + | chr4_1:81920772-81920791 | Msa0577580:intron | 35.0% |
| ! | TTTCACACGCTTTTACATGT+GGG | + | chr4_1:81920773-81920792 | Msa0577580:intron | 35.0% |
| CAATAAGATAAGCTGCATCA+TGG | - | chr4_1:81920802-81920821 | None:intergenic | 35.0% | |
| CATGATGCAGCTTATCTTAT+TGG | + | chr4_1:81920800-81920819 | Msa0577580:intron | 35.0% | |
| ! | TTCTTTTCTCTGTAATGAGC+AGG | + | chr4_1:81920926-81920945 | Msa0577580:intron | 35.0% |
| ! | TCTTTTCTCTGTAATGAGCA+GGG | + | chr4_1:81920927-81920946 | Msa0577580:intron | 35.0% |
| TAGATAGACAGGCAGATTAA+AGG | - | chr4_1:81921108-81921127 | None:intergenic | 35.0% | |
| CAAGATGTCTAGAGAGATAT+GGG | - | chr4_1:81921193-81921212 | None:intergenic | 35.0% | |
| CTTCCTTTCCATAATTATGG+CGG | - | chr4_1:81921353-81921372 | None:intergenic | 35.0% | |
| GCCATAATTATGGAAAGGAA+GGG | + | chr4_1:81921352-81921371 | Msa0577580:CDS | 35.0% | |
| TCCCTTCCTTTCCATAATTA+TGG | - | chr4_1:81921356-81921375 | None:intergenic | 35.0% | |
| CTAATATTCTGATGCATGTC+AGG | + | chr4_1:81921566-81921585 | Msa0577580:intron | 35.0% | |
| ! | AAGGTTATTTCATCAACTCC+TGG | + | chr4_1:81921612-81921631 | Msa0577580:CDS | 35.0% |
| AGCTAAACTAGCCATTTAAC+TGG | - | chr4_1:81921699-81921718 | None:intergenic | 35.0% | |
| ATTCTAATTGTGGCAGAACT+TGG | + | chr4_1:81921976-81921995 | Msa0577580:intron | 35.0% | |
| TATTTCTCACTACGCAATGT+GGG | - | chr4_1:81922040-81922059 | None:intergenic | 35.0% | |
| ATATTTCTCACTACGCAATG+TGG | - | chr4_1:81922041-81922060 | None:intergenic | 35.0% | |
| GTTCTAATAGTGAGATCAGA+TGG | - | chr4_1:81922151-81922170 | None:intergenic | 35.0% | |
| TCAAAAAATGACCCACTATG+GGG | - | chr4_1:81922238-81922257 | None:intergenic | 35.0% | |
| CTTACAGCTTACTCTAGTAT+TGG | + | chr4_1:81922335-81922354 | Msa0577580:intron | 35.0% | |
| ! | GCTCAAATTGTGTGATTTTG+GGG | + | chr4_1:81922380-81922399 | Msa0577580:intron | 35.0% |
| ! | CTCAAATTGTGTGATTTTGG+GGG | + | chr4_1:81922381-81922400 | Msa0577580:intron | 35.0% |
| AGTCAAAGACAATTGCAACA+AGG | - | chr4_1:81922634-81922653 | None:intergenic | 35.0% | |
| ! | TGAACTGTTGGTAAACAAGT+AGG | - | chr4_1:81922680-81922699 | None:intergenic | 35.0% |
| ATAAACATCATGCCATGACT+AGG | - | chr4_1:81922728-81922747 | None:intergenic | 35.0% | |
| AGTGCGAAATAGACATTATC+AGG | + | chr4_1:81922840-81922859 | Msa0577580:CDS | 35.0% | |
| CGAAATAGACATTATCAGGT+AGG | + | chr4_1:81922844-81922863 | Msa0577580:intron | 35.0% | |
| CCTAATAATTGGAGTTCATC+AGG | - | chr4_1:81922881-81922900 | None:intergenic | 35.0% | |
| CCTGATGAACTCCAATTATT+AGG | + | chr4_1:81922878-81922897 | Msa0577580:intron | 35.0% | |
| ATGAAGAGCTTCAAATGTCA+AGG | - | chr4_1:81922961-81922980 | None:intergenic | 35.0% | |
| ! | TTGACATTTGAAGCTCTTCA+TGG | + | chr4_1:81922960-81922979 | Msa0577580:CDS | 35.0% |
| TCAAAAGATATTGCAGCCAA+AGG | + | chr4_1:81923034-81923053 | Msa0577580:CDS | 35.0% | |
| CATCTATAATTCGCAGGTAT+TGG | - | chr4_1:81923090-81923109 | None:intergenic | 35.0% | |
| TGATCACATCTATAATTCGC+AGG | - | chr4_1:81923096-81923115 | None:intergenic | 35.0% | |
| TTCTGATGTTAGATGAAGGT+CGG | + | chr4_1:81923407-81923426 | Msa0577580:intron | 35.0% | |
| !! | GTTTCAGGTTTAGAGTTTGA+AGG | - | chr4_1:81923528-81923547 | None:intergenic | 35.0% |
| TCAAACTCTAAACCTGAAAC+AGG | + | chr4_1:81923528-81923547 | Msa0577580:intron | 35.0% | |
| CATGTAGCAATATAACCAGA+AGG | + | chr4_1:81923564-81923583 | Msa0577580:intron | 35.0% | |
| AAGAGAATCTAACCTGTGAA+TGG | - | chr4_1:81923804-81923823 | None:intergenic | 35.0% | |
| ! | GGAAAGCACAGAAAATAATC+TGG | - | chr4_1:81923845-81923864 | None:intergenic | 35.0% |
| !! | TACACCATTTAGGTTGTTGT+TGG | + | chr4_1:81923937-81923956 | Msa0577580:intron | 35.0% |
| AGAACCAACAACAACCTAAA+TGG | - | chr4_1:81923944-81923963 | None:intergenic | 35.0% | |
| ! | CTTCCAAAGCAATTCTAAGA+TGG | + | chr4_1:81924012-81924031 | Msa0577580:three_prime_UTR | 35.0% |
| ATCCCATCTTAGAATTGCTT+TGG | - | chr4_1:81924018-81924037 | None:intergenic | 35.0% | |
| !! | AGCAATTCTAAGATGGGATT+AGG | + | chr4_1:81924019-81924038 | Msa0577580:three_prime_UTR | 35.0% |
| ATTCCCAATCAGAAACTTGT+AGG | - | chr4_1:81924064-81924083 | None:intergenic | 35.0% | |
| CCTACAATCATATTACATGC+AGG | - | chr4_1:81924154-81924173 | None:intergenic | 35.0% | |
| CCTGCATGTAATATGATTGT+AGG | + | chr4_1:81924151-81924170 | Msa0577580:three_prime_UTR | 35.0% | |
| GTTGATATTTATGATCGACG+GGG | - | chr4_1:81924202-81924221 | None:intergenic | 35.0% | |
| GGAACGAAAACATCGAGAAA+TGG | - | chr4_1:81917110-81917129 | None:intergenic | 40.0% | |
| ! | TTCTCGATGTTTTCGTTCCT+AGG | + | chr4_1:81917111-81917130 | Msa0577580:intron | 40.0% |
| ! | TCTCGATGTTTTCGTTCCTA+GGG | + | chr4_1:81917112-81917131 | Msa0577580:intron | 40.0% |
| ! | TAGGTGTTTTGTCAAACACC+TGG | - | chr4_1:81917259-81917278 | None:intergenic | 40.0% |
| ! | TTGCTTGTTGCAGTTCTCAA+GGG | + | chr4_1:81917391-81917410 | Msa0577580:intron | 40.0% |
| GTAAAAACCTCATTTGCCAC+AGG | + | chr4_1:81917545-81917564 | Msa0577580:intron | 40.0% | |
| ! | AGTTTTCTGTTCTATGCGAG+GGG | + | chr4_1:81917701-81917720 | Msa0577580:intron | 40.0% |
| GTTGTTGTCATGTGACTGTA+AGG | + | chr4_1:81917746-81917765 | Msa0577580:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | + | chr4_1:81917790-81917809 | Msa0577580:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | + | chr4_1:81917791-81917810 | Msa0577580:intron | 40.0% | |
| CAACACTGGGATCACAAAAA+AGG | - | chr4_1:81917939-81917958 | None:intergenic | 40.0% | |
| CTATCCTTGATTGACAACAC+TGG | - | chr4_1:81917953-81917972 | None:intergenic | 40.0% | |
| GAGGAAATGGTTTCTCTCTA+TGG | + | chr4_1:81918531-81918550 | Msa0577580:CDS | 40.0% | |
| CGAATTTGACCTTACTTGCA+AGG | + | chr4_1:81918700-81918719 | Msa0577580:CDS | 40.0% | |
| TGTTAACAGCCTTGCAAGTA+AGG | - | chr4_1:81918712-81918731 | None:intergenic | 40.0% | |
| TTGCAAGGCTGTTAACAATG+TGG | + | chr4_1:81918715-81918734 | Msa0577580:CDS | 40.0% | |
| AAATCAAGCAACTGCTACCT+CGG | - | chr4_1:81919136-81919155 | None:intergenic | 40.0% | |
| TGCTATTCTAATGTAGGGCA+AGG | + | chr4_1:81919210-81919229 | Msa0577580:intron | 40.0% | |
| !! | TGCACTATTTTGAAGGGATG+AGG | + | chr4_1:81919462-81919481 | Msa0577580:intron | 40.0% |
| TCATAAACACTGGGTAGAGA+GGG | - | chr4_1:81919739-81919758 | None:intergenic | 40.0% | |
| CTTGCGTTTCATTCCCAAAT+AGG | + | chr4_1:81919770-81919789 | Msa0577580:intron | 40.0% | |
| AAGTTCCAGAACTTGTAGCT+CGG | + | chr4_1:81919805-81919824 | Msa0577580:CDS | 40.0% | |
| CTGAAGACAGAAAATTCTCC+TGG | - | chr4_1:81920086-81920105 | None:intergenic | 40.0% | |
| TGCAGAGGTTCTCAATCAAA+AGG | - | chr4_1:81920382-81920401 | None:intergenic | 40.0% | |
| GATATCTCAGCATACTCTCT+TGG | - | chr4_1:81920406-81920425 | None:intergenic | 40.0% | |
| ! | GAGGACCATCATTTAAAGCA+CGG | + | chr4_1:81920675-81920694 | Msa0577580:CDS | 40.0% |
| ! | TTCCACCGTGCTTTAAATGA+TGG | - | chr4_1:81920683-81920702 | None:intergenic | 40.0% |
| ! | ATCATTTAAAGCACGGTGGA+AGG | + | chr4_1:81920682-81920701 | Msa0577580:CDS | 40.0% |
| AAGAGAACACTGAAGACAGA+CGG | - | chr4_1:81920900-81920919 | None:intergenic | 40.0% | |
| AAAACGCAAGTGCATCATCA+AGG | - | chr4_1:81920965-81920984 | None:intergenic | 40.0% | |
| !!! | TTGATGATGCACTTGCGTTT+TGG | + | chr4_1:81920964-81920983 | Msa0577580:CDS | 40.0% |
| CCAAGATGTCTAGAGAGATA+TGG | - | chr4_1:81921194-81921213 | None:intergenic | 40.0% | |
| CCATATCTCTCTAGACATCT+TGG | + | chr4_1:81921191-81921210 | Msa0577580:intron | 40.0% | |
| TGTAAGATCTGGTTGTAGGT+TGG | + | chr4_1:81921291-81921310 | Msa0577580:intron | 40.0% | |
| CATCCGCCATAATTATGGAA+AGG | + | chr4_1:81921347-81921366 | Msa0577580:CDS | 40.0% | |
| CGCCATAATTATGGAAAGGA+AGG | + | chr4_1:81921351-81921370 | Msa0577580:CDS | 40.0% | |
| TACACCCTATTCCTGTCAAA+AGG | + | chr4_1:81921593-81921612 | Msa0577580:CDS | 40.0% | |
| ACTGACCTGAAATGTCGATA+GGG | - | chr4_1:81921660-81921679 | None:intergenic | 40.0% | |
| ATTTCTCACTACGCAATGTG+GGG | - | chr4_1:81922039-81922058 | None:intergenic | 40.0% | |
| CTGCACCCAAATAGAGTTAA+AGG | + | chr4_1:81922434-81922453 | Msa0577580:intron | 40.0% | |
| AGAGAATGAGGTTGAACTGT+TGG | - | chr4_1:81922692-81922711 | None:intergenic | 40.0% | |
| TTTGTCCATGACATCTTCCA+TGG | - | chr4_1:81922821-81922840 | None:intergenic | 40.0% | |
| CATAGAGCACATTGTACTTG+TGG | - | chr4_1:81923197-81923216 | None:intergenic | 40.0% | |
| ATTTAAAGAGTCGTGGTCTC+TGG | + | chr4_1:81923470-81923489 | Msa0577580:intron | 40.0% | |
| CATTCAACAGATCCTGTTTC+AGG | - | chr4_1:81923543-81923562 | None:intergenic | 40.0% | |
| CAGAAGGTTGAAAAGGAGAA+GGG | + | chr4_1:81923580-81923599 | Msa0577580:intron | 40.0% | |
| AGAAGGTTGAAAAGGAGAAG+GGG | + | chr4_1:81923581-81923600 | Msa0577580:intron | 40.0% | |
| GGTAGGTTGCATAACAGTTA+GGG | - | chr4_1:81923680-81923699 | None:intergenic | 40.0% | |
| AGGTAGGTTGCATAACAGTT+AGG | - | chr4_1:81923681-81923700 | None:intergenic | 40.0% | |
| GCTAGACAGAGATTATAGGT+AGG | - | chr4_1:81923697-81923716 | None:intergenic | 40.0% | |
| TCACGCTAGACAGAGATTAT+AGG | - | chr4_1:81923701-81923720 | None:intergenic | 40.0% | |
| TCTGGGAAAAAGAACACAGA+AGG | - | chr4_1:81923827-81923846 | None:intergenic | 40.0% | |
| TTGATGTATAGACGCAGACA+TGG | + | chr4_1:81923972-81923991 | Msa0577580:three_prime_UTR | 40.0% | |
| CAAGTTTCTGATTGGGAATC+TGG | + | chr4_1:81924065-81924084 | Msa0577580:three_prime_UTR | 40.0% | |
| TTGTTCATCATTGTAGCCAC+TGG | + | chr4_1:81924128-81924147 | Msa0577580:three_prime_UTR | 40.0% | |
| ACGGGGTTAACACAAATATC+AGG | - | chr4_1:81924185-81924204 | None:intergenic | 40.0% | |
| AATAAGTTCCGGTGACTCTG+AGG | - | chr4_1:81916915-81916934 | None:intergenic | 45.0% | |
| AGCGATAGAGGGGAATAGTT+GGG | - | chr4_1:81916962-81916981 | None:intergenic | 45.0% | |
| ! | GTTGCTTGTTGCAGTTCTCA+AGG | + | chr4_1:81917390-81917409 | Msa0577580:intron | 45.0% |
| ! | TGCTTGTTGCAGTTCTCAAG+GGG | + | chr4_1:81917392-81917411 | Msa0577580:intron | 45.0% |
| GTTCTCAAGGGGATTTCTGA+TGG | + | chr4_1:81917403-81917422 | Msa0577580:intron | 45.0% | |
| ! | ATTTCTGATGGTTTGTCGCG+AGG | + | chr4_1:81917415-81917434 | Msa0577580:intron | 45.0% |
| ! | TTTCTGATGGTTTGTCGCGA+GGG | + | chr4_1:81917416-81917435 | Msa0577580:intron | 45.0% |
| AGGGAAGAAACCGGATGAAA+TGG | + | chr4_1:81917435-81917454 | Msa0577580:intron | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | + | chr4_1:81917752-81917771 | Msa0577580:intron | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | + | chr4_1:81917753-81917772 | Msa0577580:intron | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr4_1:81917786-81917805 | None:intergenic | 45.0% |
| CGTACAATACACCAAGTGGT+GGG | + | chr4_1:81917822-81917841 | Msa0577580:intron | 45.0% | |
| GATCCCAGTGTTGTCAATCA+AGG | + | chr4_1:81917946-81917965 | Msa0577580:intron | 45.0% | |
| AGCGTATCGTGGAACAATAG+CGG | + | chr4_1:81918052-81918071 | Msa0577580:intron | 45.0% | |
| CACTATAGCGTAGCAGAGTT+TGG | - | chr4_1:81918083-81918102 | None:intergenic | 45.0% | |
| AACTCTGCTACGCTATAGTG+TGG | + | chr4_1:81918083-81918102 | Msa0577580:intron | 45.0% | |
| ATTGACCTGTATGACTAGGG+AGG | + | chr4_1:81918504-81918523 | Msa0577580:intron | 45.0% | |
| ATGATTTCCATGCACTGTGC+TGG | + | chr4_1:81919012-81919031 | Msa0577580:intron | 45.0% | |
| AAAAGGAAATGCGCCTTAGG+CGG | - | chr4_1:81919080-81919099 | None:intergenic | 45.0% | |
| GGAAAAAGGAAATGCGCCTT+AGG | - | chr4_1:81919083-81919102 | None:intergenic | 45.0% | |
| ! | GGCGCATTTCCTTTTTCCTT+TGG | + | chr4_1:81919085-81919104 | Msa0577580:intron | 45.0% |
| ! | AGCATGTAAATCAAGCACCG+AGG | + | chr4_1:81919116-81919135 | Msa0577580:intron | 45.0% |
| CATAAACACTGGGTAGAGAG+GGG | - | chr4_1:81919738-81919757 | None:intergenic | 45.0% | |
| GTCATAAACACTGGGTAGAG+AGG | - | chr4_1:81919740-81919759 | None:intergenic | 45.0% | |
| ACAAGCGAAACAACCTGTGA+AGG | - | chr4_1:81919967-81919986 | None:intergenic | 45.0% | |
| GTGTCTTTGACAACTGACTG+CGG | - | chr4_1:81920002-81920021 | None:intergenic | 45.0% | |
| AGACACTCGTCCTTACAAAC+AGG | + | chr4_1:81920016-81920035 | Msa0577580:CDS | 45.0% | |
| AACAGCGCAATCACACTTAC+AGG | - | chr4_1:81920182-81920201 | None:intergenic | 45.0% | |
| AGCCTTGAGCTCAAGTTATC+TGG | + | chr4_1:81920263-81920282 | Msa0577580:CDS | 45.0% | |
| GCCTTGAGCTCAAGTTATCT+GGG | + | chr4_1:81920264-81920283 | Msa0577580:CDS | 45.0% | |
| ACCCAGATAACTTGAGCTCA+AGG | - | chr4_1:81920268-81920287 | None:intergenic | 45.0% | |
| ! | TCTGGGTCCTGATTTTTCTC+AGG | + | chr4_1:81920281-81920300 | Msa0577580:CDS | 45.0% |
| CATGCGTCACCTGTTTGATA+AGG | + | chr4_1:81920471-81920490 | Msa0577580:CDS | 45.0% | |
| GGTGGCATAAATCAAGAGTC+AGG | - | chr4_1:81920640-81920659 | None:intergenic | 45.0% | |
| GTCCTCTTTCAGCTGCATAA+GGG | - | chr4_1:81920661-81920680 | None:intergenic | 45.0% | |
| ! | GACCATCATTTAAAGCACGG+TGG | + | chr4_1:81920678-81920697 | Msa0577580:CDS | 45.0% |
| TCAGACCAACCTTGAGAAAG+AGG | - | chr4_1:81920719-81920738 | None:intergenic | 45.0% | |
| AGAGAACACTGAAGACAGAC+GGG | - | chr4_1:81920899-81920918 | None:intergenic | 45.0% | |
| ! | GAGAGCCGAGTTCTCTAAAA+AGG | + | chr4_1:81920986-81921005 | Msa0577580:CDS | 45.0% |
| !! | GATCTGGTTGTAGGTTGGTT+TGG | + | chr4_1:81921296-81921315 | Msa0577580:intron | 45.0% |
| ATTTCATCAACTCCTGGTGC+TGG | + | chr4_1:81921618-81921637 | Msa0577580:CDS | 45.0% | |
| CTGACCTGAAATGTCGATAG+GGG | - | chr4_1:81921659-81921678 | None:intergenic | 45.0% | |
| GACTGACCTGAAATGTCGAT+AGG | - | chr4_1:81921661-81921680 | None:intergenic | 45.0% | |
| ! | TCGACATTTCAGGTCAGTCT+TGG | + | chr4_1:81921662-81921681 | Msa0577580:intron | 45.0% |
| !! | TTTGGCTTGTGGTGTCATAG+TGG | + | chr4_1:81921785-81921804 | Msa0577580:intron | 45.0% |
| !! | TTGGCTTGTGGTGTCATAGT+GGG | + | chr4_1:81921786-81921805 | Msa0577580:intron | 45.0% |
| TGGGGAAATGGTGTAGTAGT+GGG | - | chr4_1:81922220-81922239 | None:intergenic | 45.0% | |
| ATGGGGAAATGGTGTAGTAG+TGG | - | chr4_1:81922221-81922240 | None:intergenic | 45.0% | |
| ACTACACCATTTCCCCATAG+TGG | + | chr4_1:81922223-81922242 | Msa0577580:intron | 45.0% | |
| CTACACCATTTCCCCATAGT+GGG | + | chr4_1:81922224-81922243 | Msa0577580:intron | 45.0% | |
| AATGACCCACTATGGGGAAA+TGG | - | chr4_1:81922232-81922251 | None:intergenic | 45.0% | |
| TACAAACACCCACATGCAGT+GGG | + | chr4_1:81922653-81922672 | Msa0577580:intron | 45.0% | |
| ATGTGCTCTATGCTTACCTG+TGG | + | chr4_1:81923205-81923224 | Msa0577580:intron | 45.0% | |
| TAAATCGCAATACAGGCCAC+AGG | - | chr4_1:81923224-81923243 | None:intergenic | 45.0% | |
| CGATGTGGGATTTACGTCAT+AGG | - | chr4_1:81923383-81923402 | None:intergenic | 45.0% | |
| ! | GAGTTTGAAGGGCATAACAG+AGG | - | chr4_1:81923516-81923535 | None:intergenic | 45.0% |
| ! | CCTTCTCCTTTTCAACCTTC+TGG | - | chr4_1:81923582-81923601 | None:intergenic | 45.0% |
| CCAGAAGGTTGAAAAGGAGA+AGG | + | chr4_1:81923579-81923598 | Msa0577580:intron | 45.0% | |
| GAAGGTTGAAAAGGAGAAGG+GGG | + | chr4_1:81923582-81923601 | Msa0577580:intron | 45.0% | |
| !! | ATAGCAAGAGAGTGTTGTGC+TGG | + | chr4_1:81923775-81923794 | Msa0577580:three_prime_UTR | 45.0% |
| TTCTGATTGGGAATCTGGCA+CGG | + | chr4_1:81924070-81924089 | Msa0577580:three_prime_UTR | 45.0% | |
| TCATATTACATGCAGGCCAG+TGG | - | chr4_1:81924147-81924166 | None:intergenic | 45.0% | |
| !!! | TTATTTGATAAATAATTTTT+TGG | + | chr4_1:81921767-81921786 | Msa0577580:intron | 5.0% |
| TTGTTCGACCTCAGAGTCAC+CGG | + | chr4_1:81916904-81916923 | Msa0577580:CDS | 50.0% | |
| GGGAATAGTTGGGGCAGAAA+CGG | - | chr4_1:81916952-81916971 | None:intergenic | 50.0% | |
| GCGATAGAGGGGAATAGTTG+GGG | - | chr4_1:81916961-81916980 | None:intergenic | 50.0% | |
| GAGCGATAGAGGGGAATAGT+TGG | - | chr4_1:81916963-81916982 | None:intergenic | 50.0% | |
| TCGAGTCGAACTTCGAGTGA+CGG | - | chr4_1:81916990-81917009 | None:intergenic | 50.0% | |
| GAACGCGATTAGTACCTCTG+AGG | - | chr4_1:81917040-81917059 | None:intergenic | 50.0% | |
| TTTGTCGCGAGGGAAGAAAC+CGG | + | chr4_1:81917426-81917445 | Msa0577580:intron | 50.0% | |
| ACCTCATTTGCCACAGGTCA+AGG | + | chr4_1:81917551-81917570 | Msa0577580:intron | 50.0% | |
| TCCTTGACCTGTGGCAAATG+AGG | - | chr4_1:81917555-81917574 | None:intergenic | 50.0% | |
| TTCCATAGGTCCTTGACCTG+TGG | - | chr4_1:81917564-81917583 | None:intergenic | 50.0% | |
| TTCTATGCGAGGGGTAACCT+TGG | + | chr4_1:81917710-81917729 | Msa0577580:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr4_1:81917730-81917749 | None:intergenic | 50.0% | |
| GCTGCGTACAATACACCAAG+TGG | + | chr4_1:81917818-81917837 | Msa0577580:intron | 50.0% | |
| GCGTACAATACACCAAGTGG+TGG | + | chr4_1:81917821-81917840 | Msa0577580:intron | 50.0% | |
| CAAGTCCTCCCTAGTCATAC+AGG | - | chr4_1:81918512-81918531 | None:intergenic | 50.0% | |
| GTATGACTAGGGAGGACTTG+AGG | + | chr4_1:81918512-81918531 | Msa0577580:intron | 50.0% | |
| CTAGGGAGGACTTGAGGAAA+TGG | + | chr4_1:81918518-81918537 | Msa0577580:intron | 50.0% | |
| GGACAAGTTGCACGTTCCAT+GGG | + | chr4_1:81918897-81918916 | Msa0577580:CDS | 50.0% | |
| TTCACCCACAGGTAGGAAGA+CGG | + | chr4_1:81918926-81918945 | Msa0577580:intron | 50.0% | |
| AACACCGTCTTCCTACCTGT+GGG | - | chr4_1:81918933-81918952 | None:intergenic | 50.0% | |
| AAACACCGTCTTCCTACCTG+TGG | - | chr4_1:81918934-81918953 | None:intergenic | 50.0% | |
| ATTTCCATGCACTGTGCTGG+AGG | + | chr4_1:81919015-81919034 | Msa0577580:intron | 50.0% | |
| CACTGTGCTGGAGGTTGAAT+GGG | + | chr4_1:81919024-81919043 | Msa0577580:intron | 50.0% | |
| GCACAGAGGAAATGAGCTCT+TGG | - | chr4_1:81920452-81920471 | None:intergenic | 50.0% | |
| CTCTTTCAGCTGCATAAGGG+TGG | - | chr4_1:81920658-81920677 | None:intergenic | 50.0% | |
| CACCCTTATGCAGCTGAAAG+AGG | + | chr4_1:81920656-81920675 | Msa0577580:intron | 50.0% | |
| GGTCCTCTTTCAGCTGCATA+AGG | - | chr4_1:81920662-81920681 | None:intergenic | 50.0% | |
| GCAACTAGGCCTCTTTCTCA+AGG | + | chr4_1:81920707-81920726 | Msa0577580:CDS | 50.0% | |
| CTAGGCCTCTTTCTCAAGGT+TGG | + | chr4_1:81920711-81920730 | Msa0577580:intron | 50.0% | |
| AGAACACTGAAGACAGACGG+GGG | - | chr4_1:81920897-81920916 | None:intergenic | 50.0% | |
| GAGAACACTGAAGACAGACG+GGG | - | chr4_1:81920898-81920917 | None:intergenic | 50.0% | |
| CTCTGTAATGAGCAGGGTGT+TGG | + | chr4_1:81920933-81920952 | Msa0577580:intron | 50.0% | |
| TCGCAAAACACCCCTGCAAA+AGG | - | chr4_1:81921458-81921477 | None:intergenic | 50.0% | |
| CATGCGGCATAGCAACACAT+TGG | - | chr4_1:81921530-81921549 | None:intergenic | 50.0% | |
| GTTGCCCCTATCGACATTTC+AGG | + | chr4_1:81921652-81921671 | Msa0577580:CDS | 50.0% | |
| !! | TGGCTTGTGGTGTCATAGTG+GGG | + | chr4_1:81921787-81921806 | Msa0577580:intron | 50.0% |
| ! | TGTAGTAGTGGGGTTAGACC+GGG | - | chr4_1:81922209-81922228 | None:intergenic | 50.0% |
| ! | GTGTAGTAGTGGGGTTAGAC+CGG | - | chr4_1:81922210-81922229 | None:intergenic | 50.0% |
| GGGGAAATGGTGTAGTAGTG+GGG | - | chr4_1:81922219-81922238 | None:intergenic | 50.0% | |
| CTACAAACACCCACATGCAG+TGG | + | chr4_1:81922652-81922671 | Msa0577580:intron | 50.0% | |
| ACAAACACCCACATGCAGTG+GGG | + | chr4_1:81922654-81922673 | Msa0577580:intron | 50.0% | |
| AAGAGCTGCTCTCAGCAGAA+TGG | + | chr4_1:81922780-81922799 | Msa0577580:CDS | 50.0% | |
| AGAGCTGCTCTCAGCAGAAT+GGG | + | chr4_1:81922781-81922800 | Msa0577580:CDS | 50.0% | |
| TCGAGCCATGGAAGATGTCA+TGG | + | chr4_1:81922813-81922832 | Msa0577580:CDS | 50.0% | |
| ATGGCGTGCAATGTGATGCA+GGG | + | chr4_1:81922979-81922998 | Msa0577580:CDS | 50.0% | |
| TCGTGGTCTCTGGATGATGT+TGG | + | chr4_1:81923480-81923499 | Msa0577580:intron | 50.0% | |
| TGACGGAGCAGAGCGATAGA+GGG | - | chr4_1:81916973-81916992 | None:intergenic | 55.0% | |
| !! | AGTACCTCTGAGGCGATCGA+TGG | - | chr4_1:81917030-81917049 | None:intergenic | 55.0% |
| CTTCTGATCCAATGCGTGCC+AGG | + | chr4_1:81917238-81917257 | Msa0577580:intron | 55.0% | |
| GTCAAACACCTGGCACGCAT+TGG | - | chr4_1:81917249-81917268 | None:intergenic | 55.0% | |
| TGCCACAGGTCAAGGACCTA+TGG | + | chr4_1:81917559-81917578 | Msa0577580:intron | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr4_1:81917765-81917784 | Msa0577580:intron | 55.0% | |
| ! | TTTTGCCTGTGAGCGCACAG+AGG | + | chr4_1:81918666-81918685 | Msa0577580:intron | 55.0% |
| TTTGCCTGTGAGCGCACAGA+GGG | + | chr4_1:81918667-81918686 | Msa0577580:intron | 55.0% | |
| GGGACAAGTTGCACGTTCCA+TGG | + | chr4_1:81918896-81918915 | Msa0577580:CDS | 55.0% | |
| GTCTTCCTACCTGTGGGTGA+AGG | - | chr4_1:81918927-81918946 | None:intergenic | 55.0% | |
| TCAACCTCCAGCACAGTGCA+TGG | - | chr4_1:81919022-81919041 | None:intergenic | 55.0% | |
| GCACTGTGCTGGAGGTTGAA+TGG | + | chr4_1:81919023-81919042 | Msa0577580:intron | 55.0% | |
| GTGCTGGAGGTTGAATGGGT+AGG | + | chr4_1:81919028-81919047 | Msa0577580:intron | 55.0% | |
| TGACGCCGAGCTACAAGTTC+TGG | - | chr4_1:81919813-81919832 | None:intergenic | 55.0% | |
| CAACTGACTGCGGAATAGCG+TGG | - | chr4_1:81919992-81920011 | None:intergenic | 55.0% | |
| GCATACTCTCTTGGCTGCAG+AGG | - | chr4_1:81920397-81920416 | None:intergenic | 55.0% | |
| AACAGGTGACGCATGCACAG+AGG | - | chr4_1:81920466-81920485 | None:intergenic | 55.0% | |
| CACGGTGGAAGGATGCAACT+AGG | + | chr4_1:81920693-81920712 | Msa0577580:CDS | 55.0% | |
| CCATGATGATCTCCAGCACC+AGG | - | chr4_1:81921633-81921652 | None:intergenic | 55.0% | |
| ! | CCTGGTGCTGGAGATCATCA+TGG | + | chr4_1:81921630-81921649 | Msa0577580:CDS | 55.0% |
| AAGTAGGCCCCACTGCATGT+GGG | - | chr4_1:81922664-81922683 | None:intergenic | 55.0% | |
| GAGCTGCTCTCAGCAGAATG+GGG | + | chr4_1:81922782-81922801 | Msa0577580:CDS | 55.0% | |
| AGCTGCTCTCAGCAGAATGG+GGG | + | chr4_1:81922783-81922802 | Msa0577580:CDS | 55.0% | |
| CATGGCGTGCAATGTGATGC+AGG | + | chr4_1:81922978-81922997 | Msa0577580:CDS | 55.0% | |
| GGTTGAAAAGGAGAAGGGGG+TGG | + | chr4_1:81923585-81923604 | Msa0577580:intron | 55.0% | |
| !! | GCAAGAGAGTGTTGTGCTGG+TGG | + | chr4_1:81923778-81923797 | Msa0577580:three_prime_UTR | 55.0% |
| ! | TTGTGCTGGTGGCCATTCAC+AGG | + | chr4_1:81923789-81923808 | Msa0577580:three_prime_UTR | 55.0% |
| TGATTGGGAATCTGGCACGG+TGG | + | chr4_1:81924073-81924092 | Msa0577580:three_prime_UTR | 55.0% | |
| GGCAGAAACGGCGTCGTTTG+AGG | - | chr4_1:81916940-81916959 | None:intergenic | 60.0% | |
| GACGGAGCAGAGCGATAGAG+GGG | - | chr4_1:81916972-81916991 | None:intergenic | 60.0% | |
| ! | GTGACGGAGCAGAGCGATAG+AGG | - | chr4_1:81916974-81916993 | None:intergenic | 60.0% |
| ! | TCTGAGGCGATCGATGGCGT+AGG | - | chr4_1:81917024-81917043 | None:intergenic | 60.0% |
| TACGCCATCGATCGCCTCAG+AGG | + | chr4_1:81917023-81917042 | Msa0577580:intron | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr4_1:81917719-81917738 | Msa0577580:intron | 60.0% | |
| CTGAAGCTCCCGCATACGCA+GGG | - | chr4_1:81917861-81917880 | None:intergenic | 60.0% | |
| ACTGAAGCTCCCGCATACGC+AGG | - | chr4_1:81917862-81917881 | None:intergenic | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | + | chr4_1:81917866-81917885 | Msa0577580:intron | 60.0% | |
| TGTGGGTGAAGGCTGACCCA+TGG | - | chr4_1:81918916-81918935 | None:intergenic | 60.0% | |
| ATGGGTCAGCCTTCACCCAC+AGG | + | chr4_1:81918915-81918934 | Msa0577580:CDS | 60.0% | |
| GTCAGCCTTCACCCACAGGT+AGG | + | chr4_1:81918919-81918938 | Msa0577580:intron | 60.0% | |
| CCTTAGGCGGCAGCAACAAC+TGG | - | chr4_1:81919067-81919086 | None:intergenic | 60.0% | |
| CCAGTTGTTGCTGCCGCCTA+AGG | + | chr4_1:81919064-81919083 | Msa0577580:intron | 60.0% | |
| CAAGTAGGCCCCACTGCATG+TGG | - | chr4_1:81922665-81922684 | None:intergenic | 60.0% | |
| ! | CAAGTGGTGGGACCCCTTCC+CGG | + | chr4_1:81917834-81917853 | Msa0577580:intron | 65.0% |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr4_1:81917849-81917868 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | chr4_1:81917850-81917869 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | + | chr4_1:81917849-81917868 | Msa0577580:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | chr4_1:81917850-81917869 | Msa0577580:intron | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | + | chr4_1:81917867-81917886 | Msa0577580:intron | 65.0% | |
| ATCGCCCTCTGTGCGCTCAC+AGG | - | chr4_1:81918674-81918693 | None:intergenic | 65.0% | |
| GAGCGCACAGAGGGCGATCA+TGG | + | chr4_1:81918676-81918695 | Msa0577580:intron | 65.0% | |
| GGGGGTGAACAGTCGAGCCA+TGG | + | chr4_1:81922801-81922820 | Msa0577580:CDS | 65.0% | |
| CGGGAAGGGGTCCCACCACT+TGG | - | chr4_1:81917836-81917855 | None:intergenic | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | - | chr4_1:81917851-81917870 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | chr4_1:81917855-81917874 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | chr4_1:81917856-81917875 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 81916897 | 81924349 | 81916897 | ID=Msa0577580;Name=Msa0577580 |
| chr4_1 | mRNA | 81916897 | 81924349 | 81916897 | ID=Msa0577580-mRNA-1;Parent=Msa0577580;Name=Msa0577580-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.88|0.89|1|0.83|0.84|19|448|416 |
| chr4_1 | exon | 81916897 | 81916998 | 81916897 | ID=Msa0577580-mRNA-1:exon:29552;Parent=Msa0577580-mRNA-1 |
| chr4_1 | exon | 81917567 | 81917658 | 81917567 | ID=Msa0577580-mRNA-1:exon:29553;Parent=Msa0577580-mRNA-1 |
| chr4_1 | exon | 81918522 | 81918603 | 81918522 | ID=Msa0577580-mRNA-1:exon:29554;Parent=Msa0577580-mRNA-1 |
| chr4_1 | exon | 81918686 | 81918745 | 81918686 | ID=Msa0577580-mRNA-1:exon:29555;Parent=Msa0577580-mRNA-1 |
| chr4_1 | exon | 81918879 | 81918936 | 81918879 | ID=Msa0577580-mRNA-1:exon:29556;Parent=Msa0577580-mRNA-1 |
| chr4_1 | exon | 81919349 | 81919368 | 81919349 | ID=Msa0577580-mRNA-1:exon:29557;Parent=Msa0577580-mRNA-1 |
| chr4_1 | exon | 81919792 | 81919875 | 81919792 | ID=Msa0577580-mRNA-1:exon:29558;Parent=Msa0577580-mRNA-1 |
| chr4_1 | exon | 81919973 | 81920037 | 81919973 | ID=Msa0577580-mRNA-1:exon:29559;Parent=Msa0577580-mRNA-1 |
| chr4_1 | exon | 81920133 | 81920181 | 81920133 | ID=Msa0577580-mRNA-1:exon:29560;Parent=Msa0577580-mRNA-1 |
| chr4_1 | exon | 81920255 | 81920302 | 81920255 | ID=Msa0577580-mRNA-1:exon:29561;Parent=Msa0577580-mRNA-1 |
| chr4_1 | exon | 81920403 | 81920492 | 81920403 | ID=Msa0577580-mRNA-1:exon:29562;Parent=Msa0577580-mRNA-1 |
| chr4_1 | exon | 81920669 | 81920728 | 81920669 | ID=Msa0577580-mRNA-1:exon:29563;Parent=Msa0577580-mRNA-1 |
| chr4_1 | exon | 81920948 | 81921007 | 81920948 | ID=Msa0577580-mRNA-1:exon:29564;Parent=Msa0577580-mRNA-1 |
| chr4_1 | exon | 81921309 | 81921383 | 81921309 | ID=Msa0577580-mRNA-1:exon:29565;Parent=Msa0577580-mRNA-1 |
| chr4_1 | exon | 81921588 | 81921673 | 81921588 | ID=Msa0577580-mRNA-1:exon:29566;Parent=Msa0577580-mRNA-1 |
| chr4_1 | exon | 81922768 | 81922861 | 81922768 | ID=Msa0577580-mRNA-1:exon:29567;Parent=Msa0577580-mRNA-1 |
| chr4_1 | exon | 81922948 | 81923055 | 81922948 | ID=Msa0577580-mRNA-1:exon:29568;Parent=Msa0577580-mRNA-1 |
| chr4_1 | exon | 81923746 | 81923810 | 81923746 | ID=Msa0577580-mRNA-1:exon:29569;Parent=Msa0577580-mRNA-1 |
| chr4_1 | exon | 81923949 | 81924349 | 81923949 | ID=Msa0577580-mRNA-1:exon:29570;Parent=Msa0577580-mRNA-1 |
| chr4_1 | CDS | 81916897 | 81916998 | 81916897 | ID=Msa0577580-mRNA-1:cds;Parent=Msa0577580-mRNA-1 |
| chr4_1 | CDS | 81917567 | 81917658 | 81917567 | ID=Msa0577580-mRNA-1:cds;Parent=Msa0577580-mRNA-1 |
| chr4_1 | CDS | 81918522 | 81918603 | 81918522 | ID=Msa0577580-mRNA-1:cds;Parent=Msa0577580-mRNA-1 |
| chr4_1 | CDS | 81918686 | 81918745 | 81918686 | ID=Msa0577580-mRNA-1:cds;Parent=Msa0577580-mRNA-1 |
| chr4_1 | CDS | 81918879 | 81918936 | 81918879 | ID=Msa0577580-mRNA-1:cds;Parent=Msa0577580-mRNA-1 |
| chr4_1 | CDS | 81919349 | 81919368 | 81919349 | ID=Msa0577580-mRNA-1:cds;Parent=Msa0577580-mRNA-1 |
| chr4_1 | CDS | 81919792 | 81919875 | 81919792 | ID=Msa0577580-mRNA-1:cds;Parent=Msa0577580-mRNA-1 |
| chr4_1 | CDS | 81919973 | 81920037 | 81919973 | ID=Msa0577580-mRNA-1:cds;Parent=Msa0577580-mRNA-1 |
| chr4_1 | CDS | 81920133 | 81920181 | 81920133 | ID=Msa0577580-mRNA-1:cds;Parent=Msa0577580-mRNA-1 |
| chr4_1 | CDS | 81920255 | 81920302 | 81920255 | ID=Msa0577580-mRNA-1:cds;Parent=Msa0577580-mRNA-1 |
| chr4_1 | CDS | 81920403 | 81920492 | 81920403 | ID=Msa0577580-mRNA-1:cds;Parent=Msa0577580-mRNA-1 |
| chr4_1 | CDS | 81920669 | 81920728 | 81920669 | ID=Msa0577580-mRNA-1:cds;Parent=Msa0577580-mRNA-1 |
| chr4_1 | CDS | 81920948 | 81921007 | 81920948 | ID=Msa0577580-mRNA-1:cds;Parent=Msa0577580-mRNA-1 |
| chr4_1 | CDS | 81921309 | 81921383 | 81921309 | ID=Msa0577580-mRNA-1:cds;Parent=Msa0577580-mRNA-1 |
| chr4_1 | CDS | 81921588 | 81921673 | 81921588 | ID=Msa0577580-mRNA-1:cds;Parent=Msa0577580-mRNA-1 |
| chr4_1 | CDS | 81922768 | 81922861 | 81922768 | ID=Msa0577580-mRNA-1:cds;Parent=Msa0577580-mRNA-1 |
| chr4_1 | CDS | 81922948 | 81923055 | 81922948 | ID=Msa0577580-mRNA-1:cds;Parent=Msa0577580-mRNA-1 |
| chr4_1 | CDS | 81923746 | 81923763 | 81923746 | ID=Msa0577580-mRNA-1:cds;Parent=Msa0577580-mRNA-1 |
| chr4_1 | three_prime_UTR | 81923764 | 81923810 | 81923764 | ID=Msa0577580-mRNA-1:three_prime_utr;Parent=Msa0577580-mRNA-1 |
| chr4_1 | three_prime_UTR | 81923949 | 81924349 | 81923949 | ID=Msa0577580-mRNA-1:three_prime_utr;Parent=Msa0577580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
