Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306910 | XP_003630496.2 | 89.912 | 456 | 6 | 2 | 1 | 416 | 1 | 456 | 0.0 | 840 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306910 | sp|Q84WJ2|PRI2_ARATH | 66.519 | 451 | 108 | 3 | 1 | 411 | 1 | 448 | 0.0 | 619 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306910 | G7LHA9 | 89.912 | 456 | 6 | 2 | 1 | 416 | 1 | 456 | 0.0 | 840 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028420 | Msa1306910 | 0.813024 | 3.155711e-51 | -8.615850e-47 |
| Msa0042610 | Msa1306910 | 0.813217 | 2.862133e-51 | -8.615850e-47 |
| Msa0092790 | Msa1306910 | 0.809969 | 1.454846e-50 | -8.615850e-47 |
| Msa0658640 | Msa1306910 | 0.801390 | 9.209001e-49 | -8.615850e-47 |
| Msa0658880 | Msa1306910 | 0.813621 | 2.333295e-51 | -8.615850e-47 |
| Msa0704410 | Msa1306910 | 0.817840 | 2.675848e-52 | -8.615850e-47 |
| Msa0223080 | Msa1306910 | 0.810380 | 1.186367e-50 | -8.615850e-47 |
| Msa0225860 | Msa1306910 | 0.804930 | 1.705629e-49 | -8.615850e-47 |
| Msa1226520 | Msa1306910 | 0.804053 | 2.598491e-49 | -8.615850e-47 |
| Msa1306910 | Msa1421570 | 0.825894 | 3.654631e-54 | -8.615850e-47 |
| Msa1306910 | Msa1440880 | 0.824025 | 1.009103e-53 | -8.615850e-47 |
| Msa1306910 | Msa1446810 | 0.817145 | 3.837633e-52 | -8.615850e-47 |
| Msa1306910 | Msa1446820 | 0.807911 | 4.009838e-50 | -8.615850e-47 |
| Msa1306910 | Msa1466920 | 0.806553 | 7.780351e-50 | -8.615850e-47 |
| Msa1078150 | Msa1306910 | 0.806101 | 9.685571e-50 | -8.615850e-47 |
| Msa1103990 | Msa1306910 | 0.809848 | 1.544732e-50 | -8.615850e-47 |
| Msa0298470 | Msa1306910 | 0.832144 | 1.117862e-55 | -8.615850e-47 |
| Msa0302160 | Msa1306910 | 0.809308 | 2.017318e-50 | -8.615850e-47 |
| Msa0339490 | Msa1306910 | 0.810306 | 1.231033e-50 | -8.615850e-47 |
| Msa0546500 | Msa1306910 | 0.800920 | 1.149326e-48 | -8.615850e-47 |
| Msa0567170 | Msa1306910 | 0.803026 | 4.242944e-49 | -8.615850e-47 |
| Msa0577580 | Msa1306910 | 0.967389 | 3.282832e-127 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306910 | MtrunA17_Chr8g0377591 | 89.912 | 456 | 6 | 2 | 1 | 416 | 1 | 456 | 0.0 | 840 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306910 | AT1G67320.2 | 66.519 | 451 | 108 | 3 | 1 | 411 | 1 | 448 | 0.0 | 619 |
| Msa1306910 | AT1G67320.1 | 65.632 | 451 | 107 | 4 | 1 | 411 | 1 | 443 | 0.0 | 603 |
| Msa1306910 | AT1G67320.3 | 61.602 | 487 | 108 | 4 | 1 | 411 | 1 | 484 | 0.0 | 600 |
Find 118 sgRNAs with CRISPR-Local
Find 486 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGAGCATAAAAGAGAAAT+TGG | 0.138711 | 8_4:+1868991 | Msa1306910:intron |
| TCCCTTCCTTTCCATAATTA+TGG | 0.220230 | 8_4:-1871469 | None:intergenic |
| TTGCTATAACTAAATTTATT+AGG | 0.222324 | 8_4:-1873875 | None:intergenic |
| AGCCTTGAGCTCAAGTTATC+TGG | 0.232241 | 8_4:+1870379 | Msa1306910:CDS |
| TATAACATCCGCCATAATTA+TGG | 0.255773 | 8_4:+1871458 | Msa1306910:CDS |
| CAAGTTTCTGATTGGGAATC+TGG | 0.263174 | 8_4:+1874181 | Msa1306910:three_prime_UTR |
| GTTGCCCCTATCGACATTTC+AGG | 0.293155 | 8_4:+1871768 | Msa1306910:CDS |
| GAGGAAATGGTTTCTCTCTA+TGG | 0.294414 | 8_4:+1868647 | Msa1306910:CDS |
| GAGAGCCGAGTTCTCTAAAA+AGG | 0.304942 | 8_4:+1871102 | Msa1306910:CDS |
| TTGACATTTGAAGCTCTTCA+TGG | 0.327404 | 8_4:+1873076 | Msa1306910:CDS |
| GATCTGGTTGTAGGTTGGTT+TGG | 0.342053 | 8_4:+1871412 | Msa1306910:intron |
| CTTGTAGGATAACTTATAAC+TGG | 0.342717 | 8_4:-1874162 | None:intergenic |
| AGTGCGAAATAGACATTATC+AGG | 0.352267 | 8_4:+1872956 | Msa1306910:CDS |
| TTGATGATGCACTTGCGTTT+TGG | 0.353934 | 8_4:+1871080 | Msa1306910:CDS |
| TGACGCCGAGCTACAAGTTC+TGG | 0.360768 | 8_4:-1869926 | None:intergenic |
| ATCCCATCTTAGAATTGCTT+TGG | 0.372320 | 8_4:-1874131 | None:intergenic |
| CTGTCACTGAAATATTGATT+TGG | 0.378955 | 8_4:-1873127 | None:intergenic |
| TGTTAACAGCCTTGCAAGTA+AGG | 0.382732 | 8_4:-1868825 | None:intergenic |
| CTAGGGAGGACTTGAGGAAA+TGG | 0.396637 | 8_4:+1868634 | Msa1306910:intron |
| TACACCATTTAGGTTGTTGT+TGG | 0.402537 | 8_4:+1874053 | Msa1306910:intron |
| CTCTGTAATGAGCAGGGTGT+TGG | 0.406755 | 8_4:+1871049 | Msa1306910:intron |
| TGCTTATGTTGCAATGAATC+AGG | 0.414717 | 8_4:+1869970 | Msa1306910:CDS |
| CTTCCAAAGCAATTCTAAGA+TGG | 0.417323 | 8_4:+1874128 | Msa1306910:three_prime_UTR |
| TTATCCTACAAGTTTCTGAT+TGG | 0.418548 | 8_4:+1874173 | Msa1306910:three_prime_UTR |
| ATTCCCAATCAGAAACTTGT+AGG | 0.420560 | 8_4:-1874177 | None:intergenic |
| TATCCTACAAGTTTCTGATT+GGG | 0.430637 | 8_4:+1874174 | Msa1306910:three_prime_UTR |
| GTGACGGAGCAGAGCGATAG+AGG | 0.430657 | 8_4:-1867087 | None:intergenic |
| GGGACAAGTTGCACGTTCCA+TGG | 0.434809 | 8_4:+1869012 | Msa1306910:CDS |
| AGAGCTGCTCTCAGCAGAAT+GGG | 0.439491 | 8_4:+1872897 | Msa1306910:CDS |
| ACGGGGTTAACACAAATATC+AGG | 0.447122 | 8_4:-1874298 | None:intergenic |
| TTCCACCGTGCTTTAAATGA+TGG | 0.448238 | 8_4:-1870796 | None:intergenic |
| GAGCGATAGAGGGGAATAGT+TGG | 0.448946 | 8_4:-1867076 | None:intergenic |
| AGCGATAGAGGGGAATAGTT+GGG | 0.453515 | 8_4:-1867075 | None:intergenic |
| CCTGCATGTAATATGATTGT+AGG | 0.453609 | 8_4:+1874267 | Msa1306910:three_prime_UTR |
| GATCTCTTACCTTATCAAAC+AGG | 0.455618 | 8_4:-1870596 | None:intergenic |
| CGCCATAATTATGGAAAGGA+AGG | 0.456170 | 8_4:+1871467 | Msa1306910:CDS |
| GGGAATAGTTGGGGCAGAAA+CGG | 0.457960 | 8_4:-1867065 | None:intergenic |
| AGTTCTGGAACTTCTTCAAA+TGG | 0.461785 | 8_4:-1869911 | None:intergenic |
| GATATCTCAGCATACTCTCT+TGG | 0.469419 | 8_4:-1870519 | None:intergenic |
| GAGCGCACAGAGGGCGATCA+TGG | 0.469552 | 8_4:+1868792 | Msa1306910:intron |
| ACCAACAAAACCTGTTTGTA+AGG | 0.470128 | 8_4:-1870142 | None:intergenic |
| GGCAGAAACGGCGTCGTTTG+AGG | 0.472429 | 8_4:-1867053 | None:intergenic |
| TACACCCTATTCCTGTCAAA+AGG | 0.474573 | 8_4:+1871709 | Msa1306910:CDS |
| CAGAGCATAAAAGAGAAATT+GGG | 0.476213 | 8_4:+1868992 | Msa1306910:intron |
| CATGGCGTGCAATGTGATGC+AGG | 0.477569 | 8_4:+1873094 | Msa1306910:CDS |
| TGTTAACAATGTGGAATTTG+AGG | 0.479416 | 8_4:+1868840 | Msa1306910:CDS |
| CACCCTTATGCAGCTGAAAG+AGG | 0.484465 | 8_4:+1870772 | Msa1306910:intron |
| TCAGACCAACCTTGAGAAAG+AGG | 0.484615 | 8_4:-1870832 | None:intergenic |
| AGACACTCGTCCTTACAAAC+AGG | 0.485036 | 8_4:+1870132 | Msa1306910:CDS |
| TTGTTCATCATTGTAGCCAC+TGG | 0.485505 | 8_4:+1874244 | Msa1306910:three_prime_UTR |
| GCCTTGAGCTCAAGTTATCT+GGG | 0.487764 | 8_4:+1870380 | Msa1306910:CDS |
| ATTTCATCAACTCCTGGTGC+TGG | 0.488157 | 8_4:+1871734 | Msa1306910:CDS |
| TGTTGATATTTATGATCGAC+GGG | 0.493266 | 8_4:-1874316 | None:intergenic |
| CGAATTTGACCTTACTTGCA+AGG | 0.493943 | 8_4:+1868816 | Msa1306910:CDS |
| TTGTTGATATTTATGATCGA+CGG | 0.494327 | 8_4:-1874317 | None:intergenic |
| AAGAGCTGCTCTCAGCAGAA+TGG | 0.494662 | 8_4:+1872896 | Msa1306910:CDS |
| TTCCAAAGCAATTCTAAGAT+GGG | 0.496457 | 8_4:+1874129 | Msa1306910:three_prime_UTR |
| GCACAGAGGAAATGAGCTCT+TGG | 0.507469 | 8_4:-1870565 | None:intergenic |
| TGCCACAGGTCAAGGACCTA+TGG | 0.507509 | 8_4:+1867675 | Msa1306910:intron |
| CACTGAAATATTGATTTGGA+TGG | 0.508695 | 8_4:-1873123 | None:intergenic |
| TTTGTCCATGACATCTTCCA+TGG | 0.509838 | 8_4:-1872934 | None:intergenic |
| AAGGTTATTTCATCAACTCC+TGG | 0.524352 | 8_4:+1871728 | Msa1306910:CDS |
| ATCATTTAAAGCACGGTGGA+AGG | 0.524580 | 8_4:+1870798 | Msa1306910:CDS |
| AGCAATTCTAAGATGGGATT+AGG | 0.528456 | 8_4:+1874135 | Msa1306910:three_prime_UTR |
| TTGTGCTGGTGGCCATTCAC+AGG | 0.528478 | 8_4:+1873905 | Msa1306910:three_prime_UTR |
| TTGTTCGACCTCAGAGTCAC+CGG | 0.529835 | 8_4:+1867020 | Msa1306910:CDS |
| ATGGGTCAGCCTTCACCCAC+AGG | 0.534789 | 8_4:+1869031 | Msa1306910:CDS |
| ACTGACCTGAAATGTCGATA+GGG | 0.539707 | 8_4:-1871773 | None:intergenic |
| GGACAAGTTGCACGTTCCAT+GGG | 0.546912 | 8_4:+1869013 | Msa1306910:CDS |
| TGACGGAGCAGAGCGATAGA+GGG | 0.551287 | 8_4:-1867086 | None:intergenic |
| CGTCAAGTGTTTATAAGTCA+AGG | 0.552383 | 8_4:+1869944 | Msa1306910:CDS |
| GTCTTCCTACCTGTGGGTGA+AGG | 0.553325 | 8_4:-1869040 | None:intergenic |
| AAGAGAATCTAACCTGTGAA+TGG | 0.555184 | 8_4:-1873917 | None:intergenic |
| GCAACTAGGCCTCTTTCTCA+AGG | 0.555674 | 8_4:+1870823 | Msa1306910:CDS |
| CCATGATGATCTCCAGCACC+AGG | 0.555841 | 8_4:-1871746 | None:intergenic |
| CACGGTGGAAGGATGCAACT+AGG | 0.560175 | 8_4:+1870809 | Msa1306910:CDS |
| CGTTTGAGGAAAATAAGTTC+CGG | 0.562277 | 8_4:-1867039 | None:intergenic |
| ACCCAGATAACTTGAGCTCA+AGG | 0.568417 | 8_4:-1870381 | None:intergenic |
| CTTCCTTTCCATAATTATGG+CGG | 0.571599 | 8_4:-1871466 | None:intergenic |
| TCGAGCCATGGAAGATGTCA+TGG | 0.572780 | 8_4:+1872929 | Msa1306910:CDS |
| CATGCGTCACCTGTTTGATA+AGG | 0.572949 | 8_4:+1870587 | Msa1306910:CDS |
| CAGTAGTTAGAAAACGAAAA+CGG | 0.574427 | 8_4:-1868689 | None:intergenic |
| CCTGGTGCTGGAGATCATCA+TGG | 0.575225 | 8_4:+1871746 | Msa1306910:CDS |
| TTCTGATTGGGAATCTGGCA+CGG | 0.575280 | 8_4:+1874186 | Msa1306910:three_prime_UTR |
| AAAACGCAAGTGCATCATCA+AGG | 0.582984 | 8_4:-1871078 | None:intergenic |
| GCGATAGAGGGGAATAGTTG+GGG | 0.584876 | 8_4:-1867074 | None:intergenic |
| CCTACAATCATATTACATGC+AGG | 0.586719 | 8_4:-1874267 | None:intergenic |
| CTGCATGTAATATGATTGTA+GGG | 0.588740 | 8_4:+1874268 | Msa1306910:three_prime_UTR |
| TCAAAAGATATTGCAGCCAA+AGG | 0.599350 | 8_4:+1873150 | Msa1306910:CDS |
| CATCCGCCATAATTATGGAA+AGG | 0.599886 | 8_4:+1871463 | Msa1306910:CDS |
| TGTAATATGATTGTAGGGAA+TGG | 0.604744 | 8_4:+1874273 | Msa1306910:three_prime_UTR |
| GACGGAGCAGAGCGATAGAG+GGG | 0.606861 | 8_4:-1867085 | None:intergenic |
| ATGAAGAGCTTCAAATGTCA+AGG | 0.608226 | 8_4:-1873074 | None:intergenic |
| GAGCTGCTCTCAGCAGAATG+GGG | 0.613326 | 8_4:+1872898 | Msa1306910:CDS |
| TGCTTCTGAAATTCTGAACA+AGG | 0.615564 | 8_4:+1867721 | Msa1306910:CDS |
| ATAGCAAGAGAGTGTTGTGC+TGG | 0.616107 | 8_4:+1873891 | Msa1306910:three_prime_UTR |
| TCGAGTCGAACTTCGAGTGA+CGG | 0.617251 | 8_4:-1867103 | None:intergenic |
| GACTGACCTGAAATGTCGAT+AGG | 0.621390 | 8_4:-1871774 | None:intergenic |
| AAGTTCCAGAACTTGTAGCT+CGG | 0.624924 | 8_4:+1869921 | Msa1306910:CDS |
| TTGATGTATAGACGCAGACA+TGG | 0.626593 | 8_4:+1874088 | Msa1306910:three_prime_UTR |
| GTATGACTAGGGAGGACTTG+AGG | 0.628935 | 8_4:+1868628 | Msa1306910:intron |
| GCCATAATTATGGAAAGGAA+GGG | 0.636415 | 8_4:+1871468 | Msa1306910:CDS |
| TGTGGGTGAAGGCTGACCCA+TGG | 0.640159 | 8_4:-1869029 | None:intergenic |
| GCAAGAGAGTGTTGTGCTGG+TGG | 0.642778 | 8_4:+1873894 | Msa1306910:three_prime_UTR |
| GAGGACCATCATTTAAAGCA+CGG | 0.643728 | 8_4:+1870791 | Msa1306910:CDS |
| AGCTGCTCTCAGCAGAATGG+GGG | 0.643916 | 8_4:+1872899 | Msa1306910:CDS |
| AATAAGTTCCGGTGACTCTG+AGG | 0.644490 | 8_4:-1867028 | None:intergenic |
| TTGCAAGGCTGTTAACAATG+TGG | 0.645004 | 8_4:+1868831 | Msa1306910:CDS |
| TGATTGGGAATCTGGCACGG+TGG | 0.648811 | 8_4:+1874189 | Msa1306910:three_prime_UTR |
| TCATATTACATGCAGGCCAG+TGG | 0.650462 | 8_4:-1874260 | None:intergenic |
| CTGACCTGAAATGTCGATAG+GGG | 0.653528 | 8_4:-1871772 | None:intergenic |
| GCGTAAAAGACACTTGTGCA+TGG | 0.661706 | 8_4:-1874450 | None:intergenic |
| ATGGCGTGCAATGTGATGCA+GGG | 0.674376 | 8_4:+1873095 | Msa1306910:CDS |
| GTGTCTTTGACAACTGACTG+CGG | 0.690799 | 8_4:-1870115 | None:intergenic |
| CAACTGACTGCGGAATAGCG+TGG | 0.706102 | 8_4:-1870105 | None:intergenic |
| GACCATCATTTAAAGCACGG+TGG | 0.721859 | 8_4:+1870794 | Msa1306910:CDS |
| AACAGGTGACGCATGCACAG+AGG | 0.745591 | 8_4:-1870579 | None:intergenic |
| GTTGATATTTATGATCGACG+GGG | 0.765487 | 8_4:-1874315 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCATTTTTTCAAATAATTAT+CGG | + | chr8_4:1867419-1867438 | Msa1306910:intron | 10.0% |
| !!! | TTAACATTTTTTTTTAACAT+TGG | + | chr8_4:1868340-1868359 | Msa1306910:intron | 10.0% |
| !!! | TAACATTTTTTTTTTTAAGA+AGG | + | chr8_4:1868405-1868424 | Msa1306910:intron | 10.0% |
| !!! | TATTATGGATATTTTTTTAA+GGG | + | chr8_4:1873457-1873476 | Msa1306910:intron | 10.0% |
| !! | ATTAACATTCTTTATGTAAT+TGG | + | chr8_4:1868434-1868453 | Msa1306910:intron | 15.0% |
| !! | AATTTATGTAAAAGATATCT+TGG | + | chr8_4:1869272-1869291 | Msa1306910:intron | 15.0% |
| !! | ATTTATGTAAAAGATATCTT+GGG | + | chr8_4:1869273-1869292 | Msa1306910:intron | 15.0% |
| !!! | AAACTTAACTGATTTTTTAT+TGG | + | chr8_4:1871509-1871528 | Msa1306910:intron | 15.0% |
| !! | TTATCAAATAAAACTCAAAA+CGG | - | chr8_4:1871874-1871893 | None:intergenic | 15.0% |
| !! | TATTGAATATATTCTAATTG+TGG | + | chr8_4:1872082-1872101 | Msa1306910:intron | 15.0% |
| !! | GTATAACACAAAATAATTAT+CGG | - | chr8_4:1872198-1872217 | None:intergenic | 15.0% |
| !! | AAAAGGTTAAAATAGAAATA+AGG | - | chr8_4:1872289-1872308 | None:intergenic | 15.0% |
| !!! | TTCTTATTTATATAGAAATG+AGG | + | chr8_4:1872586-1872605 | Msa1306910:intron | 15.0% |
| !!! | CTATTATGGATATTTTTTTA+AGG | + | chr8_4:1873456-1873475 | Msa1306910:intron | 15.0% |
| !! | TTGCTATAACTAAATTTATT+AGG | - | chr8_4:1873878-1873897 | None:intergenic | 15.0% |
| !!! | AAATATCAACAAGTTTTTAT+AGG | + | chr8_4:1874328-1874347 | Msa1306910:three_prime_UTR | 15.0% |
| !! | TAGAACAGAAAACTAAAAAA+GGG | - | chr8_4:1868012-1868031 | None:intergenic | 20.0% |
| !! | ATAGAACAGAAAACTAAAAA+AGG | - | chr8_4:1867812-1867831 | None:intergenic | 20.0% |
| !! | TTGTTAAATAGAAACTATAG+TGG | - | chr8_4:1868232-1868251 | None:intergenic | 20.0% |
| !! | TTTATGTAAAAGATATCTTG+GGG | + | chr8_4:1869274-1869293 | Msa1306910:intron | 20.0% |
| !! | AAAAAAGAAAAGGAAATGAT+AGG | - | chr8_4:1869441-1869460 | None:intergenic | 20.0% |
| !! | CAGAATTGAAACATAATTAA+AGG | - | chr8_4:1870057-1870076 | None:intergenic | 20.0% |
| !! | AAATAAATGTATATGCACAA+AGG | - | chr8_4:1870956-1870975 | None:intergenic | 20.0% |
| !! | GATTAATTAATTGTAAGATC+TGG | + | chr8_4:1871396-1871415 | Msa1306910:intron | 20.0% |
| !! | ATGTATCTAATTCATAAATC+AGG | - | chr8_4:1871845-1871864 | None:intergenic | 20.0% |
| !!! | ATAAATAATTTTTTGGCTTG+TGG | + | chr8_4:1871890-1871909 | Msa1306910:intron | 20.0% |
| !! | AACGTATATAATTTAATAGC+AGG | - | chr8_4:1871956-1871975 | None:intergenic | 20.0% |
| !! | TGCTATTAAATTATATACGT+TGG | + | chr8_4:1871955-1871974 | Msa1306910:intron | 20.0% |
| !! | TTGAGCAAATAAAAAACAAA+AGG | - | chr8_4:1872482-1872501 | None:intergenic | 20.0% |
| !! | ATATCAGATATTAAGTTCAA+AGG | - | chr8_4:1873025-1873044 | None:intergenic | 20.0% |
| !! | TGAACTTAATATCTGATATA+TGG | + | chr8_4:1873026-1873045 | Msa1306910:intron | 20.0% |
| !! | GAACTTAATATCTGATATAT+GGG | + | chr8_4:1873027-1873046 | Msa1306910:intron | 20.0% |
| !!! | ATATGTTTTTTCTTGCAATA+TGG | + | chr8_4:1873286-1873305 | Msa1306910:intron | 20.0% |
| !!! | TATGTTTTTTCTTGCAATAT+GGG | + | chr8_4:1873287-1873306 | Msa1306910:intron | 20.0% |
| !!! | ATTTTTTTAAGGGTATATTC+TGG | + | chr8_4:1873467-1873486 | Msa1306910:intron | 20.0% |
| !! | ATTCATATTATAGAACTGTT+AGG | - | chr8_4:1873746-1873765 | None:intergenic | 20.0% |
| !!! | TCATTATTTTTTGATACAGA+AGG | + | chr8_4:1873843-1873862 | Msa1306910:intron | 20.0% |
| ! | CTGTTCTATGCAATTTAAAA+AGG | + | chr8_4:1868024-1868043 | Msa1306910:intron | 25.0% |
| ! | ATAAATAAGAGATTGCAAGA+AGG | + | chr8_4:1868310-1868329 | Msa1306910:intron | 25.0% |
| ! | TTGTCTGAAAAATTGTCATT+CGG | - | chr8_4:1868503-1868522 | None:intergenic | 25.0% |
| ! | TATTGAATAACTTAGAGATG+TGG | - | chr8_4:1868581-1868600 | None:intergenic | 25.0% |
| ! | ATGAAAACCAATGAAACAAA+TGG | - | chr8_4:1868876-1868895 | None:intergenic | 25.0% |
| ! | TCAATGATCATTTACAGTAT+TGG | + | chr8_4:1869076-1869095 | Msa1306910:intron | 25.0% |
| ! | TGTAAACTTCAAGAAGAAAA+AGG | - | chr8_4:1869377-1869396 | None:intergenic | 25.0% |
| ! | ATAGTGACAGAAAGTTAATA+GGG | - | chr8_4:1869506-1869525 | None:intergenic | 25.0% |
| ! | TATAGTGACAGAAAGTTAAT+AGG | - | chr8_4:1869507-1869526 | None:intergenic | 25.0% |
| ! | TCAGTTAGGTATTATAAAGT+CGG | + | chr8_4:1869539-1869558 | Msa1306910:intron | 25.0% |
| !! | AGTTGTTTGATATGTTTTCA+GGG | - | chr8_4:1869707-1869726 | None:intergenic | 25.0% |
| !! | AAGTTGTTTGATATGTTTTC+AGG | - | chr8_4:1869708-1869727 | None:intergenic | 25.0% |
| ! | ATTGAAATGTCATAAACACT+GGG | - | chr8_4:1869864-1869883 | None:intergenic | 25.0% |
| ! | TATTGAAATGTCATAAACAC+TGG | - | chr8_4:1869865-1869884 | None:intergenic | 25.0% |
| !! | AATGTTCCAATATATTTTCC+AGG | + | chr8_4:1870181-1870200 | Msa1306910:intron | 25.0% |
| ! | AATTCTCCTGGAAAATATAT+TGG | - | chr8_4:1870190-1870209 | None:intergenic | 25.0% |
| ! | TCAACATCAATTAAAAGGAA+AGG | - | chr8_4:1870336-1870355 | None:intergenic | 25.0% |
| ! | TTAATTACCTGAGAAAAATC+AGG | - | chr8_4:1870407-1870426 | None:intergenic | 25.0% |
| !! | TTTTTCTCAGGTAATTAATG+TGG | + | chr8_4:1870409-1870428 | Msa1306910:intron | 25.0% |
| ! | ATCACATTAACTCCTAATAA+TGG | - | chr8_4:1870454-1870473 | None:intergenic | 25.0% |
| !!! | AAATACCTTTTTAGAGAACT+CGG | - | chr8_4:1871110-1871129 | None:intergenic | 25.0% |
| ! | AATAAACTGAATAGATAGAC+AGG | - | chr8_4:1871235-1871254 | None:intergenic | 25.0% |
| !! | ACAAATATATTCCTTTTGCA+GGG | + | chr8_4:1871560-1871579 | Msa1306910:intron | 25.0% |
| !!! | TTTTTGAAACTTATGACATG+CGG | - | chr8_4:1871662-1871681 | None:intergenic | 25.0% |
| ! | TCTAATTCATAAATCAGGTT+TGG | - | chr8_4:1871840-1871859 | None:intergenic | 25.0% |
| ! | ATAATCTACAAATCTATGAG+TGG | + | chr8_4:1871982-1872001 | Msa1306910:intron | 25.0% |
| !!! | CTTTTGTTATTTTATTGACC+CGG | + | chr8_4:1872304-1872323 | Msa1306910:intron | 25.0% |
| ! | AGTAAGCTGTAAGAAAATAT+AGG | - | chr8_4:1872444-1872463 | None:intergenic | 25.0% |
| ! | CAAATAAAAAACAAAAGGCA+TGG | - | chr8_4:1872477-1872496 | None:intergenic | 25.0% |
| ! | TTCCCTACAATCAAAATAAT+AGG | + | chr8_4:1872520-1872539 | Msa1306910:intron | 25.0% |
| ! | TCCCTACAATCAAAATAATA+GGG | + | chr8_4:1872521-1872540 | Msa1306910:intron | 25.0% |
| !!! | TCCCTATTATTTTGATTGTA+GGG | - | chr8_4:1872525-1872544 | None:intergenic | 25.0% |
| !!! | TTCCCTATTATTTTGATTGT+AGG | - | chr8_4:1872526-1872545 | None:intergenic | 25.0% |
| ! | AAACTCCTTTAACTCTATTT+GGG | - | chr8_4:1872558-1872577 | None:intergenic | 25.0% |
| ! | AAAACTCCTTTAACTCTATT+TGG | - | chr8_4:1872559-1872578 | None:intergenic | 25.0% |
| ! | TTAATGCATTGTAGAAACTT+AGG | + | chr8_4:1872719-1872738 | Msa1306910:intron | 25.0% |
| ! | AAAAAAAACATCAGAGAATG+AGG | - | chr8_4:1872820-1872839 | None:intergenic | 25.0% |
| ! | TCTTCACTGTTAAATTCAAA+AGG | - | chr8_4:1872870-1872889 | None:intergenic | 25.0% |
| ! | CAAAGGTTAAACCTAATAAT+TGG | - | chr8_4:1873008-1873027 | None:intergenic | 25.0% |
| ! | TAATTCATGATGACAATGAA+AGG | + | chr8_4:1873408-1873427 | Msa1306910:intron | 25.0% |
| ! | AAAATATCCATAATAGTACG+AGG | - | chr8_4:1873452-1873471 | None:intergenic | 25.0% |
| !!! | TTTTTTCTGATGTTAGATGA+AGG | + | chr8_4:1873519-1873538 | Msa1306910:intron | 25.0% |
| ! | TGTTTAACATCAAAAGGAAA+CGG | - | chr8_4:1873982-1874001 | None:intergenic | 25.0% |
| !! | TTAAACACAAAGGCATAAAA+TGG | + | chr8_4:1873995-1874014 | Msa1306910:intron | 25.0% |
| ! | TTGTTGATATTTATGATCGA+CGG | - | chr8_4:1874320-1874339 | None:intergenic | 25.0% |
| CAAATTATGATTCAAACCCT+AGG | - | chr8_4:1867247-1867266 | None:intergenic | 30.0% | |
| AGGGTTTGAATCATAATTTG+AGG | + | chr8_4:1867247-1867266 | Msa1306910:intron | 30.0% | |
| GGGTTTGAATCATAATTTGA+GGG | + | chr8_4:1867248-1867267 | Msa1306910:intron | 30.0% | |
| TTGAATGTAATCACTTGTGT+AGG | - | chr8_4:1867394-1867413 | None:intergenic | 30.0% | |
| ! | ACCAATTTTTCCATTTCATC+CGG | - | chr8_4:1867564-1867583 | None:intergenic | 30.0% |
| AACAGCATATGATTAAGCTT+TGG | - | chr8_4:1868264-1868283 | None:intergenic | 30.0% | |
| CTTAATCATATGCTGTTGTT+TGG | + | chr8_4:1868267-1868286 | Msa1306910:intron | 30.0% | |
| TTTAACATTGGTGAGTCAAT+TGG | + | chr8_4:1868352-1868371 | Msa1306910:intron | 30.0% | |
| CATTCTTTATGTAATTGGAG+TGG | + | chr8_4:1868439-1868458 | Msa1306910:intron | 30.0% | |
| CAATGTGTGTATAATATACG+TGG | - | chr8_4:1868477-1868496 | None:intergenic | 30.0% | |
| TGTCTGAAAAATTGTCATTC+GGG | - | chr8_4:1868502-1868521 | None:intergenic | 30.0% | |
| !! | CAATTTTTCAGACAAAAGCA+AGG | + | chr8_4:1868508-1868527 | Msa1306910:intron | 30.0% |
| AATAACTTAGAGATGTGGTT+TGG | - | chr8_4:1868576-1868595 | None:intergenic | 30.0% | |
| AATATTGACCTGTATGACTA+GGG | + | chr8_4:1868617-1868636 | Msa1306910:intron | 30.0% | |
| CAGTAGTTAGAAAACGAAAA+CGG | - | chr8_4:1868692-1868711 | None:intergenic | 30.0% | |
| ATGCAAAATACATGTGGTTA+AGG | - | chr8_4:1868734-1868753 | None:intergenic | 30.0% | |
| CTTGAAATGCAAAATACATG+TGG | - | chr8_4:1868740-1868759 | None:intergenic | 30.0% | |
| TGTTAACAATGTGGAATTTG+AGG | + | chr8_4:1868840-1868859 | Msa1306910:CDS | 30.0% | |
| CAGAGCATAAAAGAGAAATT+GGG | + | chr8_4:1868992-1869011 | Msa1306910:intron | 30.0% | |
| TAAAGGAATCCAAAGGAAAA+AGG | - | chr8_4:1869213-1869232 | None:intergenic | 30.0% | |
| TATAAGTCTGATGATCAGTT+AGG | + | chr8_4:1869525-1869544 | Msa1306910:intron | 30.0% | |
| !! | ATTTCTGTGCACTATTTTGA+AGG | + | chr8_4:1869571-1869590 | Msa1306910:intron | 30.0% |
| !! | TTTCTGTGCACTATTTTGAA+GGG | + | chr8_4:1869572-1869591 | Msa1306910:intron | 30.0% |
| !!! | GAAGTAGAAATGCTGTTTTT+AGG | + | chr8_4:1869600-1869619 | Msa1306910:intron | 30.0% |
| ! | TTCAGAAGTTTGTTTATGAG+TGG | + | chr8_4:1869624-1869643 | Msa1306910:intron | 30.0% |
| ! | TCAGAAGTTTGTTTATGAGT+GGG | + | chr8_4:1869625-1869644 | Msa1306910:intron | 30.0% |
| TGTCAGATTGAATAATCTTG+TGG | + | chr8_4:1869758-1869777 | Msa1306910:intron | 30.0% | |
| GTCAGATTGAATAATCTTGT+GGG | + | chr8_4:1869759-1869778 | Msa1306910:intron | 30.0% | |
| ! | GAACCTTTCTAAAAAATGCA+TGG | + | chr8_4:1869784-1869803 | Msa1306910:intron | 30.0% |
| !!! | ACTCCATGCATTTTTTAGAA+AGG | - | chr8_4:1869790-1869809 | None:intergenic | 30.0% |
| ! | TTTCTAAAAAATGCATGGAG+TGG | + | chr8_4:1869789-1869808 | Msa1306910:intron | 30.0% |
| TTCTAGATTAAGATGACATC+AGG | - | chr8_4:1869827-1869846 | None:intergenic | 30.0% | |
| TCTTCAAATGGTACCTATTT+GGG | - | chr8_4:1869902-1869921 | None:intergenic | 30.0% | |
| TTCTTCAAATGGTACCTATT+TGG | - | chr8_4:1869903-1869922 | None:intergenic | 30.0% | |
| ! | TTTTCTGTCTTCAGATTCTT+AGG | + | chr8_4:1870208-1870227 | Msa1306910:intron | 30.0% |
| TTTCTGTCTTCAGATTCTTA+GGG | + | chr8_4:1870209-1870228 | Msa1306910:intron | 30.0% | |
| TGCTATATTGTTGCAGAAAA+TGG | + | chr8_4:1870233-1870252 | Msa1306910:intron | 30.0% | |
| CCTAGTCAACATCAATTAAA+AGG | - | chr8_4:1870341-1870360 | None:intergenic | 30.0% | |
| !! | CCTTTTAATTGATGTTGACT+AGG | + | chr8_4:1870338-1870357 | Msa1306910:intron | 30.0% |
| GTTCATTTGTCACCATTATT+AGG | + | chr8_4:1870439-1870458 | Msa1306910:intron | 30.0% | |
| ATTAGGAGTTAATGTGATGT+TGG | + | chr8_4:1870456-1870475 | Msa1306910:intron | 30.0% | |
| AAATGTCAAGCTGCATTTAA+TGG | - | chr8_4:1870872-1870891 | None:intergenic | 30.0% | |
| TAATTGTAAGATCTGGTTGT+AGG | + | chr8_4:1871403-1871422 | Msa1306910:intron | 30.0% | |
| TATAACATCCGCCATAATTA+TGG | + | chr8_4:1871458-1871477 | Msa1306910:CDS | 30.0% | |
| ! | CACAAATATATTCCTTTTGC+AGG | + | chr8_4:1871559-1871578 | Msa1306910:intron | 30.0% |
| ! | CAAATATATTCCTTTTGCAG+GGG | + | chr8_4:1871561-1871580 | Msa1306910:intron | 30.0% |
| ! | ATAACCTTTTGACAGGAATA+GGG | - | chr8_4:1871716-1871735 | None:intergenic | 30.0% |
| ! | AATAACCTTTTGACAGGAAT+AGG | - | chr8_4:1871717-1871736 | None:intergenic | 30.0% |
| ! | TGATGAAATAACCTTTTGAC+AGG | - | chr8_4:1871723-1871742 | None:intergenic | 30.0% |
| CACCTATTAAACCAGTTAAA+TGG | + | chr8_4:1871801-1871820 | Msa1306910:intron | 30.0% | |
| ! | AGCCATTTAACTGGTTTAAT+AGG | - | chr8_4:1871806-1871825 | None:intergenic | 30.0% |
| CAAAGTCAAAAACTTATCAC+AGG | - | chr8_4:1872220-1872239 | None:intergenic | 30.0% | |
| CGGGTCAATAAAATAACAAA+AGG | - | chr8_4:1872306-1872325 | None:intergenic | 30.0% | |
| TTCAAAAAATGACCCACTAT+GGG | - | chr8_4:1872355-1872374 | None:intergenic | 30.0% | |
| ATTCAAAAAATGACCCACTA+TGG | - | chr8_4:1872356-1872375 | None:intergenic | 30.0% | |
| AAGCTGTAAGAAAATATAGG+TGG | - | chr8_4:1872441-1872460 | None:intergenic | 30.0% | |
| ! | TTGCTCAAATTGTGTGATTT+TGG | + | chr8_4:1872494-1872513 | Msa1306910:intron | 30.0% |
| ! | TGCTCAAATTGTGTGATTTT+GGG | + | chr8_4:1872495-1872514 | Msa1306910:intron | 30.0% |
| CTAGCTATGTATATAGCTTA+GGG | - | chr8_4:1872674-1872693 | None:intergenic | 30.0% | |
| TCTAGCTATGTATATAGCTT+AGG | - | chr8_4:1872675-1872694 | None:intergenic | 30.0% | |
| TACAATGCATTAAATGCATG+AGG | - | chr8_4:1872712-1872731 | None:intergenic | 30.0% | |
| !!! | ATGTTTTTTTTGCCTAGTCA+TGG | + | chr8_4:1872829-1872848 | Msa1306910:intron | 30.0% |
| !! | CACTGAAATATTGATTTGGA+TGG | - | chr8_4:1873126-1873145 | None:intergenic | 30.0% |
| ! | CTGTCACTGAAATATTGATT+TGG | - | chr8_4:1873130-1873149 | None:intergenic | 30.0% |
| TTTACTCTTTAGTCTACCTT+TGG | - | chr8_4:1873169-1873188 | None:intergenic | 30.0% | |
| ATCATAATTGCAAACTAGCT+TGG | + | chr8_4:1873228-1873247 | Msa1306910:intron | 30.0% | |
| !! | AGTTTTGTAAATCGCAATAC+AGG | - | chr8_4:1873347-1873366 | None:intergenic | 30.0% |
| !!! | TTTTTTTCACAAACACTCGT+AGG | - | chr8_4:1873380-1873399 | None:intergenic | 30.0% |
| AAACAAACCTCGTACTATTA+TGG | + | chr8_4:1873442-1873461 | Msa1306910:intron | 30.0% | |
| AACATCAGAAAAAACGATGT+GGG | - | chr8_4:1873513-1873532 | None:intergenic | 30.0% | |
| TAACATCAGAAAAAACGATG+TGG | - | chr8_4:1873514-1873533 | None:intergenic | 30.0% | |
| AATAGACATTTAAAGAGTCG+TGG | + | chr8_4:1873579-1873598 | Msa1306910:intron | 30.0% | |
| !! | TTTCAGGTTTAGAGTTTGAA+GGG | - | chr8_4:1873643-1873662 | None:intergenic | 30.0% |
| ATATAACCAGAAGGTTGAAA+AGG | + | chr8_4:1873689-1873708 | Msa1306910:intron | 30.0% | |
| TACTATTGCATAACAGTCAA+GGG | - | chr8_4:1873771-1873790 | None:intergenic | 30.0% | |
| TTACTATTGCATAACAGTCA+AGG | - | chr8_4:1873772-1873791 | None:intergenic | 30.0% | |
| ! | GAAAGCACAGAAAATAATCT+GGG | - | chr8_4:1873960-1873979 | None:intergenic | 30.0% |
| CCTTTGTGTTTAACATCAAA+AGG | - | chr8_4:1873988-1874007 | None:intergenic | 30.0% | |
| ! | CCTTTTGATGTTAAACACAA+AGG | + | chr8_4:1873985-1874004 | Msa1306910:intron | 30.0% |
| ! | AATGGAATTTGCCTTATTGT+TGG | + | chr8_4:1874013-1874032 | Msa1306910:intron | 30.0% |
| AGATTTAGCTACCAACAATA+AGG | - | chr8_4:1874027-1874046 | None:intergenic | 30.0% | |
| ! | ATCTGTGTTTTACACCATTT+AGG | + | chr8_4:1874043-1874062 | Msa1306910:intron | 30.0% |
| !! | TTCCAAAGCAATTCTAAGAT+GGG | + | chr8_4:1874129-1874148 | Msa1306910:three_prime_UTR | 30.0% |
| CTTGTAGGATAACTTATAAC+TGG | - | chr8_4:1874165-1874184 | None:intergenic | 30.0% | |
| TTATCCTACAAGTTTCTGAT+TGG | + | chr8_4:1874173-1874192 | Msa1306910:three_prime_UTR | 30.0% | |
| TATCCTACAAGTTTCTGATT+GGG | + | chr8_4:1874174-1874193 | Msa1306910:three_prime_UTR | 30.0% | |
| CTGCATGTAATATGATTGTA+GGG | + | chr8_4:1874268-1874287 | Msa1306910:three_prime_UTR | 30.0% | |
| TGTAATATGATTGTAGGGAA+TGG | + | chr8_4:1874273-1874292 | Msa1306910:three_prime_UTR | 30.0% | |
| TGTTGATATTTATGATCGAC+GGG | - | chr8_4:1874319-1874338 | None:intergenic | 30.0% | |
| ! | TCATACGTATAACTTTTAGC+AGG | + | chr8_4:1874390-1874409 | Msa1306910:three_prime_UTR | 30.0% |
| CGTTTGAGGAAAATAAGTTC+CGG | - | chr8_4:1867042-1867061 | None:intergenic | 35.0% | |
| TTTGTGTGTGTATGTGTTTG+AGG | + | chr8_4:1867306-1867325 | Msa1306910:intron | 35.0% | |
| ACCGGATGAAATGGAAAAAT+TGG | + | chr8_4:1867560-1867579 | Msa1306910:intron | 35.0% | |
| ! | GTCTCATGTTCATTTTCCAT+AGG | - | chr8_4:1867694-1867713 | None:intergenic | 35.0% |
| !! | TGCTTCTGAAATTCTGAACA+AGG | + | chr8_4:1867721-1867740 | Msa1306910:CDS | 35.0% |
| !! | TTAGTTTTCTGTTCTATGCG+AGG | + | chr8_4:1867815-1867834 | Msa1306910:intron | 35.0% |
| ! | TAGTTTTCTGTTCTATGCGA+GGG | + | chr8_4:1867816-1867835 | Msa1306910:intron | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | chr8_4:1867913-1867932 | None:intergenic | 35.0% |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr8_4:1867912-1867931 | Msa1306910:intron | 35.0% | |
| AAAACTAAAAAAGGGCAACC+CGG | - | chr8_4:1868004-1868023 | None:intergenic | 35.0% | |
| AACACTGGGATCACAAAAAA+GGG | - | chr8_4:1868054-1868073 | None:intergenic | 35.0% | |
| TATCCTTGATTGACAACACT+GGG | - | chr8_4:1868068-1868087 | None:intergenic | 35.0% | |
| ACTATAACACTATTGCAGAG+CGG | - | chr8_4:1868117-1868136 | None:intergenic | 35.0% | |
| TTGTACTATATAGCGTATCG+TGG | + | chr8_4:1868157-1868176 | Msa1306910:intron | 35.0% | |
| GTGTATAATATACGTGGATG+AGG | - | chr8_4:1868471-1868490 | None:intergenic | 35.0% | |
| GAATATTGACCTGTATGACT+AGG | + | chr8_4:1868616-1868635 | Msa1306910:intron | 35.0% | |
| ! | TTTTCTAACTACTGAAGCTC+AGG | + | chr8_4:1868698-1868717 | Msa1306910:CDS | 35.0% |
| ! | TGACATGCCATTTGTTTCAT+TGG | + | chr8_4:1868866-1868885 | Msa1306910:intron | 35.0% |
| ! | CTCTGGAAATCAAAAGATTC+AGG | - | chr8_4:1868977-1868996 | None:intergenic | 35.0% |
| ! | CCAATTTCTCTTTTATGCTC+TGG | - | chr8_4:1868994-1869013 | None:intergenic | 35.0% |
| CCAGAGCATAAAAGAGAAAT+TGG | + | chr8_4:1868991-1869010 | Msa1306910:intron | 35.0% | |
| TACATGCTAAAGGAATCCAA+AGG | - | chr8_4:1869220-1869239 | None:intergenic | 35.0% | |
| GTGCTTGATTTACATGCTAA+AGG | - | chr8_4:1869230-1869249 | None:intergenic | 35.0% | |
| ! | TTGTGCTGCTATTCTAATGT+AGG | + | chr8_4:1869320-1869339 | Msa1306910:intron | 35.0% |
| ! | TGTGCTGCTATTCTAATGTA+GGG | + | chr8_4:1869321-1869340 | Msa1306910:intron | 35.0% |
| CATCAGCTGCAAAAAAGAAA+AGG | - | chr8_4:1869451-1869470 | None:intergenic | 35.0% | |
| ! | AGCTGATGCTATCTTTTACA+AGG | + | chr8_4:1869463-1869482 | Msa1306910:intron | 35.0% |
| ! | CAGAAGTTTGTTTATGAGTG+GGG | + | chr8_4:1869626-1869645 | Msa1306910:intron | 35.0% |
| TCTGACATTCATTGTCATGA+TGG | - | chr8_4:1869745-1869764 | None:intergenic | 35.0% | |
| AGATTGAATAATCTTGTGGG+AGG | + | chr8_4:1869762-1869781 | Msa1306910:intron | 35.0% | |
| !! | AGTTCTGGAACTTCTTCAAA+TGG | - | chr8_4:1869914-1869933 | None:intergenic | 35.0% |
| CGTCAAGTGTTTATAAGTCA+AGG | + | chr8_4:1869944-1869963 | Msa1306910:CDS | 35.0% | |
| TGCTTATGTTGCAATGAATC+AGG | + | chr8_4:1869970-1869989 | Msa1306910:CDS | 35.0% | |
| TATGTTGCAATGAATCAGGT+TGG | + | chr8_4:1869974-1869993 | Msa1306910:intron | 35.0% | |
| TTCAATTCTGATTCCTTCAC+AGG | + | chr8_4:1870067-1870086 | Msa1306910:intron | 35.0% | |
| !! | TCCTTACAAACAGGTTTTGT+TGG | + | chr8_4:1870141-1870160 | Msa1306910:intron | 35.0% |
| ACCAACAAAACCTGTTTGTA+AGG | - | chr8_4:1870145-1870164 | None:intergenic | 35.0% | |
| !!! | AACAGGTTTTGTTGGTCATT+TGG | + | chr8_4:1870149-1870168 | Msa1306910:intron | 35.0% |
| ACTAGGTTTCATGTAGATTG+TGG | + | chr8_4:1870355-1870374 | Msa1306910:intron | 35.0% | |
| GAGTTAATGTGATGTTGGAT+TGG | + | chr8_4:1870461-1870480 | Msa1306910:intron | 35.0% | |
| GATCTCTTACCTTATCAAAC+AGG | - | chr8_4:1870599-1870618 | None:intergenic | 35.0% | |
| AGTCATAAACTACGATCCAT+AGG | + | chr8_4:1870619-1870638 | Msa1306910:intron | 35.0% | |
| GAATTGAGAAACACAACCTA+TGG | - | chr8_4:1870638-1870657 | None:intergenic | 35.0% | |
| AGGACAAATGAGACAAGAAA+AGG | - | chr8_4:1870736-1870755 | None:intergenic | 35.0% | |
| ! | ATTTCACACGCTTTTACATG+TGG | + | chr8_4:1870888-1870907 | Msa1306910:intron | 35.0% |
| ! | TTTCACACGCTTTTACATGT+GGG | + | chr8_4:1870889-1870908 | Msa1306910:intron | 35.0% |
| CAATAAGATAAGCTGCATCA+TGG | - | chr8_4:1870918-1870937 | None:intergenic | 35.0% | |
| CATGATGCAGCTTATCTTAT+TGG | + | chr8_4:1870916-1870935 | Msa1306910:intron | 35.0% | |
| ! | TTCTTTTCTCTGTAATGAGC+AGG | + | chr8_4:1871042-1871061 | Msa1306910:intron | 35.0% |
| ! | TCTTTTCTCTGTAATGAGCA+GGG | + | chr8_4:1871043-1871062 | Msa1306910:intron | 35.0% |
| TAGATAGACAGGCAGATTAA+AGG | - | chr8_4:1871224-1871243 | None:intergenic | 35.0% | |
| CAAGATGTCTAGAGAGATAT+GGG | - | chr8_4:1871309-1871328 | None:intergenic | 35.0% | |
| CTTCCTTTCCATAATTATGG+CGG | - | chr8_4:1871469-1871488 | None:intergenic | 35.0% | |
| GCCATAATTATGGAAAGGAA+GGG | + | chr8_4:1871468-1871487 | Msa1306910:CDS | 35.0% | |
| TCCCTTCCTTTCCATAATTA+TGG | - | chr8_4:1871472-1871491 | None:intergenic | 35.0% | |
| CTAATATTCTGATGCATGTC+AGG | + | chr8_4:1871682-1871701 | Msa1306910:intron | 35.0% | |
| ! | AAGGTTATTTCATCAACTCC+TGG | + | chr8_4:1871728-1871747 | Msa1306910:CDS | 35.0% |
| AGCTAAACTAGCCATTTAAC+TGG | - | chr8_4:1871815-1871834 | None:intergenic | 35.0% | |
| ATTCTAATTGTGGCAGAACT+TGG | + | chr8_4:1872092-1872111 | Msa1306910:intron | 35.0% | |
| TATTTCTCACTACGCAATGT+GGG | - | chr8_4:1872156-1872175 | None:intergenic | 35.0% | |
| ATATTTCTCACTACGCAATG+TGG | - | chr8_4:1872157-1872176 | None:intergenic | 35.0% | |
| GTTCTAATAGTGAGATCAGA+TGG | - | chr8_4:1872267-1872286 | None:intergenic | 35.0% | |
| TCAAAAAATGACCCACTATG+GGG | - | chr8_4:1872354-1872373 | None:intergenic | 35.0% | |
| CTTACAGCTTACTCTAGTAT+TGG | + | chr8_4:1872451-1872470 | Msa1306910:intron | 35.0% | |
| ! | GCTCAAATTGTGTGATTTTG+GGG | + | chr8_4:1872496-1872515 | Msa1306910:intron | 35.0% |
| ! | CTCAAATTGTGTGATTTTGG+GGG | + | chr8_4:1872497-1872516 | Msa1306910:intron | 35.0% |
| AGTCAAAGACAATTGCAACA+AGG | - | chr8_4:1872750-1872769 | None:intergenic | 35.0% | |
| ! | TGAACTGTTGGTAAACAAGT+AGG | - | chr8_4:1872796-1872815 | None:intergenic | 35.0% |
| ATAAACATCATGCCATGACT+AGG | - | chr8_4:1872844-1872863 | None:intergenic | 35.0% | |
| AGTGCGAAATAGACATTATC+AGG | + | chr8_4:1872956-1872975 | Msa1306910:CDS | 35.0% | |
| CGAAATAGACATTATCAGGT+AGG | + | chr8_4:1872960-1872979 | Msa1306910:intron | 35.0% | |
| CCTAATAATTGGAGTTCATC+AGG | - | chr8_4:1872997-1873016 | None:intergenic | 35.0% | |
| CCTGATGAACTCCAATTATT+AGG | + | chr8_4:1872994-1873013 | Msa1306910:intron | 35.0% | |
| ATGAAGAGCTTCAAATGTCA+AGG | - | chr8_4:1873077-1873096 | None:intergenic | 35.0% | |
| ! | TTGACATTTGAAGCTCTTCA+TGG | + | chr8_4:1873076-1873095 | Msa1306910:CDS | 35.0% |
| TCAAAAGATATTGCAGCCAA+AGG | + | chr8_4:1873150-1873169 | Msa1306910:CDS | 35.0% | |
| CATCTATAATTCGCAGGTAT+TGG | - | chr8_4:1873206-1873225 | None:intergenic | 35.0% | |
| TGATCACATCTATAATTCGC+AGG | - | chr8_4:1873212-1873231 | None:intergenic | 35.0% | |
| TTCTGATGTTAGATGAAGGT+CGG | + | chr8_4:1873523-1873542 | Msa1306910:intron | 35.0% | |
| !! | GTTTCAGGTTTAGAGTTTGA+AGG | - | chr8_4:1873644-1873663 | None:intergenic | 35.0% |
| TCAAACTCTAAACCTGAAAC+AGG | + | chr8_4:1873644-1873663 | Msa1306910:intron | 35.0% | |
| CATGTAGCAATATAACCAGA+AGG | + | chr8_4:1873680-1873699 | Msa1306910:intron | 35.0% | |
| AAGAGAATCTAACCTGTGAA+TGG | - | chr8_4:1873920-1873939 | None:intergenic | 35.0% | |
| ! | GGAAAGCACAGAAAATAATC+TGG | - | chr8_4:1873961-1873980 | None:intergenic | 35.0% |
| !! | TACACCATTTAGGTTGTTGT+TGG | + | chr8_4:1874053-1874072 | Msa1306910:intron | 35.0% |
| AGAACCAACAACAACCTAAA+TGG | - | chr8_4:1874060-1874079 | None:intergenic | 35.0% | |
| ! | CTTCCAAAGCAATTCTAAGA+TGG | + | chr8_4:1874128-1874147 | Msa1306910:three_prime_UTR | 35.0% |
| ATCCCATCTTAGAATTGCTT+TGG | - | chr8_4:1874134-1874153 | None:intergenic | 35.0% | |
| !! | AGCAATTCTAAGATGGGATT+AGG | + | chr8_4:1874135-1874154 | Msa1306910:three_prime_UTR | 35.0% |
| ATTCCCAATCAGAAACTTGT+AGG | - | chr8_4:1874180-1874199 | None:intergenic | 35.0% | |
| CCTACAATCATATTACATGC+AGG | - | chr8_4:1874270-1874289 | None:intergenic | 35.0% | |
| CCTGCATGTAATATGATTGT+AGG | + | chr8_4:1874267-1874286 | Msa1306910:three_prime_UTR | 35.0% | |
| GTTGATATTTATGATCGACG+GGG | - | chr8_4:1874318-1874337 | None:intergenic | 35.0% | |
| GGAACGAAAACATCGAGAAA+TGG | - | chr8_4:1867226-1867245 | None:intergenic | 40.0% | |
| ! | TTCTCGATGTTTTCGTTCCT+AGG | + | chr8_4:1867227-1867246 | Msa1306910:intron | 40.0% |
| ! | TCTCGATGTTTTCGTTCCTA+GGG | + | chr8_4:1867228-1867247 | Msa1306910:intron | 40.0% |
| ! | TAGGTGTTTTGTCAAACACC+TGG | - | chr8_4:1867375-1867394 | None:intergenic | 40.0% |
| ! | TTGCTTGTTGCAGTTCTCAA+GGG | + | chr8_4:1867507-1867526 | Msa1306910:intron | 40.0% |
| GTAAAAACCTCATTTGCCAC+AGG | + | chr8_4:1867661-1867680 | Msa1306910:intron | 40.0% | |
| ! | AGTTTTCTGTTCTATGCGAG+GGG | + | chr8_4:1867817-1867836 | Msa1306910:intron | 40.0% |
| GTTGTTGTCATGTGACTGTA+AGG | + | chr8_4:1867862-1867881 | Msa1306910:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | + | chr8_4:1867906-1867925 | Msa1306910:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | + | chr8_4:1867907-1867926 | Msa1306910:intron | 40.0% | |
| CAACACTGGGATCACAAAAA+AGG | - | chr8_4:1868055-1868074 | None:intergenic | 40.0% | |
| CTATCCTTGATTGACAACAC+TGG | - | chr8_4:1868069-1868088 | None:intergenic | 40.0% | |
| GAGGAAATGGTTTCTCTCTA+TGG | + | chr8_4:1868647-1868666 | Msa1306910:CDS | 40.0% | |
| CGAATTTGACCTTACTTGCA+AGG | + | chr8_4:1868816-1868835 | Msa1306910:CDS | 40.0% | |
| TGTTAACAGCCTTGCAAGTA+AGG | - | chr8_4:1868828-1868847 | None:intergenic | 40.0% | |
| TTGCAAGGCTGTTAACAATG+TGG | + | chr8_4:1868831-1868850 | Msa1306910:CDS | 40.0% | |
| AAATCAAGCAACTGCTACCT+CGG | - | chr8_4:1869252-1869271 | None:intergenic | 40.0% | |
| TGCTATTCTAATGTAGGGCA+AGG | + | chr8_4:1869326-1869345 | Msa1306910:intron | 40.0% | |
| !! | TGCACTATTTTGAAGGGATG+AGG | + | chr8_4:1869578-1869597 | Msa1306910:intron | 40.0% |
| TCATAAACACTGGGTAGAGA+GGG | - | chr8_4:1869855-1869874 | None:intergenic | 40.0% | |
| CTTGCGTTTCATTCCCAAAT+AGG | + | chr8_4:1869886-1869905 | Msa1306910:intron | 40.0% | |
| AAGTTCCAGAACTTGTAGCT+CGG | + | chr8_4:1869921-1869940 | Msa1306910:CDS | 40.0% | |
| CTGAAGACAGAAAATTCTCC+TGG | - | chr8_4:1870202-1870221 | None:intergenic | 40.0% | |
| TGCAGAGGTTCTCAATCAAA+AGG | - | chr8_4:1870498-1870517 | None:intergenic | 40.0% | |
| GATATCTCAGCATACTCTCT+TGG | - | chr8_4:1870522-1870541 | None:intergenic | 40.0% | |
| ! | GAGGACCATCATTTAAAGCA+CGG | + | chr8_4:1870791-1870810 | Msa1306910:CDS | 40.0% |
| ! | TTCCACCGTGCTTTAAATGA+TGG | - | chr8_4:1870799-1870818 | None:intergenic | 40.0% |
| ! | ATCATTTAAAGCACGGTGGA+AGG | + | chr8_4:1870798-1870817 | Msa1306910:CDS | 40.0% |
| ATGAGAACACTGAAGACAGA+CGG | - | chr8_4:1871016-1871035 | None:intergenic | 40.0% | |
| AAAACGCAAGTGCATCATCA+AGG | - | chr8_4:1871081-1871100 | None:intergenic | 40.0% | |
| !!! | TTGATGATGCACTTGCGTTT+TGG | + | chr8_4:1871080-1871099 | Msa1306910:CDS | 40.0% |
| CCAAGATGTCTAGAGAGATA+TGG | - | chr8_4:1871310-1871329 | None:intergenic | 40.0% | |
| CCATATCTCTCTAGACATCT+TGG | + | chr8_4:1871307-1871326 | Msa1306910:intron | 40.0% | |
| TGTAAGATCTGGTTGTAGGT+TGG | + | chr8_4:1871407-1871426 | Msa1306910:intron | 40.0% | |
| CATCCGCCATAATTATGGAA+AGG | + | chr8_4:1871463-1871482 | Msa1306910:CDS | 40.0% | |
| CGCCATAATTATGGAAAGGA+AGG | + | chr8_4:1871467-1871486 | Msa1306910:CDS | 40.0% | |
| TACACCCTATTCCTGTCAAA+AGG | + | chr8_4:1871709-1871728 | Msa1306910:CDS | 40.0% | |
| ACTGACCTGAAATGTCGATA+GGG | - | chr8_4:1871776-1871795 | None:intergenic | 40.0% | |
| ATTTCTCACTACGCAATGTG+GGG | - | chr8_4:1872155-1872174 | None:intergenic | 40.0% | |
| CTGCACCCAAATAGAGTTAA+AGG | + | chr8_4:1872550-1872569 | Msa1306910:intron | 40.0% | |
| AGAGAATGAGGTTGAACTGT+TGG | - | chr8_4:1872808-1872827 | None:intergenic | 40.0% | |
| TTTGTCCATGACATCTTCCA+TGG | - | chr8_4:1872937-1872956 | None:intergenic | 40.0% | |
| CATAGAGCACATTGTACTTG+TGG | - | chr8_4:1873313-1873332 | None:intergenic | 40.0% | |
| ATTTAAAGAGTCGTGGTCTC+TGG | + | chr8_4:1873586-1873605 | Msa1306910:intron | 40.0% | |
| CATTCAACAGATCCTGTTTC+AGG | - | chr8_4:1873659-1873678 | None:intergenic | 40.0% | |
| CAGAAGGTTGAAAAGGAGAA+GGG | + | chr8_4:1873696-1873715 | Msa1306910:intron | 40.0% | |
| AGAAGGTTGAAAAGGAGAAG+GGG | + | chr8_4:1873697-1873716 | Msa1306910:intron | 40.0% | |
| GGTAGGTTGCATAACAGTTA+GGG | - | chr8_4:1873796-1873815 | None:intergenic | 40.0% | |
| AGGTAGGTTGCATAACAGTT+AGG | - | chr8_4:1873797-1873816 | None:intergenic | 40.0% | |
| GCTAGACAGAGATTATAGGT+AGG | - | chr8_4:1873813-1873832 | None:intergenic | 40.0% | |
| TCACGCTAGACAGAGATTAT+AGG | - | chr8_4:1873817-1873836 | None:intergenic | 40.0% | |
| TCTGGGAAAAAGAACACAGA+AGG | - | chr8_4:1873943-1873962 | None:intergenic | 40.0% | |
| TTGATGTATAGACGCAGACA+TGG | + | chr8_4:1874088-1874107 | Msa1306910:three_prime_UTR | 40.0% | |
| CAAGTTTCTGATTGGGAATC+TGG | + | chr8_4:1874181-1874200 | Msa1306910:three_prime_UTR | 40.0% | |
| TTGTTCATCATTGTAGCCAC+TGG | + | chr8_4:1874244-1874263 | Msa1306910:three_prime_UTR | 40.0% | |
| ACGGGGTTAACACAAATATC+AGG | - | chr8_4:1874301-1874320 | None:intergenic | 40.0% | |
| AATAAGTTCCGGTGACTCTG+AGG | - | chr8_4:1867031-1867050 | None:intergenic | 45.0% | |
| AGCGATAGAGGGGAATAGTT+GGG | - | chr8_4:1867078-1867097 | None:intergenic | 45.0% | |
| ! | GTTGCTTGTTGCAGTTCTCA+AGG | + | chr8_4:1867506-1867525 | Msa1306910:intron | 45.0% |
| ! | TGCTTGTTGCAGTTCTCAAG+GGG | + | chr8_4:1867508-1867527 | Msa1306910:intron | 45.0% |
| GTTCTCAAGGGGATTTCTGA+TGG | + | chr8_4:1867519-1867538 | Msa1306910:intron | 45.0% | |
| ! | ATTTCTGATGGTTTGTCGCG+AGG | + | chr8_4:1867531-1867550 | Msa1306910:intron | 45.0% |
| ! | TTTCTGATGGTTTGTCGCGA+GGG | + | chr8_4:1867532-1867551 | Msa1306910:intron | 45.0% |
| AGGGAAGAAACCGGATGAAA+TGG | + | chr8_4:1867551-1867570 | Msa1306910:intron | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | + | chr8_4:1867868-1867887 | Msa1306910:intron | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | + | chr8_4:1867869-1867888 | Msa1306910:intron | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr8_4:1867902-1867921 | None:intergenic | 45.0% |
| CGTACAATACACCAAGTGGT+GGG | + | chr8_4:1867938-1867957 | Msa1306910:intron | 45.0% | |
| GATCCCAGTGTTGTCAATCA+AGG | + | chr8_4:1868062-1868081 | Msa1306910:intron | 45.0% | |
| AGCGTATCGTGGAACAATAG+CGG | + | chr8_4:1868168-1868187 | Msa1306910:intron | 45.0% | |
| CACTATAGCGTAGCAGAGTT+TGG | - | chr8_4:1868199-1868218 | None:intergenic | 45.0% | |
| AACTCTGCTACGCTATAGTG+TGG | + | chr8_4:1868199-1868218 | Msa1306910:intron | 45.0% | |
| ATTGACCTGTATGACTAGGG+AGG | + | chr8_4:1868620-1868639 | Msa1306910:intron | 45.0% | |
| ATGATTTCCATGCACTGTGC+TGG | + | chr8_4:1869128-1869147 | Msa1306910:intron | 45.0% | |
| AAAAGGAAATGCGCCTTAGG+CGG | - | chr8_4:1869196-1869215 | None:intergenic | 45.0% | |
| GGAAAAAGGAAATGCGCCTT+AGG | - | chr8_4:1869199-1869218 | None:intergenic | 45.0% | |
| ! | GGCGCATTTCCTTTTTCCTT+TGG | + | chr8_4:1869201-1869220 | Msa1306910:intron | 45.0% |
| ! | AGCATGTAAATCAAGCACCG+AGG | + | chr8_4:1869232-1869251 | Msa1306910:intron | 45.0% |
| CATAAACACTGGGTAGAGAG+GGG | - | chr8_4:1869854-1869873 | None:intergenic | 45.0% | |
| GTCATAAACACTGGGTAGAG+AGG | - | chr8_4:1869856-1869875 | None:intergenic | 45.0% | |
| ACAAGCGAAACAACCTGTGA+AGG | - | chr8_4:1870083-1870102 | None:intergenic | 45.0% | |
| GTGTCTTTGACAACTGACTG+CGG | - | chr8_4:1870118-1870137 | None:intergenic | 45.0% | |
| AGACACTCGTCCTTACAAAC+AGG | + | chr8_4:1870132-1870151 | Msa1306910:CDS | 45.0% | |
| AACAGCGCAATCACACTTAC+AGG | - | chr8_4:1870298-1870317 | None:intergenic | 45.0% | |
| AGCCTTGAGCTCAAGTTATC+TGG | + | chr8_4:1870379-1870398 | Msa1306910:CDS | 45.0% | |
| GCCTTGAGCTCAAGTTATCT+GGG | + | chr8_4:1870380-1870399 | Msa1306910:CDS | 45.0% | |
| ACCCAGATAACTTGAGCTCA+AGG | - | chr8_4:1870384-1870403 | None:intergenic | 45.0% | |
| ! | TCTGGGTCCTGATTTTTCTC+AGG | + | chr8_4:1870397-1870416 | Msa1306910:CDS | 45.0% |
| CATGCGTCACCTGTTTGATA+AGG | + | chr8_4:1870587-1870606 | Msa1306910:CDS | 45.0% | |
| GGTGGCATAAATCAAGAGTC+AGG | - | chr8_4:1870756-1870775 | None:intergenic | 45.0% | |
| GTCCTCTTTCAGCTGCATAA+GGG | - | chr8_4:1870777-1870796 | None:intergenic | 45.0% | |
| ! | GACCATCATTTAAAGCACGG+TGG | + | chr8_4:1870794-1870813 | Msa1306910:CDS | 45.0% |
| TCAGACCAACCTTGAGAAAG+AGG | - | chr8_4:1870835-1870854 | None:intergenic | 45.0% | |
| TGAGAACACTGAAGACAGAC+GGG | - | chr8_4:1871015-1871034 | None:intergenic | 45.0% | |
| ! | GAGAGCCGAGTTCTCTAAAA+AGG | + | chr8_4:1871102-1871121 | Msa1306910:CDS | 45.0% |
| !! | GATCTGGTTGTAGGTTGGTT+TGG | + | chr8_4:1871412-1871431 | Msa1306910:intron | 45.0% |
| ATTTCATCAACTCCTGGTGC+TGG | + | chr8_4:1871734-1871753 | Msa1306910:CDS | 45.0% | |
| CTGACCTGAAATGTCGATAG+GGG | - | chr8_4:1871775-1871794 | None:intergenic | 45.0% | |
| GACTGACCTGAAATGTCGAT+AGG | - | chr8_4:1871777-1871796 | None:intergenic | 45.0% | |
| ! | TCGACATTTCAGGTCAGTCT+TGG | + | chr8_4:1871778-1871797 | Msa1306910:intron | 45.0% |
| !! | TTTGGCTTGTGGTGTCATAG+TGG | + | chr8_4:1871901-1871920 | Msa1306910:intron | 45.0% |
| !! | TTGGCTTGTGGTGTCATAGT+GGG | + | chr8_4:1871902-1871921 | Msa1306910:intron | 45.0% |
| TGGGGAAATGGTGTAGTAGT+GGG | - | chr8_4:1872336-1872355 | None:intergenic | 45.0% | |
| ATGGGGAAATGGTGTAGTAG+TGG | - | chr8_4:1872337-1872356 | None:intergenic | 45.0% | |
| ACTACACCATTTCCCCATAG+TGG | + | chr8_4:1872339-1872358 | Msa1306910:intron | 45.0% | |
| CTACACCATTTCCCCATAGT+GGG | + | chr8_4:1872340-1872359 | Msa1306910:intron | 45.0% | |
| AATGACCCACTATGGGGAAA+TGG | - | chr8_4:1872348-1872367 | None:intergenic | 45.0% | |
| TACAAACACCCACATGCAGT+GGG | + | chr8_4:1872769-1872788 | Msa1306910:intron | 45.0% | |
| ATGTGCTCTATGCTTACCTG+TGG | + | chr8_4:1873321-1873340 | Msa1306910:intron | 45.0% | |
| TAAATCGCAATACAGGCCAC+AGG | - | chr8_4:1873340-1873359 | None:intergenic | 45.0% | |
| CGATGTGGGATTTACGTCAT+AGG | - | chr8_4:1873499-1873518 | None:intergenic | 45.0% | |
| ! | GAGTTTGAAGGGCATAACAG+AGG | - | chr8_4:1873632-1873651 | None:intergenic | 45.0% |
| ! | CCTTCTCCTTTTCAACCTTC+TGG | - | chr8_4:1873698-1873717 | None:intergenic | 45.0% |
| CCAGAAGGTTGAAAAGGAGA+AGG | + | chr8_4:1873695-1873714 | Msa1306910:intron | 45.0% | |
| GAAGGTTGAAAAGGAGAAGG+GGG | + | chr8_4:1873698-1873717 | Msa1306910:intron | 45.0% | |
| !! | ATAGCAAGAGAGTGTTGTGC+TGG | + | chr8_4:1873891-1873910 | Msa1306910:three_prime_UTR | 45.0% |
| TTCTGATTGGGAATCTGGCA+CGG | + | chr8_4:1874186-1874205 | Msa1306910:three_prime_UTR | 45.0% | |
| TCATATTACATGCAGGCCAG+TGG | - | chr8_4:1874263-1874282 | None:intergenic | 45.0% | |
| !!! | TTATTTGATAAATAATTTTT+TGG | + | chr8_4:1871883-1871902 | Msa1306910:intron | 5.0% |
| TTGTTCGACCTCAGAGTCAC+CGG | + | chr8_4:1867020-1867039 | Msa1306910:CDS | 50.0% | |
| GGGAATAGTTGGGGCAGAAA+CGG | - | chr8_4:1867068-1867087 | None:intergenic | 50.0% | |
| GCGATAGAGGGGAATAGTTG+GGG | - | chr8_4:1867077-1867096 | None:intergenic | 50.0% | |
| GAGCGATAGAGGGGAATAGT+TGG | - | chr8_4:1867079-1867098 | None:intergenic | 50.0% | |
| TCGAGTCGAACTTCGAGTGA+CGG | - | chr8_4:1867106-1867125 | None:intergenic | 50.0% | |
| GAACGCGATTAGTACCTCTG+AGG | - | chr8_4:1867156-1867175 | None:intergenic | 50.0% | |
| TTTGTCGCGAGGGAAGAAAC+CGG | + | chr8_4:1867542-1867561 | Msa1306910:intron | 50.0% | |
| ACCTCATTTGCCACAGGTCA+AGG | + | chr8_4:1867667-1867686 | Msa1306910:intron | 50.0% | |
| TCCTTGACCTGTGGCAAATG+AGG | - | chr8_4:1867671-1867690 | None:intergenic | 50.0% | |
| TTCCATAGGTCCTTGACCTG+TGG | - | chr8_4:1867680-1867699 | None:intergenic | 50.0% | |
| TTCTATGCGAGGGGTAACCT+TGG | + | chr8_4:1867826-1867845 | Msa1306910:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr8_4:1867846-1867865 | None:intergenic | 50.0% | |
| GCTGCGTACAATACACCAAG+TGG | + | chr8_4:1867934-1867953 | Msa1306910:intron | 50.0% | |
| GCGTACAATACACCAAGTGG+TGG | + | chr8_4:1867937-1867956 | Msa1306910:intron | 50.0% | |
| CAAGTCCTCCCTAGTCATAC+AGG | - | chr8_4:1868628-1868647 | None:intergenic | 50.0% | |
| GTATGACTAGGGAGGACTTG+AGG | + | chr8_4:1868628-1868647 | Msa1306910:intron | 50.0% | |
| CTAGGGAGGACTTGAGGAAA+TGG | + | chr8_4:1868634-1868653 | Msa1306910:intron | 50.0% | |
| GGACAAGTTGCACGTTCCAT+GGG | + | chr8_4:1869013-1869032 | Msa1306910:CDS | 50.0% | |
| TTCACCCACAGGTAGGAAGA+CGG | + | chr8_4:1869042-1869061 | Msa1306910:intron | 50.0% | |
| AACACCGTCTTCCTACCTGT+GGG | - | chr8_4:1869049-1869068 | None:intergenic | 50.0% | |
| AAACACCGTCTTCCTACCTG+TGG | - | chr8_4:1869050-1869069 | None:intergenic | 50.0% | |
| ATTTCCATGCACTGTGCTGG+AGG | + | chr8_4:1869131-1869150 | Msa1306910:intron | 50.0% | |
| CACTGTGCTGGAGGTTGAAT+GGG | + | chr8_4:1869140-1869159 | Msa1306910:intron | 50.0% | |
| GCACAGAGGAAATGAGCTCT+TGG | - | chr8_4:1870568-1870587 | None:intergenic | 50.0% | |
| CTCTTTCAGCTGCATAAGGG+TGG | - | chr8_4:1870774-1870793 | None:intergenic | 50.0% | |
| CACCCTTATGCAGCTGAAAG+AGG | + | chr8_4:1870772-1870791 | Msa1306910:intron | 50.0% | |
| GGTCCTCTTTCAGCTGCATA+AGG | - | chr8_4:1870778-1870797 | None:intergenic | 50.0% | |
| GCAACTAGGCCTCTTTCTCA+AGG | + | chr8_4:1870823-1870842 | Msa1306910:CDS | 50.0% | |
| CTAGGCCTCTTTCTCAAGGT+TGG | + | chr8_4:1870827-1870846 | Msa1306910:intron | 50.0% | |
| AGAACACTGAAGACAGACGG+GGG | - | chr8_4:1871013-1871032 | None:intergenic | 50.0% | |
| GAGAACACTGAAGACAGACG+GGG | - | chr8_4:1871014-1871033 | None:intergenic | 50.0% | |
| CTCTGTAATGAGCAGGGTGT+TGG | + | chr8_4:1871049-1871068 | Msa1306910:intron | 50.0% | |
| TCGCAAAACACCCCTGCAAA+AGG | - | chr8_4:1871574-1871593 | None:intergenic | 50.0% | |
| CATGCGGCATAGCAACACAT+TGG | - | chr8_4:1871646-1871665 | None:intergenic | 50.0% | |
| GTTGCCCCTATCGACATTTC+AGG | + | chr8_4:1871768-1871787 | Msa1306910:CDS | 50.0% | |
| !! | TGGCTTGTGGTGTCATAGTG+GGG | + | chr8_4:1871903-1871922 | Msa1306910:intron | 50.0% |
| ! | TGTAGTAGTGGGGTTAGACC+GGG | - | chr8_4:1872325-1872344 | None:intergenic | 50.0% |
| ! | GTGTAGTAGTGGGGTTAGAC+CGG | - | chr8_4:1872326-1872345 | None:intergenic | 50.0% |
| GGGGAAATGGTGTAGTAGTG+GGG | - | chr8_4:1872335-1872354 | None:intergenic | 50.0% | |
| CTACAAACACCCACATGCAG+TGG | + | chr8_4:1872768-1872787 | Msa1306910:intron | 50.0% | |
| ACAAACACCCACATGCAGTG+GGG | + | chr8_4:1872770-1872789 | Msa1306910:intron | 50.0% | |
| AAGAGCTGCTCTCAGCAGAA+TGG | + | chr8_4:1872896-1872915 | Msa1306910:CDS | 50.0% | |
| AGAGCTGCTCTCAGCAGAAT+GGG | + | chr8_4:1872897-1872916 | Msa1306910:CDS | 50.0% | |
| TCGAGCCATGGAAGATGTCA+TGG | + | chr8_4:1872929-1872948 | Msa1306910:CDS | 50.0% | |
| ATGGCGTGCAATGTGATGCA+GGG | + | chr8_4:1873095-1873114 | Msa1306910:CDS | 50.0% | |
| TCGTGGTCTCTGGATGATGT+TGG | + | chr8_4:1873596-1873615 | Msa1306910:intron | 50.0% | |
| TGACGGAGCAGAGCGATAGA+GGG | - | chr8_4:1867089-1867108 | None:intergenic | 55.0% | |
| !! | AGTACCTCTGAGGCGATCGA+TGG | - | chr8_4:1867146-1867165 | None:intergenic | 55.0% |
| CTTCTGATCCAATGCGTGCC+AGG | + | chr8_4:1867354-1867373 | Msa1306910:intron | 55.0% | |
| GTCAAACACCTGGCACGCAT+TGG | - | chr8_4:1867365-1867384 | None:intergenic | 55.0% | |
| TGCCACAGGTCAAGGACCTA+TGG | + | chr8_4:1867675-1867694 | Msa1306910:intron | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr8_4:1867881-1867900 | Msa1306910:intron | 55.0% | |
| ! | TTTTGCCTGTGAGCGCACAG+AGG | + | chr8_4:1868782-1868801 | Msa1306910:intron | 55.0% |
| TTTGCCTGTGAGCGCACAGA+GGG | + | chr8_4:1868783-1868802 | Msa1306910:intron | 55.0% | |
| GGGACAAGTTGCACGTTCCA+TGG | + | chr8_4:1869012-1869031 | Msa1306910:CDS | 55.0% | |
| GTCTTCCTACCTGTGGGTGA+AGG | - | chr8_4:1869043-1869062 | None:intergenic | 55.0% | |
| TCAACCTCCAGCACAGTGCA+TGG | - | chr8_4:1869138-1869157 | None:intergenic | 55.0% | |
| GCACTGTGCTGGAGGTTGAA+TGG | + | chr8_4:1869139-1869158 | Msa1306910:intron | 55.0% | |
| GTGCTGGAGGTTGAATGGGT+AGG | + | chr8_4:1869144-1869163 | Msa1306910:intron | 55.0% | |
| TGACGCCGAGCTACAAGTTC+TGG | - | chr8_4:1869929-1869948 | None:intergenic | 55.0% | |
| CAACTGACTGCGGAATAGCG+TGG | - | chr8_4:1870108-1870127 | None:intergenic | 55.0% | |
| GCATACTCTCTTGGCTGCAG+AGG | - | chr8_4:1870513-1870532 | None:intergenic | 55.0% | |
| AACAGGTGACGCATGCACAG+AGG | - | chr8_4:1870582-1870601 | None:intergenic | 55.0% | |
| CACGGTGGAAGGATGCAACT+AGG | + | chr8_4:1870809-1870828 | Msa1306910:CDS | 55.0% | |
| CCATGATGATCTCCAGCACC+AGG | - | chr8_4:1871749-1871768 | None:intergenic | 55.0% | |
| ! | CCTGGTGCTGGAGATCATCA+TGG | + | chr8_4:1871746-1871765 | Msa1306910:CDS | 55.0% |
| AAGTAGGCCCCACTGCATGT+GGG | - | chr8_4:1872780-1872799 | None:intergenic | 55.0% | |
| GAGCTGCTCTCAGCAGAATG+GGG | + | chr8_4:1872898-1872917 | Msa1306910:CDS | 55.0% | |
| AGCTGCTCTCAGCAGAATGG+GGG | + | chr8_4:1872899-1872918 | Msa1306910:CDS | 55.0% | |
| CATGGCGTGCAATGTGATGC+AGG | + | chr8_4:1873094-1873113 | Msa1306910:CDS | 55.0% | |
| GGTTGAAAAGGAGAAGGGGG+TGG | + | chr8_4:1873701-1873720 | Msa1306910:intron | 55.0% | |
| !! | GCAAGAGAGTGTTGTGCTGG+TGG | + | chr8_4:1873894-1873913 | Msa1306910:three_prime_UTR | 55.0% |
| ! | TTGTGCTGGTGGCCATTCAC+AGG | + | chr8_4:1873905-1873924 | Msa1306910:three_prime_UTR | 55.0% |
| TGATTGGGAATCTGGCACGG+TGG | + | chr8_4:1874189-1874208 | Msa1306910:three_prime_UTR | 55.0% | |
| GGCAGAAACGGCGTCGTTTG+AGG | - | chr8_4:1867056-1867075 | None:intergenic | 60.0% | |
| GACGGAGCAGAGCGATAGAG+GGG | - | chr8_4:1867088-1867107 | None:intergenic | 60.0% | |
| ! | GTGACGGAGCAGAGCGATAG+AGG | - | chr8_4:1867090-1867109 | None:intergenic | 60.0% |
| ! | TCTGAGGCGATCGATGGCGT+AGG | - | chr8_4:1867140-1867159 | None:intergenic | 60.0% |
| TACGCCATCGATCGCCTCAG+AGG | + | chr8_4:1867139-1867158 | Msa1306910:intron | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr8_4:1867835-1867854 | Msa1306910:intron | 60.0% | |
| CTGAAGCTCCCGCATACGCA+GGG | - | chr8_4:1867977-1867996 | None:intergenic | 60.0% | |
| ACTGAAGCTCCCGCATACGC+AGG | - | chr8_4:1867978-1867997 | None:intergenic | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | + | chr8_4:1867982-1868001 | Msa1306910:intron | 60.0% | |
| TGTGGGTGAAGGCTGACCCA+TGG | - | chr8_4:1869032-1869051 | None:intergenic | 60.0% | |
| ATGGGTCAGCCTTCACCCAC+AGG | + | chr8_4:1869031-1869050 | Msa1306910:CDS | 60.0% | |
| GTCAGCCTTCACCCACAGGT+AGG | + | chr8_4:1869035-1869054 | Msa1306910:intron | 60.0% | |
| CCTTAGGCGGCAGCAACAAC+TGG | - | chr8_4:1869183-1869202 | None:intergenic | 60.0% | |
| CCAGTTGTTGCTGCCGCCTA+AGG | + | chr8_4:1869180-1869199 | Msa1306910:intron | 60.0% | |
| CAAGTAGGCCCCACTGCATG+TGG | - | chr8_4:1872781-1872800 | None:intergenic | 60.0% | |
| ! | CAAGTGGTGGGACCCCTTCC+CGG | + | chr8_4:1867950-1867969 | Msa1306910:intron | 65.0% |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr8_4:1867965-1867984 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | chr8_4:1867966-1867985 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | + | chr8_4:1867965-1867984 | Msa1306910:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | chr8_4:1867966-1867985 | Msa1306910:intron | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | + | chr8_4:1867983-1868002 | Msa1306910:intron | 65.0% | |
| ATCGCCCTCTGTGCGCTCAC+AGG | - | chr8_4:1868790-1868809 | None:intergenic | 65.0% | |
| GAGCGCACAGAGGGCGATCA+TGG | + | chr8_4:1868792-1868811 | Msa1306910:intron | 65.0% | |
| GGGGGTGAACAGTCGAGCCA+TGG | + | chr8_4:1872917-1872936 | Msa1306910:CDS | 65.0% | |
| CGGGAAGGGGTCCCACCACT+TGG | - | chr8_4:1867952-1867971 | None:intergenic | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | - | chr8_4:1867967-1867986 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | chr8_4:1867971-1867990 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | chr8_4:1867972-1867991 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 1867013 | 1874465 | 1867013 | ID=Msa1306910;Name=Msa1306910 |
| chr8_4 | mRNA | 1867013 | 1874465 | 1867013 | ID=Msa1306910-mRNA-1;Parent=Msa1306910;Name=Msa1306910-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.88|0.89|1|0.83|0.89|19|448|416 |
| chr8_4 | exon | 1867013 | 1867114 | 1867013 | ID=Msa1306910-mRNA-1:exon:580;Parent=Msa1306910-mRNA-1 |
| chr8_4 | exon | 1867683 | 1867774 | 1867683 | ID=Msa1306910-mRNA-1:exon:581;Parent=Msa1306910-mRNA-1 |
| chr8_4 | exon | 1868638 | 1868719 | 1868638 | ID=Msa1306910-mRNA-1:exon:582;Parent=Msa1306910-mRNA-1 |
| chr8_4 | exon | 1868802 | 1868861 | 1868802 | ID=Msa1306910-mRNA-1:exon:583;Parent=Msa1306910-mRNA-1 |
| chr8_4 | exon | 1868995 | 1869052 | 1868995 | ID=Msa1306910-mRNA-1:exon:584;Parent=Msa1306910-mRNA-1 |
| chr8_4 | exon | 1869465 | 1869484 | 1869465 | ID=Msa1306910-mRNA-1:exon:585;Parent=Msa1306910-mRNA-1 |
| chr8_4 | exon | 1869908 | 1869991 | 1869908 | ID=Msa1306910-mRNA-1:exon:586;Parent=Msa1306910-mRNA-1 |
| chr8_4 | exon | 1870089 | 1870153 | 1870089 | ID=Msa1306910-mRNA-1:exon:587;Parent=Msa1306910-mRNA-1 |
| chr8_4 | exon | 1870249 | 1870297 | 1870249 | ID=Msa1306910-mRNA-1:exon:588;Parent=Msa1306910-mRNA-1 |
| chr8_4 | exon | 1870371 | 1870418 | 1870371 | ID=Msa1306910-mRNA-1:exon:589;Parent=Msa1306910-mRNA-1 |
| chr8_4 | exon | 1870519 | 1870608 | 1870519 | ID=Msa1306910-mRNA-1:exon:590;Parent=Msa1306910-mRNA-1 |
| chr8_4 | exon | 1870785 | 1870844 | 1870785 | ID=Msa1306910-mRNA-1:exon:591;Parent=Msa1306910-mRNA-1 |
| chr8_4 | exon | 1871064 | 1871123 | 1871064 | ID=Msa1306910-mRNA-1:exon:592;Parent=Msa1306910-mRNA-1 |
| chr8_4 | exon | 1871425 | 1871499 | 1871425 | ID=Msa1306910-mRNA-1:exon:593;Parent=Msa1306910-mRNA-1 |
| chr8_4 | exon | 1871704 | 1871789 | 1871704 | ID=Msa1306910-mRNA-1:exon:594;Parent=Msa1306910-mRNA-1 |
| chr8_4 | exon | 1872884 | 1872977 | 1872884 | ID=Msa1306910-mRNA-1:exon:595;Parent=Msa1306910-mRNA-1 |
| chr8_4 | exon | 1873064 | 1873171 | 1873064 | ID=Msa1306910-mRNA-1:exon:596;Parent=Msa1306910-mRNA-1 |
| chr8_4 | exon | 1873862 | 1873926 | 1873862 | ID=Msa1306910-mRNA-1:exon:597;Parent=Msa1306910-mRNA-1 |
| chr8_4 | exon | 1874065 | 1874465 | 1874065 | ID=Msa1306910-mRNA-1:exon:598;Parent=Msa1306910-mRNA-1 |
| chr8_4 | CDS | 1867013 | 1867114 | 1867013 | ID=Msa1306910-mRNA-1:cds;Parent=Msa1306910-mRNA-1 |
| chr8_4 | CDS | 1867683 | 1867774 | 1867683 | ID=Msa1306910-mRNA-1:cds;Parent=Msa1306910-mRNA-1 |
| chr8_4 | CDS | 1868638 | 1868719 | 1868638 | ID=Msa1306910-mRNA-1:cds;Parent=Msa1306910-mRNA-1 |
| chr8_4 | CDS | 1868802 | 1868861 | 1868802 | ID=Msa1306910-mRNA-1:cds;Parent=Msa1306910-mRNA-1 |
| chr8_4 | CDS | 1868995 | 1869052 | 1868995 | ID=Msa1306910-mRNA-1:cds;Parent=Msa1306910-mRNA-1 |
| chr8_4 | CDS | 1869465 | 1869484 | 1869465 | ID=Msa1306910-mRNA-1:cds;Parent=Msa1306910-mRNA-1 |
| chr8_4 | CDS | 1869908 | 1869991 | 1869908 | ID=Msa1306910-mRNA-1:cds;Parent=Msa1306910-mRNA-1 |
| chr8_4 | CDS | 1870089 | 1870153 | 1870089 | ID=Msa1306910-mRNA-1:cds;Parent=Msa1306910-mRNA-1 |
| chr8_4 | CDS | 1870249 | 1870297 | 1870249 | ID=Msa1306910-mRNA-1:cds;Parent=Msa1306910-mRNA-1 |
| chr8_4 | CDS | 1870371 | 1870418 | 1870371 | ID=Msa1306910-mRNA-1:cds;Parent=Msa1306910-mRNA-1 |
| chr8_4 | CDS | 1870519 | 1870608 | 1870519 | ID=Msa1306910-mRNA-1:cds;Parent=Msa1306910-mRNA-1 |
| chr8_4 | CDS | 1870785 | 1870844 | 1870785 | ID=Msa1306910-mRNA-1:cds;Parent=Msa1306910-mRNA-1 |
| chr8_4 | CDS | 1871064 | 1871123 | 1871064 | ID=Msa1306910-mRNA-1:cds;Parent=Msa1306910-mRNA-1 |
| chr8_4 | CDS | 1871425 | 1871499 | 1871425 | ID=Msa1306910-mRNA-1:cds;Parent=Msa1306910-mRNA-1 |
| chr8_4 | CDS | 1871704 | 1871789 | 1871704 | ID=Msa1306910-mRNA-1:cds;Parent=Msa1306910-mRNA-1 |
| chr8_4 | CDS | 1872884 | 1872977 | 1872884 | ID=Msa1306910-mRNA-1:cds;Parent=Msa1306910-mRNA-1 |
| chr8_4 | CDS | 1873064 | 1873171 | 1873064 | ID=Msa1306910-mRNA-1:cds;Parent=Msa1306910-mRNA-1 |
| chr8_4 | CDS | 1873862 | 1873879 | 1873862 | ID=Msa1306910-mRNA-1:cds;Parent=Msa1306910-mRNA-1 |
| chr8_4 | three_prime_UTR | 1873880 | 1873926 | 1873880 | ID=Msa1306910-mRNA-1:three_prime_utr;Parent=Msa1306910-mRNA-1 |
| chr8_4 | three_prime_UTR | 1874065 | 1874465 | 1874065 | ID=Msa1306910-mRNA-1:three_prime_utr;Parent=Msa1306910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
