AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1226520


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1226520 MtrunA17_Chr8g0381871 99.401 835 5 0 1 835 1 835 0.0 1717
Msa1226520 MtrunA17_Chr2g0296441 76.060 802 141 7 1 789 1 764 0.0 1234
Msa1226520 MtrunA17_Chr4g0035581 36.177 586 324 10 77 653 197 741 1.11e-115 371
Msa1226520 MtrunA17_Chr7g0269941 37.963 540 283 9 119 652 145 638 1.07e-113 362
Msa1226520 MtrunA17_Chr4g0065401 33.234 671 369 13 20 662 39 658 3.97e-103 335
Msa1226520 MtrunA17_Chr4g0052131 31.034 754 399 17 20 713 15 707 5.22e-100 328
Msa1226520 MtrunA17_Chr4g0068511 33.080 659 369 12 20 657 220 827 3.47e-98 327
Msa1226520 MtrunA17_Chr7g0263661 30.921 608 329 14 106 653 129 705 5.94e-88 296
Msa1226520 MtrunA17_Chr2g0279361 34.358 553 298 16 113 653 116 615 1.54e-79 270
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1226520 AT5G44635.1 73.477 837 214 4 1 835 1 831 0.0 1285
Msa1226520 AT5G44635.2 71.379 863 213 5 1 835 1 857 0.0 1273
Msa1226520 AT2G16440.1 34.962 655 370 13 16 653 133 748 2.48e-116 374
Msa1226520 AT4G02060.2 38.235 544 284 9 119 656 143 640 2.42e-115 367
Msa1226520 AT4G02060.1 38.235 544 284 9 119 656 143 640 2.42e-115 367
Msa1226520 AT2G07690.1 33.284 670 376 11 16 662 31 652 1.43e-101 331
Msa1226520 AT2G07690.2 33.333 672 371 13 16 662 31 650 3.56e-100 327
Msa1226520 AT5G46280.3 32.107 707 358 16 10 662 5 643 4.32e-100 326
Msa1226520 AT1G44900.2 32.787 671 377 13 10 657 210 829 1.04e-99 331
Msa1226520 AT1G44900.1 32.787 671 377 13 10 657 212 831 1.46e-99 331
Msa1226520 AT5G46280.1 32.107 707 358 16 10 662 5 643 4.36e-99 326
Msa1226520 AT5G46280.2 32.258 682 340 16 10 637 5 618 9.34e-97 315
Msa1226520 AT3G09660.2 31.833 600 328 15 106 653 131 701 1.61e-90 302
Msa1226520 AT3G09660.3 32.161 597 327 15 106 653 131 698 2.07e-90 303
Msa1226520 AT3G09660.1 31.833 600 328 15 106 653 131 701 4.19e-90 302
Msa1226520 AT5G46280.4 32.019 634 309 15 10 589 5 570 1.18e-88 292
Msa1226520 AT2G14050.1 30.076 655 377 22 20 653 22 616 2.86e-73 253
Msa1226520 AT2G14050.2 30.076 655 377 22 20 653 22 616 3.57e-73 252

Find 204 sgRNAs with CRISPR-Local

Find 369 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTATAATTGCTTTAATT+TGG 0.072017 8_2:+893575 None:intergenic
ATACAAAACTCTCCAGTTTC+TGG 0.160572 8_2:+895991 None:intergenic
ACAAGATTGATTAGTTAAAT+TGG 0.199581 8_2:+892985 None:intergenic
TGTGAGGGGCCTTAGGGCTT+TGG 0.214668 8_2:-896949 Msa1226520:CDS
CCACCAAGTTGCTGCAATAT+TGG 0.216905 8_2:+893277 None:intergenic
GGAAGCATTCGGTGGTTATT+TGG 0.231370 8_2:-898381 Msa1226520:CDS
CTCTATAATTGCTTTAATTT+GGG 0.252599 8_2:+893576 None:intergenic
GAAACCTAACTTCCAAAGTT+TGG 0.267938 8_2:+898433 None:intergenic
CAACGCAAGGGTGCTTCATC+TGG 0.270964 8_2:-896981 Msa1226520:CDS
GTGAGGGGCCTTAGGGCTTT+GGG 0.275142 8_2:-896948 Msa1226520:CDS
AGCAACGGGATTTGATTAAA+TGG 0.286323 8_2:-893663 Msa1226520:CDS
TATTAATCAACAACATAATT+AGG 0.298193 8_2:+893346 None:intergenic
TTTCCCAAACTTTGGAAGTT+AGG 0.303274 8_2:-898437 Msa1226520:five_prime_UTR
CTCTCCAGTTTCTGGTTCCT+TGG 0.319235 8_2:+895999 None:intergenic
TTCAACCGATTCAGCGAAAA+TGG 0.322211 8_2:-898402 Msa1226520:exon
TGCTGCAAACTTCTATAATA+AGG 0.322371 8_2:-894392 Msa1226520:intron
ATATTATTGTCTTCATTTAC+AGG 0.324293 8_2:-893129 Msa1226520:three_prime_UTR
GCAACGTTGATATCCTTGTT+AGG 0.332960 8_2:+897862 None:intergenic
ATGAAGGTGTGAGGGGCCTT+AGG 0.335308 8_2:-896956 Msa1226520:CDS
CATGAAGGCATCAGCCTTAG+AGG 0.337585 8_2:-896241 Msa1226520:CDS
GACATAAACGTTTGTATTGT+TGG 0.339761 8_2:-896217 Msa1226520:CDS
CTCCATAACAAACCTCTTGC+AGG 0.345294 8_2:+897915 None:intergenic
GTTAAAACCTTCTTGCATTA+CGG 0.350902 8_2:+893947 None:intergenic
AAACCTAACTTCCAAAGTTT+GGG 0.354634 8_2:+898434 None:intergenic
AATTGTCATACCTGATATAT+TGG 0.355144 8_2:-897051 Msa1226520:CDS
GACAATTGGAATGTTATAGA+AGG 0.359993 8_2:+897840 None:intergenic
TGGTAATCTGTAACATCGTC+TGG 0.365977 8_2:+894898 None:intergenic
TGAATATACCTCTTGACAAT+TGG 0.372562 8_2:+897826 None:intergenic
AATCAGTAAATTTGCTCTCT+TGG 0.374951 8_2:+897322 None:intergenic
TGGCTCTCTGCCTAGGTCAT+TGG 0.375729 8_2:-897256 Msa1226520:CDS
TCTTGGTAATGCTGGAAAAC+TGG 0.376020 8_2:-893227 Msa1226520:three_prime_UTR
GGTAGGCTTGTATCTGTAAC+AGG 0.380034 8_2:-897632 Msa1226520:CDS
GGCAGTTGGAAGCTTTAATC+AGG 0.381387 8_2:-894576 Msa1226520:CDS
CTTGCCGCTGCCAACCCTGC+TGG 0.383099 8_2:-895106 Msa1226520:CDS
CACCAAGTTGCTGCAATATT+GGG 0.384610 8_2:+893278 None:intergenic
CCAGATGTATACACAGATCT+TGG 0.385985 8_2:+896060 None:intergenic
ACAAGCTTGGTGAAGAAATC+TGG 0.391646 8_2:+896352 None:intergenic
AGAAACCATTTCCCAAACTT+TGG 0.399013 8_2:-898445 Msa1226520:five_prime_UTR
ATTGCAGGAAGTGGCTTAGC+TGG 0.400192 8_2:-893691 Msa1226520:intron
AAACGTTTATGTCCCCTCTA+AGG 0.400315 8_2:+896227 None:intergenic
CAAGCAGCATCAGAAGCTGC+TGG 0.400775 8_2:-893421 Msa1226520:CDS
GTTGCCAAGGAACCAGAAAC+TGG 0.401643 8_2:-896003 Msa1226520:CDS
TTCCACCGGCTATACTTTCA+AGG 0.402725 8_2:-894951 Msa1226520:CDS
GGCCATTGCAAGGTGTCATC+TGG 0.403603 8_2:-894545 Msa1226520:CDS
TGCCTGCAAGAGGTTTGTTA+TGG 0.403641 8_2:-897917 Msa1226520:CDS
CTGTTGTTACATGTAGCATT+TGG 0.405390 8_2:+897366 None:intergenic
GATTTAACAGGCTCAGGAAC+TGG 0.406162 8_2:-896401 Msa1226520:intron
CCAAGATCTGTGTATACATC+TGG 0.406994 8_2:-896060 Msa1226520:CDS
CTAGTAGTGATGAAAGAGTT+TGG 0.407626 8_2:-893321 Msa1226520:three_prime_UTR
CCAAATTAAAGCAATTATAG+AGG 0.410633 8_2:-893575 Msa1226520:intron
CAAACTCTTTCATCACTACT+AGG 0.412297 8_2:+893322 None:intergenic
AACTTCCAAAGTTTGGGAAA+TGG 0.413854 8_2:+898440 None:intergenic
AAGAGAGCAAATTTACTGAT+TGG 0.413990 8_2:-897320 Msa1226520:CDS
TTGCAGGCATTCTGCAAGTA+AGG 0.418482 8_2:+897931 None:intergenic
GAAGCCAACGCCAATATATC+AGG 0.418612 8_2:+897041 None:intergenic
CTAGACACTTGAAAGTTCCT+TGG 0.427198 8_2:+897570 None:intergenic
CGACATTCTGATCTCTCTCC+AGG 0.428347 8_2:+897017 None:intergenic
GGAAAGTCATCATCTGCTGC+TGG 0.432241 8_2:-896039 Msa1226520:CDS
CAACGTTGATATCCTTGTTA+GGG 0.439564 8_2:+897863 None:intergenic
AAGGTGTCATCTGGATAATC+AGG 0.447002 8_2:-894536 Msa1226520:intron
AAGACGCATGACAAGGGCCT+TGG 0.449057 8_2:+893986 None:intergenic
TGAAGGTGTGAGGGGCCTTA+GGG 0.453292 8_2:-896955 Msa1226520:CDS
AAAATCAATGAACATGGTGT+TGG 0.455706 8_2:+898123 None:intergenic
TTGCATATCGGATGACAGTT+AGG 0.457504 8_2:-894597 Msa1226520:CDS
TGGATCACCAGTTTCAGATC+TGG 0.457654 8_2:-898202 Msa1226520:intron
ATATTGGCGTTGGCTTCCCC+TGG 0.469082 8_2:-897035 Msa1226520:CDS
AGCTACACTTTCAACAAGCT+TGG 0.470042 8_2:+896339 None:intergenic
GTAGCATTTGGACAAATTGT+TGG 0.476872 8_2:+897378 None:intergenic
AAAGTTCCTTGGAGAAGCTC+AGG 0.479407 8_2:+897581 None:intergenic
TTATCATACCGTCCTCCAGC+AGG 0.479460 8_2:+895091 None:intergenic
CGTAGAGCTGATACAAATCC+TGG 0.483403 8_2:-894628 Msa1226520:CDS
TGAGTTTCAAGATCAAGATA+TGG 0.484842 8_2:-894255 Msa1226520:CDS
GAACATGTTATTACCTTCAG+TGG 0.489503 8_2:+895061 None:intergenic
AGGGTTGGCAGCGGCAAGAA+TGG 0.489803 8_2:+895111 None:intergenic
AGCTGGAAACTCTACTGCTC+AGG 0.490744 8_2:-894180 Msa1226520:CDS
CTATCTCTGATGAATATTTG+AGG 0.491103 8_2:-898063 Msa1226520:intron
TCCTTCTTATGCTAATGAGT+GGG 0.491510 8_2:-896279 Msa1226520:CDS
CCAATATTGCAGCAACTTGG+TGG 0.493219 8_2:-893277 Msa1226520:three_prime_UTR
GGTTGATGAGAAAGCCGTTA+GGG 0.498327 8_2:-898360 Msa1226520:CDS
TGGCTACATCAGAGATTGGT+AGG 0.504042 8_2:-897649 Msa1226520:CDS
GTAGAAGAGAAATAGACATC+AGG 0.506918 8_2:-896778 Msa1226520:CDS
CAAGATGGACATAAGAGATC+AGG 0.507764 8_2:-895291 Msa1226520:intron
TGGTTGATGAGAAAGCCGTT+AGG 0.508472 8_2:-898361 Msa1226520:CDS
AACGATGCTGATGGTCAAGC+TGG 0.508931 8_2:-894197 Msa1226520:CDS
CTGATACAAATCCTGGCAGT+AGG 0.511503 8_2:-894621 Msa1226520:CDS
CTGGCAGTAGGGTTGCATAT+CGG 0.513097 8_2:-894609 Msa1226520:CDS
ATGAGATTGTAGAACATGCT+AGG 0.515340 8_2:-897218 Msa1226520:CDS
GTCAGCAAGCATCAAAGCGC+CGG 0.518628 8_2:+895343 None:intergenic
CCCCACTCATTAGCATAAGA+AGG 0.518823 8_2:+896278 None:intergenic
GTCCCAATATTGCAGCAACT+TGG 0.520031 8_2:-893280 Msa1226520:three_prime_UTR
CAAGATATGGACGAAGAAGC+AGG 0.521607 8_2:-894242 Msa1226520:CDS
GTCAGATGCAAGAAAACTAC+TGG 0.521796 8_2:-894671 Msa1226520:CDS
TCCTCCAGCAGGGTTGGCAG+CGG 0.522459 8_2:+895102 None:intergenic
ACTATTAGTATCACAAAAGC+AGG 0.523615 8_2:-895163 Msa1226520:CDS
CAAATTTACTGATTGGCAAA+GGG 0.525128 8_2:-897313 Msa1226520:CDS
TAATTACAGTTCCGTGGAGG+AGG 0.526353 8_2:-893614 Msa1226520:CDS
CTTAGCTGGGATGAAGCAAC+GGG 0.528915 8_2:-893677 Msa1226520:CDS
GCAAATTTACTGATTGGCAA+AGG 0.529371 8_2:-897314 Msa1226520:CDS
AGAGCCAGCAGGTATCTCAT+TGG 0.529743 8_2:+897272 None:intergenic
CATACCTGATATATTGGCGT+TGG 0.531733 8_2:-897045 Msa1226520:CDS
GAATTGGCTACATCAGAGAT+TGG 0.532287 8_2:-897653 Msa1226520:CDS
CATTGATGAATTTGACAAGA+TGG 0.532365 8_2:-895306 Msa1226520:CDS
GGTTGCAATTCATGAGGCTA+TGG 0.533064 8_2:-895194 Msa1226520:CDS
GGTGCTTCATCTGGGAATGA+AGG 0.533732 8_2:-896972 Msa1226520:CDS
ATCTGGGAATGAAGGTGTGA+GGG 0.535862 8_2:-896964 Msa1226520:CDS
TGCTAGAAATGATAGAACTT+TGG 0.535930 8_2:-893377 Msa1226520:CDS
GCTTTGATGCTTGCTGACAA+TGG 0.535963 8_2:-895338 Msa1226520:CDS
GAAAGTCATCATCTGCTGCT+GGG 0.536220 8_2:-896038 Msa1226520:CDS
CGATATGCAACCCTACTGCC+AGG 0.536524 8_2:+894610 None:intergenic
TTGGCAAAGGGTCAGAATGC+AGG 0.537253 8_2:-897301 Msa1226520:CDS
GCCGCTGCCAACCCTGCTGG+AGG 0.537734 8_2:-895103 Msa1226520:CDS
TACCTGCTGGCTCTCTGCCT+AGG 0.538550 8_2:-897263 Msa1226520:CDS
CAGGAAGCCGCTGGAACCAA+TGG 0.541233 8_2:-894161 Msa1226520:intron
CTCTGACTCCCAAAGCCCTA+AGG 0.541676 8_2:+896940 None:intergenic
GTACAATGTGGCTCTTCCAC+CGG 0.541952 8_2:-894965 Msa1226520:CDS
AACGCAAGGGTGCTTCATCT+GGG 0.544757 8_2:-896980 Msa1226520:CDS
TCAGCGAAAATGGAAGCATT+CGG 0.548151 8_2:-898392 Msa1226520:exon
AGACATCAGGAATAGAAAGA+AGG 0.549012 8_2:-896765 Msa1226520:CDS
TAGGGAAGCTTCTCAACGCA+AGG 0.550312 8_2:-896994 Msa1226520:CDS
ATGAAGGCATCAGCCTTAGA+GGG 0.551495 8_2:-896240 Msa1226520:CDS
CTGCCAACCCTGCTGGAGGA+CGG 0.553709 8_2:-895099 Msa1226520:CDS
TGGATGAAGTTCAAAGAATG+AGG 0.554379 8_2:-896381 Msa1226520:CDS
ACTGAAAAGTTTGATGATGT+TGG 0.559671 8_2:-893182 Msa1226520:three_prime_UTR
AGTTCTGCTGTAGTGAACGT+TGG 0.559838 8_2:+894823 None:intergenic
TTCAACTTTCGCCTCCTCCA+CGG 0.560026 8_2:+893603 None:intergenic
TGATCGTGATAGATGATGGC+AGG 0.560237 8_2:-893444 Msa1226520:CDS
GAGAGAGATCAGAATGTCGT+AGG 0.562049 8_2:-897013 Msa1226520:CDS
TTGCAGGAAGTGGCTTAGCT+GGG 0.562532 8_2:-893690 Msa1226520:intron
TCGGATGACAGTTAGGCAGT+TGG 0.563427 8_2:-894590 Msa1226520:CDS
CAGGATTTGTATCAGCTCTA+CGG 0.565166 8_2:+894629 None:intergenic
AAGTGAAAATGATTAACTAC+AGG 0.565779 8_2:+893037 None:intergenic
AATTGAGACTTTGCACAGCT+AGG 0.566095 8_2:+896190 None:intergenic
TTCTTTGTTTCAGTACAATG+TGG 0.566629 8_2:-894977 Msa1226520:intron
CATTTGATCGTGATAGATGA+TGG 0.566869 8_2:-893448 Msa1226520:CDS
ACTTGCAGAATGCCTGCAAG+AGG 0.569621 8_2:-897927 Msa1226520:CDS
CTGTAACAGGAGTGGTAACA+AGG 0.572546 8_2:-897619 Msa1226520:CDS
TCAAACCTTGAAAGTATAGC+CGG 0.573082 8_2:+894946 None:intergenic
GACCTAGGCAGAGAGCCAGC+AGG 0.575423 8_2:+897261 None:intergenic
GGAAGCTTTAATCAGGCTGT+CGG 0.576059 8_2:-894569 Msa1226520:CDS
TAACTGATGAATACTTTCAA+AGG 0.576649 8_2:-894013 Msa1226520:CDS
GCTTAGCTGGGATGAAGCAA+CGG 0.577228 8_2:-893678 Msa1226520:CDS
ATACCGTCCTCCAGCAGGGT+TGG 0.577304 8_2:+895096 None:intergenic
TATTATTGTCTTCATTTACA+GGG 0.578919 8_2:-893128 Msa1226520:three_prime_UTR
GGTTTGTTCCAGATTTGTGA+TGG 0.579414 8_2:-896800 Msa1226520:intron
AGAGAGATCAGAATGTCGTA+GGG 0.583410 8_2:-897012 Msa1226520:CDS
GACATTCTGATCTCTCTCCA+GGG 0.583538 8_2:+897018 None:intergenic
TGATAAGTCTAAACCACTGA+AGG 0.585685 8_2:-895074 Msa1226520:intron
ATAACATTCCAATTGTCAAG+AGG 0.586980 8_2:-897834 Msa1226520:intron
ATTTAAGAGTTGAACGATGT+CGG 0.588280 8_2:-893098 Msa1226520:three_prime_UTR
CACCTCACCATTGGTTCCAG+CGG 0.588414 8_2:+894154 None:intergenic
TAAAAGCAAGTCGGTAGGAG+AGG 0.589366 8_2:+896916 None:intergenic
ACGTCCAATGAGATACCTGC+TGG 0.590348 8_2:-897276 Msa1226520:CDS
CCTTCTTATGCTAATGAGTG+GGG 0.592758 8_2:-896278 Msa1226520:CDS
ATGTAACAACAGAGCAAAGT+GGG 0.595789 8_2:-897355 Msa1226520:CDS
ATAACGAACCTGAACAGAGT+TGG 0.596640 8_2:+896890 None:intergenic
TCTACTGCTCAGGAAGCCGC+TGG 0.597751 8_2:-894170 Msa1226520:CDS
GGCTGTCGGAGGCCATTGCA+AGG 0.600168 8_2:-894555 Msa1226520:CDS
AAATGATAGAACTTTGGCTG+TGG 0.600445 8_2:-893371 Msa1226520:CDS
TGATACAAATCCTGGCAGTA+GGG 0.600996 8_2:-894620 Msa1226520:CDS
GTTCACAAATCTACTCATGA+AGG 0.603800 8_2:-896256 Msa1226520:CDS
TGAGATTGTAGAACATGCTA+GGG 0.603809 8_2:-897217 Msa1226520:CDS
GTTCGACCTGAGCTTCTCCA+AGG 0.607207 8_2:-897587 Msa1226520:CDS
CATCTGGGAATGAAGGTGTG+AGG 0.608451 8_2:-896965 Msa1226520:CDS
ATCCAGATGACACCTTGCAA+TGG 0.610507 8_2:+894543 None:intergenic
AAGCTTGCAGCTCAAGACAA+AGG 0.610528 8_2:+893251 None:intergenic
GCGAAAATGGAAGCATTCGG+TGG 0.613597 8_2:-898389 Msa1226520:exon
ATTGTAGAACATGCTAGGGC+TGG 0.615899 8_2:-897213 Msa1226520:CDS
GCTGTCTAAGACGCATGACA+AGG 0.617928 8_2:+893979 None:intergenic
AGCTTTAATCAGGCTGTCGG+AGG 0.618052 8_2:-894566 Msa1226520:CDS
ATCCTTCTTATGCTAATGAG+TGG 0.618694 8_2:-896280 Msa1226520:CDS
ATTGAAGGTTGCAATTCATG+AGG 0.621895 8_2:-895200 Msa1226520:intron
GTTGACTGCAACTGTTGCCA+AGG 0.630299 8_2:-896016 Msa1226520:CDS
GGTAATCTGTAACATCGTCT+GGG 0.631041 8_2:+894899 None:intergenic
GGCAATAAAAGCAAGTCGGT+AGG 0.631539 8_2:+896911 None:intergenic
GAGGAGACCGTAATGCAAGA+AGG 0.631602 8_2:-893954 Msa1226520:intron
AATGATAATAACGATGCTGA+TGG 0.632424 8_2:-894206 Msa1226520:CDS
AGAATAACATCCAATGACCT+AGG 0.632771 8_2:+897246 None:intergenic
ACTGCTAAACGAACATGACG+AGG 0.634306 8_2:+894420 None:intergenic
GAATGAACTTTATTACGAAG+CGG 0.634597 8_2:-898173 Msa1226520:CDS
GAAGAAGCAGGTAGTGACGA+TGG 0.642853 8_2:-894230 Msa1226520:CDS
TCTGGGAATGAAGGTGTGAG+GGG 0.644966 8_2:-896963 Msa1226520:CDS
CTGTCTAAGACGCATGACAA+GGG 0.646104 8_2:+893980 None:intergenic
ATGTTCAAAATCAATGAACA+TGG 0.646880 8_2:+898117 None:intergenic
TTCAAGTGTCTAGAATGTGG+TGG 0.648003 8_2:-897560 Msa1226520:CDS
CCAGTTTCAGATCTGGACAA+AGG 0.648235 8_2:-898195 Msa1226520:intron
TTATCATCAGAAATGAATGT+CGG 0.648409 8_2:+897886 None:intergenic
AACCTTGAAAGTATAGCCGG+TGG 0.648631 8_2:+894949 None:intergenic
GCTTGTATCTGTAACAGGAG+TGG 0.649403 8_2:-897627 Msa1226520:CDS
AGGGAAGCTTCTCAACGCAA+GGG 0.651545 8_2:-896993 Msa1226520:CDS
ACTTTCAAGTGTCTAGAATG+TGG 0.654394 8_2:-897563 Msa1226520:CDS
TATCATACCGTCCTCCAGCA+GGG 0.656611 8_2:+895092 None:intergenic
ATTGGGACGGCGAAACAAAG+TGG 0.656734 8_2:+893295 None:intergenic
AAGTTGCTGCAATATTGGGA+CGG 0.658779 8_2:+893282 None:intergenic
GCACAATATGAGAAGCTATG+TGG 0.660506 8_2:+894878 None:intergenic
TTCTGATGATAACCCTAACA+AGG 0.660674 8_2:-897875 Msa1226520:CDS
TGAAGGCATCAGCCTTAGAG+GGG 0.664188 8_2:-896239 Msa1226520:CDS
CATGCGTCTTAGACAGCACG+AGG 0.667096 8_2:-893973 Msa1226520:CDS
CATGTAACAACAGAGCAAAG+TGG 0.668775 8_2:-897356 Msa1226520:CDS
AGTGGTAACAAGGACAAGTG+AGG 0.673592 8_2:-897609 Msa1226520:CDS
AGTTGGCAATAAAAGCAAGT+CGG 0.673960 8_2:+896907 None:intergenic
ACATTCTGATCTCTCTCCAG+GGG 0.682522 8_2:+897019 None:intergenic
AAATAATTACAGTTCCGTGG+AGG 0.693918 8_2:-893617 Msa1226520:CDS
ACAGCAATTCAAGTATACTG+AGG 0.742350 8_2:-897519 Msa1226520:intron
ATACTTTCAAAGGATCACCA+AGG 0.772896 8_2:-894003 Msa1226520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGTTTTAAATTTCTATTT+TGG - chr8_2:897093-897112 Msa1226520:intron 10.0%
!!! TTGTTTTAAATTTCTATTTT+GGG - chr8_2:897094-897113 Msa1226520:intron 10.0%
!!! TTAAATTCTAAAATTTATTC+AGG - chr8_2:897599-897618 Msa1226520:CDS 10.0%
!! AAAGAAATTAGTATATTTAT+TGG - chr8_2:897918-897937 Msa1226520:CDS 10.0%
!! AATTTCAATAAAAATCCAAT+TGG + chr8_2:893418-893437 None:intergenic 15.0%
!!! CAAAATAATACCAAATTTTA+GGG + chr8_2:893448-893467 None:intergenic 15.0%
!!! CTAAAATTTGGTATTATTTT+GGG - chr8_2:893447-893466 Msa1226520:CDS 15.0%
!!! TTATTCATAATTTAAGACTA+CGG + chr8_2:893983-894002 None:intergenic 15.0%
!! GTCTTAAATTATGAATAATA+CGG - chr8_2:893985-894004 Msa1226520:CDS 15.0%
!! AATAGATTGATAAATATTAG+GGG + chr8_2:894906-894925 None:intergenic 15.0%
!! CAATAGATTGATAAATATTA+GGG + chr8_2:894907-894926 None:intergenic 15.0%
!!! TTTTATGCTATACTTTATAT+CGG + chr8_2:895926-895945 None:intergenic 15.0%
!! TTTATATAAACAAATCTCAA+AGG + chr8_2:897658-897677 None:intergenic 15.0%
!! TTGTTTATATAAAACAATGT+CGG - chr8_2:897665-897684 Msa1226520:intron 15.0%
!! AAATATACTAATTTCTTTGA+AGG + chr8_2:897916-897935 None:intergenic 15.0%
!! TATTAATCAACAACATAATT+AGG + chr8_2:898102-898121 None:intergenic 15.0%
!!! TAATTGTTTCTGTTTTGTTT+TGG - chr8_2:893223-893242 Msa1226520:three_prime_UTR 20.0%
!!! CCAAAATAATACCAAATTTT+AGG + chr8_2:893449-893468 None:intergenic 20.0%
!!! CCTAAAATTTGGTATTATTT+TGG - chr8_2:893446-893465 Msa1226520:CDS 20.0%
!!! GTATTTTAATTTGCAAATTG+AGG - chr8_2:893686-893705 Msa1226520:CDS 20.0%
!!! TATTCATAATTTAAGACTAC+GGG + chr8_2:893982-894001 None:intergenic 20.0%
!! AATGTAAACTTTATGGAATT+TGG - chr8_2:894311-894330 Msa1226520:intron 20.0%
!!! TGATAAATATGTTTTCTGTA+TGG - chr8_2:894624-894643 Msa1226520:CDS 20.0%
!! ATAGATTGATAAATATTAGG+GGG + chr8_2:894905-894924 None:intergenic 20.0%
!! GCAATAGATTGATAAATATT+AGG + chr8_2:894908-894927 None:intergenic 20.0%
!! ATTTGATAAAGCACAATAAT+AGG - chr8_2:895712-895731 Msa1226520:intron 20.0%
!! GATAAAATTTACTTATTCAC+TGG - chr8_2:897348-897367 Msa1226520:CDS 20.0%
!!! TACAGTAGATTTTTTTCTTT+GGG + chr8_2:897414-897433 None:intergenic 20.0%
!!! TTACAGTAGATTTTTTTCTT+TGG + chr8_2:897415-897434 None:intergenic 20.0%
!!! AATTATTTTTCTCATTTTGC+TGG + chr8_2:897816-897835 None:intergenic 20.0%
!!! CTCTATAATTGCTTTAATTT+GGG + chr8_2:897872-897891 None:intergenic 20.0%
!! ATATTATTGTCTTCATTTAC+AGG - chr8_2:898316-898335 Msa1226520:intron 20.0%
!! TATTATTGTCTTCATTTACA+GGG - chr8_2:898317-898336 Msa1226520:intron 20.0%
!!! ACAAGATTGATTAGTTAAAT+TGG + chr8_2:898463-898482 None:intergenic 20.0%
!! CTTTCTTAGATTTTCTCAAA+AGG - chr8_2:893117-893136 Msa1226520:three_prime_UTR 25.0%
! ATGTTCAAAATCAATGAACA+TGG + chr8_2:893331-893350 None:intergenic 25.0%
!!! TGAGGTATTTTTTTTCCAAT+TGG - chr8_2:893400-893419 Msa1226520:CDS 25.0%
! ATTACTGAAACCCTAAAATT+TGG - chr8_2:893435-893454 Msa1226520:CDS 25.0%
! TTATCATCAGAAATGAATGT+CGG + chr8_2:893562-893581 None:intergenic 25.0%
! TAACGAAATGAAAACGAAAT+TGG + chr8_2:893653-893672 None:intergenic 25.0%
! TTGAAAAGTTAAAGCAGATT+CGG + chr8_2:894281-894300 None:intergenic 25.0%
! GTACTGAAATGTAAACTTTA+TGG - chr8_2:894304-894323 Msa1226520:intron 25.0%
! AATTGTCATACCTGATATAT+TGG - chr8_2:894394-894413 Msa1226520:CDS 25.0%
! AATGTGAACTCAAAATCAAA+CGG + chr8_2:894772-894791 None:intergenic 25.0%
!!! GGCTTTAATCTACATATTTT+AGG - chr8_2:894857-894876 Msa1226520:CDS 25.0%
! AAAGAAAAATGAACAGGTTA+AGG + chr8_2:894934-894953 None:intergenic 25.0%
! TGTGTTAAAGAAAAATGAAC+AGG + chr8_2:894940-894959 None:intergenic 25.0%
! GTAATCAAAGAAAAAGAGAA+AGG + chr8_2:895294-895313 None:intergenic 25.0%
! AATTTAAATTTGCCAAACCA+AGG + chr8_2:895629-895648 None:intergenic 25.0%
!!! TTGGTTTGGCAAATTTAAAT+TGG - chr8_2:895628-895647 Msa1226520:intron 25.0%
! GTTAAGAATTAAGTTAGAGT+AGG - chr8_2:895808-895827 Msa1226520:intron 25.0%
! TTTATCAAACATGAATTGAG+AGG - chr8_2:895950-895969 Msa1226520:intron 25.0%
! AAAGATGAATTCAAAACAAG+TGG - chr8_2:895990-896009 Msa1226520:CDS 25.0%
! AAGATGAATTCAAAACAAGT+GGG - chr8_2:895991-896010 Msa1226520:CDS 25.0%
!!! TTATGTAAGAACTTGTTTTC+AGG - chr8_2:896079-896098 Msa1226520:CDS 25.0%
!!! ATTTTTTTACTGGCATTTGA+GGG - chr8_2:896189-896208 Msa1226520:CDS 25.0%
!!! GAAAGTATCTCATATTTGAT+TGG - chr8_2:896222-896241 Msa1226520:CDS 25.0%
! CAATAAGGTAATTAATAACC+AGG + chr8_2:896416-896435 None:intergenic 25.0%
! TTACCTTATTGAGTTTAACT+TGG - chr8_2:896425-896444 Msa1226520:intron 25.0%
! ATTGTACTGAAACAAAGAAA+GGG + chr8_2:896467-896486 None:intergenic 25.0%
!!! TTGAACACTGCTTTTTATTT+TGG - chr8_2:896687-896706 Msa1226520:intron 25.0%
! TAAGTAAGAAAGAAGCAAAA+AGG + chr8_2:896734-896753 None:intergenic 25.0%
!! CGATTTTCTGATTTTATAAC+AGG - chr8_2:896997-897016 Msa1226520:CDS 25.0%
!!! ACAGTAGATTTTTTTCTTTG+GGG + chr8_2:897413-897432 None:intergenic 25.0%
! TAACTGATGAATACTTTCAA+AGG - chr8_2:897432-897451 Msa1226520:intron 25.0%
!! ATTGAAAGTTGAATTTTCTG+TGG - chr8_2:897723-897742 Msa1226520:intron 25.0%
!! TTGAAAGTTGAATTTTCTGT+GGG - chr8_2:897724-897743 Msa1226520:intron 25.0%
! CCTCTATAATTGCTTTAATT+TGG + chr8_2:897873-897892 None:intergenic 25.0%
! CCAAATTAAAGCAATTATAG+AGG - chr8_2:897870-897889 Msa1226520:CDS 25.0%
!! TTTTCAGTAGTAAACTGAAT+TGG + chr8_2:898251-898270 None:intergenic 25.0%
! AAGTGAAAATGATTAACTAC+AGG + chr8_2:898411-898430 None:intergenic 25.0%
!!! AAACGATTTTAGTATAGAAC+AGG - chr8_2:898433-898452 Msa1226520:five_prime_UTR 25.0%
AAACCTAACTTCCAAAGTTT+GGG + chr8_2:893014-893033 None:intergenic 30.0%
GAATGAACTTTATTACGAAG+CGG - chr8_2:893272-893291 Msa1226520:three_prime_UTR 30.0%
AAAATCAATGAACATGGTGT+TGG + chr8_2:893325-893344 None:intergenic 30.0%
CTATCTCTGATGAATATTTG+AGG - chr8_2:893382-893401 Msa1226520:CDS 30.0%
!! TTTGTGTTGTTGTTGATGAT+AGG - chr8_2:893485-893504 Msa1226520:intron 30.0%
GACAATTGGAATGTTATAGA+AGG + chr8_2:893608-893627 None:intergenic 30.0%
ATAACATTCCAATTGTCAAG+AGG - chr8_2:893611-893630 Msa1226520:CDS 30.0%
TGAATATACCTCTTGACAAT+TGG + chr8_2:893622-893641 None:intergenic 30.0%
! TAATTTGCAAATTGAGGCTT+TGG - chr8_2:893692-893711 Msa1226520:intron 30.0%
!! TCTGTGTTCGATGTTTTTAT+AGG - chr8_2:893763-893782 Msa1226520:intron 30.0%
!! TTCGATGTTTTTATAGGCTA+AGG - chr8_2:893769-893788 Msa1226520:intron 30.0%
!! TCGATGTTTTTATAGGCTAA+GGG - chr8_2:893770-893789 Msa1226520:intron 30.0%
! TTTTTATAGGCTAAGGGAAT+TGG - chr8_2:893776-893795 Msa1226520:intron 30.0%
! AATCAGTAAATTTGCTCTCT+TGG + chr8_2:894126-894145 None:intergenic 30.0%
AAGAGAGCAAATTTACTGAT+TGG - chr8_2:894125-894144 Msa1226520:intron 30.0%
! CAAATTTACTGATTGGCAAA+GGG - chr8_2:894132-894151 Msa1226520:intron 30.0%
TGAAAAGTTAAAGCAGATTC+GGG + chr8_2:894280-894299 None:intergenic 30.0%
AATATTAGGGGGAAATAACA+GGG + chr8_2:894894-894913 None:intergenic 30.0%
AAATATTAGGGGGAAATAAC+AGG + chr8_2:894895-894914 None:intergenic 30.0%
! ATTTGACTGGTTGATTTAAC+AGG - chr8_2:895032-895051 Msa1226520:intron 30.0%
! TCTTGATGACCAAAAATAGT+TGG + chr8_2:895132-895151 None:intergenic 30.0%
GACATAAACGTTTGTATTGT+TGG - chr8_2:895228-895247 Msa1226520:intron 30.0%
TTCTTTGATTACTTTCATGC+TGG - chr8_2:895302-895321 Msa1226520:CDS 30.0%
TCATGTATGGTTATCATTTC+AGG - chr8_2:895344-895363 Msa1226520:CDS 30.0%
TTCATTTGTGTTTGTATCCT+TGG - chr8_2:895609-895628 Msa1226520:intron 30.0%
! AGTTGAATCTGGTTTAAACT+AGG + chr8_2:895670-895689 None:intergenic 30.0%
! AATAGGATTAGAGTTGCTTT+AGG - chr8_2:895729-895748 Msa1226520:intron 30.0%
! TTAGGTTTAAAATTACTGCC+TGG - chr8_2:895747-895766 Msa1226520:intron 30.0%
!!! TCATTGATTCACTATTTTCC+AGG + chr8_2:895768-895787 None:intergenic 30.0%
! ATTACAACTCGCAAACATTT+TGG + chr8_2:895883-895902 None:intergenic 30.0%
!! ACTTTATATCGGTTTCTGAA+TGG + chr8_2:895915-895934 None:intergenic 30.0%
TCAAGCACTTTATCATTATC+TGG - chr8_2:896025-896044 Msa1226520:CDS 30.0%
CATTGATGAATTTGACAAGA+TGG - chr8_2:896139-896158 Msa1226520:intron 30.0%
!!! CATTTTTTTACTGGCATTTG+AGG - chr8_2:896188-896207 Msa1226520:CDS 30.0%
CTCATATTTGATTGGATTGA+AGG - chr8_2:896230-896249 Msa1226520:CDS 30.0%
ACTATTAGTATCACAAAAGC+AGG - chr8_2:896282-896301 Msa1226520:CDS 30.0%
GAAAGGGCAAAAACTAAATT+AGG + chr8_2:896451-896470 None:intergenic 30.0%
CATTGTACTGAAACAAAGAA+AGG + chr8_2:896468-896487 None:intergenic 30.0%
! TTCTTTGTTTCAGTACAATG+TGG - chr8_2:896468-896487 Msa1226520:intron 30.0%
! TGGTTTAAGAGTTTTTGCAT+AGG + chr8_2:896662-896681 None:intergenic 30.0%
TGCAAAAACTCTTAAACCAA+AGG - chr8_2:896663-896682 Msa1226520:intron 30.0%
! CAGGTGTTTAATGATTTTAG+AGG - chr8_2:896928-896947 Msa1226520:CDS 30.0%
!! TGTTTAATGATTTTAGAGGC+TGG - chr8_2:896932-896951 Msa1226520:CDS 30.0%
! TTGTATATGTTTTCCTTAGC+TGG - chr8_2:896966-896985 Msa1226520:CDS 30.0%
TGCTGCAAACTTCTATAATA+AGG - chr8_2:897053-897072 Msa1226520:CDS 30.0%
GCAAACTTCTATAATAAGGT+AGG - chr8_2:897057-897076 Msa1226520:CDS 30.0%
TGAGTTTCAAGATCAAGATA+TGG - chr8_2:897190-897209 Msa1226520:intron 30.0%
AATGATAATAACGATGCTGA+TGG - chr8_2:897239-897258 Msa1226520:CDS 30.0%
!!! CAGTAGATTTTTTTCTTTGG+GGG + chr8_2:897412-897431 None:intergenic 30.0%
GTTAAAACCTTCTTGCATTA+CGG + chr8_2:897501-897520 None:intergenic 30.0%
CAACTTTCAATATGATCACA+TGG + chr8_2:897714-897733 None:intergenic 30.0%
GAAAAATAATTACAGTTCCG+TGG - chr8_2:897825-897844 Msa1226520:intron 30.0%
TGCTAGAAATGATAGAACTT+TGG - chr8_2:898068-898087 Msa1226520:CDS 30.0%
!! ACTGAAAAGTTTGATGATGT+TGG - chr8_2:898263-898282 Msa1226520:intron 30.0%
ATTTAAGAGTTGAACGATGT+CGG - chr8_2:898347-898366 Msa1226520:CDS 30.0%
AGAAACCATTTCCCAAACTT+TGG - chr8_2:893000-893019 Msa1226520:three_prime_UTR 35.0%
AACTTCCAAAGTTTGGGAAA+TGG + chr8_2:893008-893027 None:intergenic 35.0%
! TTTCCCAAACTTTGGAAGTT+AGG - chr8_2:893008-893027 Msa1226520:three_prime_UTR 35.0%
GAAACCTAACTTCCAAAGTT+TGG + chr8_2:893015-893034 None:intergenic 35.0%
TTCTGATGATAACCCTAACA+AGG - chr8_2:893570-893589 Msa1226520:intron 35.0%
CAACGTTGATATCCTTGTTA+GGG + chr8_2:893585-893604 None:intergenic 35.0%
! ACTTTCAAGTGTCTAGAATG+TGG - chr8_2:893882-893901 Msa1226520:intron 35.0%
ACAGCAATTCAAGTATACTG+AGG - chr8_2:893926-893945 Msa1226520:intron 35.0%
GTAGCATTTGGACAAATTGT+TGG + chr8_2:894070-894089 None:intergenic 35.0%
CTGTTGTTACATGTAGCATT+TGG + chr8_2:894082-894101 None:intergenic 35.0%
ATGTAACAACAGAGCAAAGT+GGG - chr8_2:894090-894109 Msa1226520:intron 35.0%
! GCAAATTTACTGATTGGCAA+AGG - chr8_2:894131-894150 Msa1226520:intron 35.0%
AGAATAACATCCAATGACCT+AGG + chr8_2:894202-894221 None:intergenic 35.0%
ATGAGATTGTAGAACATGCT+AGG - chr8_2:894227-894246 Msa1226520:CDS 35.0%
TGAGATTGTAGAACATGCTA+GGG - chr8_2:894228-894247 Msa1226520:CDS 35.0%
GAAAAGTTAAAGCAGATTCG+GGG + chr8_2:894279-894298 None:intergenic 35.0%
GTAAAAATCACCCTGCAAAT+TGG + chr8_2:894365-894384 None:intergenic 35.0%
! ATTTGCAGGGTGATTTTTAC+TGG - chr8_2:894365-894384 Msa1226520:intron 35.0%
AGTTGGCAATAAAAGCAAGT+CGG + chr8_2:894541-894560 None:intergenic 35.0%
! TTTTATTGCCAACTCTGTTC+AGG - chr8_2:894547-894566 Msa1226520:CDS 35.0%
GTAGAAGAGAAATAGACATC+AGG - chr8_2:894667-894686 Msa1226520:CDS 35.0%
AGACATCAGGAATAGAAAGA+AGG - chr8_2:894680-894699 Msa1226520:intron 35.0%
ATCTGCAATTCACTGTAAGT+TGG - chr8_2:894718-894737 Msa1226520:intron 35.0%
TGACCAACACTATATTTGAC+TGG - chr8_2:895019-895038 Msa1226520:intron 35.0%
CAACCAGTCAAATATAGTGT+TGG + chr8_2:895025-895044 None:intergenic 35.0%
TGGATGAAGTTCAAAGAATG+AGG - chr8_2:895064-895083 Msa1226520:intron 35.0%
! AGTGTAGCTCCAACTATTTT+TGG - chr8_2:895120-895139 Msa1226520:CDS 35.0%
ATCCTTCTTATGCTAATGAG+TGG - chr8_2:895165-895184 Msa1226520:CDS 35.0%
TCCTTCTTATGCTAATGAGT+GGG - chr8_2:895166-895185 Msa1226520:CDS 35.0%
GTTCACAAATCTACTCATGA+AGG - chr8_2:895189-895208 Msa1226520:CDS 35.0%
CGAATTGAATGGATCATGTA+TGG - chr8_2:895331-895350 Msa1226520:CDS 35.0%
ATACAAAACTCTCCAGTTTC+TGG + chr8_2:895457-895476 None:intergenic 35.0%
!! AACTGGAGAGTTTTGTATTG+AGG - chr8_2:895459-895478 Msa1226520:intron 35.0%
CTTCCACTAATACAAAAGAG+CGG + chr8_2:895496-895515 None:intergenic 35.0%
TTGTGTTTGTATCCTTGGTT+TGG - chr8_2:895614-895633 Msa1226520:intron 35.0%
ACAGTAGAACTAGTTGAATC+TGG + chr8_2:895681-895700 None:intergenic 35.0%
AATGCTTAGTTCAGAATCCA+TGG + chr8_2:895860-895879 None:intergenic 35.0%
AATTCATCTTTACCGAACTC+AGG + chr8_2:895981-896000 None:intergenic 35.0%
!!! AGAGGCATGCATTTTTTTAC+TGG - chr8_2:896179-896198 Msa1226520:intron 35.0%
ATTGAAGGTTGCAATTCATG+AGG - chr8_2:896245-896264 Msa1226520:CDS 35.0%
TGATAAGTCTAAACCACTGA+AGG - chr8_2:896371-896390 Msa1226520:CDS 35.0%
GAACATGTTATTACCTTCAG+TGG + chr8_2:896387-896406 None:intergenic 35.0%
AATAACATGTTCTGCTAACC+TGG - chr8_2:896395-896414 Msa1226520:intron 35.0%
AGGCCAAGTTAAACTCAATA+AGG + chr8_2:896431-896450 None:intergenic 35.0%
! TCAAACCTTGAAAGTATAGC+CGG + chr8_2:896502-896521 None:intergenic 35.0%
AAAAGCAGTGTTCAAACCTT+TGG + chr8_2:896682-896701 None:intergenic 35.0%
!!! TACTTTTTTTCCTTGCAGAG+TGG - chr8_2:897145-897164 Msa1226520:intron 35.0%
AGACGATTGCAAGGTAAAAT+GGG + chr8_2:897324-897343 None:intergenic 35.0%
TAGACGATTGCAAGGTAAAA+TGG + chr8_2:897325-897344 None:intergenic 35.0%
! TTTTACCTTGCAATCGTCTA+TGG - chr8_2:897325-897344 Msa1226520:CDS 35.0%
TTTACCTTGCAATCGTCTAT+GGG - chr8_2:897326-897345 Msa1226520:CDS 35.0%
ATACTTTCAAAGGATCACCA+AGG - chr8_2:897442-897461 Msa1226520:intron 35.0%
!! TTATTCAGGTTCTGAACATC+TGG - chr8_2:897613-897632 Msa1226520:CDS 35.0%
CAATATGATCACATGGAGTT+TGG + chr8_2:897707-897726 None:intergenic 35.0%
AGCAACGGGATTTGATTAAA+TGG - chr8_2:897782-897801 Msa1226520:intron 35.0%
AAATAATTACAGTTCCGTGG+AGG - chr8_2:897828-897847 Msa1226520:intron 35.0%
CATTTGATCGTGATAGATGA+TGG - chr8_2:897997-898016 Msa1226520:intron 35.0%
AAATGATAGAACTTTGGCTG+TGG - chr8_2:898074-898093 Msa1226520:CDS 35.0%
CAAACTCTTTCATCACTACT+AGG + chr8_2:898126-898145 None:intergenic 35.0%
CTAGTAGTGATGAAAGAGTT+TGG - chr8_2:898124-898143 Msa1226520:CDS 35.0%
! TTCAACCGATTCAGCGAAAA+TGG - chr8_2:893043-893062 Msa1226520:three_prime_UTR 40.0%
! TGCTTCCATTTTCGCTGAAT+CGG + chr8_2:893051-893070 None:intergenic 40.0%
!! TCAGCGAAAATGGAAGCATT+CGG - chr8_2:893053-893072 Msa1226520:three_prime_UTR 40.0%
!!! GAAAGCGTTTTCAACCCTAA+CGG + chr8_2:893102-893121 None:intergenic 40.0%
GCAACGTTGATATCCTTGTT+AGG + chr8_2:893586-893605 None:intergenic 40.0%
!!! GAGGCTTTGGAGTTTTGATT+AGG - chr8_2:893705-893724 Msa1226520:intron 40.0%
!!! GGAGTTTTGATTAGGTCTGT+CGG - chr8_2:893713-893732 Msa1226520:intron 40.0%
GAATTGGCTACATCAGAGAT+TGG - chr8_2:893792-893811 Msa1226520:intron 40.0%
CTAGACACTTGAAAGTTCCT+TGG + chr8_2:893878-893897 None:intergenic 40.0%
! TTCAAGTGTCTAGAATGTGG+TGG - chr8_2:893885-893904 Msa1226520:intron 40.0%
CATGTAACAACAGAGCAAAG+TGG - chr8_2:894089-894108 Msa1226520:intron 40.0%
CACAAACTGTCCAATTTGCA+GGG - chr8_2:894352-894371 Msa1226520:intron 40.0%
CATACCTGATATATTGGCGT+TGG - chr8_2:894400-894419 Msa1226520:CDS 40.0%
AGAGAGATCAGAATGTCGTA+GGG - chr8_2:894433-894452 Msa1226520:intron 40.0%
ATAACGAACCTGAACAGAGT+TGG + chr8_2:894558-894577 None:intergenic 40.0%
! GGTTTGTTCCAGATTTGTGA+TGG - chr8_2:894645-894664 Msa1226520:CDS 40.0%
CTCTTCTACCATCACAAATC+TGG + chr8_2:894656-894675 None:intergenic 40.0%
TATATGCAACACCAGTCAGT+TGG + chr8_2:894809-894828 None:intergenic 40.0%
GCACACATACATGATGTTCT+CGG - chr8_2:894968-894987 Msa1226520:intron 40.0%
! ACAAGCTTGGTGAAGAAATC+TGG + chr8_2:895096-895115 None:intergenic 40.0%
AGCTACACTTTCAACAAGCT+TGG + chr8_2:895109-895128 None:intergenic 40.0%
CCTTCTTATGCTAATGAGTG+GGG - chr8_2:895167-895186 Msa1226520:CDS 40.0%
AAACGTTTATGTCCCCTCTA+AGG + chr8_2:895221-895240 None:intergenic 40.0%
AATTGAGACTTTGCACAGCT+AGG + chr8_2:895258-895277 None:intergenic 40.0%
CCAGATGTATACACAGATCT+TGG + chr8_2:895388-895407 None:intergenic 40.0%
CCAAGATCTGTGTATACATC+TGG - chr8_2:895385-895404 Msa1226520:intron 40.0%
ATAAGTTTGTCTGTCCACCA+TGG - chr8_2:895840-895859 Msa1226520:intron 40.0%
!! GTAAGAACTTGTTTTCAGGC+CGG - chr8_2:896083-896102 Msa1226520:intron 40.0%
CAAGATGGACATAAGAGATC+AGG - chr8_2:896154-896173 Msa1226520:intron 40.0%
GACATAAGAGATCAGGTAAG+AGG - chr8_2:896161-896180 Msa1226520:intron 40.0%
GGTAATCTGTAACATCGTCT+GGG + chr8_2:896549-896568 None:intergenic 40.0%
TGGTAATCTGTAACATCGTC+TGG + chr8_2:896550-896569 None:intergenic 40.0%
GCACAATATGAGAAGCTATG+TGG + chr8_2:896570-896589 None:intergenic 40.0%
TGACGTTAGCTGCATTAATC+AGG + chr8_2:896758-896777 None:intergenic 40.0%
GTCAGATGCAAGAAAACTAC+TGG - chr8_2:896774-896793 Msa1226520:CDS 40.0%
CAGGATTTGTATCAGCTCTA+CGG + chr8_2:896819-896838 None:intergenic 40.0%
TGATACAAATCCTGGCAGTA+GGG - chr8_2:896825-896844 Msa1226520:intron 40.0%
TTGCATATCGGATGACAGTT+AGG - chr8_2:896848-896867 Msa1226520:intron 40.0%
! AAGGTGTCATCTGGATAATC+AGG - chr8_2:896909-896928 Msa1226520:CDS 40.0%
AATCGTCTTTAGACCAGCTA+AGG + chr8_2:896982-897001 None:intergenic 40.0%
!!! CTATTTTGGGAGCTAGCTTT+TGG - chr8_2:897107-897126 Msa1226520:intron 40.0%
GATTGCAAGGTAAAATGGGT+AGG + chr8_2:897320-897339 None:intergenic 40.0%
TTATCCCATAGACGATTGCA+AGG + chr8_2:897333-897352 None:intergenic 40.0%
TCTGTGGGTTTATCTATTGC+AGG - chr8_2:897739-897758 Msa1226520:intron 40.0%
GGTTTATCTATTGCAGGAAG+TGG - chr8_2:897745-897764 Msa1226520:intron 40.0%
AAGTTGCTGCAATATTGGGA+CGG + chr8_2:898166-898185 None:intergenic 40.0%
CACCAAGTTGCTGCAATATT+GGG + chr8_2:898170-898189 None:intergenic 40.0%
!!! CAAGCTTTTCTTGGTAATGC+TGG - chr8_2:898210-898229 Msa1226520:intron 40.0%
!! TCTTGGTAATGCTGGAAAAC+TGG - chr8_2:898218-898237 Msa1226520:intron 40.0%
!! GGAAGCATTCGGTGGTTATT+TGG - chr8_2:893064-893083 Msa1226520:three_prime_UTR 45.0%
!! TGGTTGATGAGAAAGCCGTT+AGG - chr8_2:893084-893103 Msa1226520:three_prime_UTR 45.0%
!! GGTTGATGAGAAAGCCGTTA+GGG - chr8_2:893085-893104 Msa1226520:three_prime_UTR 45.0%
TGGATCACCAGTTTCAGATC+TGG - chr8_2:893243-893262 Msa1226520:three_prime_UTR 45.0%
! CCTTTGTCCAGATCTGAAAC+TGG + chr8_2:893253-893272 None:intergenic 45.0%
CCAGTTTCAGATCTGGACAA+AGG - chr8_2:893250-893269 Msa1226520:three_prime_UTR 45.0%
TTGCAGGCATTCTGCAAGTA+AGG + chr8_2:893517-893536 None:intergenic 45.0%
!! TGCCTGCAAGAGGTTTGTTA+TGG - chr8_2:893528-893547 Msa1226520:intron 45.0%
CTCCATAACAAACCTCTTGC+AGG + chr8_2:893533-893552 None:intergenic 45.0%
TGGCTACATCAGAGATTGGT+AGG - chr8_2:893796-893815 Msa1226520:intron 45.0%
GGTAGGCTTGTATCTGTAAC+AGG - chr8_2:893813-893832 Msa1226520:intron 45.0%
GCTTGTATCTGTAACAGGAG+TGG - chr8_2:893818-893837 Msa1226520:intron 45.0%
CTGTAACAGGAGTGGTAACA+AGG - chr8_2:893826-893845 Msa1226520:intron 45.0%
AGTGGTAACAAGGACAAGTG+AGG - chr8_2:893836-893855 Msa1226520:intron 45.0%
AAAGTTCCTTGGAGAAGCTC+AGG + chr8_2:893867-893886 None:intergenic 45.0%
ATTGTAGAACATGCTAGGGC+TGG - chr8_2:894232-894251 Msa1226520:CDS 45.0%
CCTGCAAATTGGACAGTTTG+TGG + chr8_2:894354-894373 None:intergenic 45.0%
CCACAAACTGTCCAATTTGC+AGG - chr8_2:894351-894370 Msa1226520:intron 45.0%
GAAGCCAACGCCAATATATC+AGG + chr8_2:894407-894426 None:intergenic 45.0%
ACATTCTGATCTCTCTCCAG+GGG + chr8_2:894429-894448 None:intergenic 45.0%
GACATTCTGATCTCTCTCCA+GGG + chr8_2:894430-894449 None:intergenic 45.0%
GAGAGAGATCAGAATGTCGT+AGG - chr8_2:894432-894451 Msa1226520:intron 45.0%
! ATCTGGGAATGAAGGTGTGA+GGG - chr8_2:894481-894500 Msa1226520:intron 45.0%
TAAAAGCAAGTCGGTAGGAG+AGG + chr8_2:894532-894551 None:intergenic 45.0%
GGCAATAAAAGCAAGTCGGT+AGG + chr8_2:894537-894556 None:intergenic 45.0%
TTAGGGGGAAATAACAGGGA+TGG + chr8_2:894890-894909 None:intergenic 45.0%
! CTGGTTGATTTAACAGGCTC+AGG - chr8_2:895038-895057 Msa1226520:intron 45.0%
GATTTAACAGGCTCAGGAAC+TGG - chr8_2:895044-895063 Msa1226520:intron 45.0%
CCCCACTCATTAGCATAAGA+AGG + chr8_2:895170-895189 None:intergenic 45.0%
!! ATGAAGGCATCAGCCTTAGA+GGG - chr8_2:895205-895224 Msa1226520:intron 45.0%
!! GCTGGTTTGTGCGAATTGAA+TGG - chr8_2:895320-895339 Msa1226520:CDS 45.0%
GAAAGTCATCATCTGCTGCT+GGG - chr8_2:895407-895426 Msa1226520:intron 45.0%
! CTGCCGCTCTTTTGTATTAG+TGG - chr8_2:895490-895509 Msa1226520:intron 45.0%
CAGCTCTATAGAACTAGCGT+AGG - chr8_2:895541-895560 Msa1226520:intron 45.0%
GCTTAGTTCAGAATCCATGG+TGG + chr8_2:895857-895876 None:intergenic 45.0%
!! TGAGAGGTATTGCCTGAGTT+CGG - chr8_2:895966-895985 Msa1226520:intron 45.0%
! GCTTTGATGCTTGCTGACAA+TGG - chr8_2:896107-896126 Msa1226520:intron 45.0%
TTACTGGCATTTGAGGGTCA+TGG - chr8_2:896195-896214 Msa1226520:CDS 45.0%
GGTTGCAATTCATGAGGCTA+TGG - chr8_2:896251-896270 Msa1226520:CDS 45.0%
! TTCCACCGGCTATACTTTCA+AGG - chr8_2:896494-896513 Msa1226520:intron 45.0%
! AACCTTGAAAGTATAGCCGG+TGG + chr8_2:896499-896518 None:intergenic 45.0%
AGTTCTGCTGTAGTGAACGT+TGG + chr8_2:896625-896644 None:intergenic 45.0%
CGTAGAGCTGATACAAATCC+TGG - chr8_2:896817-896836 Msa1226520:intron 45.0%
CTGATACAAATCCTGGCAGT+AGG - chr8_2:896824-896843 Msa1226520:intron 45.0%
! GGCAGTTGGAAGCTTTAATC+AGG - chr8_2:896869-896888 Msa1226520:intron 45.0%
! GGAAGCTTTAATCAGGCTGT+CGG - chr8_2:896876-896895 Msa1226520:intron 45.0%
ATCCAGATGACACCTTGCAA+TGG + chr8_2:896905-896924 None:intergenic 45.0%
ACTGCTAAACGAACATGACG+AGG + chr8_2:897028-897047 None:intergenic 45.0%
CAAGATATGGACGAAGAAGC+AGG - chr8_2:897203-897222 Msa1226520:intron 45.0%
! TCTTTGGGGGTTAGATCCAT+CGG + chr8_2:897399-897418 None:intergenic 45.0%
! CTGTCTAAGACGCATGACAA+GGG + chr8_2:897468-897487 None:intergenic 45.0%
ACATCTGGATACCCTTTGTC+TGG - chr8_2:897628-897647 Msa1226520:CDS 45.0%
TAATTACAGTTCCGTGGAGG+AGG - chr8_2:897831-897850 Msa1226520:intron 45.0%
! TGATCGTGATAGATGATGGC+AGG - chr8_2:898001-898020 Msa1226520:intron 45.0%
GTCCCAATATTGCAGCAACT+TGG - chr8_2:898165-898184 Msa1226520:CDS 45.0%
CCACCAAGTTGCTGCAATAT+TGG + chr8_2:898171-898190 None:intergenic 45.0%
CCAATATTGCAGCAACTTGG+TGG - chr8_2:898168-898187 Msa1226520:CDS 45.0%
AAGCTTGCAGCTCAAGACAA+AGG + chr8_2:898197-898216 None:intergenic 45.0%
! CTTGAGCTGCAAGCTTTTCT+TGG - chr8_2:898201-898220 Msa1226520:intron 45.0%
!!! TATGAATAATATAAAATTTT+TGG - chr8_2:894836-894855 Msa1226520:CDS 5.0%
!! GCGAAAATGGAAGCATTCGG+TGG - chr8_2:893056-893075 Msa1226520:three_prime_UTR 50.0%
ACTTGCAGAATGCCTGCAAG+AGG - chr8_2:893518-893537 Msa1226520:intron 50.0%
TGATTAGGTCTGTCGGTGTG+AGG - chr8_2:893720-893739 Msa1226520:intron 50.0%
GATTAGGTCTGTCGGTGTGA+GGG - chr8_2:893721-893740 Msa1226520:intron 50.0%
TTGGCAAAGGGTCAGAATGC+AGG - chr8_2:894144-894163 Msa1226520:intron 50.0%
ACGTCCAATGAGATACCTGC+TGG - chr8_2:894169-894188 Msa1226520:CDS 50.0%
AGAGCCAGCAGGTATCTCAT+TGG + chr8_2:894176-894195 None:intergenic 50.0%
CGACATTCTGATCTCTCTCC+AGG + chr8_2:894431-894450 None:intergenic 50.0%
TAGGGAAGCTTCTCAACGCA+AGG - chr8_2:894451-894470 Msa1226520:intron 50.0%
AGGGAAGCTTCTCAACGCAA+GGG - chr8_2:894452-894471 Msa1226520:intron 50.0%
!! AACGCAAGGGTGCTTCATCT+GGG - chr8_2:894465-894484 Msa1226520:intron 50.0%
GGTGCTTCATCTGGGAATGA+AGG - chr8_2:894473-894492 Msa1226520:intron 50.0%
! CATCTGGGAATGAAGGTGTG+AGG - chr8_2:894480-894499 Msa1226520:intron 50.0%
! TCTGGGAATGAAGGTGTGAG+GGG - chr8_2:894482-894501 Msa1226520:intron 50.0%
AGCTGTCATGACCAACTGAC+TGG - chr8_2:894795-894814 Msa1226520:CDS 50.0%
!! CATGAAGGCATCAGCCTTAG+AGG - chr8_2:895204-895223 Msa1226520:intron 50.0%
!! TGAAGGCATCAGCCTTAGAG+GGG - chr8_2:895206-895225 Msa1226520:intron 50.0%
GGAAAGTCATCATCTGCTGC+TGG - chr8_2:895406-895425 Msa1226520:intron 50.0%
GTTGACTGCAACTGTTGCCA+AGG - chr8_2:895429-895448 Msa1226520:intron 50.0%
GTTGCCAAGGAACCAGAAAC+TGG - chr8_2:895442-895461 Msa1226520:intron 50.0%
!! CTCTCCAGTTTCTGGTTCCT+TGG + chr8_2:895449-895468 None:intergenic 50.0%
TATCATACCGTCCTCCAGCA+GGG + chr8_2:896356-896375 None:intergenic 50.0%
TTATCATACCGTCCTCCAGC+AGG + chr8_2:896357-896376 None:intergenic 50.0%
GTACAATGTGGCTCTTCCAC+CGG - chr8_2:896480-896499 Msa1226520:intron 50.0%
CTGGCAGTAGGGTTGCATAT+CGG - chr8_2:896836-896855 Msa1226520:intron 50.0%
TCGGATGACAGTTAGGCAGT+TGG - chr8_2:896855-896874 Msa1226520:intron 50.0%
! AGCTTTAATCAGGCTGTCGG+AGG - chr8_2:896879-896898 Msa1226520:intron 50.0%
TCACTTGACTCCACTCTGCA+AGG + chr8_2:897158-897177 None:intergenic 50.0%
GAAGAAGCAGGTAGTGACGA+TGG - chr8_2:897215-897234 Msa1226520:CDS 50.0%
AACGATGCTGATGGTCAAGC+TGG - chr8_2:897248-897267 Msa1226520:CDS 50.0%
AGCTGGAAACTCTACTGCTC+AGG - chr8_2:897265-897284 Msa1226520:CDS 50.0%
CTTGCAGAAAAACCAGCCGA+TGG - chr8_2:897380-897399 Msa1226520:CDS 50.0%
! GCTGTCTAAGACGCATGACA+AGG + chr8_2:897469-897488 None:intergenic 50.0%
GAGGAGACCGTAATGCAAGA+AGG - chr8_2:897491-897510 Msa1226520:intron 50.0%
! TCAAAGGTGCGCCAGACAAA+GGG + chr8_2:897642-897661 None:intergenic 50.0%
ATTGCAGGAAGTGGCTTAGC+TGG - chr8_2:897754-897773 Msa1226520:intron 50.0%
TTGCAGGAAGTGGCTTAGCT+GGG - chr8_2:897755-897774 Msa1226520:intron 50.0%
GCTTAGCTGGGATGAAGCAA+CGG - chr8_2:897767-897786 Msa1226520:intron 50.0%
CTTAGCTGGGATGAAGCAAC+GGG - chr8_2:897768-897787 Msa1226520:intron 50.0%
TTCAACTTTCGCCTCCTCCA+CGG + chr8_2:897845-897864 None:intergenic 50.0%
ATTGGGACGGCGAAACAAAG+TGG + chr8_2:898153-898172 None:intergenic 50.0%
GTTCGACCTGAGCTTCTCCA+AGG - chr8_2:893858-893877 Msa1226520:intron 55.0%
TGGCTCTCTGCCTAGGTCAT+TGG - chr8_2:894189-894208 Msa1226520:CDS 55.0%
!! ATATTGGCGTTGGCTTCCCC+TGG - chr8_2:894410-894429 Msa1226520:CDS 55.0%
!! CAACGCAAGGGTGCTTCATC+TGG - chr8_2:894464-894483 Msa1226520:intron 55.0%
! ATGAAGGTGTGAGGGGCCTT+AGG - chr8_2:894489-894508 Msa1226520:intron 55.0%
! TGAAGGTGTGAGGGGCCTTA+GGG - chr8_2:894490-894509 Msa1226520:intron 55.0%
CTCTGACTCCCAAAGCCCTA+AGG + chr8_2:894508-894527 None:intergenic 55.0%
GTCAGCAAGCATCAAAGCGC+CGG + chr8_2:896105-896124 None:intergenic 55.0%
GGCATTTGAGGGTCATGGAC+TGG - chr8_2:896200-896219 Msa1226520:CDS 55.0%
CGATATGCAACCCTACTGCC+AGG + chr8_2:896838-896857 None:intergenic 55.0%
! GGCCATTGCAAGGTGTCATC+TGG - chr8_2:896900-896919 Msa1226520:CDS 55.0%
!! CACCTCACCATTGGTTCCAG+CGG + chr8_2:897294-897313 None:intergenic 55.0%
GGTAGGAGACACCTCACCAT+TGG + chr8_2:897303-897322 None:intergenic 55.0%
AAGACGCATGACAAGGGCCT+TGG + chr8_2:897462-897481 None:intergenic 55.0%
CATGCGTCTTAGACAGCACG+AGG - chr8_2:897472-897491 Msa1226520:intron 55.0%
! CTCAAAGGTGCGCCAGACAA+AGG + chr8_2:897643-897662 None:intergenic 55.0%
CAAGCAGCATCAGAAGCTGC+TGG - chr8_2:898024-898043 Msa1226520:intron 55.0%
!! TACCTGCTGGCTCTCTGCCT+AGG - chr8_2:894182-894201 Msa1226520:CDS 60.0%
TGTGAGGGGCCTTAGGGCTT+TGG - chr8_2:894496-894515 Msa1226520:intron 60.0%
GTGAGGGGCCTTAGGGCTTT+GGG - chr8_2:894497-894516 Msa1226520:intron 60.0%
! AGGGTTGGCAGCGGCAAGAA+TGG + chr8_2:896337-896356 None:intergenic 60.0%
ATACCGTCCTCCAGCAGGGT+TGG + chr8_2:896352-896371 None:intergenic 60.0%
TCTACTGCTCAGGAAGCCGC+TGG - chr8_2:897275-897294 Msa1226520:CDS 60.0%
CAGGAAGCCGCTGGAACCAA+TGG - chr8_2:897284-897303 Msa1226520:CDS 60.0%
AGCCGCTGGAACCAATGGTG+AGG - chr8_2:897289-897308 Msa1226520:CDS 60.0%
TGGGGGTTAGATCCATCGGC+TGG + chr8_2:897395-897414 None:intergenic 60.0%
GACCTAGGCAGAGAGCCAGC+AGG + chr8_2:894187-894206 None:intergenic 65.0%
! TCCTCCAGCAGGGTTGGCAG+CGG + chr8_2:896346-896365 None:intergenic 65.0%
CTGCCAACCCTGCTGGAGGA+CGG - chr8_2:896346-896365 Msa1226520:CDS 65.0%
GGCTGTCGGAGGCCATTGCA+AGG - chr8_2:896890-896909 Msa1226520:intron 65.0%
CTTGCCGCTGCCAACCCTGC+TGG - chr8_2:896339-896358 Msa1226520:CDS 70.0%
GCCGCTGCCAACCCTGCTGG+AGG - chr8_2:896342-896361 Msa1226520:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 892978 898489 892978 ID=Msa1226520;Name=Msa1226520
chr8_2 mRNA 892978 898489 892978 ID=Msa1226520-mRNA-1;Parent=Msa1226520;Name=Msa1226520-mRNA-1;_AED=0.11;_eAED=0.11;_QI=84|1|1|1|1|1|18|370|835
chr8_2 exon 892978 893491 892978 ID=Msa1226520-mRNA-1:exon:213;Parent=Msa1226520-mRNA-1
chr8_2 exon 893576 893706 893576 ID=Msa1226520-mRNA-1:exon:212;Parent=Msa1226520-mRNA-1
chr8_2 exon 893955 894080 893955 ID=Msa1226520-mRNA-1:exon:211;Parent=Msa1226520-mRNA-1
chr8_2 exon 894162 894304 894162 ID=Msa1226520-mRNA-1:exon:210;Parent=Msa1226520-mRNA-1
chr8_2 exon 894393 894448 894393 ID=Msa1226520-mRNA-1:exon:209;Parent=Msa1226520-mRNA-1
chr8_2 exon 894537 894698 894537 ID=Msa1226520-mRNA-1:exon:208;Parent=Msa1226520-mRNA-1
chr8_2 exon 894783 894986 894783 ID=Msa1226520-mRNA-1:exon:207;Parent=Msa1226520-mRNA-1
chr8_2 exon 895075 895215 895075 ID=Msa1226520-mRNA-1:exon:206;Parent=Msa1226520-mRNA-1
chr8_2 exon 895292 895366 895292 ID=Msa1226520-mRNA-1:exon:205;Parent=Msa1226520-mRNA-1
chr8_2 exon 895987 896101 895987 ID=Msa1226520-mRNA-1:exon:204;Parent=Msa1226520-mRNA-1
chr8_2 exon 896184 896413 896184 ID=Msa1226520-mRNA-1:exon:203;Parent=Msa1226520-mRNA-1
chr8_2 exon 896736 896810 896736 ID=Msa1226520-mRNA-1:exon:202;Parent=Msa1226520-mRNA-1
chr8_2 exon 896899 897094 896899 ID=Msa1226520-mRNA-1:exon:201;Parent=Msa1226520-mRNA-1
chr8_2 exon 897207 897400 897207 ID=Msa1226520-mRNA-1:exon:200;Parent=Msa1226520-mRNA-1
chr8_2 exon 897520 897682 897520 ID=Msa1226520-mRNA-1:exon:199;Parent=Msa1226520-mRNA-1
chr8_2 exon 897835 897960 897835 ID=Msa1226520-mRNA-1:exon:198;Parent=Msa1226520-mRNA-1
chr8_2 exon 898064 898213 898064 ID=Msa1226520-mRNA-1:exon:197;Parent=Msa1226520-mRNA-1
chr8_2 exon 898329 898489 898329 ID=Msa1226520-mRNA-1:exon:196;Parent=Msa1226520-mRNA-1
chr8_2 five_prime_UTR 898406 898489 898406 ID=Msa1226520-mRNA-1:five_prime_utr;Parent=Msa1226520-mRNA-1
chr8_2 CDS 898329 898405 898329 ID=Msa1226520-mRNA-1:cds;Parent=Msa1226520-mRNA-1
chr8_2 CDS 898064 898213 898064 ID=Msa1226520-mRNA-1:cds;Parent=Msa1226520-mRNA-1
chr8_2 CDS 897835 897960 897835 ID=Msa1226520-mRNA-1:cds;Parent=Msa1226520-mRNA-1
chr8_2 CDS 897520 897682 897520 ID=Msa1226520-mRNA-1:cds;Parent=Msa1226520-mRNA-1
chr8_2 CDS 897207 897400 897207 ID=Msa1226520-mRNA-1:cds;Parent=Msa1226520-mRNA-1
chr8_2 CDS 896899 897094 896899 ID=Msa1226520-mRNA-1:cds;Parent=Msa1226520-mRNA-1
chr8_2 CDS 896736 896810 896736 ID=Msa1226520-mRNA-1:cds;Parent=Msa1226520-mRNA-1
chr8_2 CDS 896184 896413 896184 ID=Msa1226520-mRNA-1:cds;Parent=Msa1226520-mRNA-1
chr8_2 CDS 895987 896101 895987 ID=Msa1226520-mRNA-1:cds;Parent=Msa1226520-mRNA-1
chr8_2 CDS 895292 895366 895292 ID=Msa1226520-mRNA-1:cds;Parent=Msa1226520-mRNA-1
chr8_2 CDS 895075 895215 895075 ID=Msa1226520-mRNA-1:cds;Parent=Msa1226520-mRNA-1
chr8_2 CDS 894783 894986 894783 ID=Msa1226520-mRNA-1:cds;Parent=Msa1226520-mRNA-1
chr8_2 CDS 894537 894698 894537 ID=Msa1226520-mRNA-1:cds;Parent=Msa1226520-mRNA-1
chr8_2 CDS 894393 894448 894393 ID=Msa1226520-mRNA-1:cds;Parent=Msa1226520-mRNA-1
chr8_2 CDS 894162 894304 894162 ID=Msa1226520-mRNA-1:cds;Parent=Msa1226520-mRNA-1
chr8_2 CDS 893955 894080 893955 ID=Msa1226520-mRNA-1:cds;Parent=Msa1226520-mRNA-1
chr8_2 CDS 893576 893706 893576 ID=Msa1226520-mRNA-1:cds;Parent=Msa1226520-mRNA-1
chr8_2 CDS 893348 893491 893348 ID=Msa1226520-mRNA-1:cds;Parent=Msa1226520-mRNA-1
chr8_2 three_prime_UTR 892978 893347 892978 ID=Msa1226520-mRNA-1:three_prime_utr;Parent=Msa1226520-mRNA-1
Gene Sequence

>Msa1226520

ATGGAAGCATTCGGTGGTTATTTGGTTGATGAGAAAGCCGTTAGGGTTGAAAACGCTTTCTTAGATTTTCTCAAAAGTTTCAGATCTGGACAAAGGAATGAACTTTATTACGAAGCGGAGATTGAAGTCATGAGAGCTAACGAATCCAACACCATGTTCATTGATTTTGAACATGTGATTAGATTCAGTGATGTTCTTCAGAAAGCTATCTCTGATGAATATTTGAGGTTCGAACCTTACTTGCAGAATGCCTGCAAGAGGTTTGTTATGGAGCTTAAGCCGACATTCATTTCTGATGATAACCCTAACAAGGATATCAACGTTGCCTTCTATAACATTCCAATTGTCAAGAGGCTAAGGGAATTGGCTACATCAGAGATTGGTAGGCTTGTATCTGTAACAGGAGTGGTAACAAGGACAAGTGAGGTTCGACCTGAGCTTCTCCAAGGAACTTTCAAGTGTCTAGAATGTGGTGGAGTTATAAAGAATGTTGAACAGCAATTCAAGTATACTGAGCCAACAATTTGTCCAAATGCTACATGTAACAACAGAGCAAAGTGGGCACTGCTTCGCCAAGAGAGCAAATTTACTGATTGGCAAAGGGTCAGAATGCAGGAGACGTCCAATGAGATACCTGCTGGCTCTCTGCCTAGGTCATTGGATGTTATTCTTCGTCATGAGATTGTAGAACATGCTAGGGCTGGTGACACGGTGATTTTTACTGGAACTGTAATTGTCATACCTGATATATTGGCGTTGGCTTCCCCTGGAGAGAGATCAGAATGTCGTAGGGAAGCTTCTCAACGCAAGGGTGCTTCATCTGGGAATGAAGGTGTGAGGGGCCTTAGGGCTTTGGGAGTCAGAGACCTCTCCTACCGACTTGCTTTTATTGCCAACTCTGTTCAGATTTGTGATGGTAGAAGAGAAATAGACATCAGGAATAGAAAGAAGGATTCAGATGAAGATGATCTGCAATTCACTGCTCAGGAACTGGATGAAGTTCAAAGAATGAGGAACACTCCAGATTTCTTCACCAAGCTTGTTGAAAGTGTAGCTCCAACTATTTTTGGTCATCAAGATATTAAGCGAGCAATCCTTCTTATGCTAATGAGTGGGGTTCACAAATCTACTCATGAAGGCATCAGCCTTAGAGGGGACATAAACGTTTGTATTGTTGGAGATCCTAGCTGTGCAAAGTCTCAATTTCTTAAGTATACTTCAAGCATTGTTCCAAGATCTGTGTATACATCTGGAAAGTCATCATCTGCTGCTGGGTTGACTGCAACTGTTGCCAAGGAACCAGAAACTGGAGAGTTTTGTATTGAGGCCGGCGCTTTGATGCTTGCTGACAATGGCATTTGCTGCATTGATGAATTTGACAAGATGGACATAAGAGATCAGGTTGCAATTCATGAGGCTATGGAACAACAAACTATTAGTATCACAAAAGCAGGAATACAAGCAACACTCAATGCTCGTACTTCCATTCTTGCCGCTGCCAACCCTGCTGGAGGACGGTATGATAAGTCTAAACCACTGAAGTACAATGTGGCTCTTCCACCGGCTATACTTTCAAGGTTTGATCTTGTATACATTATGATTGATGACCCAGACGATGTTACAGATTACCACATAGCTTCTCATATTGTGCGAGTTCATCAAAAGCGCGAAGAAGCTCTTGCTCCAACGTTCACTACAGCAGAACTGAAGCGTTATATAGCCTATGCAAAAACTCTTAAACCAAAGCTAACGTCAGATGCAAGAAAACTACTGGTAGACTCTTATGTTTCTCTCCGTAGAGCTGATACAAATCCTGGCAGTAGGGTTGCATATCGGATGACAGTTAGGCAGTTGGAAGCTTTAATCAGGCTGTCGGAGGCCATTGCAAGGTGTCATCTGGATAATCAGGTACAACCTCGTCATGTTCGTTTAGCAGTAAAACTGCTGCAAACTTCTATAATAAGAGTGGAGTCAAGTGAGATCGATTTATCTGAGTTTCAAGATCAAGATATGGACGAAGAAGCAGGTAGTGACGATGGAAATGATAATAACGATGCTGATGGTCAAGCTGGAAACTCTACTGCTCAGGAAGCCGCTGGAACCAATGAAAAACCAGCCGATGGATCTAACCCCCAAAGAAAAAAATCTACTGTAACTGATGAATACTTTCAAAGGATCACCAAGGCCCTTGTCATGCGTCTTAGACAGCACGAGGAGACCGTAATGCAAGAAGGAAGTGGCTTAGCTGGGATGAAGCAACGGGATTTGATTAAATGGTATGTAGACCAGCAAAATGAGAAAAATAATTACAGTTCCGTGGAGGAGGCGAAAGTTGAAATTTCCCAAATTAAAGCAATTATAGAGATTTTAATTCGAAGAGAGGGGCATTTGATCGTGATAGATGATGGCAGGCAAGCAGCATCAGAAGCTGCTGGTGCAGAACAATCAGAGTCTGCTGCTAGAAATGATAGAACTTTGGCTGTGGCTCCTAATTATGTTGTTGATTAA

Protein sequence

>Msa1226520

MEAFGGYLVDEKAVRVENAFLDFLKSFRSGQRNELYYEAEIEVMRANESNTMFIDFEHVIRFSDVLQKAISDEYLRFEPYLQNACKRFVMELKPTFISDDNPNKDINVAFYNIPIVKRLRELATSEIGRLVSVTGVVTRTSEVRPELLQGTFKCLECGGVIKNVEQQFKYTEPTICPNATCNNRAKWALLRQESKFTDWQRVRMQETSNEIPAGSLPRSLDVILRHEIVEHARAGDTVIFTGTVIVIPDILALASPGERSECRREASQRKGASSGNEGVRGLRALGVRDLSYRLAFIANSVQICDGRREIDIRNRKKDSDEDDLQFTAQELDEVQRMRNTPDFFTKLVESVAPTIFGHQDIKRAILLMLMSGVHKSTHEGISLRGDINVCIVGDPSCAKSQFLKYTSSIVPRSVYTSGKSSSAAGLTATVAKEPETGEFCIEAGALMLADNGICCIDEFDKMDIRDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPAGGRYDKSKPLKYNVALPPAILSRFDLVYIMIDDPDDVTDYHIASHIVRVHQKREEALAPTFTTAELKRYIAYAKTLKPKLTSDARKLLVDSYVSLRRADTNPGSRVAYRMTVRQLEALIRLSEAIARCHLDNQVQPRHVRLAVKLLQTSIIRVESSEIDLSEFQDQDMDEEAGSDDGNDNNDADGQAGNSTAQEAAGTNEKPADGSNPQRKKSTVTDEYFQRITKALVMRLRQHEETVMQEGSGLAGMKQRDLIKWYVDQQNEKNNYSSVEEAKVEISQIKAIIEILIRREGHLIVIDDGRQAASEAAGAEQSESAARNDRTLAVAPNYVVD*