AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0658640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0658640 MtrunA17_Chr8g0381871 99.369 792 5 0 1 792 44 835 0.0 1630
Msa0658640 MtrunA17_Chr2g0296441 76.649 758 131 5 1 746 41 764 0.0 1182
Msa0658640 MtrunA17_Chr4g0035581 36.177 586 324 10 34 610 197 741 4.54e-116 371
Msa0658640 MtrunA17_Chr7g0269941 37.963 540 283 9 76 609 145 638 2.70e-114 363
Msa0658640 MtrunA17_Chr4g0065401 33.959 639 348 12 9 619 66 658 2.29e-101 329
Msa0658640 MtrunA17_Chr4g0052131 32.421 694 356 15 37 670 67 707 3.14e-99 325
Msa0658640 MtrunA17_Chr4g0068511 34.564 596 320 11 38 614 283 827 5.30e-97 322
Msa0658640 MtrunA17_Chr7g0263661 31.313 594 318 13 76 610 143 705 3.76e-88 296
Msa0658640 MtrunA17_Chr2g0279361 34.358 553 298 16 70 610 116 615 7.38e-80 270
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0658640 AT5G44635.1 73.897 793 200 3 1 792 45 831 0.0 1224
Msa0658640 AT5G44635.2 71.673 819 199 4 1 792 45 857 0.0 1212
Msa0658640 AT4G02060.2 38.235 544 284 9 76 613 143 640 9.59e-116 367
Msa0658640 AT4G02060.1 38.235 544 284 9 76 613 143 640 9.59e-116 367
Msa0658640 AT2G16440.1 36.610 590 335 10 34 610 185 748 1.04e-115 370
Msa0658640 AT2G07690.1 36.655 562 295 9 76 619 134 652 2.73e-100 327
Msa0658640 AT5G46280.3 34.615 598 295 9 68 619 96 643 1.08e-99 324
Msa0658640 AT2G07690.2 36.823 554 289 9 84 619 140 650 3.32e-99 323
Msa0658640 AT5G46280.1 34.615 598 295 9 68 619 96 643 5.95e-99 324
Msa0658640 AT1G44900.1 33.760 625 342 12 11 614 258 831 1.02e-98 327
Msa0658640 AT1G44900.2 33.760 625 342 12 11 614 256 829 1.19e-98 327
Msa0658640 AT5G46280.2 34.752 564 272 8 77 594 105 618 3.17e-96 313
Msa0658640 AT3G09660.2 31.833 600 328 15 63 610 131 701 9.21e-91 302
Msa0658640 AT3G09660.3 32.161 597 327 15 63 610 131 698 1.11e-90 303
Msa0658640 AT3G09660.1 31.833 600 328 15 63 610 131 701 1.76e-90 302
Msa0658640 AT5G46280.4 35.078 516 239 8 77 546 105 570 3.74e-88 290
Msa0658640 AT2G14050.1 31.229 602 338 21 9 594 59 600 3.03e-73 252
Msa0658640 AT2G14050.2 31.229 602 338 21 9 594 59 600 3.98e-73 251

Find 195 sgRNAs with CRISPR-Local

Find 363 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTATAATTGCTTTAATT+TGG 0.072017 4_3:+68844466 None:intergenic
ATACAAAACTCTCCAGTTTC+TGG 0.160572 4_3:+68846882 None:intergenic
ACAAGATTGATTAGTTAAAT+TGG 0.199581 4_3:+68843876 None:intergenic
TGTGAGGGGCCTTAGGGCTT+TGG 0.214668 4_3:-68847840 Msa0658640:CDS
CCACCAAGTTGCTGCAATAT+TGG 0.216905 4_3:+68844168 None:intergenic
CTCTATAATTGCTTTAATTT+GGG 0.252599 4_3:+68844467 None:intergenic
CAACGCAAGGGTGCTTCATC+TGG 0.270964 4_3:-68847872 Msa0658640:CDS
GTGAGGGGCCTTAGGGCTTT+GGG 0.275142 4_3:-68847839 Msa0658640:CDS
AGCAACGGGATTTGATTAAA+TGG 0.286323 4_3:-68844554 Msa0658640:CDS
TATTAATCAACAACATAATT+AGG 0.298193 4_3:+68844237 None:intergenic
CTCTCCAGTTTCTGGTTCCT+TGG 0.319235 4_3:+68846890 None:intergenic
TGCTGCAAACTTCTATAATA+AGG 0.322371 4_3:-68845283 Msa0658640:intron
ATATTATTGTCTTCATTTAC+AGG 0.324293 4_3:-68844020 Msa0658640:three_prime_UTR
GCAACGTTGATATCCTTGTT+AGG 0.332960 4_3:+68848753 None:intergenic
ATGAAGGTGTGAGGGGCCTT+AGG 0.335308 4_3:-68847847 Msa0658640:CDS
CATGAAGGCATCAGCCTTAG+AGG 0.337585 4_3:-68847132 Msa0658640:CDS
GACATAAACGTTTGTATTGT+TGG 0.339761 4_3:-68847108 Msa0658640:CDS
CTCCATAACAAACCTCTTGC+AGG 0.345294 4_3:+68848806 None:intergenic
GTTAAAACCTTCTTGCATTA+CGG 0.350902 4_3:+68844838 None:intergenic
AATTGTCATACCTGATATAT+TGG 0.355144 4_3:-68847942 Msa0658640:CDS
GACAATTGGAATGTTATAGA+AGG 0.359993 4_3:+68848731 None:intergenic
TGGTAATCTGTAACATCGTC+TGG 0.365977 4_3:+68845789 None:intergenic
TGAATATACCTCTTGACAAT+TGG 0.372562 4_3:+68848717 None:intergenic
AATCAGTAAATTTGCTCTCT+TGG 0.374951 4_3:+68848213 None:intergenic
TGGCTCTCTGCCTAGGTCAT+TGG 0.375729 4_3:-68848147 Msa0658640:CDS
TCTTGGTAATGCTGGAAAAC+TGG 0.376020 4_3:-68844118 Msa0658640:three_prime_UTR
GGTAGGCTTGTATCTGTAAC+AGG 0.380034 4_3:-68848523 Msa0658640:CDS
GGCAGTTGGAAGCTTTAATC+AGG 0.381387 4_3:-68845467 Msa0658640:CDS
CTTGCCGCTGCCAACCCTGC+TGG 0.383099 4_3:-68845997 Msa0658640:CDS
CACCAAGTTGCTGCAATATT+GGG 0.384610 4_3:+68844169 None:intergenic
CCAGATGTATACACAGATCT+TGG 0.385985 4_3:+68846951 None:intergenic
ACAAGCTTGGTGAAGAAATC+TGG 0.391646 4_3:+68847243 None:intergenic
ATTGCAGGAAGTGGCTTAGC+TGG 0.400192 4_3:-68844582 Msa0658640:intron
AAACGTTTATGTCCCCTCTA+AGG 0.400315 4_3:+68847118 None:intergenic
CAAGCAGCATCAGAAGCTGC+TGG 0.400775 4_3:-68844312 Msa0658640:CDS
GTTGCCAAGGAACCAGAAAC+TGG 0.401643 4_3:-68846894 Msa0658640:CDS
TTCCACCGGCTATACTTTCA+AGG 0.402725 4_3:-68845842 Msa0658640:CDS
GGCCATTGCAAGGTGTCATC+TGG 0.403603 4_3:-68845436 Msa0658640:CDS
TGCCTGCAAGAGGTTTGTTA+TGG 0.403641 4_3:-68848808 Msa0658640:CDS
CTGTTGTTACATGTAGCATT+TGG 0.405390 4_3:+68848257 None:intergenic
GATTTAACAGGCTCAGGAAC+TGG 0.406162 4_3:-68847292 Msa0658640:intron
CCAAGATCTGTGTATACATC+TGG 0.406994 4_3:-68846951 Msa0658640:CDS
CTAGTAGTGATGAAAGAGTT+TGG 0.407626 4_3:-68844212 Msa0658640:three_prime_UTR
CCAAATTAAAGCAATTATAG+AGG 0.410633 4_3:-68844466 Msa0658640:intron
CAAACTCTTTCATCACTACT+AGG 0.412297 4_3:+68844213 None:intergenic
AAGAGAGCAAATTTACTGAT+TGG 0.413990 4_3:-68848211 Msa0658640:CDS
TTGCAGGCATTCTGCAAGTA+AGG 0.418482 4_3:+68848822 None:intergenic
GAAGCCAACGCCAATATATC+AGG 0.418612 4_3:+68847932 None:intergenic
CTAGACACTTGAAAGTTCCT+TGG 0.427198 4_3:+68848461 None:intergenic
CGACATTCTGATCTCTCTCC+AGG 0.428347 4_3:+68847908 None:intergenic
GGAAAGTCATCATCTGCTGC+TGG 0.432241 4_3:-68846930 Msa0658640:CDS
CAACGTTGATATCCTTGTTA+GGG 0.439564 4_3:+68848754 None:intergenic
AAGGTGTCATCTGGATAATC+AGG 0.447002 4_3:-68845427 Msa0658640:intron
AAGACGCATGACAAGGGCCT+TGG 0.449057 4_3:+68844877 None:intergenic
TGAAGGTGTGAGGGGCCTTA+GGG 0.453292 4_3:-68847846 Msa0658640:CDS
AAAATCAATGAACATGGTGT+TGG 0.455706 4_3:+68849014 None:intergenic
TTGCATATCGGATGACAGTT+AGG 0.457504 4_3:-68845488 Msa0658640:CDS
TGGATCACCAGTTTCAGATC+TGG 0.457654 4_3:-68849093 Msa0658640:intron
ATATTGGCGTTGGCTTCCCC+TGG 0.469082 4_3:-68847926 Msa0658640:CDS
AGCTACACTTTCAACAAGCT+TGG 0.470042 4_3:+68847230 None:intergenic
GTAGCATTTGGACAAATTGT+TGG 0.476872 4_3:+68848269 None:intergenic
AAAGTTCCTTGGAGAAGCTC+AGG 0.479407 4_3:+68848472 None:intergenic
TTATCATACCGTCCTCCAGC+AGG 0.479460 4_3:+68845982 None:intergenic
CGTAGAGCTGATACAAATCC+TGG 0.483403 4_3:-68845519 Msa0658640:CDS
TGAGTTTCAAGATCAAGATA+TGG 0.484842 4_3:-68845146 Msa0658640:CDS
GAACATGTTATTACCTTCAG+TGG 0.489503 4_3:+68845952 None:intergenic
AGGGTTGGCAGCGGCAAGAA+TGG 0.489803 4_3:+68846002 None:intergenic
AGCTGGAAACTCTACTGCTC+AGG 0.490744 4_3:-68845071 Msa0658640:CDS
CTATCTCTGATGAATATTTG+AGG 0.491103 4_3:-68848954 Msa0658640:intron
TCCTTCTTATGCTAATGAGT+GGG 0.491510 4_3:-68847170 Msa0658640:CDS
CCAATATTGCAGCAACTTGG+TGG 0.493219 4_3:-68844168 Msa0658640:three_prime_UTR
TGGCTACATCAGAGATTGGT+AGG 0.504042 4_3:-68848540 Msa0658640:CDS
TCAAGTGTCTAGAATGTGGT+GGG 0.506639 4_3:-68848450 Msa0658640:CDS
GTAGAAGAGAAATAGACATC+AGG 0.506918 4_3:-68847669 Msa0658640:CDS
CAAGATGGACATAAGAGATC+AGG 0.507764 4_3:-68846182 Msa0658640:intron
AACGATGCTGATGGTCAAGC+TGG 0.508931 4_3:-68845088 Msa0658640:CDS
CTGATACAAATCCTGGCAGT+AGG 0.511503 4_3:-68845512 Msa0658640:CDS
CTGGCAGTAGGGTTGCATAT+CGG 0.513097 4_3:-68845500 Msa0658640:CDS
ATGAGATTGTAGAACATGCT+AGG 0.515340 4_3:-68848109 Msa0658640:CDS
GTCAGCAAGCATCAAAGCGC+CGG 0.518628 4_3:+68846234 None:intergenic
CCCCACTCATTAGCATAAGA+AGG 0.518823 4_3:+68847169 None:intergenic
GTCCCAATATTGCAGCAACT+TGG 0.520031 4_3:-68844171 Msa0658640:three_prime_UTR
CAAGATATGGACGAAGAAGC+AGG 0.521607 4_3:-68845133 Msa0658640:CDS
GTCAGATGCAAGAAAACTAC+TGG 0.521796 4_3:-68845562 Msa0658640:CDS
TCCTCCAGCAGGGTTGGCAG+CGG 0.522459 4_3:+68845993 None:intergenic
ACTATTAGTATCACAAAAGC+AGG 0.523615 4_3:-68846054 Msa0658640:CDS
CAAATTTACTGATTGGCAAA+GGG 0.525128 4_3:-68848204 Msa0658640:CDS
TAATTACAGTTCCGTGGAGG+AGG 0.526353 4_3:-68844505 Msa0658640:CDS
CTTAGCTGGGATGAAGCAAC+GGG 0.528915 4_3:-68844568 Msa0658640:CDS
GCAAATTTACTGATTGGCAA+AGG 0.529371 4_3:-68848205 Msa0658640:CDS
AGAGCCAGCAGGTATCTCAT+TGG 0.529743 4_3:+68848163 None:intergenic
CATACCTGATATATTGGCGT+TGG 0.531733 4_3:-68847936 Msa0658640:CDS
GAATTGGCTACATCAGAGAT+TGG 0.532287 4_3:-68848544 Msa0658640:CDS
CATTGATGAATTTGACAAGA+TGG 0.532365 4_3:-68846197 Msa0658640:CDS
GGTTGCAATTCATGAGGCTA+TGG 0.533064 4_3:-68846085 Msa0658640:CDS
GGTGCTTCATCTGGGAATGA+AGG 0.533732 4_3:-68847863 Msa0658640:CDS
ATCTGGGAATGAAGGTGTGA+GGG 0.535862 4_3:-68847855 Msa0658640:CDS
TGCTAGAAATGATAGAACTT+TGG 0.535930 4_3:-68844268 Msa0658640:CDS
GCTTTGATGCTTGCTGACAA+TGG 0.535963 4_3:-68846229 Msa0658640:CDS
GAAAGTCATCATCTGCTGCT+GGG 0.536220 4_3:-68846929 Msa0658640:CDS
CGATATGCAACCCTACTGCC+AGG 0.536524 4_3:+68845501 None:intergenic
TTGGCAAAGGGTCAGAATGC+AGG 0.537253 4_3:-68848192 Msa0658640:CDS
GCCGCTGCCAACCCTGCTGG+AGG 0.537734 4_3:-68845994 Msa0658640:CDS
TACCTGCTGGCTCTCTGCCT+AGG 0.538550 4_3:-68848154 Msa0658640:CDS
CAGGAAGCCGCTGGAACCAA+TGG 0.541233 4_3:-68845052 Msa0658640:intron
CTCTGACTCCCAAAGCCCTA+AGG 0.541676 4_3:+68847831 None:intergenic
GTACAATGTGGCTCTTCCAC+CGG 0.541952 4_3:-68845856 Msa0658640:CDS
AACGCAAGGGTGCTTCATCT+GGG 0.544757 4_3:-68847871 Msa0658640:CDS
AGACATCAGGAATAGAAAGA+AGG 0.549012 4_3:-68847656 Msa0658640:CDS
TAGGGAAGCTTCTCAACGCA+AGG 0.550312 4_3:-68847885 Msa0658640:CDS
ATGAAGGCATCAGCCTTAGA+GGG 0.551495 4_3:-68847131 Msa0658640:CDS
CTGCCAACCCTGCTGGAGGA+CGG 0.553709 4_3:-68845990 Msa0658640:CDS
TGGATGAAGTTCAAAGAATG+AGG 0.554379 4_3:-68847272 Msa0658640:CDS
ACTGAAAAGTTTGATGATGT+TGG 0.559671 4_3:-68844073 Msa0658640:three_prime_UTR
AGTTCTGCTGTAGTGAACGT+TGG 0.559838 4_3:+68845714 None:intergenic
TTCAACTTTCGCCTCCTCCA+CGG 0.560026 4_3:+68844494 None:intergenic
TGATCGTGATAGATGATGGC+AGG 0.560237 4_3:-68844335 Msa0658640:CDS
GAGAGAGATCAGAATGTCGT+AGG 0.562049 4_3:-68847904 Msa0658640:CDS
TTGCAGGAAGTGGCTTAGCT+GGG 0.562532 4_3:-68844581 Msa0658640:intron
TCGGATGACAGTTAGGCAGT+TGG 0.563427 4_3:-68845481 Msa0658640:CDS
CAGGATTTGTATCAGCTCTA+CGG 0.565166 4_3:+68845520 None:intergenic
AAGTGAAAATGATTAACTAC+AGG 0.565779 4_3:+68843928 None:intergenic
AATTGAGACTTTGCACAGCT+AGG 0.566095 4_3:+68847081 None:intergenic
TTCTTTGTTTCAGTACAATG+TGG 0.566629 4_3:-68845868 Msa0658640:intron
CATTTGATCGTGATAGATGA+TGG 0.566869 4_3:-68844339 Msa0658640:CDS
ACTTGCAGAATGCCTGCAAG+AGG 0.569621 4_3:-68848818 Msa0658640:CDS
CTGTAACAGGAGTGGTAACA+AGG 0.572546 4_3:-68848510 Msa0658640:CDS
TCAAACCTTGAAAGTATAGC+CGG 0.573082 4_3:+68845837 None:intergenic
GACCTAGGCAGAGAGCCAGC+AGG 0.575423 4_3:+68848152 None:intergenic
GGAAGCTTTAATCAGGCTGT+CGG 0.576059 4_3:-68845460 Msa0658640:CDS
TAACTGATGAATACTTTCAA+AGG 0.576649 4_3:-68844904 Msa0658640:CDS
GCTTAGCTGGGATGAAGCAA+CGG 0.577228 4_3:-68844569 Msa0658640:CDS
ATACCGTCCTCCAGCAGGGT+TGG 0.577304 4_3:+68845987 None:intergenic
TATTATTGTCTTCATTTACA+GGG 0.578919 4_3:-68844019 Msa0658640:three_prime_UTR
GGTTTGTTCCAGATTTGTGA+TGG 0.579414 4_3:-68847691 Msa0658640:intron
AGAGAGATCAGAATGTCGTA+GGG 0.583410 4_3:-68847903 Msa0658640:CDS
GACATTCTGATCTCTCTCCA+GGG 0.583538 4_3:+68847909 None:intergenic
TGATAAGTCTAAACCACTGA+AGG 0.585685 4_3:-68845965 Msa0658640:intron
ATAACATTCCAATTGTCAAG+AGG 0.586980 4_3:-68848725 Msa0658640:intron
ATTTAAGAGTTGAACGATGT+CGG 0.588280 4_3:-68843989 Msa0658640:three_prime_UTR
CACCTCACCATTGGTTCCAG+CGG 0.588414 4_3:+68845045 None:intergenic
TAAAAGCAAGTCGGTAGGAG+AGG 0.589366 4_3:+68847807 None:intergenic
ACGTCCAATGAGATACCTGC+TGG 0.590348 4_3:-68848167 Msa0658640:CDS
CCTTCTTATGCTAATGAGTG+GGG 0.592758 4_3:-68847169 Msa0658640:CDS
ATGTAACAACAGAGCAAAGT+GGG 0.595789 4_3:-68848246 Msa0658640:CDS
ATAACGAACCTGAACAGAGT+TGG 0.596640 4_3:+68847781 None:intergenic
TCTACTGCTCAGGAAGCCGC+TGG 0.597751 4_3:-68845061 Msa0658640:CDS
GGCTGTCGGAGGCCATTGCA+AGG 0.600168 4_3:-68845446 Msa0658640:CDS
AAATGATAGAACTTTGGCTG+TGG 0.600445 4_3:-68844262 Msa0658640:CDS
TGATACAAATCCTGGCAGTA+GGG 0.600996 4_3:-68845511 Msa0658640:CDS
GTTCACAAATCTACTCATGA+AGG 0.603800 4_3:-68847147 Msa0658640:CDS
TGAGATTGTAGAACATGCTA+GGG 0.603809 4_3:-68848108 Msa0658640:CDS
GTTCGACCTGAGCTTCTCCA+AGG 0.607207 4_3:-68848478 Msa0658640:CDS
CATCTGGGAATGAAGGTGTG+AGG 0.608451 4_3:-68847856 Msa0658640:CDS
ATCCAGATGACACCTTGCAA+TGG 0.610507 4_3:+68845434 None:intergenic
AAGCTTGCAGCTCAAGACAA+AGG 0.610528 4_3:+68844142 None:intergenic
ATTGTAGAACATGCTAGGGC+TGG 0.615899 4_3:-68848104 Msa0658640:CDS
TTCAAGTGTCTAGAATGTGG+TGG 0.616955 4_3:-68848451 Msa0658640:CDS
GCTGTCTAAGACGCATGACA+AGG 0.617928 4_3:+68844870 None:intergenic
AGCTTTAATCAGGCTGTCGG+AGG 0.618052 4_3:-68845457 Msa0658640:CDS
ATCCTTCTTATGCTAATGAG+TGG 0.618694 4_3:-68847171 Msa0658640:CDS
ATTGAAGGTTGCAATTCATG+AGG 0.621895 4_3:-68846091 Msa0658640:intron
GTTGACTGCAACTGTTGCCA+AGG 0.630299 4_3:-68846907 Msa0658640:CDS
GGTAATCTGTAACATCGTCT+GGG 0.631041 4_3:+68845790 None:intergenic
GGCAATAAAAGCAAGTCGGT+AGG 0.631539 4_3:+68847802 None:intergenic
GAGGAGACCGTAATGCAAGA+AGG 0.631602 4_3:-68844845 Msa0658640:intron
AATGATAATAACGATGCTGA+TGG 0.632424 4_3:-68845097 Msa0658640:CDS
AGAATAACATCCAATGACCT+AGG 0.632771 4_3:+68848137 None:intergenic
ACTGCTAAACGAACATGACG+AGG 0.634306 4_3:+68845311 None:intergenic
GAATGAACTTTATTACGAAG+CGG 0.634597 4_3:-68849064 Msa0658640:five_prime_UTR
CAAGTGTCTAGAATGTGGTG+GGG 0.638582 4_3:-68848449 Msa0658640:CDS
GAAGAAGCAGGTAGTGACGA+TGG 0.642853 4_3:-68845121 Msa0658640:CDS
TCTGGGAATGAAGGTGTGAG+GGG 0.644966 4_3:-68847854 Msa0658640:CDS
CTGTCTAAGACGCATGACAA+GGG 0.646104 4_3:+68844871 None:intergenic
ATGTTCAAAATCAATGAACA+TGG 0.646880 4_3:+68849008 None:intergenic
CCAGTTTCAGATCTGGACAA+AGG 0.648235 4_3:-68849086 Msa0658640:intron
TTATCATCAGAAATGAATGT+CGG 0.648409 4_3:+68848777 None:intergenic
AACCTTGAAAGTATAGCCGG+TGG 0.648631 4_3:+68845840 None:intergenic
GCTTGTATCTGTAACAGGAG+TGG 0.649403 4_3:-68848518 Msa0658640:CDS
AGGGAAGCTTCTCAACGCAA+GGG 0.651545 4_3:-68847884 Msa0658640:CDS
ACTTTCAAGTGTCTAGAATG+TGG 0.654394 4_3:-68848454 Msa0658640:CDS
TATCATACCGTCCTCCAGCA+GGG 0.656611 4_3:+68845983 None:intergenic
ATTGGGACGGCGAAACAAAG+TGG 0.656734 4_3:+68844186 None:intergenic
AAGTTGCTGCAATATTGGGA+CGG 0.658779 4_3:+68844173 None:intergenic
GCACAATATGAGAAGCTATG+TGG 0.660506 4_3:+68845769 None:intergenic
TTCTGATGATAACCCTAACA+AGG 0.660674 4_3:-68848766 Msa0658640:CDS
TGAAGGCATCAGCCTTAGAG+GGG 0.664188 4_3:-68847130 Msa0658640:CDS
CATGCGTCTTAGACAGCACG+AGG 0.667096 4_3:-68844864 Msa0658640:CDS
CATGTAACAACAGAGCAAAG+TGG 0.668775 4_3:-68848247 Msa0658640:CDS
AGTGGTAACAAGGACAAGTG+AGG 0.673592 4_3:-68848500 Msa0658640:CDS
AGTTGGCAATAAAAGCAAGT+CGG 0.673960 4_3:+68847798 None:intergenic
ACATTCTGATCTCTCTCCAG+GGG 0.682522 4_3:+68847910 None:intergenic
AAATAATTACAGTTCCGTGG+AGG 0.693918 4_3:-68844508 Msa0658640:CDS
ACAGCAATTCAAGTATACTG+AGG 0.742350 4_3:-68848410 Msa0658640:intron
ATACTTTCAAAGGATCACCA+AGG 0.772896 4_3:-68844894 Msa0658640:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGTTTTAAATTTCTATTT+TGG - chr4_3:68847878-68847897 Msa0658640:CDS 10.0%
!!! TTGTTTTAAATTTCTATTTT+GGG - chr4_3:68847879-68847898 Msa0658640:CDS 10.0%
!!! TTAAATTCTAAAATTTATTC+AGG - chr4_3:68848384-68848403 Msa0658640:intron 10.0%
!! AAAGAAATTAGTATATTTAT+TGG - chr4_3:68848703-68848722 Msa0658640:intron 10.0%
!! AATTTCAATAAAAATCCAAT+TGG + chr4_3:68844203-68844222 None:intergenic 15.0%
!!! CAAAATAATACCAAATTTTA+GGG + chr4_3:68844233-68844252 None:intergenic 15.0%
!!! CTAAAATTTGGTATTATTTT+GGG - chr4_3:68844232-68844251 Msa0658640:exon 15.0%
!!! TTATTCATAATTTAAGACTA+CGG + chr4_3:68844768-68844787 None:intergenic 15.0%
!! GTCTTAAATTATGAATAATA+CGG - chr4_3:68844770-68844789 Msa0658640:intron 15.0%
!! AATAGATTGATAAATATTAG+GGG + chr4_3:68845691-68845710 None:intergenic 15.0%
!! CAATAGATTGATAAATATTA+GGG + chr4_3:68845692-68845711 None:intergenic 15.0%
!!! TTTTATGCTATACTTTATAT+CGG + chr4_3:68846711-68846730 None:intergenic 15.0%
!! ATAAAATTTACTTATTCACT+GGG - chr4_3:68848134-68848153 Msa0658640:CDS 15.0%
!! TTTATATAAACAAATCTCAA+AGG + chr4_3:68848443-68848462 None:intergenic 15.0%
!! TTGTTTATATAAAACAATGT+CGG - chr4_3:68848450-68848469 Msa0658640:CDS 15.0%
!! AAATATACTAATTTCTTTGA+AGG + chr4_3:68848701-68848720 None:intergenic 15.0%
!! TATTAATCAACAACATAATT+AGG + chr4_3:68848887-68848906 None:intergenic 15.0%
!!! TAATTGTTTCTGTTTTGTTT+TGG - chr4_3:68844008-68844027 Msa0658640:three_prime_UTR 20.0%
!!! CCAAAATAATACCAAATTTT+AGG + chr4_3:68844234-68844253 None:intergenic 20.0%
!!! CCTAAAATTTGGTATTATTT+TGG - chr4_3:68844231-68844250 Msa0658640:exon 20.0%
!!! GTATTTTAATTTGCAAATTG+AGG - chr4_3:68844471-68844490 Msa0658640:CDS 20.0%
!!! TATTCATAATTTAAGACTAC+GGG + chr4_3:68844767-68844786 None:intergenic 20.0%
!! AATGTAAACTTTATGGAATT+TGG - chr4_3:68845096-68845115 Msa0658640:CDS 20.0%
!!! TGATAAATATGTTTTCTGTA+TGG - chr4_3:68845409-68845428 Msa0658640:intron 20.0%
!! ATAGATTGATAAATATTAGG+GGG + chr4_3:68845690-68845709 None:intergenic 20.0%
!! GCAATAGATTGATAAATATT+AGG + chr4_3:68845693-68845712 None:intergenic 20.0%
!! ATTTGATAAAGCACAATAAT+AGG - chr4_3:68846497-68846516 Msa0658640:intron 20.0%
!! GATAAAATTTACTTATTCAC+TGG - chr4_3:68848133-68848152 Msa0658640:CDS 20.0%
!!! TACAGTAGATTTTTTTCTTT+GGG + chr4_3:68848199-68848218 None:intergenic 20.0%
!!! TTACAGTAGATTTTTTTCTT+TGG + chr4_3:68848200-68848219 None:intergenic 20.0%
!!! AATTATTTTTCTCATTTTGC+TGG + chr4_3:68848601-68848620 None:intergenic 20.0%
!!! CTCTATAATTGCTTTAATTT+GGG + chr4_3:68848657-68848676 None:intergenic 20.0%
!! ATATTATTGTCTTCATTTAC+AGG - chr4_3:68849101-68849120 Msa0658640:intron 20.0%
!! TATTATTGTCTTCATTTACA+GGG - chr4_3:68849102-68849121 Msa0658640:intron 20.0%
!!! ACAAGATTGATTAGTTAAAT+TGG + chr4_3:68849248-68849267 None:intergenic 20.0%
!! CTTTCTTAGATTTTCTCAAA+AGG - chr4_3:68843896-68843915 Msa0658640:three_prime_UTR 25.0%
! ATGTTCAAAATCAATGAACA+TGG + chr4_3:68844116-68844135 None:intergenic 25.0%
!!! TGAGGTATTTTTTTTCCAAT+TGG - chr4_3:68844185-68844204 Msa0658640:three_prime_UTR 25.0%
! ATTACTGAAACCCTAAAATT+TGG - chr4_3:68844220-68844239 Msa0658640:exon 25.0%
! TTATCATCAGAAATGAATGT+CGG + chr4_3:68844347-68844366 None:intergenic 25.0%
! TAACGAAATGAAAACGAAAT+TGG + chr4_3:68844438-68844457 None:intergenic 25.0%
! TTGAAAAGTTAAAGCAGATT+CGG + chr4_3:68845066-68845085 None:intergenic 25.0%
! GTACTGAAATGTAAACTTTA+TGG - chr4_3:68845089-68845108 Msa0658640:CDS 25.0%
! AATTGTCATACCTGATATAT+TGG - chr4_3:68845179-68845198 Msa0658640:intron 25.0%
! AATGTGAACTCAAAATCAAA+CGG + chr4_3:68845557-68845576 None:intergenic 25.0%
!!! GGCTTTAATCTACATATTTT+AGG - chr4_3:68845642-68845661 Msa0658640:intron 25.0%
! AAAGAAAAATGAACAGGTTA+AGG + chr4_3:68845719-68845738 None:intergenic 25.0%
! TGTGTTAAAGAAAAATGAAC+AGG + chr4_3:68845725-68845744 None:intergenic 25.0%
! GTAATCAAAGAAAAAGAGAA+AGG + chr4_3:68846079-68846098 None:intergenic 25.0%
! AATTTAAATTTGCCAAACCA+AGG + chr4_3:68846414-68846433 None:intergenic 25.0%
!!! TTGGTTTGGCAAATTTAAAT+TGG - chr4_3:68846413-68846432 Msa0658640:intron 25.0%
! GTTAAGAATTAAGTTAGAGT+AGG - chr4_3:68846593-68846612 Msa0658640:intron 25.0%
! TTTATCAAACATGAATTGAG+AGG - chr4_3:68846735-68846754 Msa0658640:intron 25.0%
! AAAGATGAATTCAAAACAAG+TGG - chr4_3:68846775-68846794 Msa0658640:intron 25.0%
! AAGATGAATTCAAAACAAGT+GGG - chr4_3:68846776-68846795 Msa0658640:intron 25.0%
!!! TTATGTAAGAACTTGTTTTC+AGG - chr4_3:68846864-68846883 Msa0658640:intron 25.0%
!!! ATTTTTTTACTGGCATTTGA+GGG - chr4_3:68846974-68846993 Msa0658640:intron 25.0%
!!! GAAAGTATCTCATATTTGAT+TGG - chr4_3:68847007-68847026 Msa0658640:intron 25.0%
! CAATAAGGTAATTAATAACC+AGG + chr4_3:68847201-68847220 None:intergenic 25.0%
! TTACCTTATTGAGTTTAACT+TGG - chr4_3:68847210-68847229 Msa0658640:CDS 25.0%
! ATTGTACTGAAACAAAGAAA+GGG + chr4_3:68847252-68847271 None:intergenic 25.0%
!!! TTGAACACTGCTTTTTATTT+TGG - chr4_3:68847472-68847491 Msa0658640:intron 25.0%
! TAAGTAAGAAAGAAGCAAAA+AGG + chr4_3:68847519-68847538 None:intergenic 25.0%
!! CGATTTTCTGATTTTATAAC+AGG - chr4_3:68847782-68847801 Msa0658640:intron 25.0%
!!! ACAGTAGATTTTTTTCTTTG+GGG + chr4_3:68848198-68848217 None:intergenic 25.0%
! TAACTGATGAATACTTTCAA+AGG - chr4_3:68848217-68848236 Msa0658640:CDS 25.0%
!! ATTGAAAGTTGAATTTTCTG+TGG - chr4_3:68848508-68848527 Msa0658640:CDS 25.0%
!! TTGAAAGTTGAATTTTCTGT+GGG - chr4_3:68848509-68848528 Msa0658640:CDS 25.0%
! CCTCTATAATTGCTTTAATT+TGG + chr4_3:68848658-68848677 None:intergenic 25.0%
! CCAAATTAAAGCAATTATAG+AGG - chr4_3:68848655-68848674 Msa0658640:intron 25.0%
!!! TAGATTTTAATTCGAAGAGA+GGG - chr4_3:68848758-68848777 Msa0658640:CDS 25.0%
!! TTTTCAGTAGTAAACTGAAT+TGG + chr4_3:68849036-68849055 None:intergenic 25.0%
! AAGTGAAAATGATTAACTAC+AGG + chr4_3:68849196-68849215 None:intergenic 25.0%
!!! AAACGATTTTAGTATAGAAC+AGG - chr4_3:68849218-68849237 Msa0658640:intron 25.0%
GAATGAACTTTATTACGAAG+CGG - chr4_3:68844057-68844076 Msa0658640:three_prime_UTR 30.0%
AAAATCAATGAACATGGTGT+TGG + chr4_3:68844110-68844129 None:intergenic 30.0%
CTATCTCTGATGAATATTTG+AGG - chr4_3:68844167-68844186 Msa0658640:three_prime_UTR 30.0%
!! TTTGTGTTGTTGTTGATGAT+AGG - chr4_3:68844270-68844289 Msa0658640:CDS 30.0%
GACAATTGGAATGTTATAGA+AGG + chr4_3:68844393-68844412 None:intergenic 30.0%
ATAACATTCCAATTGTCAAG+AGG - chr4_3:68844396-68844415 Msa0658640:intron 30.0%
TGAATATACCTCTTGACAAT+TGG + chr4_3:68844407-68844426 None:intergenic 30.0%
! TAATTTGCAAATTGAGGCTT+TGG - chr4_3:68844477-68844496 Msa0658640:CDS 30.0%
!! TCTGTGTTCGATGTTTTTAT+AGG - chr4_3:68844548-68844567 Msa0658640:CDS 30.0%
!! TTCGATGTTTTTATAGGCTA+AGG - chr4_3:68844554-68844573 Msa0658640:CDS 30.0%
!! TCGATGTTTTTATAGGCTAA+GGG - chr4_3:68844555-68844574 Msa0658640:CDS 30.0%
! TTTTTATAGGCTAAGGGAAT+TGG - chr4_3:68844561-68844580 Msa0658640:CDS 30.0%
! AATCAGTAAATTTGCTCTCT+TGG + chr4_3:68844911-68844930 None:intergenic 30.0%
AAGAGAGCAAATTTACTGAT+TGG - chr4_3:68844910-68844929 Msa0658640:CDS 30.0%
! CAAATTTACTGATTGGCAAA+GGG - chr4_3:68844917-68844936 Msa0658640:CDS 30.0%
TGAAAAGTTAAAGCAGATTC+GGG + chr4_3:68845065-68845084 None:intergenic 30.0%
AATATTAGGGGGAAATAACA+GGG + chr4_3:68845679-68845698 None:intergenic 30.0%
AAATATTAGGGGGAAATAAC+AGG + chr4_3:68845680-68845699 None:intergenic 30.0%
! ATTTGACTGGTTGATTTAAC+AGG - chr4_3:68845817-68845836 Msa0658640:CDS 30.0%
! TCTTGATGACCAAAAATAGT+TGG + chr4_3:68845917-68845936 None:intergenic 30.0%
GACATAAACGTTTGTATTGT+TGG - chr4_3:68846013-68846032 Msa0658640:CDS 30.0%
TTCTTTGATTACTTTCATGC+TGG - chr4_3:68846087-68846106 Msa0658640:CDS 30.0%
TCATGTATGGTTATCATTTC+AGG - chr4_3:68846129-68846148 Msa0658640:intron 30.0%
TTCATTTGTGTTTGTATCCT+TGG - chr4_3:68846394-68846413 Msa0658640:intron 30.0%
! AGTTGAATCTGGTTTAAACT+AGG + chr4_3:68846455-68846474 None:intergenic 30.0%
! AATAGGATTAGAGTTGCTTT+AGG - chr4_3:68846514-68846533 Msa0658640:intron 30.0%
! TTAGGTTTAAAATTACTGCC+TGG - chr4_3:68846532-68846551 Msa0658640:intron 30.0%
!!! TCATTGATTCACTATTTTCC+AGG + chr4_3:68846553-68846572 None:intergenic 30.0%
! ATTACAACTCGCAAACATTT+TGG + chr4_3:68846668-68846687 None:intergenic 30.0%
!! ACTTTATATCGGTTTCTGAA+TGG + chr4_3:68846700-68846719 None:intergenic 30.0%
TCAAGCACTTTATCATTATC+TGG - chr4_3:68846810-68846829 Msa0658640:intron 30.0%
CATTGATGAATTTGACAAGA+TGG - chr4_3:68846924-68846943 Msa0658640:CDS 30.0%
!!! CATTTTTTTACTGGCATTTG+AGG - chr4_3:68846973-68846992 Msa0658640:CDS 30.0%
CTCATATTTGATTGGATTGA+AGG - chr4_3:68847015-68847034 Msa0658640:intron 30.0%
ACTATTAGTATCACAAAAGC+AGG - chr4_3:68847067-68847086 Msa0658640:intron 30.0%
GAAAGGGCAAAAACTAAATT+AGG + chr4_3:68847236-68847255 None:intergenic 30.0%
CATTGTACTGAAACAAAGAA+AGG + chr4_3:68847253-68847272 None:intergenic 30.0%
! TTCTTTGTTTCAGTACAATG+TGG - chr4_3:68847253-68847272 Msa0658640:CDS 30.0%
! TGGTTTAAGAGTTTTTGCAT+AGG + chr4_3:68847447-68847466 None:intergenic 30.0%
TGCAAAAACTCTTAAACCAA+AGG - chr4_3:68847448-68847467 Msa0658640:intron 30.0%
! CAGGTGTTTAATGATTTTAG+AGG - chr4_3:68847713-68847732 Msa0658640:intron 30.0%
!! TGTTTAATGATTTTAGAGGC+TGG - chr4_3:68847717-68847736 Msa0658640:intron 30.0%
! TTGTATATGTTTTCCTTAGC+TGG - chr4_3:68847751-68847770 Msa0658640:intron 30.0%
TGCTGCAAACTTCTATAATA+AGG - chr4_3:68847838-68847857 Msa0658640:CDS 30.0%
GCAAACTTCTATAATAAGGT+AGG - chr4_3:68847842-68847861 Msa0658640:CDS 30.0%
TGAGTTTCAAGATCAAGATA+TGG - chr4_3:68847975-68847994 Msa0658640:intron 30.0%
AATGATAATAACGATGCTGA+TGG - chr4_3:68848024-68848043 Msa0658640:intron 30.0%
!!! CAGTAGATTTTTTTCTTTGG+GGG + chr4_3:68848197-68848216 None:intergenic 30.0%
GTTAAAACCTTCTTGCATTA+CGG + chr4_3:68848286-68848305 None:intergenic 30.0%
CAACTTTCAATATGATCACA+TGG + chr4_3:68848499-68848518 None:intergenic 30.0%
GAAAAATAATTACAGTTCCG+TGG - chr4_3:68848610-68848629 Msa0658640:intron 30.0%
!!! GTAGATTTTAATTCGAAGAG+AGG - chr4_3:68848757-68848776 Msa0658640:CDS 30.0%
!!! AGATTTTAATTCGAAGAGAG+GGG - chr4_3:68848759-68848778 Msa0658640:CDS 30.0%
TGCTAGAAATGATAGAACTT+TGG - chr4_3:68848853-68848872 Msa0658640:intron 30.0%
!! ACTGAAAAGTTTGATGATGT+TGG - chr4_3:68849048-68849067 Msa0658640:exon 30.0%
ATTTAAGAGTTGAACGATGT+CGG - chr4_3:68849132-68849151 Msa0658640:intron 30.0%
TTCTGATGATAACCCTAACA+AGG - chr4_3:68844355-68844374 Msa0658640:CDS 35.0%
CAACGTTGATATCCTTGTTA+GGG + chr4_3:68844370-68844389 None:intergenic 35.0%
! ACTTTCAAGTGTCTAGAATG+TGG - chr4_3:68844667-68844686 Msa0658640:intron 35.0%
ACAGCAATTCAAGTATACTG+AGG - chr4_3:68844711-68844730 Msa0658640:intron 35.0%
GTAGCATTTGGACAAATTGT+TGG + chr4_3:68844855-68844874 None:intergenic 35.0%
CTGTTGTTACATGTAGCATT+TGG + chr4_3:68844867-68844886 None:intergenic 35.0%
ATGTAACAACAGAGCAAAGT+GGG - chr4_3:68844875-68844894 Msa0658640:CDS 35.0%
! GCAAATTTACTGATTGGCAA+AGG - chr4_3:68844916-68844935 Msa0658640:CDS 35.0%
AGAATAACATCCAATGACCT+AGG + chr4_3:68844987-68845006 None:intergenic 35.0%
ATGAGATTGTAGAACATGCT+AGG - chr4_3:68845012-68845031 Msa0658640:intron 35.0%
TGAGATTGTAGAACATGCTA+GGG - chr4_3:68845013-68845032 Msa0658640:intron 35.0%
GAAAAGTTAAAGCAGATTCG+GGG + chr4_3:68845064-68845083 None:intergenic 35.0%
GTAAAAATCACCCTGCAAAT+TGG + chr4_3:68845150-68845169 None:intergenic 35.0%
! ATTTGCAGGGTGATTTTTAC+TGG - chr4_3:68845150-68845169 Msa0658640:CDS 35.0%
AGTTGGCAATAAAAGCAAGT+CGG + chr4_3:68845326-68845345 None:intergenic 35.0%
! TTTTATTGCCAACTCTGTTC+AGG - chr4_3:68845332-68845351 Msa0658640:intron 35.0%
GTAGAAGAGAAATAGACATC+AGG - chr4_3:68845452-68845471 Msa0658640:CDS 35.0%
AGACATCAGGAATAGAAAGA+AGG - chr4_3:68845465-68845484 Msa0658640:CDS 35.0%
ATCTGCAATTCACTGTAAGT+TGG - chr4_3:68845503-68845522 Msa0658640:CDS 35.0%
TGACCAACACTATATTTGAC+TGG - chr4_3:68845804-68845823 Msa0658640:CDS 35.0%
CAACCAGTCAAATATAGTGT+TGG + chr4_3:68845810-68845829 None:intergenic 35.0%
TGGATGAAGTTCAAAGAATG+AGG - chr4_3:68845849-68845868 Msa0658640:CDS 35.0%
! AGTGTAGCTCCAACTATTTT+TGG - chr4_3:68845905-68845924 Msa0658640:intron 35.0%
ATCCTTCTTATGCTAATGAG+TGG - chr4_3:68845950-68845969 Msa0658640:intron 35.0%
TCCTTCTTATGCTAATGAGT+GGG - chr4_3:68845951-68845970 Msa0658640:intron 35.0%
GTTCACAAATCTACTCATGA+AGG - chr4_3:68845974-68845993 Msa0658640:CDS 35.0%
CGAATTGAATGGATCATGTA+TGG - chr4_3:68846116-68846135 Msa0658640:intron 35.0%
ATACAAAACTCTCCAGTTTC+TGG + chr4_3:68846242-68846261 None:intergenic 35.0%
!! AACTGGAGAGTTTTGTATTG+AGG - chr4_3:68846244-68846263 Msa0658640:intron 35.0%
CTTCCACTAATACAAAAGAG+CGG + chr4_3:68846281-68846300 None:intergenic 35.0%
TTGTGTTTGTATCCTTGGTT+TGG - chr4_3:68846399-68846418 Msa0658640:intron 35.0%
ACAGTAGAACTAGTTGAATC+TGG + chr4_3:68846466-68846485 None:intergenic 35.0%
AATGCTTAGTTCAGAATCCA+TGG + chr4_3:68846645-68846664 None:intergenic 35.0%
AATTCATCTTTACCGAACTC+AGG + chr4_3:68846766-68846785 None:intergenic 35.0%
!!! AGAGGCATGCATTTTTTTAC+TGG - chr4_3:68846964-68846983 Msa0658640:CDS 35.0%
ATTGAAGGTTGCAATTCATG+AGG - chr4_3:68847030-68847049 Msa0658640:intron 35.0%
TGATAAGTCTAAACCACTGA+AGG - chr4_3:68847156-68847175 Msa0658640:CDS 35.0%
GAACATGTTATTACCTTCAG+TGG + chr4_3:68847172-68847191 None:intergenic 35.0%
AATAACATGTTCTGCTAACC+TGG - chr4_3:68847180-68847199 Msa0658640:CDS 35.0%
AGGCCAAGTTAAACTCAATA+AGG + chr4_3:68847216-68847235 None:intergenic 35.0%
! TCAAACCTTGAAAGTATAGC+CGG + chr4_3:68847287-68847306 None:intergenic 35.0%
AAAAGCAGTGTTCAAACCTT+TGG + chr4_3:68847467-68847486 None:intergenic 35.0%
!!! TACTTTTTTTCCTTGCAGAG+TGG - chr4_3:68847930-68847949 Msa0658640:CDS 35.0%
AGACGATTGCAAGGTAAAAT+GGG + chr4_3:68848109-68848128 None:intergenic 35.0%
TAGACGATTGCAAGGTAAAA+TGG + chr4_3:68848110-68848129 None:intergenic 35.0%
! TTTTACCTTGCAATCGTCTA+TGG - chr4_3:68848110-68848129 Msa0658640:CDS 35.0%
TTTACCTTGCAATCGTCTAT+GGG - chr4_3:68848111-68848130 Msa0658640:CDS 35.0%
ATACTTTCAAAGGATCACCA+AGG - chr4_3:68848227-68848246 Msa0658640:CDS 35.0%
!! TTATTCAGGTTCTGAACATC+TGG - chr4_3:68848398-68848417 Msa0658640:intron 35.0%
CAATATGATCACATGGAGTT+TGG + chr4_3:68848492-68848511 None:intergenic 35.0%
AGCAACGGGATTTGATTAAA+TGG - chr4_3:68848567-68848586 Msa0658640:intron 35.0%
AAATAATTACAGTTCCGTGG+AGG - chr4_3:68848613-68848632 Msa0658640:intron 35.0%
CATTTGATCGTGATAGATGA+TGG - chr4_3:68848782-68848801 Msa0658640:CDS 35.0%
AAATGATAGAACTTTGGCTG+TGG - chr4_3:68848859-68848878 Msa0658640:intron 35.0%
CAAACTCTTTCATCACTACT+AGG + chr4_3:68848911-68848930 None:intergenic 35.0%
CTAGTAGTGATGAAAGAGTT+TGG - chr4_3:68848909-68848928 Msa0658640:intron 35.0%
!!! GAAAGCGTTTTCAACCCTAA+CGG + chr4_3:68843881-68843900 None:intergenic 40.0%
GCAACGTTGATATCCTTGTT+AGG + chr4_3:68844371-68844390 None:intergenic 40.0%
!!! GAGGCTTTGGAGTTTTGATT+AGG - chr4_3:68844490-68844509 Msa0658640:CDS 40.0%
!!! GGAGTTTTGATTAGGTCTGT+CGG - chr4_3:68844498-68844517 Msa0658640:CDS 40.0%
GAATTGGCTACATCAGAGAT+TGG - chr4_3:68844577-68844596 Msa0658640:CDS 40.0%
CTAGACACTTGAAAGTTCCT+TGG + chr4_3:68844663-68844682 None:intergenic 40.0%
! TTCAAGTGTCTAGAATGTGG+TGG - chr4_3:68844670-68844689 Msa0658640:intron 40.0%
! TCAAGTGTCTAGAATGTGGT+GGG - chr4_3:68844671-68844690 Msa0658640:intron 40.0%
CATGTAACAACAGAGCAAAG+TGG - chr4_3:68844874-68844893 Msa0658640:CDS 40.0%
CACAAACTGTCCAATTTGCA+GGG - chr4_3:68845137-68845156 Msa0658640:CDS 40.0%
CATACCTGATATATTGGCGT+TGG - chr4_3:68845185-68845204 Msa0658640:intron 40.0%
AGAGAGATCAGAATGTCGTA+GGG - chr4_3:68845218-68845237 Msa0658640:intron 40.0%
ATAACGAACCTGAACAGAGT+TGG + chr4_3:68845343-68845362 None:intergenic 40.0%
! GGTTTGTTCCAGATTTGTGA+TGG - chr4_3:68845430-68845449 Msa0658640:CDS 40.0%
CTCTTCTACCATCACAAATC+TGG + chr4_3:68845441-68845460 None:intergenic 40.0%
TATATGCAACACCAGTCAGT+TGG + chr4_3:68845594-68845613 None:intergenic 40.0%
GCACACATACATGATGTTCT+CGG - chr4_3:68845753-68845772 Msa0658640:CDS 40.0%
! ACAAGCTTGGTGAAGAAATC+TGG + chr4_3:68845881-68845900 None:intergenic 40.0%
AGCTACACTTTCAACAAGCT+TGG + chr4_3:68845894-68845913 None:intergenic 40.0%
CCTTCTTATGCTAATGAGTG+GGG - chr4_3:68845952-68845971 Msa0658640:intron 40.0%
AAACGTTTATGTCCCCTCTA+AGG + chr4_3:68846006-68846025 None:intergenic 40.0%
AATTGAGACTTTGCACAGCT+AGG + chr4_3:68846043-68846062 None:intergenic 40.0%
CCAGATGTATACACAGATCT+TGG + chr4_3:68846173-68846192 None:intergenic 40.0%
CCAAGATCTGTGTATACATC+TGG - chr4_3:68846170-68846189 Msa0658640:intron 40.0%
ATAAGTTTGTCTGTCCACCA+TGG - chr4_3:68846625-68846644 Msa0658640:intron 40.0%
!! GTAAGAACTTGTTTTCAGGC+CGG - chr4_3:68846868-68846887 Msa0658640:intron 40.0%
CAAGATGGACATAAGAGATC+AGG - chr4_3:68846939-68846958 Msa0658640:CDS 40.0%
GACATAAGAGATCAGGTAAG+AGG - chr4_3:68846946-68846965 Msa0658640:CDS 40.0%
GGTAATCTGTAACATCGTCT+GGG + chr4_3:68847334-68847353 None:intergenic 40.0%
TGGTAATCTGTAACATCGTC+TGG + chr4_3:68847335-68847354 None:intergenic 40.0%
GCACAATATGAGAAGCTATG+TGG + chr4_3:68847355-68847374 None:intergenic 40.0%
TGACGTTAGCTGCATTAATC+AGG + chr4_3:68847543-68847562 None:intergenic 40.0%
GTCAGATGCAAGAAAACTAC+TGG - chr4_3:68847559-68847578 Msa0658640:intron 40.0%
CAGGATTTGTATCAGCTCTA+CGG + chr4_3:68847604-68847623 None:intergenic 40.0%
TGATACAAATCCTGGCAGTA+GGG - chr4_3:68847610-68847629 Msa0658640:intron 40.0%
TTGCATATCGGATGACAGTT+AGG - chr4_3:68847633-68847652 Msa0658640:CDS 40.0%
! AAGGTGTCATCTGGATAATC+AGG - chr4_3:68847694-68847713 Msa0658640:intron 40.0%
AATCGTCTTTAGACCAGCTA+AGG + chr4_3:68847767-68847786 None:intergenic 40.0%
!!! CTATTTTGGGAGCTAGCTTT+TGG - chr4_3:68847892-68847911 Msa0658640:CDS 40.0%
GATTGCAAGGTAAAATGGGT+AGG + chr4_3:68848105-68848124 None:intergenic 40.0%
TTATCCCATAGACGATTGCA+AGG + chr4_3:68848118-68848137 None:intergenic 40.0%
! ACATCTGGATACCCTTTTTC+TGG - chr4_3:68848413-68848432 Msa0658640:CDS 40.0%
! TCAAAGGTGCACCAGAAAAA+GGG + chr4_3:68848427-68848446 None:intergenic 40.0%
TCTGTGGGTTTATCTATTGC+AGG - chr4_3:68848524-68848543 Msa0658640:CDS 40.0%
GGTTTATCTATTGCAGGAAG+TGG - chr4_3:68848530-68848549 Msa0658640:CDS 40.0%
AAGTTGCTGCAATATTGGGA+CGG + chr4_3:68848951-68848970 None:intergenic 40.0%
CACCAAGTTGCTGCAATATT+GGG + chr4_3:68848955-68848974 None:intergenic 40.0%
!!! CAAGCTTTTCTTGGTAATGC+TGG - chr4_3:68848995-68849014 Msa0658640:CDS 40.0%
!! TCTTGGTAATGCTGGAAAAC+TGG - chr4_3:68849003-68849022 Msa0658640:CDS 40.0%
TGGATCACCAGTTTCAGATC+TGG - chr4_3:68844028-68844047 Msa0658640:three_prime_UTR 45.0%
! CCTTTGTCCAGATCTGAAAC+TGG + chr4_3:68844038-68844057 None:intergenic 45.0%
CCAGTTTCAGATCTGGACAA+AGG - chr4_3:68844035-68844054 Msa0658640:three_prime_UTR 45.0%
TTGCAGGCATTCTGCAAGTA+AGG + chr4_3:68844302-68844321 None:intergenic 45.0%
!! TGCCTGCAAGAGGTTTGTTA+TGG - chr4_3:68844313-68844332 Msa0658640:CDS 45.0%
CTCCATAACAAACCTCTTGC+AGG + chr4_3:68844318-68844337 None:intergenic 45.0%
TGGCTACATCAGAGATTGGT+AGG - chr4_3:68844581-68844600 Msa0658640:intron 45.0%
GGTAGGCTTGTATCTGTAAC+AGG - chr4_3:68844598-68844617 Msa0658640:intron 45.0%
GCTTGTATCTGTAACAGGAG+TGG - chr4_3:68844603-68844622 Msa0658640:intron 45.0%
CTGTAACAGGAGTGGTAACA+AGG - chr4_3:68844611-68844630 Msa0658640:intron 45.0%
AGTGGTAACAAGGACAAGTG+AGG - chr4_3:68844621-68844640 Msa0658640:intron 45.0%
AAAGTTCCTTGGAGAAGCTC+AGG + chr4_3:68844652-68844671 None:intergenic 45.0%
! CAAGTGTCTAGAATGTGGTG+GGG - chr4_3:68844672-68844691 Msa0658640:intron 45.0%
ATTGTAGAACATGCTAGGGC+TGG - chr4_3:68845017-68845036 Msa0658640:intron 45.0%
CCTGCAAATTGGACAGTTTG+TGG + chr4_3:68845139-68845158 None:intergenic 45.0%
CCACAAACTGTCCAATTTGC+AGG - chr4_3:68845136-68845155 Msa0658640:CDS 45.0%
GAAGCCAACGCCAATATATC+AGG + chr4_3:68845192-68845211 None:intergenic 45.0%
ACATTCTGATCTCTCTCCAG+GGG + chr4_3:68845214-68845233 None:intergenic 45.0%
GACATTCTGATCTCTCTCCA+GGG + chr4_3:68845215-68845234 None:intergenic 45.0%
GAGAGAGATCAGAATGTCGT+AGG - chr4_3:68845217-68845236 Msa0658640:intron 45.0%
! ATCTGGGAATGAAGGTGTGA+GGG - chr4_3:68845266-68845285 Msa0658640:intron 45.0%
TAAAAGCAAGTCGGTAGGAG+AGG + chr4_3:68845317-68845336 None:intergenic 45.0%
GGCAATAAAAGCAAGTCGGT+AGG + chr4_3:68845322-68845341 None:intergenic 45.0%
TTAGGGGGAAATAACAGGGA+TGG + chr4_3:68845675-68845694 None:intergenic 45.0%
! CTGGTTGATTTAACAGGCTC+AGG - chr4_3:68845823-68845842 Msa0658640:CDS 45.0%
GATTTAACAGGCTCAGGAAC+TGG - chr4_3:68845829-68845848 Msa0658640:CDS 45.0%
CCCCACTCATTAGCATAAGA+AGG + chr4_3:68845955-68845974 None:intergenic 45.0%
!! ATGAAGGCATCAGCCTTAGA+GGG - chr4_3:68845990-68846009 Msa0658640:CDS 45.0%
!! GCTGGTTTGTGCGAATTGAA+TGG - chr4_3:68846105-68846124 Msa0658640:intron 45.0%
GAAAGTCATCATCTGCTGCT+GGG - chr4_3:68846192-68846211 Msa0658640:CDS 45.0%
! CTGCCGCTCTTTTGTATTAG+TGG - chr4_3:68846275-68846294 Msa0658640:intron 45.0%
CAGCTCTATAGAACTAGCGT+AGG - chr4_3:68846326-68846345 Msa0658640:intron 45.0%
GCTTAGTTCAGAATCCATGG+TGG + chr4_3:68846642-68846661 None:intergenic 45.0%
!! TGAGAGGTATTGCCTGAGTT+CGG - chr4_3:68846751-68846770 Msa0658640:intron 45.0%
! GCTTTGATGCTTGCTGACAA+TGG - chr4_3:68846892-68846911 Msa0658640:CDS 45.0%
TTACTGGCATTTGAGGGTCA+TGG - chr4_3:68846980-68846999 Msa0658640:intron 45.0%
GGTTGCAATTCATGAGGCTA+TGG - chr4_3:68847036-68847055 Msa0658640:intron 45.0%
! TTCCACCGGCTATACTTTCA+AGG - chr4_3:68847279-68847298 Msa0658640:CDS 45.0%
! AACCTTGAAAGTATAGCCGG+TGG + chr4_3:68847284-68847303 None:intergenic 45.0%
AGTTCTGCTGTAGTGAACGT+TGG + chr4_3:68847410-68847429 None:intergenic 45.0%
CGTAGAGCTGATACAAATCC+TGG - chr4_3:68847602-68847621 Msa0658640:intron 45.0%
CTGATACAAATCCTGGCAGT+AGG - chr4_3:68847609-68847628 Msa0658640:intron 45.0%
! GGCAGTTGGAAGCTTTAATC+AGG - chr4_3:68847654-68847673 Msa0658640:CDS 45.0%
! GGAAGCTTTAATCAGGCTGT+CGG - chr4_3:68847661-68847680 Msa0658640:CDS 45.0%
ATCCAGATGACACCTTGCAA+TGG + chr4_3:68847690-68847709 None:intergenic 45.0%
ACTGCTAAACGAACATGACG+AGG + chr4_3:68847813-68847832 None:intergenic 45.0%
CAAGATATGGACGAAGAAGC+AGG - chr4_3:68847988-68848007 Msa0658640:intron 45.0%
! TCTTTGGGGGTTAGATCCAT+CGG + chr4_3:68848184-68848203 None:intergenic 45.0%
! CTGTCTAAGACGCATGACAA+GGG + chr4_3:68848253-68848272 None:intergenic 45.0%
! CTCAAAGGTGCACCAGAAAA+AGG + chr4_3:68848428-68848447 None:intergenic 45.0%
TAATTACAGTTCCGTGGAGG+AGG - chr4_3:68848616-68848635 Msa0658640:intron 45.0%
! TGATCGTGATAGATGATGGC+AGG - chr4_3:68848786-68848805 Msa0658640:CDS 45.0%
GTCCCAATATTGCAGCAACT+TGG - chr4_3:68848950-68848969 Msa0658640:intron 45.0%
CCACCAAGTTGCTGCAATAT+TGG + chr4_3:68848956-68848975 None:intergenic 45.0%
CCAATATTGCAGCAACTTGG+TGG - chr4_3:68848953-68848972 Msa0658640:intron 45.0%
AAGCTTGCAGCTCAAGACAA+AGG + chr4_3:68848982-68849001 None:intergenic 45.0%
! CTTGAGCTGCAAGCTTTTCT+TGG - chr4_3:68848986-68849005 Msa0658640:CDS 45.0%
!!! TATGAATAATATAAAATTTT+TGG - chr4_3:68845621-68845640 Msa0658640:intron 5.0%
ACTTGCAGAATGCCTGCAAG+AGG - chr4_3:68844303-68844322 Msa0658640:CDS 50.0%
TGATTAGGTCTGTCGGTGTG+AGG - chr4_3:68844505-68844524 Msa0658640:CDS 50.0%
GATTAGGTCTGTCGGTGTGA+GGG - chr4_3:68844506-68844525 Msa0658640:CDS 50.0%
TTGGCAAAGGGTCAGAATGC+AGG - chr4_3:68844929-68844948 Msa0658640:CDS 50.0%
ACGTCCAATGAGATACCTGC+TGG - chr4_3:68844954-68844973 Msa0658640:intron 50.0%
AGAGCCAGCAGGTATCTCAT+TGG + chr4_3:68844961-68844980 None:intergenic 50.0%
CGACATTCTGATCTCTCTCC+AGG + chr4_3:68845216-68845235 None:intergenic 50.0%
TAGGGAAGCTTCTCAACGCA+AGG - chr4_3:68845236-68845255 Msa0658640:intron 50.0%
AGGGAAGCTTCTCAACGCAA+GGG - chr4_3:68845237-68845256 Msa0658640:intron 50.0%
!! AACGCAAGGGTGCTTCATCT+GGG - chr4_3:68845250-68845269 Msa0658640:intron 50.0%
GGTGCTTCATCTGGGAATGA+AGG - chr4_3:68845258-68845277 Msa0658640:intron 50.0%
! CATCTGGGAATGAAGGTGTG+AGG - chr4_3:68845265-68845284 Msa0658640:intron 50.0%
! TCTGGGAATGAAGGTGTGAG+GGG - chr4_3:68845267-68845286 Msa0658640:intron 50.0%
AGCTGTCATGACCAACTGAC+TGG - chr4_3:68845580-68845599 Msa0658640:intron 50.0%
!! CATGAAGGCATCAGCCTTAG+AGG - chr4_3:68845989-68846008 Msa0658640:CDS 50.0%
!! TGAAGGCATCAGCCTTAGAG+GGG - chr4_3:68845991-68846010 Msa0658640:CDS 50.0%
GGAAAGTCATCATCTGCTGC+TGG - chr4_3:68846191-68846210 Msa0658640:CDS 50.0%
GTTGACTGCAACTGTTGCCA+AGG - chr4_3:68846214-68846233 Msa0658640:CDS 50.0%
GTTGCCAAGGAACCAGAAAC+TGG - chr4_3:68846227-68846246 Msa0658640:CDS 50.0%
!! CTCTCCAGTTTCTGGTTCCT+TGG + chr4_3:68846234-68846253 None:intergenic 50.0%
TATCATACCGTCCTCCAGCA+GGG + chr4_3:68847141-68847160 None:intergenic 50.0%
TTATCATACCGTCCTCCAGC+AGG + chr4_3:68847142-68847161 None:intergenic 50.0%
GTACAATGTGGCTCTTCCAC+CGG - chr4_3:68847265-68847284 Msa0658640:CDS 50.0%
CTGGCAGTAGGGTTGCATAT+CGG - chr4_3:68847621-68847640 Msa0658640:intron 50.0%
TCGGATGACAGTTAGGCAGT+TGG - chr4_3:68847640-68847659 Msa0658640:CDS 50.0%
! AGCTTTAATCAGGCTGTCGG+AGG - chr4_3:68847664-68847683 Msa0658640:CDS 50.0%
TCACTTGACTCCACTCTGCA+AGG + chr4_3:68847943-68847962 None:intergenic 50.0%
GAAGAAGCAGGTAGTGACGA+TGG - chr4_3:68848000-68848019 Msa0658640:intron 50.0%
AACGATGCTGATGGTCAAGC+TGG - chr4_3:68848033-68848052 Msa0658640:intron 50.0%
AGCTGGAAACTCTACTGCTC+AGG - chr4_3:68848050-68848069 Msa0658640:intron 50.0%
CTTGCAGAAAAACCAGCCGA+TGG - chr4_3:68848165-68848184 Msa0658640:CDS 50.0%
! GCTGTCTAAGACGCATGACA+AGG + chr4_3:68848254-68848273 None:intergenic 50.0%
GAGGAGACCGTAATGCAAGA+AGG - chr4_3:68848276-68848295 Msa0658640:intron 50.0%
ATTGCAGGAAGTGGCTTAGC+TGG - chr4_3:68848539-68848558 Msa0658640:CDS 50.0%
TTGCAGGAAGTGGCTTAGCT+GGG - chr4_3:68848540-68848559 Msa0658640:CDS 50.0%
GCTTAGCTGGGATGAAGCAA+CGG - chr4_3:68848552-68848571 Msa0658640:CDS 50.0%
CTTAGCTGGGATGAAGCAAC+GGG - chr4_3:68848553-68848572 Msa0658640:CDS 50.0%
TTCAACTTTCGCCTCCTCCA+CGG + chr4_3:68848630-68848649 None:intergenic 50.0%
ATTGGGACGGCGAAACAAAG+TGG + chr4_3:68848938-68848957 None:intergenic 50.0%
GTTCGACCTGAGCTTCTCCA+AGG - chr4_3:68844643-68844662 Msa0658640:intron 55.0%
TGGCTCTCTGCCTAGGTCAT+TGG - chr4_3:68844974-68844993 Msa0658640:intron 55.0%
!! ATATTGGCGTTGGCTTCCCC+TGG - chr4_3:68845195-68845214 Msa0658640:intron 55.0%
!! CAACGCAAGGGTGCTTCATC+TGG - chr4_3:68845249-68845268 Msa0658640:intron 55.0%
! ATGAAGGTGTGAGGGGCCTT+AGG - chr4_3:68845274-68845293 Msa0658640:intron 55.0%
! TGAAGGTGTGAGGGGCCTTA+GGG - chr4_3:68845275-68845294 Msa0658640:intron 55.0%
CTCTGACTCCCAAAGCCCTA+AGG + chr4_3:68845293-68845312 None:intergenic 55.0%
GTCAGCAAGCATCAAAGCGC+CGG + chr4_3:68846890-68846909 None:intergenic 55.0%
GGCATTTGAGGGTCATGGAC+TGG - chr4_3:68846985-68847004 Msa0658640:intron 55.0%
CGATATGCAACCCTACTGCC+AGG + chr4_3:68847623-68847642 None:intergenic 55.0%
! GGCCATTGCAAGGTGTCATC+TGG - chr4_3:68847685-68847704 Msa0658640:intron 55.0%
!! CACCTCACCATTGGTTCCAG+CGG + chr4_3:68848079-68848098 None:intergenic 55.0%
GGTAGGAGACACCTCACCAT+TGG + chr4_3:68848088-68848107 None:intergenic 55.0%
AAGACGCATGACAAGGGCCT+TGG + chr4_3:68848247-68848266 None:intergenic 55.0%
CATGCGTCTTAGACAGCACG+AGG - chr4_3:68848257-68848276 Msa0658640:CDS 55.0%
CAAGCAGCATCAGAAGCTGC+TGG - chr4_3:68848809-68848828 Msa0658640:CDS 55.0%
!! TACCTGCTGGCTCTCTGCCT+AGG - chr4_3:68844967-68844986 Msa0658640:intron 60.0%
TGTGAGGGGCCTTAGGGCTT+TGG - chr4_3:68845281-68845300 Msa0658640:intron 60.0%
GTGAGGGGCCTTAGGGCTTT+GGG - chr4_3:68845282-68845301 Msa0658640:intron 60.0%
! AGGGTTGGCAGCGGCAAGAA+TGG + chr4_3:68847122-68847141 None:intergenic 60.0%
ATACCGTCCTCCAGCAGGGT+TGG + chr4_3:68847137-68847156 None:intergenic 60.0%
TCTACTGCTCAGGAAGCCGC+TGG - chr4_3:68848060-68848079 Msa0658640:intron 60.0%
CAGGAAGCCGCTGGAACCAA+TGG - chr4_3:68848069-68848088 Msa0658640:intron 60.0%
AGCCGCTGGAACCAATGGTG+AGG - chr4_3:68848074-68848093 Msa0658640:intron 60.0%
TGGGGGTTAGATCCATCGGC+TGG + chr4_3:68848180-68848199 None:intergenic 60.0%
GACCTAGGCAGAGAGCCAGC+AGG + chr4_3:68844972-68844991 None:intergenic 65.0%
! TCCTCCAGCAGGGTTGGCAG+CGG + chr4_3:68847131-68847150 None:intergenic 65.0%
CTGCCAACCCTGCTGGAGGA+CGG - chr4_3:68847131-68847150 Msa0658640:CDS 65.0%
GGCTGTCGGAGGCCATTGCA+AGG - chr4_3:68847675-68847694 Msa0658640:CDS 65.0%
CTTGCCGCTGCCAACCCTGC+TGG - chr4_3:68847124-68847143 Msa0658640:CDS 70.0%
GCCGCTGCCAACCCTGCTGG+AGG - chr4_3:68847127-68847146 Msa0658640:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 68843869 68849274 68843869 ID=Msa0658640;Name=Msa0658640
chr4_3 mRNA 68843869 68849274 68843869 ID=Msa0658640-mRNA-1;Parent=Msa0658640;Name=Msa0658640-mRNA-1;_AED=0.11;_eAED=0.11;_QI=101|1|1|1|0.94|0.94|18|370|792
chr4_3 exon 68843869 68844382 68843869 ID=Msa0658640-mRNA-1:exon:20058;Parent=Msa0658640-mRNA-1
chr4_3 exon 68844467 68844597 68844467 ID=Msa0658640-mRNA-1:exon:20057;Parent=Msa0658640-mRNA-1
chr4_3 exon 68844846 68844971 68844846 ID=Msa0658640-mRNA-1:exon:20056;Parent=Msa0658640-mRNA-1
chr4_3 exon 68845053 68845195 68845053 ID=Msa0658640-mRNA-1:exon:20055;Parent=Msa0658640-mRNA-1
chr4_3 exon 68845284 68845339 68845284 ID=Msa0658640-mRNA-1:exon:20054;Parent=Msa0658640-mRNA-1
chr4_3 exon 68845428 68845589 68845428 ID=Msa0658640-mRNA-1:exon:20053;Parent=Msa0658640-mRNA-1
chr4_3 exon 68845674 68845877 68845674 ID=Msa0658640-mRNA-1:exon:20052;Parent=Msa0658640-mRNA-1
chr4_3 exon 68845966 68846106 68845966 ID=Msa0658640-mRNA-1:exon:20051;Parent=Msa0658640-mRNA-1
chr4_3 exon 68846183 68846257 68846183 ID=Msa0658640-mRNA-1:exon:20050;Parent=Msa0658640-mRNA-1
chr4_3 exon 68846878 68846992 68846878 ID=Msa0658640-mRNA-1:exon:20049;Parent=Msa0658640-mRNA-1
chr4_3 exon 68847075 68847304 68847075 ID=Msa0658640-mRNA-1:exon:20048;Parent=Msa0658640-mRNA-1
chr4_3 exon 68847627 68847701 68847627 ID=Msa0658640-mRNA-1:exon:20047;Parent=Msa0658640-mRNA-1
chr4_3 exon 68847790 68847985 68847790 ID=Msa0658640-mRNA-1:exon:20046;Parent=Msa0658640-mRNA-1
chr4_3 exon 68848098 68848291 68848098 ID=Msa0658640-mRNA-1:exon:20045;Parent=Msa0658640-mRNA-1
chr4_3 exon 68848411 68848573 68848411 ID=Msa0658640-mRNA-1:exon:20044;Parent=Msa0658640-mRNA-1
chr4_3 exon 68848726 68848851 68848726 ID=Msa0658640-mRNA-1:exon:20043;Parent=Msa0658640-mRNA-1
chr4_3 exon 68848955 68849104 68848955 ID=Msa0658640-mRNA-1:exon:20042;Parent=Msa0658640-mRNA-1
chr4_3 exon 68849226 68849274 68849226 ID=Msa0658640-mRNA-1:exon:20041;Parent=Msa0658640-mRNA-1
chr4_3 five_prime_UTR 68849226 68849274 68849226 ID=Msa0658640-mRNA-1:five_prime_utr;Parent=Msa0658640-mRNA-1
chr4_3 five_prime_UTR 68849053 68849104 68849053 ID=Msa0658640-mRNA-1:five_prime_utr;Parent=Msa0658640-mRNA-1
chr4_3 CDS 68848955 68849052 68848955 ID=Msa0658640-mRNA-1:cds;Parent=Msa0658640-mRNA-1
chr4_3 CDS 68848726 68848851 68848726 ID=Msa0658640-mRNA-1:cds;Parent=Msa0658640-mRNA-1
chr4_3 CDS 68848411 68848573 68848411 ID=Msa0658640-mRNA-1:cds;Parent=Msa0658640-mRNA-1
chr4_3 CDS 68848098 68848291 68848098 ID=Msa0658640-mRNA-1:cds;Parent=Msa0658640-mRNA-1
chr4_3 CDS 68847790 68847985 68847790 ID=Msa0658640-mRNA-1:cds;Parent=Msa0658640-mRNA-1
chr4_3 CDS 68847627 68847701 68847627 ID=Msa0658640-mRNA-1:cds;Parent=Msa0658640-mRNA-1
chr4_3 CDS 68847075 68847304 68847075 ID=Msa0658640-mRNA-1:cds;Parent=Msa0658640-mRNA-1
chr4_3 CDS 68846878 68846992 68846878 ID=Msa0658640-mRNA-1:cds;Parent=Msa0658640-mRNA-1
chr4_3 CDS 68846183 68846257 68846183 ID=Msa0658640-mRNA-1:cds;Parent=Msa0658640-mRNA-1
chr4_3 CDS 68845966 68846106 68845966 ID=Msa0658640-mRNA-1:cds;Parent=Msa0658640-mRNA-1
chr4_3 CDS 68845674 68845877 68845674 ID=Msa0658640-mRNA-1:cds;Parent=Msa0658640-mRNA-1
chr4_3 CDS 68845428 68845589 68845428 ID=Msa0658640-mRNA-1:cds;Parent=Msa0658640-mRNA-1
chr4_3 CDS 68845284 68845339 68845284 ID=Msa0658640-mRNA-1:cds;Parent=Msa0658640-mRNA-1
chr4_3 CDS 68845053 68845195 68845053 ID=Msa0658640-mRNA-1:cds;Parent=Msa0658640-mRNA-1
chr4_3 CDS 68844846 68844971 68844846 ID=Msa0658640-mRNA-1:cds;Parent=Msa0658640-mRNA-1
chr4_3 CDS 68844467 68844597 68844467 ID=Msa0658640-mRNA-1:cds;Parent=Msa0658640-mRNA-1
chr4_3 CDS 68844239 68844382 68844239 ID=Msa0658640-mRNA-1:cds;Parent=Msa0658640-mRNA-1
chr4_3 three_prime_UTR 68843869 68844238 68843869 ID=Msa0658640-mRNA-1:three_prime_utr;Parent=Msa0658640-mRNA-1
Gene Sequence

>Msa0658640

ATGAGAGCTAACGAATCCAACACCATGTTCATTGATTTTGAACATGTGATTAGATTCAGTGATGTTCTTCAGAAAGCTATCTCTGATGAATATTTGAGGTTCGAACCTTACTTGCAGAATGCCTGCAAGAGGTTTGTTATGGAGCTTAAGCCGACATTCATTTCTGATGATAACCCTAACAAGGATATCAACGTTGCCTTCTATAACATTCCAATTGTCAAGAGGCTAAGGGAATTGGCTACATCAGAGATTGGTAGGCTTGTATCTGTAACAGGAGTGGTAACAAGGACAAGTGAGGTTCGACCTGAGCTTCTCCAAGGAACTTTCAAGTGTCTAGAATGTGGTGGGGTTATAAAGAATGTTGAACAGCAATTCAAGTATACTGAGCCAACAATTTGTCCAAATGCTACATGTAACAACAGAGCAAAGTGGGCACTGCTTCGCCAAGAGAGCAAATTTACTGATTGGCAAAGGGTCAGAATGCAGGAGACGTCCAATGAGATACCTGCTGGCTCTCTGCCTAGGTCATTGGATGTTATTCTTCGTCATGAGATTGTAGAACATGCTAGGGCTGGTGACACGGTGATTTTTACTGGAACTGTAATTGTCATACCTGATATATTGGCGTTGGCTTCCCCTGGAGAGAGATCAGAATGTCGTAGGGAAGCTTCTCAACGCAAGGGTGCTTCATCTGGGAATGAAGGTGTGAGGGGCCTTAGGGCTTTGGGAGTCAGAGACCTCTCCTACCGACTTGCTTTTATTGCCAACTCTGTTCAGATTTGTGATGGTAGAAGAGAAATAGACATCAGGAATAGAAAGAAGGATTCAGATGAAGATGATCTGCAATTCACTGCTCAGGAACTGGATGAAGTTCAAAGAATGAGGAACACTCCAGATTTCTTCACCAAGCTTGTTGAAAGTGTAGCTCCAACTATTTTTGGTCATCAAGATATTAAGCGAGCAATCCTTCTTATGCTAATGAGTGGGGTTCACAAATCTACTCATGAAGGCATCAGCCTTAGAGGGGACATAAACGTTTGTATTGTTGGAGATCCTAGCTGTGCAAAGTCTCAATTTCTTAAGTATACTTCAAGCATTGTTCCAAGATCTGTGTATACATCTGGAAAGTCATCATCTGCTGCTGGGTTGACTGCAACTGTTGCCAAGGAACCAGAAACTGGAGAGTTTTGTATTGAGGCCGGCGCTTTGATGCTTGCTGACAATGGCATTTGCTGCATTGATGAATTTGACAAGATGGACATAAGAGATCAGGTTGCAATTCATGAGGCTATGGAACAACAAACTATTAGTATCACAAAAGCAGGAATACAAGCAACACTCAATGCTCGTACTTCCATTCTTGCCGCTGCCAACCCTGCTGGAGGACGGTATGATAAGTCTAAACCACTGAAGTACAATGTGGCTCTTCCACCGGCTATACTTTCAAGGTTTGATCTTGTATACATTATGATTGATGACCCAGACGATGTTACAGATTACCACATAGCTTCTCATATTGTGCGAGTTCATCAAAAGCGCGAAGAAGCTCTTGCTCCAACGTTCACTACAGCAGAACTGAAGCGTTATATAGCCTATGCAAAAACTCTTAAACCAAAGCTAACGTCAGATGCAAGAAAACTACTGGTAGACTCTTATGTTTCTCTCCGTAGAGCTGATACAAATCCTGGCAGTAGGGTTGCATATCGGATGACAGTTAGGCAGTTGGAAGCTTTAATCAGGCTGTCGGAGGCCATTGCAAGGTGTCATCTGGATAATCAGGTACAACCTCGTCATGTTCGTTTAGCAGTAAAACTGCTGCAAACTTCTATAATAAGAGTGGAGTCAAGTGAGATCGATTTATCTGAGTTTCAAGATCAAGATATGGACGAAGAAGCAGGTAGTGACGATGGAAATGATAATAACGATGCTGATGGTCAAGCTGGAAACTCTACTGCTCAGGAAGCCGCTGGAACCAATGAAAAACCAGCCGATGGATCTAACCCCCAAAGAAAAAAATCTACTGTAACTGATGAATACTTTCAAAGGATCACCAAGGCCCTTGTCATGCGTCTTAGACAGCACGAGGAGACCGTAATGCAAGAAGGAAGTGGCTTAGCTGGGATGAAGCAACGGGATTTGATTAAATGGTATGTAGACCAGCAAAATGAGAAAAATAATTACAGTTCCGTGGAGGAGGCGAAAGTTGAAATTTCCCAAATTAAAGCAATTATAGAGATTTTAATTCGAAGAGAGGGGCATTTGATCGTGATAGATGATGGCAGGCAAGCAGCATCAGAAGCTGCTGGTGCAGAACAATCAGAGTCTGCTGCTAGAAATGATAGAACTTTGGCTGTGGCTCCTAATTATGTTGTTGATTAA
Protein sequence

>Msa0658640

MRANESNTMFIDFEHVIRFSDVLQKAISDEYLRFEPYLQNACKRFVMELKPTFISDDNPNKDINVAFYNIPIVKRLRELATSEIGRLVSVTGVVTRTSEVRPELLQGTFKCLECGGVIKNVEQQFKYTEPTICPNATCNNRAKWALLRQESKFTDWQRVRMQETSNEIPAGSLPRSLDVILRHEIVEHARAGDTVIFTGTVIVIPDILALASPGERSECRREASQRKGASSGNEGVRGLRALGVRDLSYRLAFIANSVQICDGRREIDIRNRKKDSDEDDLQFTAQELDEVQRMRNTPDFFTKLVESVAPTIFGHQDIKRAILLMLMSGVHKSTHEGISLRGDINVCIVGDPSCAKSQFLKYTSSIVPRSVYTSGKSSSAAGLTATVAKEPETGEFCIEAGALMLADNGICCIDEFDKMDIRDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPAGGRYDKSKPLKYNVALPPAILSRFDLVYIMIDDPDDVTDYHIASHIVRVHQKREEALAPTFTTAELKRYIAYAKTLKPKLTSDARKLLVDSYVSLRRADTNPGSRVAYRMTVRQLEALIRLSEAIARCHLDNQVQPRHVRLAVKLLQTSIIRVESSEIDLSEFQDQDMDEEAGSDDGNDNNDADGQAGNSTAQEAAGTNEKPADGSNPQRKKSTVTDEYFQRITKALVMRLRQHEETVMQEGSGLAGMKQRDLIKWYVDQQNEKNNYSSVEEAKVEISQIKAIIEILIRREGHLIVIDDGRQAASEAAGAEQSESAARNDRTLAVAPNYVVD*