Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0077980 | Msa0587430 | 0.804110 | 2.527633e-49 | -8.615850e-47 |
| Msa0434370 | Msa0587430 | 0.818199 | 2.220674e-52 | -8.615850e-47 |
| Msa0307380 | Msa0587430 | 0.806700 | 7.241058e-50 | -8.615850e-47 |
| Msa0587430 | Msa0627270 | 0.827056 | 1.930909e-54 | -8.615850e-47 |
| Msa0587430 | Msa0651870 | 0.826544 | 2.559714e-54 | -8.615850e-47 |
| Msa0587430 | Msa0651890 | 0.830129 | 3.493249e-55 | -8.615850e-47 |
| Msa0587430 | Msa0700410 | 0.822449 | 2.354505e-53 | -8.615850e-47 |
| Msa0587430 | Msa0748480 | 0.815910 | 7.255622e-52 | -8.615850e-47 |
| Msa0587430 | Msa1133760 | 0.811230 | 7.767589e-51 | -8.615850e-47 |
| Msa0587430 | Msa1251410 | 0.805231 | 1.474875e-49 | -8.615850e-47 |
| Msa0587430 | Msa1403940 | 0.841079 | 5.904999e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 74 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGGCAGATCTAATTTAATT+AGG | 0.167032 | 4_2:-8913516 | Msa0587430:exon |
| CCAGTACATCAGAAGATTTC+TGG | 0.233221 | 4_2:-8912171 | Msa0587430:three_prime_UTR |
| TGGCTACAGGTCTAATTCTA+TGG | 0.253969 | 4_2:-8911105 | Msa0587430:intron |
| AGAGAGAAATTACACTCTTT+TGG | 0.276883 | 4_2:+8910127 | None:intergenic |
| TGAAGAGATGGGATTGCTTT+TGG | 0.283969 | 4_2:+8913744 | None:intergenic |
| TGGCAGATCTAATTTAATTA+GGG | 0.319342 | 4_2:-8913515 | Msa0587430:exon |
| GACCACAAGCACGCATGATA+TGG | 0.336073 | 4_2:-8912149 | Msa0587430:three_prime_UTR |
| AATTGTTGCGTTCGATTCTC+AGG | 0.337177 | 4_2:+8911046 | None:intergenic |
| GTTCTTGCTTCTGTAGGAAC+AGG | 0.345659 | 4_2:-8910197 | Msa0587430:three_prime_UTR |
| CAAGAACTACAATTATTTCA+TGG | 0.350778 | 4_2:+8910213 | None:intergenic |
| GATGTTATTCACCTTAATTT+AGG | 0.359102 | 4_2:+8911016 | None:intergenic |
| CCAGAAATCTTCTGATGTAC+TGG | 0.367815 | 4_2:+8912171 | None:intergenic |
| AGAGGGGTTGTTGGAAGAAC+TGG | 0.385585 | 4_2:+8912054 | None:intergenic |
| TCTTGTGGACATTTGGGAAC+AGG | 0.394685 | 4_2:-8910293 | Msa0587430:three_prime_UTR |
| AATTACGAGAGCCTAAATTA+AGG | 0.395920 | 4_2:-8911027 | Msa0587430:intron |
| TGATTGTCCTGGTTTCTCTC+TGG | 0.404723 | 4_2:-8910067 | Msa0587430:three_prime_UTR |
| CCCTCTGAATTTGTAAATCA+TGG | 0.405217 | 4_2:-8912037 | Msa0587430:intron |
| TTTCAGATACTACATGCATA+TGG | 0.409313 | 4_2:-8913474 | Msa0587430:three_prime_UTR |
| TTCATTTGAGAGAGAGAAAG+AGG | 0.422020 | 4_2:-8913804 | None:intergenic |
| ATTGTAGTTCTTGCTTCTGT+AGG | 0.442960 | 4_2:-8910203 | Msa0587430:three_prime_UTR |
| TACAAATTCAGAGGGGTTGT+TGG | 0.443407 | 4_2:+8912045 | None:intergenic |
| AGAGTGTAATTTCTCTCTGC+AGG | 0.450789 | 4_2:-8910122 | Msa0587430:three_prime_UTR |
| GGAATCAGACTCGGCAGCGT+TGG | 0.451348 | 4_2:-8911084 | Msa0587430:three_prime_UTR |
| GAATCAGACTCGGCAGCGTT+GGG | 0.452328 | 4_2:-8911083 | Msa0587430:three_prime_UTR |
| ACTGTGGAAGTACCAACAAC+AGG | 0.460725 | 4_2:-8912226 | Msa0587430:three_prime_UTR |
| ACACAATCTTCACCTCATAA+AGG | 0.466522 | 4_2:-8913675 | Msa0587430:intron |
| CTTTATTTAATTGATTGTCC+TGG | 0.478344 | 4_2:-8910078 | Msa0587430:three_prime_UTR |
| TTCAGATACTACATGCATAT+GGG | 0.483637 | 4_2:-8913473 | Msa0587430:three_prime_UTR |
| CTGTATGACTGAGCCGTTGA+AGG | 0.494149 | 4_2:-8910265 | Msa0587430:three_prime_UTR |
| CTTCAACGGCTCAGTCATAC+AGG | 0.494492 | 4_2:+8910266 | None:intergenic |
| TTTCTCTTCAATTTCGATTG+TGG | 0.499925 | 4_2:-8913535 | Msa0587430:CDS |
| CAGAAATCTTCTGATGTACT+GGG | 0.501490 | 4_2:+8912172 | None:intergenic |
| AAGGTTGAGGATGTGCCGTT+TGG | 0.502583 | 4_2:-8910246 | Msa0587430:three_prime_UTR |
| TCAGGTCTGATGTGAAGAGA+TGG | 0.506419 | 4_2:+8913732 | None:intergenic |
| ATGCTTACAGCGAGAGGGAT+AGG | 0.506679 | 4_2:+8910597 | None:intergenic |
| CAGACTCGGCAGCGTTGGGT+TGG | 0.511397 | 4_2:-8911079 | Msa0587430:three_prime_UTR |
| GTTGTGTTGGATGCTATAAA+AGG | 0.523538 | 4_2:-8912261 | Msa0587430:three_prime_UTR |
| CCATGATTTACAAATTCAGA+GGG | 0.533140 | 4_2:+8912037 | None:intergenic |
| AGGGTTGACAAAACAAGGTA+AGG | 0.550564 | 4_2:-8912206 | Msa0587430:three_prime_UTR |
| GACTGAGCCGTTGAAGGTTG+AGG | 0.552481 | 4_2:-8910259 | Msa0587430:three_prime_UTR |
| ACCATGATTTACAAATTCAG+AGG | 0.565784 | 4_2:+8912036 | None:intergenic |
| TAACAGAGCAGTGGTTGTGT+TGG | 0.566752 | 4_2:-8912274 | Msa0587430:intron |
| CATGGATCAAACAAACCAAA+CGG | 0.567448 | 4_2:+8910231 | None:intergenic |
| AACAGTGCTGTTCAATCACA+AGG | 0.569798 | 4_2:-8912124 | Msa0587430:three_prime_UTR |
| CAGGTCTGATGTGAAGAGAT+GGG | 0.570558 | 4_2:+8913733 | None:intergenic |
| TCGGTAATGAAACCGACGAT+AGG | 0.573001 | 4_2:+8913697 | None:intergenic |
| GTCCATATCATGCGTGCTTG+TGG | 0.576778 | 4_2:+8912147 | None:intergenic |
| TTCTTGCTTCTGTAGGAACA+GGG | 0.586193 | 4_2:-8910196 | Msa0587430:three_prime_UTR |
| GGTTGTTGGAAGAACTGGCA+TGG | 0.586251 | 4_2:+8912059 | None:intergenic |
| TGTTGGATGCTATAAAAGGC+CGG | 0.591005 | 4_2:-8912257 | Msa0587430:three_prime_UTR |
| GACAAAACAAGGTAAGGCAG+TGG | 0.597556 | 4_2:-8912200 | Msa0587430:three_prime_UTR |
| CTTGCTTCTGTAGGAACAGG+GGG | 0.600101 | 4_2:-8910194 | Msa0587430:three_prime_UTR |
| TTCTCTCTGGTATCCACAAG+AGG | 0.601379 | 4_2:-8910054 | Msa0587430:three_prime_UTR |
| ACAACAGGGTTGACAAAACA+AGG | 0.612108 | 4_2:-8912211 | Msa0587430:three_prime_UTR |
| TAATTCTATGGAATCAGACT+CGG | 0.616536 | 4_2:-8911093 | Msa0587430:three_prime_UTR |
| ACTTCCACAGTAACTAGTGC+CGG | 0.617912 | 4_2:+8912238 | None:intergenic |
| CAGCGAGAGGGATAGGCTGA+CGG | 0.622095 | 4_2:+8910604 | None:intergenic |
| GTGGACATTTGGGAACAGGA+TGG | 0.627320 | 4_2:-8910289 | Msa0587430:three_prime_UTR |
| GGCACATCCTCAACCTTCAA+CGG | 0.627918 | 4_2:+8910252 | None:intergenic |
| AAGTTGATGCTTACAGCGAG+AGG | 0.634340 | 4_2:+8910591 | None:intergenic |
| AGAGGGATAGGCTGACGGAA+TGG | 0.635867 | 4_2:+8910609 | None:intergenic |
| AAGTCTAACTAATCAAGCTG+TGG | 0.637050 | 4_2:-8912086 | Msa0587430:three_prime_UTR |
| TCAGATACTACATGCATATG+GGG | 0.639910 | 4_2:-8913472 | Msa0587430:intron |
| GTTGTTGGAAGAACTGGCAT+GGG | 0.640403 | 4_2:+8912060 | None:intergenic |
| CTGTGGAAGTACCAACAACA+GGG | 0.643787 | 4_2:-8912225 | Msa0587430:three_prime_UTR |
| AGAGAAAGAAAACCTATCGT+CGG | 0.648510 | 4_2:-8913709 | Msa0587430:CDS |
| AGTTGATGCTTACAGCGAGA+GGG | 0.648620 | 4_2:+8910592 | None:intergenic |
| TTATGAGGTGAAGATTGTGT+CGG | 0.653385 | 4_2:+8913678 | None:intergenic |
| TGTGATTTGTAACAGAGCAG+TGG | 0.661472 | 4_2:-8912283 | Msa0587430:intron |
| AAGGCCGGCACTAGTTACTG+TGG | 0.673031 | 4_2:-8912242 | Msa0587430:three_prime_UTR |
| TCTTGCTTCTGTAGGAACAG+GGG | 0.677688 | 4_2:-8910195 | Msa0587430:three_prime_UTR |
| CATGATTTACAAATTCAGAG+GGG | 0.706886 | 4_2:+8912038 | None:intergenic |
| GTGGATACCAGAGAGAAACC+AGG | 0.714044 | 4_2:+8910060 | None:intergenic |
| ACAGTGCTGTTCAATCACAA+GGG | 0.754566 | 4_2:-8912123 | Msa0587430:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTATGAATCAATATAA+GGG | + | chr4_2:8910488-8910507 | None:intergenic | 10.0% |
| !! | AATTATTATGAATCAATATA+AGG | + | chr4_2:8910489-8910508 | None:intergenic | 10.0% |
| !!! | TTTATCTATGAAAATATTTT+TGG | - | chr4_2:8912708-8912727 | Msa0587430:intron | 10.0% |
| !!! | TTAATTAGGGTTTTTTATTT+TGG | - | chr4_2:8910331-8910350 | Msa0587430:intron | 15.0% |
| !!! | TAATTAGGGTTTTTTATTTT+GGG | - | chr4_2:8910332-8910351 | Msa0587430:intron | 15.0% |
| !! | AAAGGAAATTAAATCAAAAA+AGG | + | chr4_2:8910440-8910459 | None:intergenic | 15.0% |
| !!! | AACTAGAATTTTTTAGTTTT+TGG | - | chr4_2:8910789-8910808 | Msa0587430:intron | 15.0% |
| !! | TGATTCTGTAAAATTAATTA+TGG | + | chr4_2:8910911-8910930 | None:intergenic | 15.0% |
| !! | AATACAAATATTACAAACAT+GGG | + | chr4_2:8912576-8912595 | None:intergenic | 15.0% |
| !! | TAATACAAATATTACAAACA+TGG | + | chr4_2:8912577-8912596 | None:intergenic | 15.0% |
| !!! | ATAAGTTTTCATATACTTTA+GGG | - | chr4_2:8913373-8913392 | Msa0587430:intron | 15.0% |
| !!! | AATTAGGGTTTTTTATTTTG+GGG | - | chr4_2:8910333-8910352 | Msa0587430:intron | 20.0% |
| !!! | TAATTTCCTTTTTAGCTTTT+TGG | - | chr4_2:8910449-8910468 | Msa0587430:intron | 20.0% |
| !!! | AATTTCCTTTTTAGCTTTTT+GGG | - | chr4_2:8910450-8910469 | Msa0587430:intron | 20.0% |
| !! | ATTAATTTACTGTGTATGTT+TGG | - | chr4_2:8910593-8910612 | Msa0587430:intron | 20.0% |
| !! | TAGATTTACCAATAAACTTA+TGG | + | chr4_2:8910834-8910853 | None:intergenic | 20.0% |
| !!! | GGTAAACTTAAAATTGATTT+CGG | + | chr4_2:8911045-8911064 | None:intergenic | 20.0% |
| !! | AACATAATTGAATGAATGTT+TGG | + | chr4_2:8911099-8911118 | None:intergenic | 20.0% |
| !! | AACATTCATTCAATTATGTT+AGG | - | chr4_2:8911099-8911118 | Msa0587430:three_prime_UTR | 20.0% |
| !! | ATGTGATTATAATTATGATG+TGG | - | chr4_2:8911510-8911529 | Msa0587430:intron | 20.0% |
| !! | ATGAACACATTATGTATTAA+AGG | + | chr4_2:8911934-8911953 | None:intergenic | 20.0% |
| !! | TAATACATAATGTGTTCATT+TGG | - | chr4_2:8911935-8911954 | Msa0587430:intron | 20.0% |
| !! | AATACATAATGTGTTCATTT+GGG | - | chr4_2:8911936-8911955 | Msa0587430:intron | 20.0% |
| !! | AAAATGCATTTAATTACGAT+GGG | - | chr4_2:8912105-8912124 | Msa0587430:three_prime_UTR | 20.0% |
| !!! | TATCAAATGATATCTTTTGA+AGG | - | chr4_2:8912429-8912448 | Msa0587430:intron | 20.0% |
| !! | AATAAAAGCTTACAGAAATA+TGG | + | chr4_2:8912915-8912934 | None:intergenic | 20.0% |
| !!! | TTCTATAAGTGATTTTAACT+CGG | - | chr4_2:8913009-8913028 | Msa0587430:intron | 20.0% |
| !! | GTGAAACTAAGTATTTAAAT+TGG | - | chr4_2:8913042-8913061 | Msa0587430:intron | 20.0% |
| !! | ATATACTTTAGATCCTAAAT+TGG | + | chr4_2:8913312-8913331 | None:intergenic | 20.0% |
| !!! | GATAAGTTTTCATATACTTT+AGG | - | chr4_2:8913372-8913391 | Msa0587430:intron | 20.0% |
| !! | TAATAACTTAAGAGACTAAA+TGG | - | chr4_2:8913414-8913433 | Msa0587430:intron | 20.0% |
| !! | TTCAATCAAAATTGCATAAA+TGG | + | chr4_2:8913462-8913481 | None:intergenic | 20.0% |
| ! | ATAAAAAAGGAACCTTTATG+AGG | + | chr4_2:8910173-8910192 | None:intergenic | 25.0% |
| ! | TGGCAGATCTAATTTAATTA+GGG | - | chr4_2:8910318-8910337 | Msa0587430:intron | 25.0% |
| !!! | ATTAGGGTTTTTTATTTTGG+GGG | - | chr4_2:8910334-8910353 | Msa0587430:intron | 25.0% |
| ! | CTTTATAAAGTTACTATGAC+TGG | + | chr4_2:8910401-8910420 | None:intergenic | 25.0% |
| !!! | TGAGCTTAAAAATCACTTTT+TGG | - | chr4_2:8910651-8910670 | Msa0587430:three_prime_UTR | 25.0% |
| !!! | AAATCACTTTTTGGAAGTAA+AGG | - | chr4_2:8910660-8910679 | Msa0587430:intron | 25.0% |
| !!! | CATATGTTTGGTTTCAATTT+TGG | - | chr4_2:8910703-8910722 | Msa0587430:intron | 25.0% |
| !!! | GATTTTAGCCATAAGTTTAT+TGG | - | chr4_2:8910823-8910842 | Msa0587430:intron | 25.0% |
| !! | AAATTGATTTCGGTATGTTT+GGG | + | chr4_2:8911035-8911054 | None:intergenic | 25.0% |
| !! | AAAATTGATTTCGGTATGTT+TGG | + | chr4_2:8911036-8911055 | None:intergenic | 25.0% |
| ! | ATTATGTATTAAAGGAAGCA+TGG | + | chr4_2:8911926-8911945 | None:intergenic | 25.0% |
| ! | ATACATAATGTGTTCATTTG+GGG | - | chr4_2:8911937-8911956 | Msa0587430:intron | 25.0% |
| ! | TGTAAACGATGATAACATTA+AGG | - | chr4_2:8911970-8911989 | Msa0587430:intron | 25.0% |
| ! | GAAAATGCATTTAATTACGA+TGG | - | chr4_2:8912104-8912123 | Msa0587430:three_prime_UTR | 25.0% |
| !!! | AGTCAGTATGCATTTATTTT+GGG | + | chr4_2:8912180-8912199 | None:intergenic | 25.0% |
| !! | AAGTCAGTATGCATTTATTT+TGG | + | chr4_2:8912181-8912200 | None:intergenic | 25.0% |
| !! | AGGCAGTTTTTGAATAAATA+GGG | + | chr4_2:8912216-8912235 | None:intergenic | 25.0% |
| !! | TAGGCAGTTTTTGAATAAAT+AGG | + | chr4_2:8912217-8912236 | None:intergenic | 25.0% |
| ! | CTAAGTTTCATGTAAATTGT+TGG | - | chr4_2:8912601-8912620 | Msa0587430:intron | 25.0% |
| ! | ATGACTAATGGTCATTATAT+AGG | + | chr4_2:8912676-8912695 | None:intergenic | 25.0% |
| !!! | ATGAAAATATTTTTGGCTAC+AGG | - | chr4_2:8912715-8912734 | Msa0587430:intron | 25.0% |
| ! | GATGTTATTCACCTTAATTT+AGG | + | chr4_2:8912820-8912839 | None:intergenic | 25.0% |
| ! | TTCCAATAGAATTAATCCAA+CGG | + | chr4_2:8912847-8912866 | None:intergenic | 25.0% |
| !!! | TTCTGTAATTTTGTTTGTGT+TGG | - | chr4_2:8912876-8912895 | Msa0587430:intron | 25.0% |
| !!! | TCTGTAATTTTGTTTGTGTT+GGG | - | chr4_2:8912877-8912896 | Msa0587430:intron | 25.0% |
| ! | CACTTATAGAAGATAACTTA+CGG | + | chr4_2:8913000-8913019 | None:intergenic | 25.0% |
| ! | TTCTTTAGACACTAAATTGA+TGG | + | chr4_2:8913280-8913299 | None:intergenic | 25.0% |
| ! | TAAGTATTTCCTGAAATGTT+CGG | - | chr4_2:8913340-8913359 | Msa0587430:intron | 25.0% |
| !! | ATATACTTTAGGGACTAAAT+TGG | - | chr4_2:8913383-8913402 | Msa0587430:intron | 25.0% |
| !!! | TATTAATCAGTTTTGATAGG+AGG | + | chr4_2:8913505-8913524 | None:intergenic | 25.0% |
| ! | TCCTATCAAAACTGATTAAT+AGG | - | chr4_2:8913504-8913523 | Msa0587430:exon | 25.0% |
| !!! | TCCTATTAATCAGTTTTGAT+AGG | + | chr4_2:8913508-8913527 | None:intergenic | 25.0% |
| ! | CAAAACTGATTAATAGGAAA+TGG | - | chr4_2:8913510-8913529 | Msa0587430:exon | 25.0% |
| ! | CAAGAACTACAATTATTTCA+TGG | + | chr4_2:8913623-8913642 | None:intergenic | 25.0% |
| !! | CTTTATTTAATTGATTGTCC+TGG | - | chr4_2:8913755-8913774 | Msa0587430:CDS | 25.0% |
| ! | AGAGAGAAAGTGCATAAAAA+AGG | + | chr4_2:8910186-8910205 | None:intergenic | 30.0% |
| !!! | TTTTAGGATTGCTTTGCAAT+TGG | - | chr4_2:8910257-8910276 | Msa0587430:three_prime_UTR | 30.0% |
| TTTCTCTTCAATTTCGATTG+TGG | - | chr4_2:8910298-8910317 | Msa0587430:three_prime_UTR | 30.0% | |
| GTGGCAGATCTAATTTAATT+AGG | - | chr4_2:8910317-8910336 | Msa0587430:intron | 30.0% | |
| TTTCAGATACTACATGCATA+TGG | - | chr4_2:8910359-8910378 | Msa0587430:intron | 30.0% | |
| TTCAGATACTACATGCATAT+GGG | - | chr4_2:8910360-8910379 | Msa0587430:intron | 30.0% | |
| AGAAACCCAAAAAGCTAAAA+AGG | + | chr4_2:8910458-8910477 | None:intergenic | 30.0% | |
| ! | TACCTTTTTCTCTTGAAGAT+GGG | - | chr4_2:8910514-8910533 | Msa0587430:intron | 30.0% |
| ! | TAGGAAGTTGTGTATTTTTC+TGG | - | chr4_2:8910569-8910588 | Msa0587430:intron | 30.0% |
| ! | AGGAAGTTGTGTATTTTTCT+GGG | - | chr4_2:8910570-8910589 | Msa0587430:intron | 30.0% |
| TACAAGTCTTAGCATATGTT+TGG | - | chr4_2:8910691-8910710 | Msa0587430:intron | 30.0% | |
| !! | ATGTTTGGTTTCAATTTTGG+AGG | - | chr4_2:8910706-8910725 | Msa0587430:intron | 30.0% |
| !! | TGTTTGGTTTCAATTTTGGA+GGG | - | chr4_2:8910707-8910726 | Msa0587430:intron | 30.0% |
| TGCTAAAGAATCAATTCTCT+AGG | - | chr4_2:8910983-8911002 | Msa0587430:intron | 30.0% | |
| GCTAAAGAATCAATTCTCTA+GGG | - | chr4_2:8910984-8911003 | Msa0587430:intron | 30.0% | |
| ! | TAAGTTTACCGAATCACTTT+TGG | - | chr4_2:8911055-8911074 | Msa0587430:three_prime_UTR | 30.0% |
| ! | AATGTTTGGATTGACCTTTT+AGG | + | chr4_2:8911085-8911104 | None:intergenic | 30.0% |
| TTTCTTATCCCAAAATCGAT+CGG | + | chr4_2:8911170-8911189 | None:intergenic | 30.0% | |
| GGATAAGAAATTGATGTGTT+TGG | - | chr4_2:8911180-8911199 | Msa0587430:intron | 30.0% | |
| ! | ATTGATGTGTTTGGTAGTAT+TGG | - | chr4_2:8911189-8911208 | Msa0587430:intron | 30.0% |
| AATATAGCATTATCGCATAG+CGG | + | chr4_2:8911252-8911271 | None:intergenic | 30.0% | |
| CATGATTTACAAATTCAGAG+GGG | + | chr4_2:8911798-8911817 | None:intergenic | 30.0% | |
| CCATGATTTACAAATTCAGA+GGG | + | chr4_2:8911799-8911818 | None:intergenic | 30.0% | |
| ACCATGATTTACAAATTCAG+AGG | + | chr4_2:8911800-8911819 | None:intergenic | 30.0% | |
| !! | ACTTAATTGCTTTTGTTGTG+CGG | - | chr4_2:8911822-8911841 | Msa0587430:intron | 30.0% |
| TACATAATGTGTTCATTTGG+GGG | - | chr4_2:8911938-8911957 | Msa0587430:intron | 30.0% | |
| ! | TTGGGGACTAAATATTGATT+GGG | + | chr4_2:8912162-8912181 | None:intergenic | 30.0% |
| TTTGGGGACTAAATATTGAT+TGG | + | chr4_2:8912163-8912182 | None:intergenic | 30.0% | |
| !!! | GTCAGTATGCATTTATTTTG+GGG | + | chr4_2:8912179-8912198 | None:intergenic | 30.0% |
| !!! | AGCATTTTTCTAAAGTCGTT+AGG | + | chr4_2:8912277-8912296 | None:intergenic | 30.0% |
| ! | TTCTTCATGTACTTTCCTTT+TGG | - | chr4_2:8912466-8912485 | Msa0587430:intron | 30.0% |
| ! | TCTTCATGTACTTTCCTTTT+GGG | - | chr4_2:8912467-8912486 | Msa0587430:intron | 30.0% |
| ACACAATCATTTGTGAAATG+TGG | - | chr4_2:8912492-8912511 | Msa0587430:intron | 30.0% | |
| GATCAAATAGAAGATTCAGT+AGG | + | chr4_2:8912554-8912573 | None:intergenic | 30.0% | |
| AAGAGAACAAAATGCAAAAC+TGG | + | chr4_2:8912627-8912646 | None:intergenic | 30.0% | |
| TAATTCTATGGAATCAGACT+CGG | - | chr4_2:8912740-8912759 | Msa0587430:intron | 30.0% | |
| AATTACGAGAGCCTAAATTA+AGG | - | chr4_2:8912806-8912825 | Msa0587430:intron | 30.0% | |
| AAAGCCAAAAAAATTTGGCA+AGG | + | chr4_2:8913160-8913179 | None:intergenic | 30.0% | |
| ACTGCAAAGCCAAAAAAATT+TGG | + | chr4_2:8913165-8913184 | None:intergenic | 30.0% | |
| !!! | AATTTTTTTGGCTTTGCAGT+TGG | - | chr4_2:8913165-8913184 | Msa0587430:intron | 30.0% |
| AAGTATTTCCTGAAATGTTC+GGG | - | chr4_2:8913341-8913360 | Msa0587430:intron | 30.0% | |
| ! | TAGATTTTCTTGTGGACATT+TGG | - | chr4_2:8913533-8913552 | Msa0587430:CDS | 30.0% |
| ! | AGATTTTCTTGTGGACATTT+GGG | - | chr4_2:8913534-8913553 | Msa0587430:CDS | 30.0% |
| ! | AGAGAGAAATTACACTCTTT+TGG | + | chr4_2:8913709-8913728 | None:intergenic | 30.0% |
| ! | GATAGGTTTTCTTTCTCTTC+AGG | + | chr4_2:8910122-8910141 | None:intergenic | 35.0% |
| AGAGAAAGAAAACCTATCGT+CGG | - | chr4_2:8910124-8910143 | Msa0587430:three_prime_UTR | 35.0% | |
| TTATGAGGTGAAGATTGTGT+CGG | + | chr4_2:8910158-8910177 | None:intergenic | 35.0% | |
| ACACAATCTTCACCTCATAA+AGG | - | chr4_2:8910158-8910177 | Msa0587430:three_prime_UTR | 35.0% | |
| TCAGATACTACATGCATATG+GGG | - | chr4_2:8910361-8910380 | Msa0587430:intron | 35.0% | |
| ! | GTACCTTTTTCTCTTGAAGA+TGG | - | chr4_2:8910513-8910532 | Msa0587430:intron | 35.0% |
| AACCCATCTTCAAGAGAAAA+AGG | + | chr4_2:8910519-8910538 | None:intergenic | 35.0% | |
| TCATTCTGTTTCAGGAATGA+AGG | - | chr4_2:8910545-8910564 | Msa0587430:intron | 35.0% | |
| AGCATAAAGCTGTGTATGTT+TGG | + | chr4_2:8910967-8910986 | None:intergenic | 35.0% | |
| TAGGAGAACCAAAAGTGATT+CGG | + | chr4_2:8911066-8911085 | None:intergenic | 35.0% | |
| !!! | TCACTTTTGGTTCTCCTAAA+AGG | - | chr4_2:8911068-8911087 | Msa0587430:three_prime_UTR | 35.0% |
| ATAATGCTATATTGCCGCTA+TGG | - | chr4_2:8911259-8911278 | Msa0587430:intron | 35.0% | |
| CATTCATCCAAATTCAGCTA+CGG | - | chr4_2:8911340-8911359 | Msa0587430:intron | 35.0% | |
| ATAGCGACTATTTGACAACA+CGG | - | chr4_2:8911372-8911391 | Msa0587430:intron | 35.0% | |
| CAACTGTAGCTGAATTTGAA+CGG | + | chr4_2:8911420-8911439 | None:intergenic | 35.0% | |
| ! | AACACTTGTGTGGATTATGA+TGG | - | chr4_2:8911466-8911485 | Msa0587430:intron | 35.0% |
| GTTGTGTTGGATGCTATAAA+AGG | - | chr4_2:8911572-8911591 | Msa0587430:intron | 35.0% | |
| CAGAAATCTTCTGATGTACT+GGG | + | chr4_2:8911664-8911683 | None:intergenic | 35.0% | |
| AAGTCTAACTAATCAAGCTG+TGG | - | chr4_2:8911747-8911766 | Msa0587430:intron | 35.0% | |
| CCCTCTGAATTTGTAAATCA+TGG | - | chr4_2:8911796-8911815 | Msa0587430:intron | 35.0% | |
| CCAAGACTCTCAAATTTCTT+GGG | + | chr4_2:8912133-8912152 | None:intergenic | 35.0% | |
| CCAAGAAATTTGAGAGTCTT+GGG | - | chr4_2:8912131-8912150 | Msa0587430:three_prime_UTR | 35.0% | |
| TAGGCAGCAGTTATTATGTT+AGG | + | chr4_2:8912236-8912255 | None:intergenic | 35.0% | |
| AAGATATATCGGATGCATGT+TGG | - | chr4_2:8912339-8912358 | Msa0587430:intron | 35.0% | |
| ! | GTTGGTGCTCATATATGAAA+TGG | - | chr4_2:8912357-8912376 | Msa0587430:intron | 35.0% |
| ATGAAATGGTTTGAGCAACA+TGG | - | chr4_2:8912371-8912390 | Msa0587430:intron | 35.0% | |
| AAATGATTGTGTAGCCCAAA+AGG | + | chr4_2:8912484-8912503 | None:intergenic | 35.0% | |
| CTTGAAAGTGAGATGACTAA+TGG | + | chr4_2:8912688-8912707 | None:intergenic | 35.0% | |
| ATAGAATTAATCCAACGGCA+AGG | + | chr4_2:8912842-8912861 | None:intergenic | 35.0% | |
| TGCCGTTGGATTAATTCTAT+TGG | - | chr4_2:8912842-8912861 | Msa0587430:intron | 35.0% | |
| ATTGTGTACCAAAGACATTG+TGG | - | chr4_2:8912955-8912974 | Msa0587430:intron | 35.0% | |
| AATTATAAGATGTCCGCATG+AGG | - | chr4_2:8913067-8913086 | Msa0587430:intron | 35.0% | |
| !!! | AGTGCCTTGCCAAATTTTTT+TGG | - | chr4_2:8913153-8913172 | Msa0587430:intron | 35.0% |
| AGAATCACTCTCTCCAATTT+AGG | - | chr4_2:8913296-8913315 | Msa0587430:intron | 35.0% | |
| ! | GGAAATGGTAGATTTTCTTG+TGG | - | chr4_2:8913525-8913544 | Msa0587430:CDS | 35.0% |
| CATGGATCAAACAAACCAAA+CGG | + | chr4_2:8913605-8913624 | None:intergenic | 35.0% | |
| ATTGTAGTTCTTGCTTCTGT+AGG | - | chr4_2:8913630-8913649 | Msa0587430:intron | 35.0% | |
| ! | TTTTCAAAACTTGCCTCTTG+TGG | + | chr4_2:8913795-8913814 | None:intergenic | 35.0% |
| ! | TGAAGAGATGGGATTGCTTT+TGG | + | chr4_2:8910092-8910111 | None:intergenic | 40.0% |
| !! | TTTCTCTTGAAGATGGGTTG+TGG | - | chr4_2:8910520-8910539 | Msa0587430:intron | 40.0% |
| TTGTGGAGTCATTCTGTTTC+AGG | - | chr4_2:8910537-8910556 | Msa0587430:intron | 40.0% | |
| CTGTTTCAGGAATGAAGGAT+AGG | - | chr4_2:8910550-8910569 | Msa0587430:intron | 40.0% | |
| !! | GTTTGGTAGTATTGGCAACA+CGG | - | chr4_2:8911197-8911216 | Msa0587430:intron | 40.0% |
| ATGTCAAATAGCAGCCATAG+CGG | + | chr4_2:8911276-8911295 | None:intergenic | 40.0% | |
| CACTAAACCGTAGCTGAATT+TGG | + | chr4_2:8911350-8911369 | None:intergenic | 40.0% | |
| CGTTCAAATTCAGCTACAGT+TGG | - | chr4_2:8911418-8911437 | Msa0587430:intron | 40.0% | |
| ! | TCCACACAAGTGTTGCTAAA+CGG | + | chr4_2:8911460-8911479 | None:intergenic | 40.0% |
| ! | TGTGATTTGTAACAGAGCAG+TGG | - | chr4_2:8911550-8911569 | Msa0587430:intron | 40.0% |
| TGTTGGATGCTATAAAAGGC+CGG | - | chr4_2:8911576-8911595 | Msa0587430:intron | 40.0% | |
| ! | TGTTTTGTCAACCCTGTTGT+TGG | + | chr4_2:8911622-8911641 | None:intergenic | 40.0% |
| ACAACAGGGTTGACAAAACA+AGG | - | chr4_2:8911622-8911641 | Msa0587430:intron | 40.0% | |
| AGGGTTGACAAAACAAGGTA+AGG | - | chr4_2:8911627-8911646 | Msa0587430:intron | 40.0% | |
| CCAGAAATCTTCTGATGTAC+TGG | + | chr4_2:8911665-8911684 | None:intergenic | 40.0% | |
| CCAGTACATCAGAAGATTTC+TGG | - | chr4_2:8911662-8911681 | Msa0587430:intron | 40.0% | |
| ! | AACAGTGCTGTTCAATCACA+AGG | - | chr4_2:8911709-8911728 | Msa0587430:intron | 40.0% |
| ! | ACAGTGCTGTTCAATCACAA+GGG | - | chr4_2:8911710-8911729 | Msa0587430:intron | 40.0% |
| TACAAATTCAGAGGGGTTGT+TGG | + | chr4_2:8911791-8911810 | None:intergenic | 40.0% | |
| ATAATGTGTTCATTTGGGGG+TGG | - | chr4_2:8911941-8911960 | Msa0587430:intron | 40.0% | |
| TAATGTGTTCATTTGGGGGT+GGG | - | chr4_2:8911942-8911961 | Msa0587430:intron | 40.0% | |
| ! | ATATAAGGGTGTGTTAGGGA+GGG | + | chr4_2:8912026-8912045 | None:intergenic | 40.0% |
| ! | TATATAAGGGTGTGTTAGGG+AGG | + | chr4_2:8912027-8912046 | None:intergenic | 40.0% |
| TCCCTAACACACCCTTATAT+AGG | - | chr4_2:8912026-8912045 | Msa0587430:intron | 40.0% | |
| ! | CCCTATATAAGGGTGTGTTA+GGG | + | chr4_2:8912030-8912049 | None:intergenic | 40.0% |
| CCCTAACACACCCTTATATA+GGG | - | chr4_2:8912027-8912046 | Msa0587430:intron | 40.0% | |
| CCTAACACACCCTTATATAG+GGG | - | chr4_2:8912028-8912047 | Msa0587430:intron | 40.0% | |
| CTAACACACCCTTATATAGG+GGG | - | chr4_2:8912029-8912048 | Msa0587430:intron | 40.0% | |
| TAACACACCCTTATATAGGG+GGG | - | chr4_2:8912030-8912049 | Msa0587430:intron | 40.0% | |
| CCCAAGAAATTTGAGAGTCT+TGG | - | chr4_2:8912130-8912149 | Msa0587430:three_prime_UTR | 40.0% | |
| CCCAAGACTCTCAAATTTCT+TGG | + | chr4_2:8912134-8912153 | None:intergenic | 40.0% | |
| GCTGCAGTTATTGTGTGATT+AGG | + | chr4_2:8912255-8912274 | None:intergenic | 40.0% | |
| TAACATGTTCCCTTAGAGCA+CGG | - | chr4_2:8912311-8912330 | Msa0587430:intron | 40.0% | |
| ! | GTAGGCAAAAGCACATGAAT+AGG | + | chr4_2:8912536-8912555 | None:intergenic | 40.0% |
| TGGCTACAGGTCTAATTCTA+TGG | - | chr4_2:8912728-8912747 | Msa0587430:intron | 40.0% | |
| AATTGTTGCGTTCGATTCTC+AGG | + | chr4_2:8912790-8912809 | None:intergenic | 40.0% | |
| GTACCAAAGACATTGTGGTT+AGG | - | chr4_2:8912960-8912979 | Msa0587430:intron | 40.0% | |
| ATGTTAGTCCCGAACATTTC+AGG | + | chr4_2:8913352-8913371 | None:intergenic | 40.0% | |
| TTCTTGCTTCTGTAGGAACA+GGG | - | chr4_2:8913637-8913656 | Msa0587430:intron | 40.0% | |
| AGAGTGTAATTTCTCTCTGC+AGG | - | chr4_2:8913711-8913730 | Msa0587430:CDS | 40.0% | |
| CAGGTCTGATGTGAAGAGAT+GGG | + | chr4_2:8910103-8910122 | None:intergenic | 45.0% | |
| TCAGGTCTGATGTGAAGAGA+TGG | + | chr4_2:8910104-8910123 | None:intergenic | 45.0% | |
| TCGGTAATGAAACCGACGAT+AGG | + | chr4_2:8910139-8910158 | None:intergenic | 45.0% | |
| AGGGTCAAGAGTGATTCTAG+AGG | - | chr4_2:8910726-8910745 | Msa0587430:intron | 45.0% | |
| GCTGTGTATGTTTGGTACTG+TGG | + | chr4_2:8910959-8910978 | None:intergenic | 45.0% | |
| !! | AGCTTACGCCGATCGATTTT+GGG | - | chr4_2:8911159-8911178 | Msa0587430:intron | 45.0% |
| ACACGGATCGTGGAAAATAG+TGG | - | chr4_2:8911214-8911233 | Msa0587430:intron | 45.0% | |
| ! | ACACAAGTGTTGCTAAACGG+TGG | + | chr4_2:8911457-8911476 | None:intergenic | 45.0% |
| ACCGTTTAGCAACACTTGTG+TGG | - | chr4_2:8911456-8911475 | Msa0587430:intron | 45.0% | |
| TAACAGAGCAGTGGTTGTGT+TGG | - | chr4_2:8911559-8911578 | Msa0587430:intron | 45.0% | |
| ACTTCCACAGTAACTAGTGC+CGG | + | chr4_2:8911598-8911617 | None:intergenic | 45.0% | |
| !! | ACTGTGGAAGTACCAACAAC+AGG | - | chr4_2:8911607-8911626 | Msa0587430:intron | 45.0% |
| !! | CTGTGGAAGTACCAACAACA+GGG | - | chr4_2:8911608-8911627 | Msa0587430:intron | 45.0% |
| GACAAAACAAGGTAAGGCAG+TGG | - | chr4_2:8911633-8911652 | Msa0587430:intron | 45.0% | |
| GTTGTTGGAAGAACTGGCAT+GGG | + | chr4_2:8911776-8911795 | None:intergenic | 45.0% | |
| ! | CCCCTATATAAGGGTGTGTT+AGG | + | chr4_2:8912031-8912050 | None:intergenic | 45.0% |
| AACACACCCTTATATAGGGG+GGG | - | chr4_2:8912031-8912050 | Msa0587430:intron | 45.0% | |
| AACATGTTCCCTTAGAGCAC+GGG | - | chr4_2:8912312-8912331 | Msa0587430:intron | 45.0% | |
| GCACGGGTAGCAAGATATAT+CGG | - | chr4_2:8912328-8912347 | Msa0587430:intron | 45.0% | |
| GTGAATAACATCCTTGCCGT+TGG | - | chr4_2:8912828-8912847 | Msa0587430:intron | 45.0% | |
| CAGCCTAACCACAATGTCTT+TGG | + | chr4_2:8912966-8912985 | None:intergenic | 45.0% | |
| TAAAGCCTATCTGCCTCATG+CGG | + | chr4_2:8913083-8913102 | None:intergenic | 45.0% | |
| ! | AGTTGATGCTTACAGCGAGA+GGG | + | chr4_2:8913244-8913263 | None:intergenic | 45.0% |
| !! | AAGTTGATGCTTACAGCGAG+AGG | + | chr4_2:8913245-8913264 | None:intergenic | 45.0% |
| TCTTGTGGACATTTGGGAAC+AGG | - | chr4_2:8913540-8913559 | Msa0587430:CDS | 45.0% | |
| GTTCTTGCTTCTGTAGGAAC+AGG | - | chr4_2:8913636-8913655 | Msa0587430:intron | 45.0% | |
| TCTTGCTTCTGTAGGAACAG+GGG | - | chr4_2:8913638-8913657 | Msa0587430:intron | 45.0% | |
| TGATTGTCCTGGTTTCTCTC+TGG | - | chr4_2:8913766-8913785 | Msa0587430:CDS | 45.0% | |
| TTCTCTCTGGTATCCACAAG+AGG | - | chr4_2:8913779-8913798 | Msa0587430:CDS | 45.0% | |
| !!! | TTATTTTTTTTTTCAATTTT+AGG | - | chr4_2:8910241-8910260 | Msa0587430:three_prime_UTR | 5.0% |
| !! | CAGCTTACGCCGATCGATTT+TGG | - | chr4_2:8911158-8911177 | Msa0587430:intron | 50.0% |
| !! | AGTATTGGCAACACGGATCG+TGG | - | chr4_2:8911204-8911223 | Msa0587430:intron | 50.0% |
| GACCACAAGCACGCATGATA+TGG | - | chr4_2:8911684-8911703 | Msa0587430:intron | 50.0% | |
| GTCCATATCATGCGTGCTTG+TGG | + | chr4_2:8911689-8911708 | None:intergenic | 50.0% | |
| GGTTGTTGGAAGAACTGGCA+TGG | + | chr4_2:8911777-8911796 | None:intergenic | 50.0% | |
| AGAGGGGTTGTTGGAAGAAC+TGG | + | chr4_2:8911782-8911801 | None:intergenic | 50.0% | |
| GGAGGTTTAGGAGAGGCTAA+TGG | + | chr4_2:8912005-8912024 | None:intergenic | 50.0% | |
| TGTGTTAGGGAGGGAGGTTT+AGG | + | chr4_2:8912017-8912036 | None:intergenic | 50.0% | |
| ACACACCCTTATATAGGGGG+GGG | - | chr4_2:8912032-8912051 | Msa0587430:intron | 50.0% | |
| TCTTGCTACCCGTGCTCTAA+GGG | + | chr4_2:8912323-8912342 | None:intergenic | 50.0% | |
| ATCTTGCTACCCGTGCTCTA+AGG | + | chr4_2:8912324-8912343 | None:intergenic | 50.0% | |
| ATGCTTACAGCGAGAGGGAT+AGG | + | chr4_2:8913239-8913258 | None:intergenic | 50.0% | |
| GTGGACATTTGGGAACAGGA+TGG | - | chr4_2:8913544-8913563 | Msa0587430:CDS | 50.0% | |
| CTTCAACGGCTCAGTCATAC+AGG | + | chr4_2:8913570-8913589 | None:intergenic | 50.0% | |
| CTGTATGACTGAGCCGTTGA+AGG | - | chr4_2:8913568-8913587 | Msa0587430:CDS | 50.0% | |
| GGCACATCCTCAACCTTCAA+CGG | + | chr4_2:8913584-8913603 | None:intergenic | 50.0% | |
| ! | AAGGTTGAGGATGTGCCGTT+TGG | - | chr4_2:8913587-8913606 | Msa0587430:intron | 50.0% |
| CTTGCTTCTGTAGGAACAGG+GGG | - | chr4_2:8913639-8913658 | Msa0587430:intron | 50.0% | |
| TTCTGTAGGAACAGGGGGAA+GGG | - | chr4_2:8913644-8913663 | Msa0587430:intron | 50.0% | |
| GTGGATACCAGAGAGAAACC+AGG | + | chr4_2:8913776-8913795 | None:intergenic | 50.0% | |
| AAGGCCGGCACTAGTTACTG+TGG | - | chr4_2:8911591-8911610 | Msa0587430:intron | 55.0% | |
| TAGGGAGGGAGGTTTAGGAG+AGG | + | chr4_2:8912012-8912031 | None:intergenic | 55.0% | |
| ! | TAAGGGTGTGTTAGGGAGGG+AGG | + | chr4_2:8912023-8912042 | None:intergenic | 55.0% |
| CACACCCTTATATAGGGGGG+GGG | - | chr4_2:8912033-8912052 | Msa0587430:intron | 55.0% | |
| ACACCCTTATATAGGGGGGG+GGG | - | chr4_2:8912034-8912053 | Msa0587430:intron | 55.0% | |
| GAATCAGACTCGGCAGCGTT+GGG | - | chr4_2:8912750-8912769 | Msa0587430:intron | 55.0% | |
| GATGTCCGCATGAGGCAGAT+AGG | - | chr4_2:8913075-8913094 | Msa0587430:intron | 55.0% | |
| AGAGGGATAGGCTGACGGAA+TGG | + | chr4_2:8913227-8913246 | None:intergenic | 55.0% | |
| GACTGAGCCGTTGAAGGTTG+AGG | - | chr4_2:8913574-8913593 | Msa0587430:intron | 55.0% | |
| CTTCTGTAGGAACAGGGGGA+AGG | - | chr4_2:8913643-8913662 | Msa0587430:intron | 55.0% | |
| TCTGTAGGAACAGGGGGAAG+GGG | - | chr4_2:8913645-8913664 | Msa0587430:intron | 55.0% | |
| CACCCTTATATAGGGGGGGG+GGG | - | chr4_2:8912035-8912054 | Msa0587430:intron | 60.0% | |
| CTCCCCCCCCCCCTATATAA+GGG | + | chr4_2:8912040-8912059 | None:intergenic | 60.0% | |
| CTTATATAGGGGGGGGGGGA+GGG | - | chr4_2:8912039-8912058 | Msa0587430:three_prime_UTR | 60.0% | |
| TTATATAGGGGGGGGGGGAG+GGG | - | chr4_2:8912040-8912059 | Msa0587430:three_prime_UTR | 60.0% | |
| GGAATCAGACTCGGCAGCGT+TGG | - | chr4_2:8912749-8912768 | Msa0587430:intron | 60.0% | |
| CAGCGAGAGGGATAGGCTGA+CGG | + | chr4_2:8913232-8913251 | None:intergenic | 60.0% | |
| CCTCCCCCCCCCCCTATATA+AGG | + | chr4_2:8912041-8912060 | None:intergenic | 65.0% | |
| CCTTATATAGGGGGGGGGGG+AGG | - | chr4_2:8912038-8912057 | Msa0587430:three_prime_UTR | 65.0% | |
| TATATAGGGGGGGGGGGAGG+GGG | - | chr4_2:8912041-8912060 | Msa0587430:three_prime_UTR | 65.0% | |
| ! | CAGACTCGGCAGCGTTGGGT+TGG | - | chr4_2:8912754-8912773 | Msa0587430:intron | 65.0% |
| ATATAGGGGGGGGGGGAGGG+GGG | - | chr4_2:8912042-8912061 | Msa0587430:three_prime_UTR | 70.0% | |
| TATAGGGGGGGGGGGAGGGG+GGG | - | chr4_2:8912043-8912062 | Msa0587430:three_prime_UTR | 75.0% | |
| ! | ATAGGGGGGGGGGGAGGGGG+GGG | - | chr4_2:8912044-8912063 | Msa0587430:three_prime_UTR | 80.0% |
| ! | TAGGGGGGGGGGGAGGGGGG+GGG | - | chr4_2:8912045-8912064 | Msa0587430:three_prime_UTR | 85.0% |
| ! | AGGGGGGGGGGGAGGGGGGG+GGG | - | chr4_2:8912046-8912065 | Msa0587430:three_prime_UTR | 90.0% |
| ! | GGGGGGGGGGGAGGGGGGGG+GGG | - | chr4_2:8912047-8912066 | Msa0587430:three_prime_UTR | 95.0% |
| ! | GGGGGGGGGGAGGGGGGGGG+GGG | - | chr4_2:8912048-8912067 | Msa0587430:three_prime_UTR | 95.0% |
| ! | GGGGGGGGGAGGGGGGGGGG+GGG | - | chr4_2:8912049-8912068 | Msa0587430:three_prime_UTR | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 8910039 | 8913816 | 8910039 | ID=Msa0587430;Name=Msa0587430 |
| chr4_2 | mRNA | 8910039 | 8913816 | 8910039 | ID=Msa0587430-mRNA-1;Parent=Msa0587430;Name=Msa0587430-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|1|0.83|1|0.2|0.33|6|750|70 |
| chr4_2 | exon | 8910039 | 8910329 | 8910039 | ID=Msa0587430-mRNA-1:exon:2470;Parent=Msa0587430-mRNA-1 |
| chr4_2 | exon | 8910605 | 8910671 | 8910605 | ID=Msa0587430-mRNA-1:exon:2469;Parent=Msa0587430-mRNA-1 |
| chr4_2 | exon | 8911028 | 8911118 | 8911028 | ID=Msa0587430-mRNA-1:exon:2468;Parent=Msa0587430-mRNA-1 |
| chr4_2 | exon | 8912038 | 8912290 | 8912038 | ID=Msa0587430-mRNA-1:exon:2467;Parent=Msa0587430-mRNA-1 |
| chr4_2 | exon | 8913473 | 8913592 | 8913473 | ID=Msa0587430-mRNA-1:exon:2466;Parent=Msa0587430-mRNA-1 |
| chr4_2 | exon | 8913676 | 8913816 | 8913676 | ID=Msa0587430-mRNA-1:exon:2465;Parent=Msa0587430-mRNA-1 |
| chr4_2 | CDS | 8913676 | 8913816 | 8913676 | ID=Msa0587430-mRNA-1:cds;Parent=Msa0587430-mRNA-1 |
| chr4_2 | CDS | 8913521 | 8913592 | 8913521 | ID=Msa0587430-mRNA-1:cds;Parent=Msa0587430-mRNA-1 |
| chr4_2 | three_prime_UTR | 8913473 | 8913520 | 8913473 | ID=Msa0587430-mRNA-1:three_prime_utr;Parent=Msa0587430-mRNA-1 |
| chr4_2 | three_prime_UTR | 8912038 | 8912290 | 8912038 | ID=Msa0587430-mRNA-1:three_prime_utr;Parent=Msa0587430-mRNA-1 |
| chr4_2 | three_prime_UTR | 8911028 | 8911118 | 8911028 | ID=Msa0587430-mRNA-1:three_prime_utr;Parent=Msa0587430-mRNA-1 |
| chr4_2 | three_prime_UTR | 8910605 | 8910671 | 8910605 | ID=Msa0587430-mRNA-1:three_prime_utr;Parent=Msa0587430-mRNA-1 |
| chr4_2 | three_prime_UTR | 8910039 | 8910329 | 8910039 | ID=Msa0587430-mRNA-1:three_prime_utr;Parent=Msa0587430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
