Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0651870 | XP_003608019.2 | 100.000 | 101 | 0 | 0 | 1 | 101 | 354 | 454 | 3.28e-64 | 211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0651870 | sp|Q9LEB3|RBP47_NICPL | 60.784 | 102 | 39 | 1 | 1 | 101 | 315 | 416 | 5.82e-32 | 118 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0651870 | A0A396IDA7 | 100.000 | 101 | 0 | 0 | 1 | 101 | 354 | 454 | 1.57e-64 | 211 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007810 | Msa0651870 | -0.814520 | 1.477771e-51 | -8.615850e-47 |
| Msa0011920 | Msa0651870 | -0.823881 | 1.090673e-53 | -8.615850e-47 |
| Msa0024500 | Msa0651870 | -0.815860 | 7.445836e-52 | -8.615850e-47 |
| Msa0026780 | Msa0651870 | 0.865329 | 6.391676e-65 | -8.615850e-47 |
| Msa0034100 | Msa0651870 | -0.824035 | 1.003817e-53 | -8.615850e-47 |
| Msa0037180 | Msa0651870 | 0.803002 | 4.291011e-49 | -8.615850e-47 |
| Msa0037650 | Msa0651870 | -0.826287 | 2.947172e-54 | -8.615850e-47 |
| Msa0044010 | Msa0651870 | 0.845798 | 3.242788e-59 | -8.615850e-47 |
| Msa0053640 | Msa0651870 | 0.814034 | 1.891735e-51 | -8.615850e-47 |
| Msa0056230 | Msa0651870 | -0.802695 | 4.966270e-49 | -8.615850e-47 |
| Msa0059080 | Msa0651870 | 0.857034 | 2.148335e-62 | -8.615850e-47 |
| Msa0067590 | Msa0651870 | -0.802312 | 5.955964e-49 | -8.615850e-47 |
| Msa0075990 | Msa0651870 | -0.804745 | 1.863852e-49 | -8.615850e-47 |
| Msa0077320 | Msa0651870 | 0.840373 | 9.044129e-58 | -8.615850e-47 |
| Msa0077980 | Msa0651870 | 0.825378 | 4.844497e-54 | -8.615850e-47 |
| Msa0079320 | Msa0651870 | -0.806937 | 6.454866e-50 | -8.615850e-47 |
| Msa0091300 | Msa0651870 | -0.842233 | 2.930605e-58 | -8.615850e-47 |
| Msa0091730 | Msa0651870 | 0.823017 | 1.736582e-53 | -8.615850e-47 |
| Msa0092220 | Msa0651870 | 0.811555 | 6.602859e-51 | -8.615850e-47 |
| Msa0092480 | Msa0651870 | -0.812225 | 4.718621e-51 | -8.615850e-47 |
| Msa0097470 | Msa0651870 | -0.817672 | 2.920205e-52 | -8.615850e-47 |
| Msa0110240 | Msa0651870 | 0.808317 | 3.287120e-50 | -8.615850e-47 |
| Msa0603090 | Msa0651870 | 0.839206 | 1.819742e-57 | -8.615850e-47 |
| Msa0610240 | Msa0651870 | -0.806944 | 6.431155e-50 | -8.615850e-47 |
| Msa0616890 | Msa0651870 | -0.801840 | 7.448484e-49 | -8.615850e-47 |
| Msa0621670 | Msa0651870 | -0.843494 | 1.354103e-58 | -8.615850e-47 |
| Msa0626920 | Msa0651870 | 0.872871 | 2.279508e-67 | -8.615850e-47 |
| Msa0651870 | Msa0651890 | 0.999334 | 6.541105e-304 | -8.615850e-47 |
| Msa0651870 | Msa0660150 | 0.823532 | 1.316679e-53 | -8.615850e-47 |
| Msa0651870 | Msa0671300 | -0.805697 | 1.177722e-49 | -8.615850e-47 |
| Msa0651870 | Msa0676090 | -0.813830 | 2.098894e-51 | -8.615850e-47 |
| Msa0651870 | Msa0676310 | -0.812423 | 4.272098e-51 | -8.615850e-47 |
| Msa0651870 | Msa0683200 | -0.856174 | 3.845543e-62 | -8.615850e-47 |
| Msa0651870 | Msa0700410 | 0.863229 | 2.888898e-64 | -8.615850e-47 |
| Msa0651870 | Msa0701800 | -0.823890 | 1.085495e-53 | -8.615850e-47 |
| Msa0651870 | Msa0703430 | -0.807959 | 3.916980e-50 | -8.615850e-47 |
| Msa0651870 | Msa0707860 | -0.812279 | 4.591933e-51 | -8.615850e-47 |
| Msa0651870 | Msa0712860 | 0.800983 | 1.115588e-48 | -8.615850e-47 |
| Msa0651870 | Msa0720710 | 0.804591 | 2.007472e-49 | -8.615850e-47 |
| Msa0651870 | Msa0733240 | -0.801332 | 9.465488e-49 | -8.615850e-47 |
| Msa0651870 | Msa0742370 | -0.861052 | 1.345263e-63 | -8.615850e-47 |
| Msa0651870 | Msa0748480 | 0.835233 | 1.890703e-56 | -8.615850e-47 |
| Msa0651870 | Msa0752490 | -0.810773 | 9.757158e-51 | -8.615850e-47 |
| Msa0651870 | Msa0753270 | 0.805798 | 1.121804e-49 | -8.615850e-47 |
| Msa0651870 | Msa0756670 | -0.805745 | 1.150781e-49 | -8.615850e-47 |
| Msa0651870 | Msa0769910 | -0.806273 | 8.912280e-50 | -8.615850e-47 |
| Msa0651870 | Msa0779450 | -0.868639 | 5.624334e-66 | -8.615850e-47 |
| Msa0651870 | Msa0800480 | 0.801978 | 6.976021e-49 | -8.615850e-47 |
| Msa0651870 | Msa0801320 | -0.821110 | 4.805476e-53 | -8.615850e-47 |
| Msa0651870 | Msa0805390 | 0.825646 | 4.185065e-54 | -8.615850e-47 |
| Msa0651870 | Msa0807100 | -0.803195 | 3.914855e-49 | -8.615850e-47 |
| Msa0651870 | Msa0807870 | -0.827267 | 1.719530e-54 | -8.615850e-47 |
| Msa0651870 | Msa0812020 | -0.820544 | 6.486206e-53 | -8.615850e-47 |
| Msa0651870 | Msa0823480 | -0.803704 | 3.070778e-49 | -8.615850e-47 |
| Msa0651870 | Msa0829580 | 0.801503 | 8.730151e-49 | -8.615850e-47 |
| Msa0651870 | Msa0832520 | 0.820958 | 5.209564e-53 | -8.615850e-47 |
| Msa0651870 | Msa0844870 | -0.821714 | 3.486515e-53 | -8.615850e-47 |
| Msa0651870 | Msa0844970 | -0.834096 | 3.652701e-56 | -8.615850e-47 |
| Msa0651870 | Msa0862480 | -0.844307 | 8.197508e-59 | -8.615850e-47 |
| Msa0651870 | Msa0925630 | -0.818956 | 1.495589e-52 | -8.615850e-47 |
| Msa0651870 | Msa0931550 | -0.851654 | 7.711452e-61 | -8.615850e-47 |
| Msa0651870 | Msa0967900 | -0.805755 | 1.145395e-49 | -8.615850e-47 |
| Msa0651870 | Msa0969380 | 0.849296 | 3.541051e-60 | -8.615850e-47 |
| Msa0651870 | Msa0969590 | 0.885878 | 5.560741e-72 | -8.615850e-47 |
| Msa0651870 | Msa0969720 | 0.846929 | 1.594889e-59 | -8.615850e-47 |
| Msa0651870 | Msa1002970 | -0.820972 | 5.170705e-53 | -8.615850e-47 |
| Msa0651870 | Msa1004410 | -0.805923 | 1.056030e-49 | -8.615850e-47 |
| Msa0651870 | Msa1014550 | -0.805696 | 1.178429e-49 | -8.615850e-47 |
| Msa0651870 | Msa1026970 | 0.809992 | 1.438323e-50 | -8.615850e-47 |
| Msa0651870 | Msa1029570 | -0.812449 | 4.215630e-51 | -8.615850e-47 |
| Msa0651870 | Msa1039440 | -0.839395 | 1.625506e-57 | -8.615850e-47 |
| Msa0651870 | Msa1055520 | -0.820631 | 6.194053e-53 | -8.615850e-47 |
| Msa0651870 | Msa1078590 | -0.806777 | 6.977495e-50 | -8.615850e-47 |
| Msa0651870 | Msa1078760 | -0.812039 | 5.181640e-51 | -8.615850e-47 |
| Msa0651870 | Msa1087890 | 0.820229 | 7.659608e-53 | -8.615850e-47 |
| Msa0651870 | Msa1088400 | -0.818206 | 2.211948e-52 | -8.615850e-47 |
| Msa0651870 | Msa1093190 | -0.801834 | 7.467129e-49 | -8.615850e-47 |
| Msa0651870 | Msa1094810 | 0.821662 | 3.584444e-53 | -8.615850e-47 |
| Msa0651870 | Msa1112210 | -0.800914 | 1.152537e-48 | -8.615850e-47 |
| Msa0651870 | Msa1121720 | -0.803278 | 3.762673e-49 | -8.615850e-47 |
| Msa0651870 | Msa1133760 | 0.815862 | 7.436209e-52 | -8.615850e-47 |
| Msa0651870 | Msa1146980 | 0.805894 | 1.070942e-49 | -8.615850e-47 |
| Msa0651870 | Msa1147650 | 0.811924 | 5.488331e-51 | -8.615850e-47 |
| Msa0651870 | Msa1169590 | -0.804605 | 1.993385e-49 | -8.615850e-47 |
| Msa0651870 | Msa1197720 | 0.840330 | 9.278753e-58 | -8.615850e-47 |
| Msa0651870 | Msa1202470 | 0.834208 | 3.423917e-56 | -8.615850e-47 |
| Msa0651870 | Msa1202710 | -0.817731 | 2.831784e-52 | -8.615850e-47 |
| Msa0651870 | Msa1205270 | -0.824554 | 7.580295e-54 | -8.615850e-47 |
| Msa0651870 | Msa1207920 | -0.820223 | 7.685098e-53 | -8.615850e-47 |
| Msa0651870 | Msa1213180 | -0.830943 | 2.208735e-55 | -8.615850e-47 |
| Msa0651870 | Msa1213470 | -0.802683 | 4.993089e-49 | -8.615850e-47 |
| Msa0651870 | Msa1251410 | 0.871901 | 4.800966e-67 | -8.615850e-47 |
| Msa0651870 | Msa1254910 | 0.826599 | 2.482992e-54 | -8.615850e-47 |
| Msa0651870 | Msa1260520 | -0.826908 | 2.095554e-54 | -8.615850e-47 |
| Msa0651870 | Msa1267390 | -0.813404 | 2.604130e-51 | -8.615850e-47 |
| Msa0651870 | Msa1277260 | 0.800114 | 1.677438e-48 | -8.615850e-47 |
| Msa0651870 | Msa1300370 | -0.804178 | 2.446594e-49 | -8.615850e-47 |
| Msa0651870 | Msa1323260 | -0.804215 | 2.404139e-49 | -8.615850e-47 |
| Msa0651870 | Msa1326780 | -0.826944 | 2.053848e-54 | -8.615850e-47 |
| Msa0651870 | Msa1331570 | -0.814267 | 1.681022e-51 | -8.615850e-47 |
| Msa0651870 | Msa1352600 | -0.837204 | 5.967141e-57 | -8.615850e-47 |
| Msa0651870 | Msa1356100 | -0.802398 | 5.718914e-49 | -8.615850e-47 |
| Msa0651870 | Msa1357990 | 0.824245 | 8.958214e-54 | -8.615850e-47 |
| Msa0651870 | Msa1358470 | 0.823598 | 1.270706e-53 | -8.615850e-47 |
| Msa0651870 | Msa1360070 | -0.837482 | 5.064065e-57 | -8.615850e-47 |
| Msa0651870 | Msa1361670 | -0.802152 | 6.424974e-49 | -8.615850e-47 |
| Msa0651870 | Msa1363270 | -0.815521 | 8.859418e-52 | -8.615850e-47 |
| Msa0651870 | Msa1363280 | -0.883978 | 2.838959e-71 | -8.615850e-47 |
| Msa0651870 | Msa1363310 | -0.801110 | 1.050753e-48 | -8.615850e-47 |
| Msa0651870 | Msa1376660 | 0.810337 | 1.211914e-50 | -8.615850e-47 |
| Msa0651870 | Msa1377980 | -0.810687 | 1.018230e-50 | -8.615850e-47 |
| Msa0651870 | Msa1384410 | -0.803901 | 2.793726e-49 | -8.615850e-47 |
| Msa0651870 | Msa1385970 | 0.809345 | 1.981460e-50 | -8.615850e-47 |
| Msa0651870 | Msa1386580 | -0.802560 | 5.294543e-49 | -8.615850e-47 |
| Msa0651870 | Msa1396200 | -0.813711 | 2.228771e-51 | -8.615850e-47 |
| Msa0651870 | Msa1398450 | -0.826051 | 3.352971e-54 | -8.615850e-47 |
| Msa0651870 | Msa1400290 | -0.824035 | 1.003817e-53 | -8.615850e-47 |
| Msa0651870 | Msa1401640 | -0.801066 | 1.072788e-48 | -8.615850e-47 |
| Msa0651870 | Msa1403660 | 0.812561 | 3.985464e-51 | -8.615850e-47 |
| Msa0651870 | Msa1403940 | 0.827676 | 1.371588e-54 | -8.615850e-47 |
| Msa0651870 | Msa1408280 | -0.810825 | 9.509349e-51 | -8.615850e-47 |
| Msa0651870 | Msa1408860 | -0.803429 | 3.501627e-49 | -8.615850e-47 |
| Msa0651870 | Msa1414780 | -0.831862 | 1.311863e-55 | -8.615850e-47 |
| Msa0651870 | Msa1417110 | 0.815670 | 8.209355e-52 | -8.615850e-47 |
| Msa0651870 | Msa1429810 | 0.814582 | 1.431412e-51 | -8.615850e-47 |
| Msa0651870 | Msa1453430 | 0.850941 | 1.226136e-60 | -8.615850e-47 |
| Msa0651870 | Msa1457390 | -0.811037 | 8.551888e-51 | -8.615850e-47 |
| Msa0651870 | Msa1459130 | -0.823475 | 1.358135e-53 | -8.615850e-47 |
| Msa0651870 | Msa1462210 | -0.823080 | 1.678841e-53 | -8.615850e-47 |
| Msa0122530 | Msa0651870 | 0.832383 | 9.756093e-56 | -8.615850e-47 |
| Msa0128110 | Msa0651870 | -0.818496 | 1.901814e-52 | -8.615850e-47 |
| Msa0145430 | Msa0651870 | 0.812928 | 3.312362e-51 | -8.615850e-47 |
| Msa0148040 | Msa0651870 | 0.807728 | 4.386158e-50 | -8.615850e-47 |
| Msa0150330 | Msa0651870 | 0.860455 | 2.041626e-63 | -8.615850e-47 |
| Msa0173600 | Msa0651870 | -0.816843 | 4.485899e-52 | -8.615850e-47 |
| Msa0173950 | Msa0651870 | -0.805411 | 1.352141e-49 | -8.615850e-47 |
| Msa0186400 | Msa0651870 | -0.832938 | 7.102153e-56 | -8.615850e-47 |
| Msa0199620 | Msa0651870 | 0.809809 | 1.574558e-50 | -8.615850e-47 |
| Msa0206040 | Msa0651870 | -0.817981 | 2.487443e-52 | -8.615850e-47 |
| Msa0219280 | Msa0651870 | 0.819609 | 1.061735e-52 | -8.615850e-47 |
| Msa0220170 | Msa0651870 | 0.812630 | 3.848483e-51 | -8.615850e-47 |
| Msa0225070 | Msa0651870 | -0.806220 | 9.143891e-50 | -8.615850e-47 |
| Msa0233920 | Msa0651870 | 0.825005 | 5.934404e-54 | -8.615850e-47 |
| Msa0236690 | Msa0651870 | -0.801133 | 1.039596e-48 | -8.615850e-47 |
| Msa0238140 | Msa0651870 | 0.809884 | 1.517790e-50 | -8.615850e-47 |
| Msa0384590 | Msa0651870 | 0.852235 | 5.274609e-61 | -8.615850e-47 |
| Msa0387030 | Msa0651870 | 0.823403 | 1.411647e-53 | -8.615850e-47 |
| Msa0397130 | Msa0651870 | 0.807709 | 4.428300e-50 | -8.615850e-47 |
| Msa0434370 | Msa0651870 | 0.812201 | 4.775694e-51 | -8.615850e-47 |
| Msa0434660 | Msa0651870 | 0.839169 | 1.860721e-57 | -8.615850e-47 |
| Msa0460080 | Msa0651870 | -0.810908 | 9.120882e-51 | -8.615850e-47 |
| Msa0472930 | Msa0651870 | 0.800794 | 1.219236e-48 | -8.615850e-47 |
| Msa0238950 | Msa0651870 | 0.840418 | 8.802825e-58 | -8.615850e-47 |
| Msa0240590 | Msa0651870 | -0.803938 | 2.745684e-49 | -8.615850e-47 |
| Msa0261460 | Msa0651870 | 0.810081 | 1.376011e-50 | -8.615850e-47 |
| Msa0266140 | Msa0651870 | -0.812293 | 4.560067e-51 | -8.615850e-47 |
| Msa0294200 | Msa0651870 | 0.800247 | 1.576223e-48 | -8.615850e-47 |
| Msa0298400 | Msa0651870 | 0.817781 | 2.759423e-52 | -8.615850e-47 |
| Msa0304060 | Msa0651870 | -0.805529 | 1.277795e-49 | -8.615850e-47 |
| Msa0307380 | Msa0651870 | 0.881006 | 3.433511e-70 | -8.615850e-47 |
| Msa0308750 | Msa0651870 | 0.820189 | 7.823282e-53 | -8.615850e-47 |
| Msa0312640 | Msa0651870 | 0.818763 | 1.654537e-52 | -8.615850e-47 |
| Msa0316140 | Msa0651870 | 0.828803 | 7.336506e-55 | -8.615850e-47 |
| Msa0316740 | Msa0651870 | 0.821782 | 3.361899e-53 | -8.615850e-47 |
| Msa0334450 | Msa0651870 | -0.813454 | 2.538574e-51 | -8.615850e-47 |
| Msa0336120 | Msa0651870 | 0.811187 | 7.937115e-51 | -8.615850e-47 |
| Msa0339540 | Msa0651870 | 0.804502 | 2.094751e-49 | -8.615850e-47 |
| Msa0354970 | Msa0651870 | -0.833281 | 5.837099e-56 | -8.615850e-47 |
| Msa0355080 | Msa0651870 | -0.840442 | 8.675760e-58 | -8.615850e-47 |
| Msa0358470 | Msa0651870 | 0.804001 | 2.663808e-49 | -8.615850e-47 |
| Msa0491160 | Msa0651870 | -0.817671 | 2.922116e-52 | -8.615850e-47 |
| Msa0502900 | Msa0651870 | -0.802163 | 6.390527e-49 | -8.615850e-47 |
| Msa0522540 | Msa0651870 | 0.851505 | 8.496029e-61 | -8.615850e-47 |
| Msa0523420 | Msa0651870 | -0.838070 | 3.576510e-57 | -8.615850e-47 |
| Msa0523970 | Msa0651870 | 0.821016 | 5.051278e-53 | -8.615850e-47 |
| Msa0526490 | Msa0651870 | -0.858001 | 1.111205e-62 | -8.615850e-47 |
| Msa0526500 | Msa0651870 | -0.868156 | 8.047867e-66 | -8.615850e-47 |
| Msa0526520 | Msa0651870 | -0.803015 | 4.265362e-49 | -8.615850e-47 |
| Msa0533610 | Msa0651870 | -0.800065 | 1.716269e-48 | -8.615850e-47 |
| Msa0538050 | Msa0651870 | -0.802903 | 4.499060e-49 | -8.615850e-47 |
| Msa0548160 | Msa0651870 | -0.810181 | 1.309646e-50 | -8.615850e-47 |
| Msa0548420 | Msa0651870 | 0.809881 | 1.519726e-50 | -8.615850e-47 |
| Msa0559690 | Msa0651870 | -0.802334 | 5.895101e-49 | -8.615850e-47 |
| Msa0563440 | Msa0651870 | 0.938050 | 1.275230e-98 | -8.615850e-47 |
| Msa0566940 | Msa0651870 | -0.810875 | 9.273581e-51 | -8.615850e-47 |
| Msa0569580 | Msa0651870 | -0.840533 | 8.213571e-58 | -8.615850e-47 |
| Msa0569980 | Msa0651870 | -0.848010 | 8.047243e-60 | -8.615850e-47 |
| Msa0577690 | Msa0651870 | 0.846525 | 2.056311e-59 | -8.615850e-47 |
| Msa0578460 | Msa0651870 | 0.804624 | 1.975374e-49 | -8.615850e-47 |
| Msa0579080 | Msa0651870 | 0.817137 | 3.854252e-52 | -8.615850e-47 |
| Msa0587430 | Msa0651870 | 0.826544 | 2.559714e-54 | -8.615850e-47 |
| Msa0590620 | Msa0651870 | -0.812021 | 5.227696e-51 | -8.615850e-47 |
| Msa0602320 | Msa0651870 | -0.864121 | 1.526978e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0651870 | MtrunA17_Chr4g0045221 | 100.000 | 101 | 0 | 0 | 1 | 101 | 354 | 454 | 3.02e-68 | 211 |
| Msa0651870 | MtrunA17_Chr3g0133651 | 58.763 | 97 | 38 | 1 | 1 | 95 | 312 | 408 | 9.98e-31 | 112 |
| Msa0651870 | MtrunA17_Chr4g0074711 | 52.632 | 95 | 41 | 2 | 1 | 91 | 294 | 388 | 2.92e-25 | 97.4 |
| Msa0651870 | MtrunA17_Chr1g0153871 | 75.439 | 57 | 14 | 0 | 1 | 57 | 315 | 371 | 7.69e-25 | 96.3 |
| Msa0651870 | MtrunA17_Chr2g0288251 | 61.290 | 62 | 24 | 0 | 1 | 62 | 281 | 342 | 2.03e-21 | 86.7 |
| Msa0651870 | MtrunA17_Chr2g0328791 | 42.268 | 97 | 48 | 2 | 1 | 89 | 254 | 350 | 2.96e-18 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0651870 | AT1G47490.1 | 58.763 | 97 | 38 | 2 | 1 | 96 | 324 | 419 | 1.41e-29 | 109 |
| Msa0651870 | AT1G47500.1 | 58.763 | 97 | 38 | 2 | 1 | 96 | 326 | 421 | 1.43e-29 | 109 |
| Msa0651870 | AT1G49600.1 | 67.391 | 92 | 24 | 4 | 1 | 91 | 347 | 433 | 1.58e-29 | 109 |
| Msa0651870 | AT3G19130.1 | 80.952 | 63 | 11 | 1 | 1 | 63 | 341 | 402 | 4.53e-29 | 108 |
| Msa0651870 | AT1G49600.3 | 71.429 | 63 | 18 | 0 | 1 | 63 | 347 | 409 | 1.95e-23 | 92.8 |
| Msa0651870 | AT1G49600.2 | 71.429 | 63 | 18 | 0 | 1 | 63 | 347 | 409 | 1.95e-23 | 92.8 |
| Msa0651870 | AT1G11650.2 | 50.000 | 88 | 40 | 1 | 1 | 88 | 281 | 364 | 1.88e-21 | 87.4 |
| Msa0651870 | AT5G54900.1 | 51.190 | 84 | 41 | 0 | 1 | 84 | 280 | 363 | 4.32e-20 | 83.2 |
| Msa0651870 | AT4G27000.1 | 59.677 | 62 | 25 | 0 | 1 | 62 | 298 | 359 | 2.46e-19 | 81.3 |
| Msa0651870 | AT5G19350.2 | 38.211 | 123 | 53 | 2 | 1 | 100 | 253 | 375 | 1.08e-17 | 77.0 |
| Msa0651870 | AT5G19350.1 | 38.211 | 123 | 53 | 2 | 1 | 100 | 257 | 379 | 1.09e-17 | 77.0 |
Find 49 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTTAAGTGTCTGAAATTT+TGG | 0.087461 | 4_3:+59416675 | Msa0651870:three_prime_UTR |
| GAATGCTGAGGAAGCAATTC+AGG | 0.256444 | 4_3:+59415873 | Msa0651870:CDS |
| ATATTTGTAGCTGGGTTATA+TGG | 0.261838 | 4_3:+59416629 | Msa0651870:three_prime_UTR |
| GGATATGGTGGCCATGGATA+TGG | 0.328731 | 4_3:+59416454 | Msa0651870:CDS |
| AGCAGACAGTGCGTCTTTCT+TGG | 0.329108 | 4_3:+59415920 | Msa0651870:CDS |
| AAACTCACATGCTTATTTCC+TGG | 0.336224 | 4_3:-59415952 | None:intergenic |
| GCAGACAGTGCGTCTTTCTT+GGG | 0.339350 | 4_3:+59415921 | Msa0651870:CDS |
| TTGAACCTGACCATATAATA+TGG | 0.350372 | 4_3:+59416699 | Msa0651870:three_prime_UTR |
| GGTTATGGAGGTCATGGATA+TGG | 0.355121 | 4_3:+59416439 | Msa0651870:CDS |
| CAACCCGCTGCTGCAGTTCA+AGG | 0.361560 | 4_3:+59416520 | Msa0651870:CDS |
| TGCGAACTTGGTATTGAAAT+AGG | 0.368301 | 4_3:+59416563 | Msa0651870:three_prime_UTR |
| AGGAATGACTCTAATGGTTA+TGG | 0.376637 | 4_3:+59416424 | Msa0651870:CDS |
| ATCCGATTAAACTTGGCATT+TGG | 0.380748 | 4_3:-59416909 | None:intergenic |
| ATAACCTGAGCCATATTATA+TGG | 0.391372 | 4_3:-59416709 | None:intergenic |
| AATACTACAGTTCACTTAAG+AGG | 0.394469 | 4_3:-59416600 | None:intergenic |
| ATATGCTGCTAGACAAAATC+AGG | 0.422308 | 4_3:+59416486 | Msa0651870:CDS |
| GGATTGAATGGAACAGTGAT+TGG | 0.427017 | 4_3:+59415895 | Msa0651870:CDS |
| CTTTCTTGGGGTCGCAGTCC+AGG | 0.447144 | 4_3:+59415934 | Msa0651870:CDS |
| AACGGTCATAGCTGCGAACT+TGG | 0.452353 | 4_3:+59416551 | Msa0651870:exon |
| GTGAAAATCCCAGTCGGTAA+AGG | 0.454342 | 4_3:+59415493 | Msa0651870:CDS |
| GCCCCTTGAACTGCAGCAGC+GGG | 0.471724 | 4_3:-59416523 | None:intergenic |
| AACCCGCTGCTGCAGTTCAA+GGG | 0.482024 | 4_3:+59416521 | Msa0651870:CDS |
| GAAGCAATTCAGGGATTGAA+TGG | 0.482531 | 4_3:+59415883 | Msa0651870:CDS |
| CTGAGCCATATTATATGGTC+AGG | 0.483879 | 4_3:-59416704 | None:intergenic |
| TCTAATGGTTATGGAGGTCA+TGG | 0.506688 | 4_3:+59416433 | Msa0651870:CDS |
| AACTTGGTATTGAAATAGGA+TGG | 0.514847 | 4_3:+59416567 | Msa0651870:three_prime_UTR |
| AAACCACATCCTTTACCGAC+TGG | 0.519643 | 4_3:-59415502 | None:intergenic |
| AGCCCCTTGAACTGCAGCAG+CGG | 0.525089 | 4_3:-59416524 | None:intergenic |
| AGTTCGCAGCTATGACCGTT+AGG | 0.525342 | 4_3:-59416548 | None:intergenic |
| AACCACATCCTTTACCGACT+GGG | 0.528514 | 4_3:-59415501 | None:intergenic |
| AGCTGGGTTATATGGTACCC+AGG | 0.531631 | 4_3:+59416637 | Msa0651870:three_prime_UTR |
| ACCCGCTGCTGCAGTTCAAG+GGG | 0.535252 | 4_3:+59416522 | Msa0651870:CDS |
| ATATATAATCTTAATAACCC+TGG | 0.536162 | 4_3:-59416655 | None:intergenic |
| GGTCATGGATATGGTGGCCA+TGG | 0.539115 | 4_3:+59416448 | Msa0651870:CDS |
| ATCCATTACTTCCATATCCA+TGG | 0.539208 | 4_3:-59416465 | None:intergenic |
| CAGTGGAGGAATGACTCTAA+TGG | 0.541519 | 4_3:+59416418 | Msa0651870:intron |
| ATCCCAGTCGGTAAAGGATG+TGG | 0.548381 | 4_3:+59415499 | Msa0651870:CDS |
| TATATAATCTTAATAACCCT+GGG | 0.551426 | 4_3:-59416654 | None:intergenic |
| GGCCATGGATATGGAAGTAA+TGG | 0.553720 | 4_3:+59416463 | Msa0651870:CDS |
| AATGCTGAGGAAGCAATTCA+GGG | 0.562076 | 4_3:+59415874 | Msa0651870:CDS |
| ATACTACAGTTCACTTAAGA+GGG | 0.568801 | 4_3:-59416599 | None:intergenic |
| CTGACCATATAATATGGCTC+AGG | 0.575979 | 4_3:+59416705 | Msa0651870:three_prime_UTR |
| CAGTTCAAGGGGCTTCCTAA+CGG | 0.591153 | 4_3:+59416533 | Msa0651870:CDS |
| CAGACAGTGCGTCTTTCTTG+GGG | 0.601300 | 4_3:+59415922 | Msa0651870:CDS |
| ATCTCTGTGAAAATCCCAGT+CGG | 0.624783 | 4_3:+59415487 | Msa0651870:CDS |
| AATGACTCTAATGGTTATGG+AGG | 0.625005 | 4_3:+59416427 | Msa0651870:CDS |
| TATGGAGGTCATGGATATGG+TGG | 0.629902 | 4_3:+59416442 | Msa0651870:CDS |
| GCTGGGTTATATGGTACCCA+GGG | 0.634219 | 4_3:+59416638 | Msa0651870:three_prime_UTR |
| ATGTTACAGAAAGAATGCTG+AGG | 0.670854 | 4_3:+59415861 | Msa0651870:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GGAAATTTTATAAAATAATT+TGG | - | chr4_3:59416194-59416213 | None:intergenic | 10.0% |
| !!! | GGAAATTTTATAAAATAATT+TGG | - | chr4_3:59416194-59416213 | None:intergenic | 10.0% |
| !!! | ATTATTTTTATATTTGTAGC+TGG | + | chr4_3:59416620-59416639 | Msa0651870:three_prime_UTR | 15.0% |
| !!! | TTATTTTTATATTTGTAGCT+GGG | + | chr4_3:59416621-59416640 | Msa0651870:three_prime_UTR | 15.0% |
| !! | AATTAAAAAGACAATGTTAA+TGG | + | chr4_3:59416879-59416898 | Msa0651870:three_prime_UTR | 15.0% |
| !!! | ATTATTTTTATATTTGTAGC+TGG | + | chr4_3:59416620-59416639 | Msa0651870:three_prime_UTR | 15.0% |
| !!! | TTATTTTTATATTTGTAGCT+GGG | + | chr4_3:59416621-59416640 | Msa0651870:three_prime_UTR | 15.0% |
| !! | AATTAAAAAGACAATGTTAA+TGG | + | chr4_3:59416879-59416898 | Msa0651870:three_prime_UTR | 15.0% |
| !! | AAAAATAAGACGATACATAT+TGG | - | chr4_3:59415797-59415816 | None:intergenic | 20.0% |
| !!! | TTGTTGTTATATTTTCACTT+TGG | + | chr4_3:59415997-59416016 | Msa0651870:intron | 20.0% |
| !!! | AAAAGTGAGAATTCATTTTA+GGG | - | chr4_3:59416322-59416341 | None:intergenic | 20.0% |
| !!! | TAAAAGTGAGAATTCATTTT+AGG | - | chr4_3:59416323-59416342 | None:intergenic | 20.0% |
| !! | ATGATATAAGATTACTTGAT+TGG | - | chr4_3:59416359-59416378 | None:intergenic | 20.0% |
| !! | ACAAAGAATTAAATTAGAGA+TGG | - | chr4_3:59416391-59416410 | None:intergenic | 20.0% |
| !! | TATATAATCTTAATAACCCT+GGG | - | chr4_3:59416657-59416676 | None:intergenic | 20.0% |
| !! | ATATATAATCTTAATAACCC+TGG | - | chr4_3:59416658-59416677 | None:intergenic | 20.0% |
| !!! | TATTTAAGTGTCTGAAATTT+TGG | + | chr4_3:59416675-59416694 | Msa0651870:three_prime_UTR | 20.0% |
| !! | AAAAATAAGACGATACATAT+TGG | - | chr4_3:59415797-59415816 | None:intergenic | 20.0% |
| !!! | TTGTTGTTATATTTTCACTT+TGG | + | chr4_3:59415997-59416016 | Msa0651870:intron | 20.0% |
| !!! | AAAAGTGAGAATTCATTTTA+GGG | - | chr4_3:59416322-59416341 | None:intergenic | 20.0% |
| !!! | TAAAAGTGAGAATTCATTTT+AGG | - | chr4_3:59416323-59416342 | None:intergenic | 20.0% |
| !! | ATGATATAAGATTACTTGAT+TGG | - | chr4_3:59416359-59416378 | None:intergenic | 20.0% |
| !! | ACAAAGAATTAAATTAGAGA+TGG | - | chr4_3:59416391-59416410 | None:intergenic | 20.0% |
| !! | TATATAATCTTAATAACCCT+GGG | - | chr4_3:59416657-59416676 | None:intergenic | 20.0% |
| !! | ATATATAATCTTAATAACCC+TGG | - | chr4_3:59416658-59416677 | None:intergenic | 20.0% |
| !!! | TATTTAAGTGTCTGAAATTT+TGG | + | chr4_3:59416675-59416694 | Msa0651870:three_prime_UTR | 20.0% |
| ! | GACTTCATAATCAAAATCTA+AGG | - | chr4_3:59416300-59416319 | None:intergenic | 25.0% |
| !!! | TAATTTTAGCTGTCTACTAA+TGG | - | chr4_3:59416753-59416772 | None:intergenic | 25.0% |
| ! | GACTTCATAATCAAAATCTA+AGG | - | chr4_3:59416300-59416319 | None:intergenic | 25.0% |
| !!! | TAATTTTAGCTGTCTACTAA+TGG | - | chr4_3:59416753-59416772 | None:intergenic | 25.0% |
| ACGATCTATATCTATGCTAA+GGG | - | chr4_3:59415561-59415580 | None:intergenic | 30.0% | |
| TACGATCTATATCTATGCTA+AGG | - | chr4_3:59415562-59415581 | None:intergenic | 30.0% | |
| TAAGTATTCCTCAAATGGAT+AGG | + | chr4_3:59415649-59415668 | Msa0651870:intron | 30.0% | |
| AAGTATTCCTCAAATGGATA+GGG | + | chr4_3:59415650-59415669 | Msa0651870:intron | 30.0% | |
| !!! | TGTATCGTCTTATTTTTGAC+TGG | + | chr4_3:59415800-59415819 | Msa0651870:intron | 30.0% |
| !!! | GTATCGTCTTATTTTTGACT+GGG | + | chr4_3:59415801-59415820 | Msa0651870:intron | 30.0% |
| TTAGTACACAAACTTAGAAC+AGG | - | chr4_3:59416069-59416088 | None:intergenic | 30.0% | |
| TTTAGTAGTGTAAGCAATAC+AGG | + | chr4_3:59416108-59416127 | Msa0651870:intron | 30.0% | |
| ! | AACTTGGTATTGAAATAGGA+TGG | + | chr4_3:59416567-59416586 | Msa0651870:three_prime_UTR | 30.0% |
| ATACTACAGTTCACTTAAGA+GGG | - | chr4_3:59416602-59416621 | None:intergenic | 30.0% | |
| AATACTACAGTTCACTTAAG+AGG | - | chr4_3:59416603-59416622 | None:intergenic | 30.0% | |
| ATATTTGTAGCTGGGTTATA+TGG | + | chr4_3:59416629-59416648 | Msa0651870:three_prime_UTR | 30.0% | |
| TTGAACCTGACCATATAATA+TGG | + | chr4_3:59416699-59416718 | Msa0651870:three_prime_UTR | 30.0% | |
| ATAACCTGAGCCATATTATA+TGG | - | chr4_3:59416712-59416731 | None:intergenic | 30.0% | |
| ACGATCTATATCTATGCTAA+GGG | - | chr4_3:59415561-59415580 | None:intergenic | 30.0% | |
| TACGATCTATATCTATGCTA+AGG | - | chr4_3:59415562-59415581 | None:intergenic | 30.0% | |
| TAAGTATTCCTCAAATGGAT+AGG | + | chr4_3:59415649-59415668 | Msa0651870:intron | 30.0% | |
| AAGTATTCCTCAAATGGATA+GGG | + | chr4_3:59415650-59415669 | Msa0651870:intron | 30.0% | |
| !!! | TGTATCGTCTTATTTTTGAC+TGG | + | chr4_3:59415800-59415819 | Msa0651870:intron | 30.0% |
| !!! | GTATCGTCTTATTTTTGACT+GGG | + | chr4_3:59415801-59415820 | Msa0651870:intron | 30.0% |
| TTAGTACACAAACTTAGAAC+AGG | - | chr4_3:59416069-59416088 | None:intergenic | 30.0% | |
| TTTAGTAGTGTAAGCAATAC+AGG | + | chr4_3:59416108-59416127 | Msa0651870:intron | 30.0% | |
| ! | AACTTGGTATTGAAATAGGA+TGG | + | chr4_3:59416567-59416586 | Msa0651870:three_prime_UTR | 30.0% |
| ATACTACAGTTCACTTAAGA+GGG | - | chr4_3:59416602-59416621 | None:intergenic | 30.0% | |
| AATACTACAGTTCACTTAAG+AGG | - | chr4_3:59416603-59416622 | None:intergenic | 30.0% | |
| ATATTTGTAGCTGGGTTATA+TGG | + | chr4_3:59416629-59416648 | Msa0651870:three_prime_UTR | 30.0% | |
| TTGAACCTGACCATATAATA+TGG | + | chr4_3:59416699-59416718 | Msa0651870:three_prime_UTR | 30.0% | |
| ATAACCTGAGCCATATTATA+TGG | - | chr4_3:59416712-59416731 | None:intergenic | 30.0% | |
| TGGCATAAGTATTCCTCAAA+TGG | + | chr4_3:59415644-59415663 | Msa0651870:intron | 35.0% | |
| ATGAAGAGTTGGCATAATCA+AGG | - | chr4_3:59415679-59415698 | None:intergenic | 35.0% | |
| TCTGTAACATAAAGAGCAGA+AGG | - | chr4_3:59415851-59415870 | None:intergenic | 35.0% | |
| ATGTTACAGAAAGAATGCTG+AGG | + | chr4_3:59415861-59415880 | Msa0651870:intron | 35.0% | |
| AAACTCACATGCTTATTTCC+TGG | - | chr4_3:59415955-59415974 | None:intergenic | 35.0% | |
| ! | TTTTCACTTTGGCCATCTAA+TGG | + | chr4_3:59416008-59416027 | Msa0651870:intron | 35.0% |
| TTTCACTTTGGCCATCTAAT+GGG | + | chr4_3:59416009-59416028 | Msa0651870:intron | 35.0% | |
| ! | CTCGTAATTTTCCCATTAGA+TGG | - | chr4_3:59416023-59416042 | None:intergenic | 35.0% |
| ! | ATGCTGAAGGTATATGAATG+CGG | - | chr4_3:59416215-59416234 | None:intergenic | 35.0% |
| AGGAATGACTCTAATGGTTA+TGG | + | chr4_3:59416424-59416443 | Msa0651870:CDS | 35.0% | |
| AATGACTCTAATGGTTATGG+AGG | + | chr4_3:59416427-59416446 | Msa0651870:CDS | 35.0% | |
| ATCCATTACTTCCATATCCA+TGG | - | chr4_3:59416468-59416487 | None:intergenic | 35.0% | |
| ATATGCTGCTAGACAAAATC+AGG | + | chr4_3:59416486-59416505 | Msa0651870:CDS | 35.0% | |
| ! | TGCGAACTTGGTATTGAAAT+AGG | + | chr4_3:59416563-59416582 | Msa0651870:three_prime_UTR | 35.0% |
| TGGCATAAGTATTCCTCAAA+TGG | + | chr4_3:59415644-59415663 | Msa0651870:intron | 35.0% | |
| ATGAAGAGTTGGCATAATCA+AGG | - | chr4_3:59415679-59415698 | None:intergenic | 35.0% | |
| TCTGTAACATAAAGAGCAGA+AGG | - | chr4_3:59415851-59415870 | None:intergenic | 35.0% | |
| ATGTTACAGAAAGAATGCTG+AGG | + | chr4_3:59415861-59415880 | Msa0651870:intron | 35.0% | |
| AAACTCACATGCTTATTTCC+TGG | - | chr4_3:59415955-59415974 | None:intergenic | 35.0% | |
| ! | TTTTCACTTTGGCCATCTAA+TGG | + | chr4_3:59416008-59416027 | Msa0651870:intron | 35.0% |
| TTTCACTTTGGCCATCTAAT+GGG | + | chr4_3:59416009-59416028 | Msa0651870:intron | 35.0% | |
| ! | CTCGTAATTTTCCCATTAGA+TGG | - | chr4_3:59416023-59416042 | None:intergenic | 35.0% |
| ! | ATGCTGAAGGTATATGAATG+CGG | - | chr4_3:59416215-59416234 | None:intergenic | 35.0% |
| AGGAATGACTCTAATGGTTA+TGG | + | chr4_3:59416424-59416443 | Msa0651870:CDS | 35.0% | |
| AATGACTCTAATGGTTATGG+AGG | + | chr4_3:59416427-59416446 | Msa0651870:CDS | 35.0% | |
| ATCCATTACTTCCATATCCA+TGG | - | chr4_3:59416468-59416487 | None:intergenic | 35.0% | |
| ATATGCTGCTAGACAAAATC+AGG | + | chr4_3:59416486-59416505 | Msa0651870:CDS | 35.0% | |
| ! | TGCGAACTTGGTATTGAAAT+AGG | + | chr4_3:59416563-59416582 | Msa0651870:three_prime_UTR | 35.0% |
| ATCTCTGTGAAAATCCCAGT+CGG | + | chr4_3:59415487-59415506 | Msa0651870:CDS | 40.0% | |
| !!! | GTTTTGTTCAACTTGCTGAC+AGG | + | chr4_3:59415521-59415540 | Msa0651870:CDS | 40.0% |
| GTTTCTTGCGAAATGAACAG+TGG | + | chr4_3:59415624-59415643 | Msa0651870:intron | 40.0% | |
| AAGGATTCCCTATCCATTTG+AGG | - | chr4_3:59415660-59415679 | None:intergenic | 40.0% | |
| TCATCCTGTGGAATCATGTA+AGG | + | chr4_3:59415695-59415714 | Msa0651870:intron | 40.0% | |
| TCATCCTTACATGATTCCAC+AGG | - | chr4_3:59415702-59415721 | None:intergenic | 40.0% | |
| TGTGGAATCATGTAAGGATG+AGG | + | chr4_3:59415701-59415720 | Msa0651870:intron | 40.0% | |
| !!! | TCGTCTTATTTTTGACTGGG+TGG | + | chr4_3:59415804-59415823 | Msa0651870:intron | 40.0% |
| AATGCTGAGGAAGCAATTCA+GGG | + | chr4_3:59415874-59415893 | Msa0651870:CDS | 40.0% | |
| GAAGCAATTCAGGGATTGAA+TGG | + | chr4_3:59415883-59415902 | Msa0651870:CDS | 40.0% | |
| GGATTGAATGGAACAGTGAT+TGG | + | chr4_3:59415895-59415914 | Msa0651870:CDS | 40.0% | |
| AGCAACTAGTTACATGCTGA+AGG | - | chr4_3:59416228-59416247 | None:intergenic | 40.0% | |
| AATTCTTTGTGATGTCGCAG+TGG | + | chr4_3:59416401-59416420 | Msa0651870:intron | 40.0% | |
| TCTAATGGTTATGGAGGTCA+TGG | + | chr4_3:59416433-59416452 | Msa0651870:CDS | 40.0% | |
| CTGAGCCATATTATATGGTC+AGG | - | chr4_3:59416707-59416726 | None:intergenic | 40.0% | |
| CTGACCATATAATATGGCTC+AGG | + | chr4_3:59416705-59416724 | Msa0651870:three_prime_UTR | 40.0% | |
| ATCTCTGTGAAAATCCCAGT+CGG | + | chr4_3:59415487-59415506 | Msa0651870:CDS | 40.0% | |
| !!! | GTTTTGTTCAACTTGCTGAC+AGG | + | chr4_3:59415521-59415540 | Msa0651870:CDS | 40.0% |
| GTTTCTTGCGAAATGAACAG+TGG | + | chr4_3:59415624-59415643 | Msa0651870:intron | 40.0% | |
| AAGGATTCCCTATCCATTTG+AGG | - | chr4_3:59415660-59415679 | None:intergenic | 40.0% | |
| TCATCCTGTGGAATCATGTA+AGG | + | chr4_3:59415695-59415714 | Msa0651870:intron | 40.0% | |
| TCATCCTTACATGATTCCAC+AGG | - | chr4_3:59415702-59415721 | None:intergenic | 40.0% | |
| TGTGGAATCATGTAAGGATG+AGG | + | chr4_3:59415701-59415720 | Msa0651870:intron | 40.0% | |
| !!! | TCGTCTTATTTTTGACTGGG+TGG | + | chr4_3:59415804-59415823 | Msa0651870:intron | 40.0% |
| AATGCTGAGGAAGCAATTCA+GGG | + | chr4_3:59415874-59415893 | Msa0651870:CDS | 40.0% | |
| GAAGCAATTCAGGGATTGAA+TGG | + | chr4_3:59415883-59415902 | Msa0651870:CDS | 40.0% | |
| GGATTGAATGGAACAGTGAT+TGG | + | chr4_3:59415895-59415914 | Msa0651870:CDS | 40.0% | |
| AGCAACTAGTTACATGCTGA+AGG | - | chr4_3:59416228-59416247 | None:intergenic | 40.0% | |
| AATTCTTTGTGATGTCGCAG+TGG | + | chr4_3:59416401-59416420 | Msa0651870:intron | 40.0% | |
| TCTAATGGTTATGGAGGTCA+TGG | + | chr4_3:59416433-59416452 | Msa0651870:CDS | 40.0% | |
| CTGAGCCATATTATATGGTC+AGG | - | chr4_3:59416707-59416726 | None:intergenic | 40.0% | |
| CTGACCATATAATATGGCTC+AGG | + | chr4_3:59416705-59416724 | Msa0651870:three_prime_UTR | 40.0% | |
| GTGAAAATCCCAGTCGGTAA+AGG | + | chr4_3:59415493-59415512 | Msa0651870:CDS | 45.0% | |
| ! | AACCACATCCTTTACCGACT+GGG | - | chr4_3:59415504-59415523 | None:intergenic | 45.0% |
| AAACCACATCCTTTACCGAC+TGG | - | chr4_3:59415505-59415524 | None:intergenic | 45.0% | |
| TATGCCAACTCTTCATCCTG+TGG | + | chr4_3:59415683-59415702 | Msa0651870:intron | 45.0% | |
| GATTCCACAGGATGAAGAGT+TGG | - | chr4_3:59415690-59415709 | None:intergenic | 45.0% | |
| GAATGCTGAGGAAGCAATTC+AGG | + | chr4_3:59415873-59415892 | Msa0651870:CDS | 45.0% | |
| GTCTCGTTCTCTCTGTAATC+AGG | + | chr4_3:59416042-59416061 | Msa0651870:intron | 45.0% | |
| CAGTGGAGGAATGACTCTAA+TGG | + | chr4_3:59416418-59416437 | Msa0651870:intron | 45.0% | |
| GGTTATGGAGGTCATGGATA+TGG | + | chr4_3:59416439-59416458 | Msa0651870:CDS | 45.0% | |
| TATGGAGGTCATGGATATGG+TGG | + | chr4_3:59416442-59416461 | Msa0651870:CDS | 45.0% | |
| GGCCATGGATATGGAAGTAA+TGG | + | chr4_3:59416463-59416482 | Msa0651870:CDS | 45.0% | |
| GTGAAAATCCCAGTCGGTAA+AGG | + | chr4_3:59415493-59415512 | Msa0651870:CDS | 45.0% | |
| ! | AACCACATCCTTTACCGACT+GGG | - | chr4_3:59415504-59415523 | None:intergenic | 45.0% |
| AAACCACATCCTTTACCGAC+TGG | - | chr4_3:59415505-59415524 | None:intergenic | 45.0% | |
| TATGCCAACTCTTCATCCTG+TGG | + | chr4_3:59415683-59415702 | Msa0651870:intron | 45.0% | |
| GATTCCACAGGATGAAGAGT+TGG | - | chr4_3:59415690-59415709 | None:intergenic | 45.0% | |
| GAATGCTGAGGAAGCAATTC+AGG | + | chr4_3:59415873-59415892 | Msa0651870:CDS | 45.0% | |
| GTCTCGTTCTCTCTGTAATC+AGG | + | chr4_3:59416042-59416061 | Msa0651870:intron | 45.0% | |
| CAGTGGAGGAATGACTCTAA+TGG | + | chr4_3:59416418-59416437 | Msa0651870:intron | 45.0% | |
| GGTTATGGAGGTCATGGATA+TGG | + | chr4_3:59416439-59416458 | Msa0651870:CDS | 45.0% | |
| TATGGAGGTCATGGATATGG+TGG | + | chr4_3:59416442-59416461 | Msa0651870:CDS | 45.0% | |
| GGCCATGGATATGGAAGTAA+TGG | + | chr4_3:59416463-59416482 | Msa0651870:CDS | 45.0% | |
| ATCCCAGTCGGTAAAGGATG+TGG | + | chr4_3:59415499-59415518 | Msa0651870:CDS | 50.0% | |
| CTTGCTGACAGGTACACTTG+TGG | + | chr4_3:59415532-59415551 | Msa0651870:intron | 50.0% | |
| AGCAGACAGTGCGTCTTTCT+TGG | + | chr4_3:59415920-59415939 | Msa0651870:CDS | 50.0% | |
| GCAGACAGTGCGTCTTTCTT+GGG | + | chr4_3:59415921-59415940 | Msa0651870:CDS | 50.0% | |
| CAGACAGTGCGTCTTTCTTG+GGG | + | chr4_3:59415922-59415941 | Msa0651870:CDS | 50.0% | |
| TCTTTGTGATGTCGCAGTGG+AGG | + | chr4_3:59416404-59416423 | Msa0651870:intron | 50.0% | |
| GGATATGGTGGCCATGGATA+TGG | + | chr4_3:59416454-59416473 | Msa0651870:CDS | 50.0% | |
| CAGTTCAAGGGGCTTCCTAA+CGG | + | chr4_3:59416533-59416552 | Msa0651870:CDS | 50.0% | |
| AGTTCGCAGCTATGACCGTT+AGG | - | chr4_3:59416551-59416570 | None:intergenic | 50.0% | |
| AACGGTCATAGCTGCGAACT+TGG | + | chr4_3:59416551-59416570 | Msa0651870:exon | 50.0% | |
| AGCTGGGTTATATGGTACCC+AGG | + | chr4_3:59416637-59416656 | Msa0651870:three_prime_UTR | 50.0% | |
| GCTGGGTTATATGGTACCCA+GGG | + | chr4_3:59416638-59416657 | Msa0651870:three_prime_UTR | 50.0% | |
| ATCCCAGTCGGTAAAGGATG+TGG | + | chr4_3:59415499-59415518 | Msa0651870:CDS | 50.0% | |
| CTTGCTGACAGGTACACTTG+TGG | + | chr4_3:59415532-59415551 | Msa0651870:intron | 50.0% | |
| AGCAGACAGTGCGTCTTTCT+TGG | + | chr4_3:59415920-59415939 | Msa0651870:CDS | 50.0% | |
| GCAGACAGTGCGTCTTTCTT+GGG | + | chr4_3:59415921-59415940 | Msa0651870:CDS | 50.0% | |
| CAGACAGTGCGTCTTTCTTG+GGG | + | chr4_3:59415922-59415941 | Msa0651870:CDS | 50.0% | |
| TCTTTGTGATGTCGCAGTGG+AGG | + | chr4_3:59416404-59416423 | Msa0651870:intron | 50.0% | |
| GGATATGGTGGCCATGGATA+TGG | + | chr4_3:59416454-59416473 | Msa0651870:CDS | 50.0% | |
| CAGTTCAAGGGGCTTCCTAA+CGG | + | chr4_3:59416533-59416552 | Msa0651870:CDS | 50.0% | |
| AGTTCGCAGCTATGACCGTT+AGG | - | chr4_3:59416551-59416570 | None:intergenic | 50.0% | |
| AACGGTCATAGCTGCGAACT+TGG | + | chr4_3:59416551-59416570 | Msa0651870:exon | 50.0% | |
| AGCTGGGTTATATGGTACCC+AGG | + | chr4_3:59416637-59416656 | Msa0651870:three_prime_UTR | 50.0% | |
| GCTGGGTTATATGGTACCCA+GGG | + | chr4_3:59416638-59416657 | Msa0651870:three_prime_UTR | 50.0% | |
| GGTCATGGATATGGTGGCCA+TGG | + | chr4_3:59416448-59416467 | Msa0651870:CDS | 55.0% | |
| AACCCGCTGCTGCAGTTCAA+GGG | + | chr4_3:59416521-59416540 | Msa0651870:CDS | 55.0% | |
| GGTCATGGATATGGTGGCCA+TGG | + | chr4_3:59416448-59416467 | Msa0651870:CDS | 55.0% | |
| AACCCGCTGCTGCAGTTCAA+GGG | + | chr4_3:59416521-59416540 | Msa0651870:CDS | 55.0% | |
| TTGCAACCCCCACAGCACAG+TGG | + | chr4_3:59415598-59415617 | Msa0651870:intron | 60.0% | |
| TGCAACCCCCACAGCACAGT+GGG | + | chr4_3:59415599-59415618 | Msa0651870:intron | 60.0% | |
| AAACCGCCCACTGTGCTGTG+GGG | - | chr4_3:59415608-59415627 | None:intergenic | 60.0% | |
| GAAACCGCCCACTGTGCTGT+GGG | - | chr4_3:59415609-59415628 | None:intergenic | 60.0% | |
| AGAAACCGCCCACTGTGCTG+TGG | - | chr4_3:59415610-59415629 | None:intergenic | 60.0% | |
| CTTTCTTGGGGTCGCAGTCC+AGG | + | chr4_3:59415934-59415953 | Msa0651870:CDS | 60.0% | |
| CAACCCGCTGCTGCAGTTCA+AGG | + | chr4_3:59416520-59416539 | Msa0651870:CDS | 60.0% | |
| ACCCGCTGCTGCAGTTCAAG+GGG | + | chr4_3:59416522-59416541 | Msa0651870:CDS | 60.0% | |
| AGCCCCTTGAACTGCAGCAG+CGG | - | chr4_3:59416527-59416546 | None:intergenic | 60.0% | |
| TTGCAACCCCCACAGCACAG+TGG | + | chr4_3:59415598-59415617 | Msa0651870:intron | 60.0% | |
| TGCAACCCCCACAGCACAGT+GGG | + | chr4_3:59415599-59415618 | Msa0651870:intron | 60.0% | |
| AAACCGCCCACTGTGCTGTG+GGG | - | chr4_3:59415608-59415627 | None:intergenic | 60.0% | |
| GAAACCGCCCACTGTGCTGT+GGG | - | chr4_3:59415609-59415628 | None:intergenic | 60.0% | |
| AGAAACCGCCCACTGTGCTG+TGG | - | chr4_3:59415610-59415629 | None:intergenic | 60.0% | |
| CTTTCTTGGGGTCGCAGTCC+AGG | + | chr4_3:59415934-59415953 | Msa0651870:CDS | 60.0% | |
| CAACCCGCTGCTGCAGTTCA+AGG | + | chr4_3:59416520-59416539 | Msa0651870:CDS | 60.0% | |
| ACCCGCTGCTGCAGTTCAAG+GGG | + | chr4_3:59416522-59416541 | Msa0651870:CDS | 60.0% | |
| AGCCCCTTGAACTGCAGCAG+CGG | - | chr4_3:59416527-59416546 | None:intergenic | 60.0% | |
| AACCCCCACAGCACAGTGGG+CGG | + | chr4_3:59415602-59415621 | Msa0651870:intron | 65.0% | |
| AACCGCCCACTGTGCTGTGG+GGG | - | chr4_3:59415607-59415626 | None:intergenic | 65.0% | |
| GCCCCTTGAACTGCAGCAGC+GGG | - | chr4_3:59416526-59416545 | None:intergenic | 65.0% | |
| AACCCCCACAGCACAGTGGG+CGG | + | chr4_3:59415602-59415621 | Msa0651870:intron | 65.0% | |
| AACCGCCCACTGTGCTGTGG+GGG | - | chr4_3:59415607-59415626 | None:intergenic | 65.0% | |
| GCCCCTTGAACTGCAGCAGC+GGG | - | chr4_3:59416526-59416545 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 59415466 | 59416920 | 59415466 | ID=Msa0651870;Name=Msa0651870 |
| chr4_3 | mRNA | 59415466 | 59416920 | 59415466 | ID=Msa0651870-mRNA-1;Parent=Msa0651870;Name=Msa0651870-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|1|1|0.5|0.66|3|368|101 |
| chr4_3 | exon | 59415466 | 59415542 | 59415466 | ID=Msa0651870-mRNA-1:exon:15912;Parent=Msa0651870-mRNA-1 |
| chr4_3 | exon | 59415870 | 59415966 | 59415870 | ID=Msa0651870-mRNA-1:exon:15913;Parent=Msa0651870-mRNA-1 |
| chr4_3 | exon | 59416421 | 59416920 | 59416421 | ID=Msa0651870-mRNA-1:exon:15914;Parent=Msa0651870-mRNA-1 |
| chr4_3 | CDS | 59415466 | 59415542 | 59415466 | ID=Msa0651870-mRNA-1:cds;Parent=Msa0651870-mRNA-1 |
| chr4_3 | CDS | 59415870 | 59415966 | 59415870 | ID=Msa0651870-mRNA-1:cds;Parent=Msa0651870-mRNA-1 |
| chr4_3 | CDS | 59416421 | 59416552 | 59416421 | ID=Msa0651870-mRNA-1:cds;Parent=Msa0651870-mRNA-1 |
| chr4_3 | three_prime_UTR | 59416553 | 59416920 | 59416553 | ID=Msa0651870-mRNA-1:three_prime_utr;Parent=Msa0651870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
