Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0651890 | XP_003608019.2 | 100.000 | 101 | 0 | 0 | 1 | 101 | 354 | 454 | 3.28e-64 | 211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0651890 | sp|Q9LEB3|RBP47_NICPL | 60.784 | 102 | 39 | 1 | 1 | 101 | 315 | 416 | 5.82e-32 | 118 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007810 | Msa0651890 | -0.814604 | 1.415574e-51 | -8.615850e-47 |
| Msa0011920 | Msa0651890 | -0.822204 | 2.684819e-53 | -8.615850e-47 |
| Msa0024500 | Msa0651890 | -0.814614 | 1.408323e-51 | -8.615850e-47 |
| Msa0026780 | Msa0651890 | 0.864033 | 1.626662e-64 | -8.615850e-47 |
| Msa0034100 | Msa0651890 | -0.826611 | 2.467581e-54 | -8.615850e-47 |
| Msa0037180 | Msa0651890 | 0.800744 | 1.248446e-48 | -8.615850e-47 |
| Msa0037650 | Msa0651890 | -0.824471 | 7.929609e-54 | -8.615850e-47 |
| Msa0044010 | Msa0651890 | 0.846701 | 1.840491e-59 | -8.615850e-47 |
| Msa0053640 | Msa0651890 | 0.813787 | 2.144251e-51 | -8.615850e-47 |
| Msa0056230 | Msa0651890 | -0.802532 | 5.364649e-49 | -8.615850e-47 |
| Msa0059080 | Msa0651890 | 0.854911 | 8.980766e-62 | -8.615850e-47 |
| Msa0075990 | Msa0651890 | -0.803332 | 3.666753e-49 | -8.615850e-47 |
| Msa0077320 | Msa0651890 | 0.844204 | 8.738141e-59 | -8.615850e-47 |
| Msa0077980 | Msa0651890 | 0.828339 | 9.500858e-55 | -8.615850e-47 |
| Msa0079320 | Msa0651890 | -0.807297 | 5.415356e-50 | -8.615850e-47 |
| Msa0091300 | Msa0651890 | -0.842431 | 2.597539e-58 | -8.615850e-47 |
| Msa0091730 | Msa0651890 | 0.819711 | 1.006057e-52 | -8.615850e-47 |
| Msa0092220 | Msa0651890 | 0.810531 | 1.100519e-50 | -8.615850e-47 |
| Msa0092480 | Msa0651890 | -0.810090 | 1.369925e-50 | -8.615850e-47 |
| Msa0097470 | Msa0651890 | -0.816401 | 5.635273e-52 | -8.615850e-47 |
| Msa0110240 | Msa0651890 | 0.810568 | 1.080452e-50 | -8.615850e-47 |
| Msa0603090 | Msa0651890 | 0.839388 | 1.632866e-57 | -8.615850e-47 |
| Msa0610240 | Msa0651890 | -0.808668 | 2.765492e-50 | -8.615850e-47 |
| Msa0616890 | Msa0651890 | -0.801696 | 7.971483e-49 | -8.615850e-47 |
| Msa0621670 | Msa0651890 | -0.841526 | 4.503920e-58 | -8.615850e-47 |
| Msa0626920 | Msa0651890 | 0.870225 | 1.714282e-66 | -8.615850e-47 |
| Msa0651870 | Msa0651890 | 0.999334 | 6.541105e-304 | -8.615850e-47 |
| Msa0651890 | Msa0660150 | 0.825673 | 4.124483e-54 | -8.615850e-47 |
| Msa0651890 | Msa0671300 | -0.804899 | 1.731062e-49 | -8.615850e-47 |
| Msa0651890 | Msa0676090 | -0.813105 | 3.028316e-51 | -8.615850e-47 |
| Msa0651890 | Msa0676310 | -0.811302 | 7.493944e-51 | -8.615850e-47 |
| Msa0651890 | Msa0683200 | -0.854417 | 1.248328e-61 | -8.615850e-47 |
| Msa0651890 | Msa0700410 | 0.867586 | 1.227268e-65 | -8.615850e-47 |
| Msa0651890 | Msa0701800 | -0.824050 | 9.956524e-54 | -8.615850e-47 |
| Msa0651890 | Msa0703430 | -0.809629 | 1.721383e-50 | -8.615850e-47 |
| Msa0651890 | Msa0707860 | -0.811898 | 5.561615e-51 | -8.615850e-47 |
| Msa0651890 | Msa0720710 | 0.802116 | 6.536567e-49 | -8.615850e-47 |
| Msa0651890 | Msa0733240 | -0.802013 | 6.860564e-49 | -8.615850e-47 |
| Msa0651890 | Msa0742370 | -0.858441 | 8.222176e-63 | -8.615850e-47 |
| Msa0651890 | Msa0748480 | 0.837045 | 6.551459e-57 | -8.615850e-47 |
| Msa0651890 | Msa0752490 | -0.810393 | 1.178997e-50 | -8.615850e-47 |
| Msa0651890 | Msa0753270 | 0.805028 | 1.626781e-49 | -8.615850e-47 |
| Msa0651890 | Msa0756670 | -0.808194 | 3.492011e-50 | -8.615850e-47 |
| Msa0651890 | Msa0769910 | -0.805618 | 1.223768e-49 | -8.615850e-47 |
| Msa0651890 | Msa0779450 | -0.865374 | 6.185081e-65 | -8.615850e-47 |
| Msa0651890 | Msa0797980 | -0.802678 | 5.005054e-49 | -8.615850e-47 |
| Msa0651890 | Msa0801320 | -0.819972 | 8.769596e-53 | -8.615850e-47 |
| Msa0651890 | Msa0805390 | 0.825448 | 4.661784e-54 | -8.615850e-47 |
| Msa0651890 | Msa0807100 | -0.801028 | 1.092469e-48 | -8.615850e-47 |
| Msa0651890 | Msa0807870 | -0.826044 | 3.366867e-54 | -8.615850e-47 |
| Msa0651890 | Msa0812020 | -0.821321 | 4.296896e-53 | -8.615850e-47 |
| Msa0651890 | Msa0823480 | -0.802618 | 5.150869e-49 | -8.615850e-47 |
| Msa0651890 | Msa0829580 | 0.803105 | 4.086240e-49 | -8.615850e-47 |
| Msa0651890 | Msa0832520 | 0.819067 | 1.410856e-52 | -8.615850e-47 |
| Msa0651890 | Msa0844870 | -0.821192 | 4.600225e-53 | -8.615850e-47 |
| Msa0651890 | Msa0844970 | -0.834075 | 3.695405e-56 | -8.615850e-47 |
| Msa0651890 | Msa0862480 | -0.840992 | 6.223586e-58 | -8.615850e-47 |
| Msa0651890 | Msa0925630 | -0.819014 | 1.450907e-52 | -8.615850e-47 |
| Msa0651890 | Msa0931550 | -0.851249 | 1.003433e-60 | -8.615850e-47 |
| Msa0651890 | Msa0967900 | -0.806312 | 8.743978e-50 | -8.615850e-47 |
| Msa0651890 | Msa0969380 | 0.846235 | 2.466675e-59 | -8.615850e-47 |
| Msa0651890 | Msa0969590 | 0.883670 | 3.686706e-71 | -8.615850e-47 |
| Msa0651890 | Msa0969720 | 0.843553 | 1.305566e-58 | -8.615850e-47 |
| Msa0651890 | Msa1002970 | -0.822602 | 2.170084e-53 | -8.615850e-47 |
| Msa0651890 | Msa1004410 | -0.802064 | 6.698892e-49 | -8.615850e-47 |
| Msa0651890 | Msa1014550 | -0.803894 | 2.802984e-49 | -8.615850e-47 |
| Msa0651890 | Msa1026970 | 0.812342 | 4.448842e-51 | -8.615850e-47 |
| Msa0651890 | Msa1029570 | -0.812714 | 3.689987e-51 | -8.615850e-47 |
| Msa0651890 | Msa1039440 | -0.838982 | 2.080174e-57 | -8.615850e-47 |
| Msa0651890 | Msa1055520 | -0.819431 | 1.165498e-52 | -8.615850e-47 |
| Msa0651890 | Msa1078590 | -0.805790 | 1.125819e-49 | -8.615850e-47 |
| Msa0651890 | Msa1078760 | -0.810943 | 8.964433e-51 | -8.615850e-47 |
| Msa0651890 | Msa1087890 | 0.817461 | 3.259149e-52 | -8.615850e-47 |
| Msa0651890 | Msa1088400 | -0.818833 | 1.594315e-52 | -8.615850e-47 |
| Msa0651890 | Msa1093190 | -0.802671 | 5.023649e-49 | -8.615850e-47 |
| Msa0651890 | Msa1094810 | 0.822707 | 2.050943e-53 | -8.615850e-47 |
| Msa0651890 | Msa1112210 | -0.800361 | 1.494226e-48 | -8.615850e-47 |
| Msa0651890 | Msa1121720 | -0.801580 | 8.419869e-49 | -8.615850e-47 |
| Msa0651890 | Msa1133760 | 0.817519 | 3.162657e-52 | -8.615850e-47 |
| Msa0651890 | Msa1146980 | 0.808773 | 2.626827e-50 | -8.615850e-47 |
| Msa0651890 | Msa1147650 | 0.807802 | 4.230887e-50 | -8.615850e-47 |
| Msa0651890 | Msa1169590 | -0.804017 | 2.643009e-49 | -8.615850e-47 |
| Msa0651890 | Msa1197720 | 0.842526 | 2.450583e-58 | -8.615850e-47 |
| Msa0651890 | Msa1202470 | 0.833492 | 5.169407e-56 | -8.615850e-47 |
| Msa0651890 | Msa1202710 | -0.819458 | 1.149201e-52 | -8.615850e-47 |
| Msa0651890 | Msa1205270 | -0.825561 | 4.382306e-54 | -8.615850e-47 |
| Msa0651890 | Msa1207920 | -0.817997 | 2.466341e-52 | -8.615850e-47 |
| Msa0651890 | Msa1213180 | -0.828726 | 7.657249e-55 | -8.615850e-47 |
| Msa0651890 | Msa1213470 | -0.801083 | 1.064551e-48 | -8.615850e-47 |
| Msa0651890 | Msa1251410 | 0.873407 | 1.506167e-67 | -8.615850e-47 |
| Msa0651890 | Msa1254910 | 0.825405 | 4.771888e-54 | -8.615850e-47 |
| Msa0651890 | Msa1260520 | -0.825311 | 5.023933e-54 | -8.615850e-47 |
| Msa0651890 | Msa1267390 | -0.813629 | 2.323192e-51 | -8.615850e-47 |
| Msa0651890 | Msa1300370 | -0.802512 | 5.416210e-49 | -8.615850e-47 |
| Msa0651890 | Msa1323260 | -0.804906 | 1.724778e-49 | -8.615850e-47 |
| Msa0651890 | Msa1326780 | -0.826471 | 2.664438e-54 | -8.615850e-47 |
| Msa0651890 | Msa1331570 | -0.813364 | 2.657778e-51 | -8.615850e-47 |
| Msa0651890 | Msa1352600 | -0.837051 | 6.527229e-57 | -8.615850e-47 |
| Msa0651890 | Msa1356100 | -0.800715 | 1.265553e-48 | -8.615850e-47 |
| Msa0651890 | Msa1357990 | 0.822715 | 2.042805e-53 | -8.615850e-47 |
| Msa0651890 | Msa1358470 | 0.827034 | 1.954823e-54 | -8.615850e-47 |
| Msa0651890 | Msa1360070 | -0.837922 | 3.905537e-57 | -8.615850e-47 |
| Msa0651890 | Msa1361670 | -0.801007 | 1.103097e-48 | -8.615850e-47 |
| Msa0651890 | Msa1363270 | -0.815614 | 8.446047e-52 | -8.615850e-47 |
| Msa0651890 | Msa1363280 | -0.882612 | 8.999629e-71 | -8.615850e-47 |
| Msa0651890 | Msa1372190 | -0.801230 | 9.931731e-49 | -8.615850e-47 |
| Msa0651890 | Msa1376660 | 0.811129 | 8.168376e-51 | -8.615850e-47 |
| Msa0651890 | Msa1377980 | -0.809025 | 2.320285e-50 | -8.615850e-47 |
| Msa0651890 | Msa1384410 | -0.802950 | 4.397771e-49 | -8.615850e-47 |
| Msa0651890 | Msa1385970 | 0.806644 | 7.440990e-50 | -8.615850e-47 |
| Msa0651890 | Msa1386580 | -0.800884 | 1.169041e-48 | -8.615850e-47 |
| Msa0651890 | Msa1396200 | -0.811541 | 6.648794e-51 | -8.615850e-47 |
| Msa0651890 | Msa1398450 | -0.823772 | 1.157108e-53 | -8.615850e-47 |
| Msa0651890 | Msa1400290 | -0.824948 | 6.120075e-54 | -8.615850e-47 |
| Msa0651890 | Msa1401640 | -0.800011 | 1.760516e-48 | -8.615850e-47 |
| Msa0651890 | Msa1403660 | 0.813275 | 2.780080e-51 | -8.615850e-47 |
| Msa0651890 | Msa1403940 | 0.834150 | 3.540338e-56 | -8.615850e-47 |
| Msa0651890 | Msa1408280 | -0.809127 | 2.206444e-50 | -8.615850e-47 |
| Msa0651890 | Msa1408860 | -0.801423 | 9.069089e-49 | -8.615850e-47 |
| Msa0651890 | Msa1414780 | -0.828616 | 8.144518e-55 | -8.615850e-47 |
| Msa0651890 | Msa1417110 | 0.813212 | 2.868860e-51 | -8.615850e-47 |
| Msa0651890 | Msa1429810 | 0.816972 | 4.197867e-52 | -8.615850e-47 |
| Msa0651890 | Msa1453430 | 0.846883 | 1.641872e-59 | -8.615850e-47 |
| Msa0651890 | Msa1457390 | -0.810054 | 1.394971e-50 | -8.615850e-47 |
| Msa0651890 | Msa1459130 | -0.823284 | 1.504482e-53 | -8.615850e-47 |
| Msa0651890 | Msa1462210 | -0.823764 | 1.161834e-53 | -8.615850e-47 |
| Msa0122530 | Msa0651890 | 0.828641 | 8.031152e-55 | -8.615850e-47 |
| Msa0128110 | Msa0651890 | -0.820815 | 5.620460e-53 | -8.615850e-47 |
| Msa0145430 | Msa0651890 | 0.810743 | 9.904513e-51 | -8.615850e-47 |
| Msa0148040 | Msa0651890 | 0.809182 | 2.147573e-50 | -8.615850e-47 |
| Msa0150330 | Msa0651890 | 0.860529 | 1.938525e-63 | -8.615850e-47 |
| Msa0169710 | Msa0651890 | 0.802463 | 5.543952e-49 | -8.615850e-47 |
| Msa0173600 | Msa0651890 | -0.818438 | 1.960193e-52 | -8.615850e-47 |
| Msa0186400 | Msa0651890 | -0.832468 | 9.292847e-56 | -8.615850e-47 |
| Msa0199620 | Msa0651890 | 0.811518 | 6.724644e-51 | -8.615850e-47 |
| Msa0206040 | Msa0651890 | -0.815728 | 7.968912e-52 | -8.615850e-47 |
| Msa0219280 | Msa0651890 | 0.819874 | 9.235510e-53 | -8.615850e-47 |
| Msa0220170 | Msa0651890 | 0.814491 | 1.499332e-51 | -8.615850e-47 |
| Msa0225070 | Msa0651890 | -0.806809 | 6.867203e-50 | -8.615850e-47 |
| Msa0233920 | Msa0651890 | 0.822624 | 2.143898e-53 | -8.615850e-47 |
| Msa0236690 | Msa0651890 | -0.800651 | 1.304318e-48 | -8.615850e-47 |
| Msa0238140 | Msa0651890 | 0.809705 | 1.658469e-50 | -8.615850e-47 |
| Msa0384590 | Msa0651890 | 0.852482 | 4.484028e-61 | -8.615850e-47 |
| Msa0387030 | Msa0651890 | 0.823548 | 1.305743e-53 | -8.615850e-47 |
| Msa0397130 | Msa0651890 | 0.809089 | 2.247949e-50 | -8.615850e-47 |
| Msa0434370 | Msa0651890 | 0.815443 | 9.221100e-52 | -8.615850e-47 |
| Msa0434660 | Msa0651890 | 0.840017 | 1.120161e-57 | -8.615850e-47 |
| Msa0460080 | Msa0651890 | -0.808077 | 3.696486e-50 | -8.615850e-47 |
| Msa0238950 | Msa0651890 | 0.838353 | 3.024183e-57 | -8.615850e-47 |
| Msa0240590 | Msa0651890 | -0.802502 | 5.441383e-49 | -8.615850e-47 |
| Msa0261460 | Msa0651890 | 0.812209 | 4.756033e-51 | -8.615850e-47 |
| Msa0266140 | Msa0651890 | -0.813103 | 3.032171e-51 | -8.615850e-47 |
| Msa0298400 | Msa0651890 | 0.818864 | 1.569121e-52 | -8.615850e-47 |
| Msa0304060 | Msa0651890 | -0.806240 | 9.054965e-50 | -8.615850e-47 |
| Msa0307380 | Msa0651890 | 0.882946 | 6.796772e-71 | -8.615850e-47 |
| Msa0308750 | Msa0651890 | 0.818116 | 2.318694e-52 | -8.615850e-47 |
| Msa0312640 | Msa0651890 | 0.815043 | 1.131323e-51 | -8.615850e-47 |
| Msa0316140 | Msa0651890 | 0.830461 | 2.899382e-55 | -8.615850e-47 |
| Msa0316740 | Msa0651890 | 0.819625 | 1.052593e-52 | -8.615850e-47 |
| Msa0334450 | Msa0651890 | -0.809871 | 1.527151e-50 | -8.615850e-47 |
| Msa0336120 | Msa0651890 | 0.811704 | 6.127372e-51 | -8.615850e-47 |
| Msa0339540 | Msa0651890 | 0.806000 | 1.017467e-49 | -8.615850e-47 |
| Msa0354970 | Msa0651890 | -0.830521 | 2.802316e-55 | -8.615850e-47 |
| Msa0355080 | Msa0651890 | -0.839587 | 1.449777e-57 | -8.615850e-47 |
| Msa0358470 | Msa0651890 | 0.804454 | 2.143436e-49 | -8.615850e-47 |
| Msa0491160 | Msa0651890 | -0.817565 | 3.087098e-52 | -8.615850e-47 |
| Msa0502900 | Msa0651890 | -0.800795 | 1.218511e-48 | -8.615850e-47 |
| Msa0522540 | Msa0651890 | 0.851735 | 7.310444e-61 | -8.615850e-47 |
| Msa0523420 | Msa0651890 | -0.836748 | 7.802115e-57 | -8.615850e-47 |
| Msa0523970 | Msa0651890 | 0.821728 | 3.460887e-53 | -8.615850e-47 |
| Msa0526490 | Msa0651890 | -0.858395 | 8.482038e-63 | -8.615850e-47 |
| Msa0526500 | Msa0651890 | -0.866608 | 2.517060e-65 | -8.615850e-47 |
| Msa0526520 | Msa0651890 | -0.801217 | 9.990843e-49 | -8.615850e-47 |
| Msa0533610 | Msa0651890 | -0.801674 | 8.056601e-49 | -8.615850e-47 |
| Msa0538050 | Msa0651890 | -0.803608 | 3.214475e-49 | -8.615850e-47 |
| Msa0548160 | Msa0651890 | -0.807876 | 4.079742e-50 | -8.615850e-47 |
| Msa0548420 | Msa0651890 | 0.810497 | 1.119423e-50 | -8.615850e-47 |
| Msa0559690 | Msa0651890 | -0.801479 | 8.831533e-49 | -8.615850e-47 |
| Msa0563440 | Msa0651890 | 0.937693 | 2.285466e-98 | -8.615850e-47 |
| Msa0566940 | Msa0651890 | -0.808521 | 2.973320e-50 | -8.615850e-47 |
| Msa0569580 | Msa0651890 | -0.839694 | 1.359582e-57 | -8.615850e-47 |
| Msa0569980 | Msa0651890 | -0.849985 | 2.274950e-60 | -8.615850e-47 |
| Msa0577690 | Msa0651890 | 0.848184 | 7.205631e-60 | -8.615850e-47 |
| Msa0578460 | Msa0651890 | 0.804338 | 2.265982e-49 | -8.615850e-47 |
| Msa0579080 | Msa0651890 | 0.815831 | 7.557432e-52 | -8.615850e-47 |
| Msa0587430 | Msa0651890 | 0.830129 | 3.493249e-55 | -8.615850e-47 |
| Msa0590620 | Msa0651890 | -0.810105 | 1.359691e-50 | -8.615850e-47 |
| Msa0602320 | Msa0651890 | -0.863902 | 1.786760e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0651890 | MtrunA17_Chr4g0045221 | 100.000 | 101 | 0 | 0 | 1 | 101 | 354 | 454 | 3.02e-68 | 211 |
| Msa0651890 | MtrunA17_Chr3g0133651 | 58.763 | 97 | 38 | 1 | 1 | 95 | 312 | 408 | 9.98e-31 | 112 |
| Msa0651890 | MtrunA17_Chr4g0074711 | 52.632 | 95 | 41 | 2 | 1 | 91 | 294 | 388 | 2.92e-25 | 97.4 |
| Msa0651890 | MtrunA17_Chr1g0153871 | 75.439 | 57 | 14 | 0 | 1 | 57 | 315 | 371 | 7.69e-25 | 96.3 |
| Msa0651890 | MtrunA17_Chr2g0288251 | 61.290 | 62 | 24 | 0 | 1 | 62 | 281 | 342 | 2.03e-21 | 86.7 |
| Msa0651890 | MtrunA17_Chr2g0328791 | 42.268 | 97 | 48 | 2 | 1 | 89 | 254 | 350 | 2.96e-18 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0651890 | AT1G47490.1 | 58.763 | 97 | 38 | 2 | 1 | 96 | 324 | 419 | 1.41e-29 | 109 |
| Msa0651890 | AT1G47500.1 | 58.763 | 97 | 38 | 2 | 1 | 96 | 326 | 421 | 1.43e-29 | 109 |
| Msa0651890 | AT1G49600.1 | 67.391 | 92 | 24 | 4 | 1 | 91 | 347 | 433 | 1.58e-29 | 109 |
| Msa0651890 | AT3G19130.1 | 80.952 | 63 | 11 | 1 | 1 | 63 | 341 | 402 | 4.53e-29 | 108 |
| Msa0651890 | AT1G49600.3 | 71.429 | 63 | 18 | 0 | 1 | 63 | 347 | 409 | 1.95e-23 | 92.8 |
| Msa0651890 | AT1G49600.2 | 71.429 | 63 | 18 | 0 | 1 | 63 | 347 | 409 | 1.95e-23 | 92.8 |
| Msa0651890 | AT1G11650.2 | 50.000 | 88 | 40 | 1 | 1 | 88 | 281 | 364 | 1.88e-21 | 87.4 |
| Msa0651890 | AT5G54900.1 | 51.190 | 84 | 41 | 0 | 1 | 84 | 280 | 363 | 4.32e-20 | 83.2 |
| Msa0651890 | AT4G27000.1 | 59.677 | 62 | 25 | 0 | 1 | 62 | 298 | 359 | 2.46e-19 | 81.3 |
| Msa0651890 | AT5G19350.2 | 38.211 | 123 | 53 | 2 | 1 | 100 | 253 | 375 | 1.08e-17 | 77.0 |
| Msa0651890 | AT5G19350.1 | 38.211 | 123 | 53 | 2 | 1 | 100 | 257 | 379 | 1.09e-17 | 77.0 |
Find 49 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTTAAGTGTCTGAAATTT+TGG | 0.087461 | 4_3:+59432505 | Msa0651890:three_prime_UTR |
| GAATGCTGAGGAAGCAATTC+AGG | 0.256444 | 4_3:+59431703 | Msa0651890:CDS |
| ATATTTGTAGCTGGGTTATA+TGG | 0.261838 | 4_3:+59432459 | Msa0651890:three_prime_UTR |
| GGATATGGTGGCCATGGATA+TGG | 0.328731 | 4_3:+59432284 | Msa0651890:CDS |
| AGCAGACAGTGCGTCTTTCT+TGG | 0.329108 | 4_3:+59431750 | Msa0651890:CDS |
| AAACTCACATGCTTATTTCC+TGG | 0.336224 | 4_3:-59431782 | None:intergenic |
| GCAGACAGTGCGTCTTTCTT+GGG | 0.339350 | 4_3:+59431751 | Msa0651890:CDS |
| TTGAACCTGACCATATAATA+TGG | 0.350372 | 4_3:+59432529 | Msa0651890:three_prime_UTR |
| GGTTATGGAGGTCATGGATA+TGG | 0.355121 | 4_3:+59432269 | Msa0651890:CDS |
| CAACCCGCTGCTGCAGTTCA+AGG | 0.361560 | 4_3:+59432350 | Msa0651890:CDS |
| TGCGAACTTGGTATTGAAAT+AGG | 0.368301 | 4_3:+59432393 | Msa0651890:three_prime_UTR |
| AGGAATGACTCTAATGGTTA+TGG | 0.376637 | 4_3:+59432254 | Msa0651890:CDS |
| ATCCGATTAAACTTGGCATT+TGG | 0.380748 | 4_3:-59432739 | None:intergenic |
| ATAACCTGAGCCATATTATA+TGG | 0.391372 | 4_3:-59432539 | None:intergenic |
| AATACTACAGTTCACTTAAG+AGG | 0.394469 | 4_3:-59432430 | None:intergenic |
| ATATGCTGCTAGACAAAATC+AGG | 0.422308 | 4_3:+59432316 | Msa0651890:CDS |
| GGATTGAATGGAACAGTGAT+TGG | 0.427017 | 4_3:+59431725 | Msa0651890:CDS |
| CTTTCTTGGGGTCGCAGTCC+AGG | 0.447144 | 4_3:+59431764 | Msa0651890:CDS |
| AACGGTCATAGCTGCGAACT+TGG | 0.452353 | 4_3:+59432381 | Msa0651890:exon |
| GTGAAAATCCCAGTCGGTAA+AGG | 0.454342 | 4_3:+59431323 | Msa0651890:CDS |
| GCCCCTTGAACTGCAGCAGC+GGG | 0.471724 | 4_3:-59432353 | None:intergenic |
| AACCCGCTGCTGCAGTTCAA+GGG | 0.482024 | 4_3:+59432351 | Msa0651890:CDS |
| GAAGCAATTCAGGGATTGAA+TGG | 0.482531 | 4_3:+59431713 | Msa0651890:CDS |
| CTGAGCCATATTATATGGTC+AGG | 0.483879 | 4_3:-59432534 | None:intergenic |
| TCTAATGGTTATGGAGGTCA+TGG | 0.506688 | 4_3:+59432263 | Msa0651890:CDS |
| AACTTGGTATTGAAATAGGA+TGG | 0.514847 | 4_3:+59432397 | Msa0651890:three_prime_UTR |
| AAACCACATCCTTTACCGAC+TGG | 0.519643 | 4_3:-59431332 | None:intergenic |
| AGCCCCTTGAACTGCAGCAG+CGG | 0.525089 | 4_3:-59432354 | None:intergenic |
| AGTTCGCAGCTATGACCGTT+AGG | 0.525342 | 4_3:-59432378 | None:intergenic |
| AACCACATCCTTTACCGACT+GGG | 0.528514 | 4_3:-59431331 | None:intergenic |
| AGCTGGGTTATATGGTACCC+AGG | 0.531631 | 4_3:+59432467 | Msa0651890:three_prime_UTR |
| ACCCGCTGCTGCAGTTCAAG+GGG | 0.535252 | 4_3:+59432352 | Msa0651890:CDS |
| ATATATAATCTTAATAACCC+TGG | 0.536162 | 4_3:-59432485 | None:intergenic |
| GGTCATGGATATGGTGGCCA+TGG | 0.539115 | 4_3:+59432278 | Msa0651890:CDS |
| ATCCATTACTTCCATATCCA+TGG | 0.539208 | 4_3:-59432295 | None:intergenic |
| CAGTGGAGGAATGACTCTAA+TGG | 0.541519 | 4_3:+59432248 | Msa0651890:intron |
| ATCCCAGTCGGTAAAGGATG+TGG | 0.548381 | 4_3:+59431329 | Msa0651890:CDS |
| TATATAATCTTAATAACCCT+GGG | 0.551426 | 4_3:-59432484 | None:intergenic |
| GGCCATGGATATGGAAGTAA+TGG | 0.553720 | 4_3:+59432293 | Msa0651890:CDS |
| AATGCTGAGGAAGCAATTCA+GGG | 0.562076 | 4_3:+59431704 | Msa0651890:CDS |
| ATACTACAGTTCACTTAAGA+GGG | 0.568801 | 4_3:-59432429 | None:intergenic |
| CTGACCATATAATATGGCTC+AGG | 0.575979 | 4_3:+59432535 | Msa0651890:three_prime_UTR |
| CAGTTCAAGGGGCTTCCTAA+CGG | 0.591153 | 4_3:+59432363 | Msa0651890:CDS |
| CAGACAGTGCGTCTTTCTTG+GGG | 0.601300 | 4_3:+59431752 | Msa0651890:CDS |
| ATCTCTGTGAAAATCCCAGT+CGG | 0.624783 | 4_3:+59431317 | Msa0651890:CDS |
| AATGACTCTAATGGTTATGG+AGG | 0.625005 | 4_3:+59432257 | Msa0651890:CDS |
| TATGGAGGTCATGGATATGG+TGG | 0.629902 | 4_3:+59432272 | Msa0651890:CDS |
| GCTGGGTTATATGGTACCCA+GGG | 0.634219 | 4_3:+59432468 | Msa0651890:three_prime_UTR |
| ATGTTACAGAAAGAATGCTG+AGG | 0.670854 | 4_3:+59431691 | Msa0651890:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GGAAATTTTATAAAATAATT+TGG | - | chr4_3:59432024-59432043 | None:intergenic | 10.0% |
| !!! | GGAAATTTTATAAAATAATT+TGG | - | chr4_3:59432024-59432043 | None:intergenic | 10.0% |
| !!! | ATTATTTTTATATTTGTAGC+TGG | + | chr4_3:59432450-59432469 | Msa0651890:three_prime_UTR | 15.0% |
| !!! | TTATTTTTATATTTGTAGCT+GGG | + | chr4_3:59432451-59432470 | Msa0651890:three_prime_UTR | 15.0% |
| !! | AATTAAAAAGACAATGTTAA+TGG | + | chr4_3:59432709-59432728 | Msa0651890:three_prime_UTR | 15.0% |
| !!! | ATTATTTTTATATTTGTAGC+TGG | + | chr4_3:59432450-59432469 | Msa0651890:three_prime_UTR | 15.0% |
| !!! | TTATTTTTATATTTGTAGCT+GGG | + | chr4_3:59432451-59432470 | Msa0651890:three_prime_UTR | 15.0% |
| !! | AATTAAAAAGACAATGTTAA+TGG | + | chr4_3:59432709-59432728 | Msa0651890:three_prime_UTR | 15.0% |
| !! | AAAAATAAGACGATACATAT+TGG | - | chr4_3:59431627-59431646 | None:intergenic | 20.0% |
| !!! | TTGTTGTTATATTTTCACTT+TGG | + | chr4_3:59431827-59431846 | Msa0651890:intron | 20.0% |
| !!! | AAAAGTGAGAATTCATTTTA+GGG | - | chr4_3:59432152-59432171 | None:intergenic | 20.0% |
| !!! | TAAAAGTGAGAATTCATTTT+AGG | - | chr4_3:59432153-59432172 | None:intergenic | 20.0% |
| !! | ATGATATAAGATTACTTGAT+TGG | - | chr4_3:59432189-59432208 | None:intergenic | 20.0% |
| !! | ACAAAGAATTAAATTAGAGA+TGG | - | chr4_3:59432221-59432240 | None:intergenic | 20.0% |
| !! | TATATAATCTTAATAACCCT+GGG | - | chr4_3:59432487-59432506 | None:intergenic | 20.0% |
| !! | ATATATAATCTTAATAACCC+TGG | - | chr4_3:59432488-59432507 | None:intergenic | 20.0% |
| !!! | TATTTAAGTGTCTGAAATTT+TGG | + | chr4_3:59432505-59432524 | Msa0651890:three_prime_UTR | 20.0% |
| !! | AAAAATAAGACGATACATAT+TGG | - | chr4_3:59431627-59431646 | None:intergenic | 20.0% |
| !!! | TTGTTGTTATATTTTCACTT+TGG | + | chr4_3:59431827-59431846 | Msa0651890:intron | 20.0% |
| !!! | AAAAGTGAGAATTCATTTTA+GGG | - | chr4_3:59432152-59432171 | None:intergenic | 20.0% |
| !!! | TAAAAGTGAGAATTCATTTT+AGG | - | chr4_3:59432153-59432172 | None:intergenic | 20.0% |
| !! | ATGATATAAGATTACTTGAT+TGG | - | chr4_3:59432189-59432208 | None:intergenic | 20.0% |
| !! | ACAAAGAATTAAATTAGAGA+TGG | - | chr4_3:59432221-59432240 | None:intergenic | 20.0% |
| !! | TATATAATCTTAATAACCCT+GGG | - | chr4_3:59432487-59432506 | None:intergenic | 20.0% |
| !! | ATATATAATCTTAATAACCC+TGG | - | chr4_3:59432488-59432507 | None:intergenic | 20.0% |
| !!! | TATTTAAGTGTCTGAAATTT+TGG | + | chr4_3:59432505-59432524 | Msa0651890:three_prime_UTR | 20.0% |
| ! | GACTTCATAATCAAAATCTA+AGG | - | chr4_3:59432130-59432149 | None:intergenic | 25.0% |
| !!! | TAATTTTAGCTGTCTACTAA+TGG | - | chr4_3:59432583-59432602 | None:intergenic | 25.0% |
| ! | GACTTCATAATCAAAATCTA+AGG | - | chr4_3:59432130-59432149 | None:intergenic | 25.0% |
| !!! | TAATTTTAGCTGTCTACTAA+TGG | - | chr4_3:59432583-59432602 | None:intergenic | 25.0% |
| ACGATCTATATCTATGCTAA+GGG | - | chr4_3:59431391-59431410 | None:intergenic | 30.0% | |
| TACGATCTATATCTATGCTA+AGG | - | chr4_3:59431392-59431411 | None:intergenic | 30.0% | |
| TAAGTATTCCTCAAATGGAT+AGG | + | chr4_3:59431479-59431498 | Msa0651890:intron | 30.0% | |
| AAGTATTCCTCAAATGGATA+GGG | + | chr4_3:59431480-59431499 | Msa0651890:intron | 30.0% | |
| !!! | TGTATCGTCTTATTTTTGAC+TGG | + | chr4_3:59431630-59431649 | Msa0651890:intron | 30.0% |
| !!! | GTATCGTCTTATTTTTGACT+GGG | + | chr4_3:59431631-59431650 | Msa0651890:intron | 30.0% |
| TTAGTACACAAACTTAGAAC+AGG | - | chr4_3:59431899-59431918 | None:intergenic | 30.0% | |
| TTTAGTAGTGTAAGCAATAC+AGG | + | chr4_3:59431938-59431957 | Msa0651890:intron | 30.0% | |
| ! | AACTTGGTATTGAAATAGGA+TGG | + | chr4_3:59432397-59432416 | Msa0651890:three_prime_UTR | 30.0% |
| ATACTACAGTTCACTTAAGA+GGG | - | chr4_3:59432432-59432451 | None:intergenic | 30.0% | |
| AATACTACAGTTCACTTAAG+AGG | - | chr4_3:59432433-59432452 | None:intergenic | 30.0% | |
| ATATTTGTAGCTGGGTTATA+TGG | + | chr4_3:59432459-59432478 | Msa0651890:three_prime_UTR | 30.0% | |
| TTGAACCTGACCATATAATA+TGG | + | chr4_3:59432529-59432548 | Msa0651890:three_prime_UTR | 30.0% | |
| ATAACCTGAGCCATATTATA+TGG | - | chr4_3:59432542-59432561 | None:intergenic | 30.0% | |
| ACGATCTATATCTATGCTAA+GGG | - | chr4_3:59431391-59431410 | None:intergenic | 30.0% | |
| TACGATCTATATCTATGCTA+AGG | - | chr4_3:59431392-59431411 | None:intergenic | 30.0% | |
| TAAGTATTCCTCAAATGGAT+AGG | + | chr4_3:59431479-59431498 | Msa0651890:intron | 30.0% | |
| AAGTATTCCTCAAATGGATA+GGG | + | chr4_3:59431480-59431499 | Msa0651890:intron | 30.0% | |
| !!! | TGTATCGTCTTATTTTTGAC+TGG | + | chr4_3:59431630-59431649 | Msa0651890:intron | 30.0% |
| !!! | GTATCGTCTTATTTTTGACT+GGG | + | chr4_3:59431631-59431650 | Msa0651890:intron | 30.0% |
| TTAGTACACAAACTTAGAAC+AGG | - | chr4_3:59431899-59431918 | None:intergenic | 30.0% | |
| TTTAGTAGTGTAAGCAATAC+AGG | + | chr4_3:59431938-59431957 | Msa0651890:intron | 30.0% | |
| ! | AACTTGGTATTGAAATAGGA+TGG | + | chr4_3:59432397-59432416 | Msa0651890:three_prime_UTR | 30.0% |
| ATACTACAGTTCACTTAAGA+GGG | - | chr4_3:59432432-59432451 | None:intergenic | 30.0% | |
| AATACTACAGTTCACTTAAG+AGG | - | chr4_3:59432433-59432452 | None:intergenic | 30.0% | |
| ATATTTGTAGCTGGGTTATA+TGG | + | chr4_3:59432459-59432478 | Msa0651890:three_prime_UTR | 30.0% | |
| TTGAACCTGACCATATAATA+TGG | + | chr4_3:59432529-59432548 | Msa0651890:three_prime_UTR | 30.0% | |
| ATAACCTGAGCCATATTATA+TGG | - | chr4_3:59432542-59432561 | None:intergenic | 30.0% | |
| TGGCATAAGTATTCCTCAAA+TGG | + | chr4_3:59431474-59431493 | Msa0651890:intron | 35.0% | |
| ATGAAGAGTTGGCATAATCA+AGG | - | chr4_3:59431509-59431528 | None:intergenic | 35.0% | |
| TCTGTAACATAAAGAGCAGA+AGG | - | chr4_3:59431681-59431700 | None:intergenic | 35.0% | |
| ATGTTACAGAAAGAATGCTG+AGG | + | chr4_3:59431691-59431710 | Msa0651890:intron | 35.0% | |
| AAACTCACATGCTTATTTCC+TGG | - | chr4_3:59431785-59431804 | None:intergenic | 35.0% | |
| ! | TTTTCACTTTGGCCATCTAA+TGG | + | chr4_3:59431838-59431857 | Msa0651890:intron | 35.0% |
| TTTCACTTTGGCCATCTAAT+GGG | + | chr4_3:59431839-59431858 | Msa0651890:intron | 35.0% | |
| ! | CTCGTAATTTTCCCATTAGA+TGG | - | chr4_3:59431853-59431872 | None:intergenic | 35.0% |
| ! | ATGCTGAAGGTATATGAATG+CGG | - | chr4_3:59432045-59432064 | None:intergenic | 35.0% |
| AGGAATGACTCTAATGGTTA+TGG | + | chr4_3:59432254-59432273 | Msa0651890:CDS | 35.0% | |
| AATGACTCTAATGGTTATGG+AGG | + | chr4_3:59432257-59432276 | Msa0651890:CDS | 35.0% | |
| ATCCATTACTTCCATATCCA+TGG | - | chr4_3:59432298-59432317 | None:intergenic | 35.0% | |
| ATATGCTGCTAGACAAAATC+AGG | + | chr4_3:59432316-59432335 | Msa0651890:CDS | 35.0% | |
| ! | TGCGAACTTGGTATTGAAAT+AGG | + | chr4_3:59432393-59432412 | Msa0651890:three_prime_UTR | 35.0% |
| TGGCATAAGTATTCCTCAAA+TGG | + | chr4_3:59431474-59431493 | Msa0651890:intron | 35.0% | |
| ATGAAGAGTTGGCATAATCA+AGG | - | chr4_3:59431509-59431528 | None:intergenic | 35.0% | |
| TCTGTAACATAAAGAGCAGA+AGG | - | chr4_3:59431681-59431700 | None:intergenic | 35.0% | |
| ATGTTACAGAAAGAATGCTG+AGG | + | chr4_3:59431691-59431710 | Msa0651890:intron | 35.0% | |
| AAACTCACATGCTTATTTCC+TGG | - | chr4_3:59431785-59431804 | None:intergenic | 35.0% | |
| ! | TTTTCACTTTGGCCATCTAA+TGG | + | chr4_3:59431838-59431857 | Msa0651890:intron | 35.0% |
| TTTCACTTTGGCCATCTAAT+GGG | + | chr4_3:59431839-59431858 | Msa0651890:intron | 35.0% | |
| ! | CTCGTAATTTTCCCATTAGA+TGG | - | chr4_3:59431853-59431872 | None:intergenic | 35.0% |
| ! | ATGCTGAAGGTATATGAATG+CGG | - | chr4_3:59432045-59432064 | None:intergenic | 35.0% |
| AGGAATGACTCTAATGGTTA+TGG | + | chr4_3:59432254-59432273 | Msa0651890:CDS | 35.0% | |
| AATGACTCTAATGGTTATGG+AGG | + | chr4_3:59432257-59432276 | Msa0651890:CDS | 35.0% | |
| ATCCATTACTTCCATATCCA+TGG | - | chr4_3:59432298-59432317 | None:intergenic | 35.0% | |
| ATATGCTGCTAGACAAAATC+AGG | + | chr4_3:59432316-59432335 | Msa0651890:CDS | 35.0% | |
| ! | TGCGAACTTGGTATTGAAAT+AGG | + | chr4_3:59432393-59432412 | Msa0651890:three_prime_UTR | 35.0% |
| ATCTCTGTGAAAATCCCAGT+CGG | + | chr4_3:59431317-59431336 | Msa0651890:CDS | 40.0% | |
| !!! | GTTTTGTTCAACTTGCTGAC+AGG | + | chr4_3:59431351-59431370 | Msa0651890:CDS | 40.0% |
| GTTTCTTGCGAAATGAACAG+TGG | + | chr4_3:59431454-59431473 | Msa0651890:intron | 40.0% | |
| AAGGATTCCCTATCCATTTG+AGG | - | chr4_3:59431490-59431509 | None:intergenic | 40.0% | |
| TCATCCTGTGGAATCATGTA+AGG | + | chr4_3:59431525-59431544 | Msa0651890:intron | 40.0% | |
| TCATCCTTACATGATTCCAC+AGG | - | chr4_3:59431532-59431551 | None:intergenic | 40.0% | |
| TGTGGAATCATGTAAGGATG+AGG | + | chr4_3:59431531-59431550 | Msa0651890:intron | 40.0% | |
| !!! | TCGTCTTATTTTTGACTGGG+TGG | + | chr4_3:59431634-59431653 | Msa0651890:intron | 40.0% |
| AATGCTGAGGAAGCAATTCA+GGG | + | chr4_3:59431704-59431723 | Msa0651890:CDS | 40.0% | |
| GAAGCAATTCAGGGATTGAA+TGG | + | chr4_3:59431713-59431732 | Msa0651890:CDS | 40.0% | |
| GGATTGAATGGAACAGTGAT+TGG | + | chr4_3:59431725-59431744 | Msa0651890:CDS | 40.0% | |
| AGCAACTAGTTACATGCTGA+AGG | - | chr4_3:59432058-59432077 | None:intergenic | 40.0% | |
| AATTCTTTGTGATGTCGCAG+TGG | + | chr4_3:59432231-59432250 | Msa0651890:intron | 40.0% | |
| TCTAATGGTTATGGAGGTCA+TGG | + | chr4_3:59432263-59432282 | Msa0651890:CDS | 40.0% | |
| CTGAGCCATATTATATGGTC+AGG | - | chr4_3:59432537-59432556 | None:intergenic | 40.0% | |
| CTGACCATATAATATGGCTC+AGG | + | chr4_3:59432535-59432554 | Msa0651890:three_prime_UTR | 40.0% | |
| ATCTCTGTGAAAATCCCAGT+CGG | + | chr4_3:59431317-59431336 | Msa0651890:CDS | 40.0% | |
| !!! | GTTTTGTTCAACTTGCTGAC+AGG | + | chr4_3:59431351-59431370 | Msa0651890:CDS | 40.0% |
| GTTTCTTGCGAAATGAACAG+TGG | + | chr4_3:59431454-59431473 | Msa0651890:intron | 40.0% | |
| AAGGATTCCCTATCCATTTG+AGG | - | chr4_3:59431490-59431509 | None:intergenic | 40.0% | |
| TCATCCTGTGGAATCATGTA+AGG | + | chr4_3:59431525-59431544 | Msa0651890:intron | 40.0% | |
| TCATCCTTACATGATTCCAC+AGG | - | chr4_3:59431532-59431551 | None:intergenic | 40.0% | |
| TGTGGAATCATGTAAGGATG+AGG | + | chr4_3:59431531-59431550 | Msa0651890:intron | 40.0% | |
| !!! | TCGTCTTATTTTTGACTGGG+TGG | + | chr4_3:59431634-59431653 | Msa0651890:intron | 40.0% |
| AATGCTGAGGAAGCAATTCA+GGG | + | chr4_3:59431704-59431723 | Msa0651890:CDS | 40.0% | |
| GAAGCAATTCAGGGATTGAA+TGG | + | chr4_3:59431713-59431732 | Msa0651890:CDS | 40.0% | |
| GGATTGAATGGAACAGTGAT+TGG | + | chr4_3:59431725-59431744 | Msa0651890:CDS | 40.0% | |
| AGCAACTAGTTACATGCTGA+AGG | - | chr4_3:59432058-59432077 | None:intergenic | 40.0% | |
| AATTCTTTGTGATGTCGCAG+TGG | + | chr4_3:59432231-59432250 | Msa0651890:intron | 40.0% | |
| TCTAATGGTTATGGAGGTCA+TGG | + | chr4_3:59432263-59432282 | Msa0651890:CDS | 40.0% | |
| CTGAGCCATATTATATGGTC+AGG | - | chr4_3:59432537-59432556 | None:intergenic | 40.0% | |
| CTGACCATATAATATGGCTC+AGG | + | chr4_3:59432535-59432554 | Msa0651890:three_prime_UTR | 40.0% | |
| GTGAAAATCCCAGTCGGTAA+AGG | + | chr4_3:59431323-59431342 | Msa0651890:CDS | 45.0% | |
| ! | AACCACATCCTTTACCGACT+GGG | - | chr4_3:59431334-59431353 | None:intergenic | 45.0% |
| AAACCACATCCTTTACCGAC+TGG | - | chr4_3:59431335-59431354 | None:intergenic | 45.0% | |
| TATGCCAACTCTTCATCCTG+TGG | + | chr4_3:59431513-59431532 | Msa0651890:intron | 45.0% | |
| GATTCCACAGGATGAAGAGT+TGG | - | chr4_3:59431520-59431539 | None:intergenic | 45.0% | |
| GAATGCTGAGGAAGCAATTC+AGG | + | chr4_3:59431703-59431722 | Msa0651890:CDS | 45.0% | |
| GTCTCGTTCTCTCTGTAATC+AGG | + | chr4_3:59431872-59431891 | Msa0651890:intron | 45.0% | |
| CAGTGGAGGAATGACTCTAA+TGG | + | chr4_3:59432248-59432267 | Msa0651890:intron | 45.0% | |
| GGTTATGGAGGTCATGGATA+TGG | + | chr4_3:59432269-59432288 | Msa0651890:CDS | 45.0% | |
| TATGGAGGTCATGGATATGG+TGG | + | chr4_3:59432272-59432291 | Msa0651890:CDS | 45.0% | |
| GGCCATGGATATGGAAGTAA+TGG | + | chr4_3:59432293-59432312 | Msa0651890:CDS | 45.0% | |
| GTGAAAATCCCAGTCGGTAA+AGG | + | chr4_3:59431323-59431342 | Msa0651890:CDS | 45.0% | |
| ! | AACCACATCCTTTACCGACT+GGG | - | chr4_3:59431334-59431353 | None:intergenic | 45.0% |
| AAACCACATCCTTTACCGAC+TGG | - | chr4_3:59431335-59431354 | None:intergenic | 45.0% | |
| TATGCCAACTCTTCATCCTG+TGG | + | chr4_3:59431513-59431532 | Msa0651890:intron | 45.0% | |
| GATTCCACAGGATGAAGAGT+TGG | - | chr4_3:59431520-59431539 | None:intergenic | 45.0% | |
| GAATGCTGAGGAAGCAATTC+AGG | + | chr4_3:59431703-59431722 | Msa0651890:CDS | 45.0% | |
| GTCTCGTTCTCTCTGTAATC+AGG | + | chr4_3:59431872-59431891 | Msa0651890:intron | 45.0% | |
| CAGTGGAGGAATGACTCTAA+TGG | + | chr4_3:59432248-59432267 | Msa0651890:intron | 45.0% | |
| GGTTATGGAGGTCATGGATA+TGG | + | chr4_3:59432269-59432288 | Msa0651890:CDS | 45.0% | |
| TATGGAGGTCATGGATATGG+TGG | + | chr4_3:59432272-59432291 | Msa0651890:CDS | 45.0% | |
| GGCCATGGATATGGAAGTAA+TGG | + | chr4_3:59432293-59432312 | Msa0651890:CDS | 45.0% | |
| ATCCCAGTCGGTAAAGGATG+TGG | + | chr4_3:59431329-59431348 | Msa0651890:CDS | 50.0% | |
| CTTGCTGACAGGTACACTTG+TGG | + | chr4_3:59431362-59431381 | Msa0651890:intron | 50.0% | |
| AGCAGACAGTGCGTCTTTCT+TGG | + | chr4_3:59431750-59431769 | Msa0651890:CDS | 50.0% | |
| GCAGACAGTGCGTCTTTCTT+GGG | + | chr4_3:59431751-59431770 | Msa0651890:CDS | 50.0% | |
| CAGACAGTGCGTCTTTCTTG+GGG | + | chr4_3:59431752-59431771 | Msa0651890:CDS | 50.0% | |
| TCTTTGTGATGTCGCAGTGG+AGG | + | chr4_3:59432234-59432253 | Msa0651890:intron | 50.0% | |
| GGATATGGTGGCCATGGATA+TGG | + | chr4_3:59432284-59432303 | Msa0651890:CDS | 50.0% | |
| CAGTTCAAGGGGCTTCCTAA+CGG | + | chr4_3:59432363-59432382 | Msa0651890:CDS | 50.0% | |
| AGTTCGCAGCTATGACCGTT+AGG | - | chr4_3:59432381-59432400 | None:intergenic | 50.0% | |
| AACGGTCATAGCTGCGAACT+TGG | + | chr4_3:59432381-59432400 | Msa0651890:exon | 50.0% | |
| AGCTGGGTTATATGGTACCC+AGG | + | chr4_3:59432467-59432486 | Msa0651890:three_prime_UTR | 50.0% | |
| GCTGGGTTATATGGTACCCA+GGG | + | chr4_3:59432468-59432487 | Msa0651890:three_prime_UTR | 50.0% | |
| ATCCCAGTCGGTAAAGGATG+TGG | + | chr4_3:59431329-59431348 | Msa0651890:CDS | 50.0% | |
| CTTGCTGACAGGTACACTTG+TGG | + | chr4_3:59431362-59431381 | Msa0651890:intron | 50.0% | |
| AGCAGACAGTGCGTCTTTCT+TGG | + | chr4_3:59431750-59431769 | Msa0651890:CDS | 50.0% | |
| GCAGACAGTGCGTCTTTCTT+GGG | + | chr4_3:59431751-59431770 | Msa0651890:CDS | 50.0% | |
| CAGACAGTGCGTCTTTCTTG+GGG | + | chr4_3:59431752-59431771 | Msa0651890:CDS | 50.0% | |
| TCTTTGTGATGTCGCAGTGG+AGG | + | chr4_3:59432234-59432253 | Msa0651890:intron | 50.0% | |
| GGATATGGTGGCCATGGATA+TGG | + | chr4_3:59432284-59432303 | Msa0651890:CDS | 50.0% | |
| CAGTTCAAGGGGCTTCCTAA+CGG | + | chr4_3:59432363-59432382 | Msa0651890:CDS | 50.0% | |
| AGTTCGCAGCTATGACCGTT+AGG | - | chr4_3:59432381-59432400 | None:intergenic | 50.0% | |
| AACGGTCATAGCTGCGAACT+TGG | + | chr4_3:59432381-59432400 | Msa0651890:exon | 50.0% | |
| AGCTGGGTTATATGGTACCC+AGG | + | chr4_3:59432467-59432486 | Msa0651890:three_prime_UTR | 50.0% | |
| GCTGGGTTATATGGTACCCA+GGG | + | chr4_3:59432468-59432487 | Msa0651890:three_prime_UTR | 50.0% | |
| GGTCATGGATATGGTGGCCA+TGG | + | chr4_3:59432278-59432297 | Msa0651890:CDS | 55.0% | |
| AACCCGCTGCTGCAGTTCAA+GGG | + | chr4_3:59432351-59432370 | Msa0651890:CDS | 55.0% | |
| GGTCATGGATATGGTGGCCA+TGG | + | chr4_3:59432278-59432297 | Msa0651890:CDS | 55.0% | |
| AACCCGCTGCTGCAGTTCAA+GGG | + | chr4_3:59432351-59432370 | Msa0651890:CDS | 55.0% | |
| TTGCAACCCCCACAGCACAG+TGG | + | chr4_3:59431428-59431447 | Msa0651890:intron | 60.0% | |
| TGCAACCCCCACAGCACAGT+GGG | + | chr4_3:59431429-59431448 | Msa0651890:intron | 60.0% | |
| AAACCGCCCACTGTGCTGTG+GGG | - | chr4_3:59431438-59431457 | None:intergenic | 60.0% | |
| GAAACCGCCCACTGTGCTGT+GGG | - | chr4_3:59431439-59431458 | None:intergenic | 60.0% | |
| AGAAACCGCCCACTGTGCTG+TGG | - | chr4_3:59431440-59431459 | None:intergenic | 60.0% | |
| CTTTCTTGGGGTCGCAGTCC+AGG | + | chr4_3:59431764-59431783 | Msa0651890:CDS | 60.0% | |
| CAACCCGCTGCTGCAGTTCA+AGG | + | chr4_3:59432350-59432369 | Msa0651890:CDS | 60.0% | |
| ACCCGCTGCTGCAGTTCAAG+GGG | + | chr4_3:59432352-59432371 | Msa0651890:CDS | 60.0% | |
| AGCCCCTTGAACTGCAGCAG+CGG | - | chr4_3:59432357-59432376 | None:intergenic | 60.0% | |
| TTGCAACCCCCACAGCACAG+TGG | + | chr4_3:59431428-59431447 | Msa0651890:intron | 60.0% | |
| TGCAACCCCCACAGCACAGT+GGG | + | chr4_3:59431429-59431448 | Msa0651890:intron | 60.0% | |
| AAACCGCCCACTGTGCTGTG+GGG | - | chr4_3:59431438-59431457 | None:intergenic | 60.0% | |
| GAAACCGCCCACTGTGCTGT+GGG | - | chr4_3:59431439-59431458 | None:intergenic | 60.0% | |
| AGAAACCGCCCACTGTGCTG+TGG | - | chr4_3:59431440-59431459 | None:intergenic | 60.0% | |
| CTTTCTTGGGGTCGCAGTCC+AGG | + | chr4_3:59431764-59431783 | Msa0651890:CDS | 60.0% | |
| CAACCCGCTGCTGCAGTTCA+AGG | + | chr4_3:59432350-59432369 | Msa0651890:CDS | 60.0% | |
| ACCCGCTGCTGCAGTTCAAG+GGG | + | chr4_3:59432352-59432371 | Msa0651890:CDS | 60.0% | |
| AGCCCCTTGAACTGCAGCAG+CGG | - | chr4_3:59432357-59432376 | None:intergenic | 60.0% | |
| AACCCCCACAGCACAGTGGG+CGG | + | chr4_3:59431432-59431451 | Msa0651890:intron | 65.0% | |
| AACCGCCCACTGTGCTGTGG+GGG | - | chr4_3:59431437-59431456 | None:intergenic | 65.0% | |
| GCCCCTTGAACTGCAGCAGC+GGG | - | chr4_3:59432356-59432375 | None:intergenic | 65.0% | |
| AACCCCCACAGCACAGTGGG+CGG | + | chr4_3:59431432-59431451 | Msa0651890:intron | 65.0% | |
| AACCGCCCACTGTGCTGTGG+GGG | - | chr4_3:59431437-59431456 | None:intergenic | 65.0% | |
| GCCCCTTGAACTGCAGCAGC+GGG | - | chr4_3:59432356-59432375 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 59431296 | 59432750 | 59431296 | ID=Msa0651890;Name=Msa0651890 |
| chr4_3 | mRNA | 59431296 | 59432750 | 59431296 | ID=Msa0651890-mRNA-1;Parent=Msa0651890;Name=Msa0651890-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|1|1|0.5|0.66|3|368|101 |
| chr4_3 | exon | 59431296 | 59431372 | 59431296 | ID=Msa0651890-mRNA-1:exon:15915;Parent=Msa0651890-mRNA-1 |
| chr4_3 | exon | 59431700 | 59431796 | 59431700 | ID=Msa0651890-mRNA-1:exon:15916;Parent=Msa0651890-mRNA-1 |
| chr4_3 | exon | 59432251 | 59432750 | 59432251 | ID=Msa0651890-mRNA-1:exon:15917;Parent=Msa0651890-mRNA-1 |
| chr4_3 | CDS | 59431296 | 59431372 | 59431296 | ID=Msa0651890-mRNA-1:cds;Parent=Msa0651890-mRNA-1 |
| chr4_3 | CDS | 59431700 | 59431796 | 59431700 | ID=Msa0651890-mRNA-1:cds;Parent=Msa0651890-mRNA-1 |
| chr4_3 | CDS | 59432251 | 59432382 | 59432251 | ID=Msa0651890-mRNA-1:cds;Parent=Msa0651890-mRNA-1 |
| chr4_3 | three_prime_UTR | 59432383 | 59432750 | 59432383 | ID=Msa0651890-mRNA-1:three_prime_utr;Parent=Msa0651890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
