Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0608490 | XP_003608336.2 | 90.827 | 556 | 20 | 2 | 1 | 553 | 1 | 528 | 0.0 | 1006 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0608490 | sp|Q9FLG8|SPNS2_ARATH | 62.900 | 531 | 131 | 6 | 21 | 544 | 12 | 483 | 0.0 | 648 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0608490 | G7JTZ9 | 90.827 | 556 | 20 | 2 | 1 | 553 | 1 | 528 | 0.0 | 1006 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044990 | Msa0608490 | -0.809904 | 1.502572e-50 | -8.615850e-47 |
| Msa0115870 | Msa0608490 | -0.837446 | 5.174384e-57 | -8.615850e-47 |
| Msa0608490 | Msa0649010 | 0.858826 | 6.308591e-63 | -8.615850e-47 |
| Msa0608490 | Msa0649040 | 0.944285 | 2.579334e-103 | -8.615850e-47 |
| Msa0608490 | Msa0654520 | 0.833728 | 4.514717e-56 | -8.615850e-47 |
| Msa0608490 | Msa0691520 | 0.956701 | 1.582921e-114 | -8.615850e-47 |
| Msa0608490 | Msa1420430 | -0.827726 | 1.333894e-54 | -8.615850e-47 |
| Msa0608490 | Msa1445370 | -0.827681 | 1.367772e-54 | -8.615850e-47 |
| Msa0554910 | Msa0608490 | 0.964078 | 7.093394e-123 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0608490 | MtrunA17_Chr4g0049371 | 90.827 | 556 | 20 | 2 | 1 | 553 | 1 | 528 | 0.0 | 1006 |
| Msa0608490 | MtrunA17_Chr2g0280091 | 66.860 | 516 | 115 | 6 | 25 | 528 | 1 | 472 | 0.0 | 677 |
| Msa0608490 | MtrunA17_Chr5g0411431 | 64.299 | 521 | 147 | 5 | 29 | 543 | 1 | 488 | 0.0 | 666 |
| Msa0608490 | MtrunA17_Chr2g0280101 | 69.302 | 215 | 31 | 2 | 60 | 271 | 1 | 183 | 1.79e-98 | 297 |
| Msa0608490 | MtrunA17_Chr2g0280111 | 57.143 | 252 | 54 | 3 | 307 | 553 | 13 | 215 | 1.55e-88 | 272 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0608490 | AT2G22730.3 | 62.569 | 545 | 155 | 8 | 1 | 525 | 1 | 516 | 0.0 | 661 |
| Msa0608490 | AT5G64500.1 | 62.900 | 531 | 131 | 6 | 21 | 544 | 12 | 483 | 0.0 | 648 |
| Msa0608490 | AT2G22730.2 | 62.477 | 533 | 151 | 8 | 1 | 513 | 1 | 504 | 0.0 | 642 |
| Msa0608490 | AT2G22730.6 | 62.289 | 533 | 152 | 7 | 1 | 526 | 1 | 491 | 0.0 | 639 |
| Msa0608490 | AT2G22730.1 | 62.308 | 520 | 147 | 7 | 1 | 513 | 1 | 478 | 0.0 | 620 |
| Msa0608490 | AT5G65687.1 | 58.350 | 497 | 163 | 8 | 32 | 523 | 12 | 469 | 0.0 | 574 |
| Msa0608490 | AT2G22730.7 | 62.670 | 442 | 121 | 6 | 107 | 534 | 1 | 412 | 0.0 | 542 |
| Msa0608490 | AT2G22730.5 | 58.963 | 463 | 141 | 8 | 1 | 443 | 1 | 434 | 3.56e-179 | 515 |
| Msa0608490 | AT2G22730.4 | 57.421 | 411 | 126 | 7 | 1 | 404 | 1 | 369 | 1.12e-150 | 437 |
Find 167 sgRNAs with CRISPR-Local
Find 550 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGGTCTTTCTTTCAATTTC+TGG | 0.022632 | 4_2:+55655264 | Msa0608490:CDS |
| CACCCTATCAAATGCATTTA+AGG | 0.038973 | 4_2:+55658367 | Msa0608490:CDS |
| GATGCTTCCATTTGCTATTT+TGG | 0.067366 | 4_2:+55656479 | Msa0608490:CDS |
| TGGATGGATTATCCTTTATT+TGG | 0.124107 | 4_2:-55652806 | None:intergenic |
| GTAAACCCCTTTAGACTTAT+TGG | 0.127810 | 4_2:+55655203 | Msa0608490:CDS |
| ACAAACTTGTGATTAGATTT+TGG | 0.163860 | 4_2:+55652350 | Msa0608490:five_prime_UTR |
| AATATTCTGTTTGCATGTTT+TGG | 0.190664 | 4_2:-55657746 | None:intergenic |
| CCATGATTCCTGCAACTTCT+TGG | 0.194316 | 4_2:+55653150 | Msa0608490:CDS |
| AATATAATATTATATATTAT+TGG | 0.200897 | 4_2:+55653026 | Msa0608490:five_prime_UTR |
| TACAATTGTATGCGGAATAT+TGG | 0.202232 | 4_2:+55658304 | Msa0608490:CDS |
| ATTATTAATTAAATAGAAAA+TGG | 0.207657 | 4_2:-55652970 | None:intergenic |
| CTTCTTGGTTTACACCAAAA+AGG | 0.250484 | 4_2:+55653165 | Msa0608490:CDS |
| AAACAGGTTGGAAGTCATTT+TGG | 0.253591 | 4_2:+55656423 | Msa0608490:intron |
| ACTAATGCAGATATGATATT+TGG | 0.253804 | 4_2:+55658275 | Msa0608490:CDS |
| CATCGGTGCTTACTCGTATT+GGG | 0.254283 | 4_2:+55658059 | Msa0608490:CDS |
| GATTAACATGTTGAACTATT+TGG | 0.255328 | 4_2:+55653502 | Msa0608490:CDS |
| GCAGCTGCAATATGGTTTAT+TGG | 0.257585 | 4_2:+55660747 | Msa0608490:CDS |
| ATGAAGCCTTTGCAGTTAAA+AGG | 0.258410 | 4_2:+55656510 | Msa0608490:CDS |
| TTTGAAAGAGATGCAAATAT+TGG | 0.266920 | 4_2:-55654660 | None:intergenic |
| TCATCGGTGCTTACTCGTAT+TGG | 0.285278 | 4_2:+55658058 | Msa0608490:CDS |
| GGCAGTTGAGACAGTTCCTT+TGG | 0.285577 | 4_2:+55656644 | Msa0608490:CDS |
| TAGATTTGATACTAAACTTA+TGG | 0.293376 | 4_2:-55652235 | None:intergenic |
| GAAGGTTTCGGTTCATGTTC+AGG | 0.301999 | 4_2:-55653062 | None:intergenic |
| CAACCTTAAATGCATTTGAT+AGG | 0.304914 | 4_2:-55658370 | None:intergenic |
| TTGGAGTTGGATTGTCAGTT+TGG | 0.308512 | 4_2:+55655222 | Msa0608490:CDS |
| TATATACTATAACCAGCTTT+GGG | 0.324548 | 4_2:-55658084 | None:intergenic |
| GTTCCTTCCGCGCCTCTTGT+TGG | 0.325321 | 4_2:+55660556 | Msa0608490:CDS |
| TCCTTTATTTGGGTAATGTA+TGG | 0.328422 | 4_2:-55652795 | None:intergenic |
| AGAACAAGAACAAGAGAGTT+TGG | 0.328600 | 4_2:+55652869 | Msa0608490:five_prime_UTR |
| TGCAGGAATCATGGTGGACT+TGG | 0.331502 | 4_2:-55653141 | None:intergenic |
| TGGTTCTAACCTTCTTATAC+TGG | 0.334464 | 4_2:+55656034 | Msa0608490:CDS |
| ATGTTTATGTTTCACCATCT+TGG | 0.336990 | 4_2:+55661449 | Msa0608490:three_prime_UTR |
| TTGGTTGGCGTTATGCGTTT+TGG | 0.340113 | 4_2:+55656442 | Msa0608490:CDS |
| GTTAGAACCATAAAGAAAAT+AGG | 0.340881 | 4_2:-55656021 | None:intergenic |
| ATAGCTAGCAATGGTGTTAA+TGG | 0.342905 | 4_2:+55653536 | Msa0608490:CDS |
| ACAATTGTATGCGGAATATT+GGG | 0.345355 | 4_2:+55658305 | Msa0608490:CDS |
| TATTTAAATTCGCATATGAT+TGG | 0.352036 | 4_2:-55652754 | None:intergenic |
| GGATGGATTATCCTTTATTT+GGG | 0.359939 | 4_2:-55652805 | None:intergenic |
| CACAAGTTTGTTGTTGCTGC+AGG | 0.360309 | 4_2:-55652338 | None:intergenic |
| GCATAAAAGGTTATCAGAAA+TGG | 0.366960 | 4_2:-55652047 | None:intergenic |
| TCCATACATTACCCAAATAA+AGG | 0.367294 | 4_2:+55652794 | Msa0608490:five_prime_UTR |
| TGCTTGAAGATATTACAAAA+AGG | 0.368513 | 4_2:-55661039 | None:intergenic |
| ATATATACTATAACCAGCTT+TGG | 0.369080 | 4_2:-55658085 | None:intergenic |
| CATCAAAAGATATTACAAAA+AGG | 0.379177 | 4_2:-55661272 | None:intergenic |
| GGTTATCAGAAATGGACAAT+TGG | 0.381660 | 4_2:-55652039 | None:intergenic |
| GAAGTTGTTGTTGAAGGTTT+CGG | 0.387496 | 4_2:-55653074 | None:intergenic |
| TGTTTATGTTTCACCATCTT+GGG | 0.390266 | 4_2:+55661450 | Msa0608490:three_prime_UTR |
| GGTGTAAACCAAGAAGTTGC+AGG | 0.391820 | 4_2:-55653158 | None:intergenic |
| GGAATATTGGGCACTTTAGC+AGG | 0.393766 | 4_2:+55658317 | Msa0608490:CDS |
| CCAACTCCAATAAGTCTAAA+GGG | 0.394466 | 4_2:-55655209 | None:intergenic |
| CCCTTTAGACTTATTGGAGT+TGG | 0.397838 | 4_2:+55655209 | Msa0608490:CDS |
| ACTGTAGCTATTCATATATT+CGG | 0.404341 | 4_2:+55660529 | Msa0608490:CDS |
| TATGCAATTGGCTATGTATA+TGG | 0.405101 | 4_2:+55656113 | Msa0608490:CDS |
| ATTTAAATTCGCATATGATT+GGG | 0.410197 | 4_2:-55652753 | None:intergenic |
| GCCTCTTGTTGGAGTTGTCC+AGG | 0.411072 | 4_2:+55660567 | Msa0608490:CDS |
| GGTTAACCTTCTTGGGATTG+AGG | 0.418224 | 4_2:-55661018 | None:intergenic |
| CTCTCTAGGCTCGTTGGTGT+TGG | 0.418538 | 4_2:+55655427 | Msa0608490:intron |
| GTTATCAGAAATGGACAATT+GGG | 0.424495 | 4_2:-55652038 | None:intergenic |
| TTCGCATTCAAAAGCATGTA+TGG | 0.429280 | 4_2:+55658691 | Msa0608490:CDS |
| ACAGTTCCTTTGGGAGTTCA+AGG | 0.434203 | 4_2:+55656654 | Msa0608490:CDS |
| CAGGAATCATGGTGGACTTG+GGG | 0.437931 | 4_2:-55653139 | None:intergenic |
| ATGTTTGGTTCCACAGAAGA+AGG | 0.439639 | 4_2:-55653113 | None:intergenic |
| ATTGATAGTGGCCTCAAACT+TGG | 0.439716 | 4_2:-55660496 | None:intergenic |
| AAGTAACAAACCTGTGAAGC+TGG | 0.442495 | 4_2:-55655499 | None:intergenic |
| CACAGGATCATATTAACAAC+TGG | 0.443858 | 4_2:+55660685 | Msa0608490:intron |
| TCCAACTCCAATAAGTCTAA+AGG | 0.446511 | 4_2:-55655210 | None:intergenic |
| CATCATGTATCAAAGGTAGA+AGG | 0.453571 | 4_2:+55660955 | Msa0608490:CDS |
| ACAAATCCCAAAATAGCAAA+TGG | 0.454056 | 4_2:-55656486 | None:intergenic |
| TGTTGTTGCTGCAGGGTATG+AGG | 0.454305 | 4_2:-55652330 | None:intergenic |
| GCAGTTGAGACAGTTCCTTT+GGG | 0.456001 | 4_2:+55656645 | Msa0608490:CDS |
| GAAAGAAAGACCACAGCATA+AGG | 0.459452 | 4_2:-55655255 | None:intergenic |
| TATATGTTTGTATATGCAAT+CGG | 0.459477 | 4_2:+55661131 | Msa0608490:three_prime_UTR |
| CAAATCTACAACATTGATCA+TGG | 0.464271 | 4_2:+55652250 | Msa0608490:five_prime_UTR |
| GCAGGAATCATGGTGGACTT+GGG | 0.464706 | 4_2:-55653140 | None:intergenic |
| GTTCTTGTTGACAATGATGT+TGG | 0.465124 | 4_2:-55652851 | None:intergenic |
| GGTATCTGCAAGTCTGGAAC+AGG | 0.465998 | 4_2:+55653581 | Msa0608490:CDS |
| ATAAACCATATTGCAGCTGC+TGG | 0.467805 | 4_2:-55660744 | None:intergenic |
| CCAAGAAGTTGCAGGAATCA+TGG | 0.472191 | 4_2:-55653150 | None:intergenic |
| GAAGAAGAAGTTGTTGTTGA+AGG | 0.473005 | 4_2:-55653080 | None:intergenic |
| CCTGTCTTCTCTTCAAGCAA+TGG | 0.474940 | 4_2:-55661071 | None:intergenic |
| AACCTTAAATGCATTTGATA+GGG | 0.476183 | 4_2:-55658369 | None:intergenic |
| AAAGTGCTGGACACACGTTT+AGG | 0.477991 | 4_2:+55661154 | Msa0608490:three_prime_UTR |
| GGTTCCACAGAAGAAGGGTT+AGG | 0.479643 | 4_2:-55653107 | None:intergenic |
| TCGTATTGGGGCCCCAAAGC+TGG | 0.481238 | 4_2:+55658072 | Msa0608490:CDS |
| TTCTTCTGTGGAACCAAACA+TGG | 0.481946 | 4_2:+55653115 | Msa0608490:CDS |
| CTTATTCTCTCTAGGCTCGT+TGG | 0.482973 | 4_2:+55655421 | Msa0608490:intron |
| AAGTTTGAGGCCACTATCAA+TGG | 0.484428 | 4_2:+55660498 | Msa0608490:CDS |
| TGATAACGCCCCAGCTTCAC+AGG | 0.486992 | 4_2:+55655489 | Msa0608490:CDS |
| GAAATGGACAATTGGGTGGC+TGG | 0.494832 | 4_2:-55652031 | None:intergenic |
| GTAGACATAGCCATTGATAG+TGG | 0.500369 | 4_2:-55660508 | None:intergenic |
| CTCTTCAAGCAATGGTGCTG+TGG | 0.501555 | 4_2:-55661063 | None:intergenic |
| ACTGATGGTATCTGCAAGTC+TGG | 0.512923 | 4_2:+55653575 | Msa0608490:CDS |
| ATACCAGGCGGATATGCAAT+TGG | 0.513392 | 4_2:+55656101 | Msa0608490:CDS |
| CAAGAGAGTTTGGAAGCTGC+GGG | 0.514497 | 4_2:+55652879 | Msa0608490:five_prime_UTR |
| AATGAAAAGAAATAATAGAA+TGG | 0.519636 | 4_2:-55651963 | None:intergenic |
| TAAACCTTCTTCTTTCTACC+TGG | 0.522437 | 4_2:+55652924 | Msa0608490:five_prime_UTR |
| AATATTATATATTATTGGAA+TGG | 0.524557 | 4_2:+55653031 | Msa0608490:exon |
| AAATAGAAAATGGAGGTTGA+AGG | 0.524772 | 4_2:-55652960 | None:intergenic |
| TTGATACTAAACTTATGGTA+TGG | 0.525927 | 4_2:-55652230 | None:intergenic |
| GAGTGAGCATCATGTATCAA+AGG | 0.526813 | 4_2:+55660948 | Msa0608490:CDS |
| AGTAACAAACCTGTGAAGCT+GGG | 0.527094 | 4_2:-55655498 | None:intergenic |
| CTCTTCAAGCAACGGCGCAG+TGG | 0.528433 | 4_2:-55660983 | None:intergenic |
| TCGTCAAAGTGACGAGGATG+TGG | 0.531526 | 4_2:-55652826 | None:intergenic |
| ATTAATTAAATAGAAAATGG+AGG | 0.532992 | 4_2:-55652967 | None:intergenic |
| CTCTCATTGACAACATTAGT+CGG | 0.535284 | 4_2:+55658646 | Msa0608490:CDS |
| AATGCAGATATGATATTTGG+AGG | 0.536029 | 4_2:+55658278 | Msa0608490:CDS |
| GAAGGTAACAAAAGCATGCC+AGG | 0.539035 | 4_2:-55652942 | None:intergenic |
| GTTGTTGCTGCAGGGTATGA+GGG | 0.539375 | 4_2:-55652329 | None:intergenic |
| TTACATGCGACATAATGTAA+TGG | 0.544368 | 4_2:-55655288 | None:intergenic |
| AACACCTAACCCTTCTTCTG+TGG | 0.544683 | 4_2:+55653103 | Msa0608490:CDS |
| GGTAGTCAAAGCTAGATGAC+TGG | 0.544697 | 4_2:-55652209 | None:intergenic |
| CATTGCTAGCTATTGCTCCT+CGG | 0.549808 | 4_2:-55653526 | None:intergenic |
| CATGCCAGGTAGAAAGAAGA+AGG | 0.550575 | 4_2:-55652928 | None:intergenic |
| TTCTTGGGATTGAGGTTCTG+CGG | 0.555513 | 4_2:-55661010 | None:intergenic |
| GATACATAGCCAGTATAAGA+AGG | 0.558356 | 4_2:-55656043 | None:intergenic |
| GAGTGATTGAAGAAGAAGAA+AGG | 0.558849 | 4_2:-55651992 | None:intergenic |
| ACTCCAACAAGAGGCGCGGA+AGG | 0.560727 | 4_2:-55660559 | None:intergenic |
| TAGCCAATTGCATATCCGCC+TGG | 0.566626 | 4_2:-55656104 | None:intergenic |
| CAAAGTGACGAGGATGTGGA+TGG | 0.567049 | 4_2:-55652822 | None:intergenic |
| ATCGGTGCTTACTCGTATTG+GGG | 0.576291 | 4_2:+55658060 | Msa0608490:CDS |
| ACAAGTTTGTTGTTGCTGCA+GGG | 0.578232 | 4_2:-55652337 | None:intergenic |
| TTTACATGATGTGCCCAAGA+TGG | 0.580075 | 4_2:-55661463 | None:intergenic |
| AGGTGAAGTTCTCACTTGGA+AGG | 0.581390 | 4_2:-55657469 | None:intergenic |
| ATAGCATACAACTTTGTCAT+CGG | 0.582605 | 4_2:+55658042 | Msa0608490:CDS |
| ACAAGAGAGTTTGGAAGCTG+CGG | 0.586139 | 4_2:+55652878 | Msa0608490:five_prime_UTR |
| CATCGTGGGAGTTGCACTGA+TGG | 0.591365 | 4_2:+55653560 | Msa0608490:CDS |
| TGTTTGGTTCCACAGAAGAA+GGG | 0.592863 | 4_2:-55653112 | None:intergenic |
| TATTTGCATCTCTTTCAAAG+AGG | 0.593085 | 4_2:+55654664 | Msa0608490:CDS |
| AAGGAGAAATAGAAAACGGA+TGG | 0.596892 | 4_2:-55652489 | None:intergenic |
| GCGGTCTTCTCTTCAAGCAA+CGG | 0.597251 | 4_2:-55660991 | None:intergenic |
| AGAGAGTTTGGAAGCTGCGG+GGG | 0.602322 | 4_2:+55652881 | Msa0608490:five_prime_UTR |
| TGGAGACATACATAATTCAC+AGG | 0.603452 | 4_2:-55660463 | None:intergenic |
| TATATGCAATCGGAAAGTGC+TGG | 0.605386 | 4_2:+55661141 | Msa0608490:three_prime_UTR |
| ATTGTGTTAAGCCAAGTTTG+AGG | 0.607042 | 4_2:+55660485 | Msa0608490:CDS |
| TAGGCTCGTTGGTGTTGGCG+AGG | 0.608838 | 4_2:+55655432 | Msa0608490:intron |
| ATATACTATAACCAGCTTTG+GGG | 0.609629 | 4_2:-55658083 | None:intergenic |
| GGAGGAATTACAATTGTATG+CGG | 0.612364 | 4_2:+55658296 | Msa0608490:CDS |
| CCATTGCTTGAAGAGAAGAC+AGG | 0.614400 | 4_2:+55661071 | Msa0608490:three_prime_UTR |
| GTAACAAACCTGTGAAGCTG+GGG | 0.624884 | 4_2:-55655497 | None:intergenic |
| ACCTGGACAACTCCAACAAG+AGG | 0.626399 | 4_2:-55660568 | None:intergenic |
| CAACTCCAATAAGTCTAAAG+GGG | 0.627956 | 4_2:-55655208 | None:intergenic |
| CGAGGAGCAATAGCTAGCAA+TGG | 0.629263 | 4_2:+55653527 | Msa0608490:CDS |
| ATAGTACCTTGAACTCCCAA+AGG | 0.635654 | 4_2:-55656660 | None:intergenic |
| TCAAACTTGGCTTAACACAA+TGG | 0.635878 | 4_2:-55660483 | None:intergenic |
| GCAGAACCTCAATCCCAAGA+AGG | 0.639701 | 4_2:+55661012 | Msa0608490:CDS |
| ATATTGGGCACTTTAGCAGG+AGG | 0.639746 | 4_2:+55658320 | Msa0608490:CDS |
| TAGTCATGTAATCAAGAACA+AGG | 0.644078 | 4_2:-55658343 | None:intergenic |
| ACTGTTGCAACCTTATGCTG+TGG | 0.644221 | 4_2:+55655245 | Msa0608490:CDS |
| GGGGCGTTATCATCAATGAA+AGG | 0.644741 | 4_2:-55655478 | None:intergenic |
| ATCAGAAATGGACAATTGGG+TGG | 0.646003 | 4_2:-55652035 | None:intergenic |
| TGGTTATAGTATATATAACA+TGG | 0.649082 | 4_2:+55658092 | Msa0608490:CDS |
| AGGAATCATGGTGGACTTGG+GGG | 0.651174 | 4_2:-55653138 | None:intergenic |
| GACAACTCCAACAAGAGGCG+CGG | 0.651802 | 4_2:-55660563 | None:intergenic |
| ATGGACAATTGGGTGGCTGG+CGG | 0.652546 | 4_2:-55652028 | None:intergenic |
| AATGGTGTTAATGGACATCG+TGG | 0.666287 | 4_2:+55653545 | Msa0608490:CDS |
| AAGAGAGTTTGGAAGCTGCG+GGG | 0.675794 | 4_2:+55652880 | Msa0608490:five_prime_UTR |
| TGGCTATGTATATGGTGGAG+TGG | 0.682859 | 4_2:+55656121 | Msa0608490:CDS |
| ATGTTGAACTATTTGGACCG+AGG | 0.689226 | 4_2:+55653509 | Msa0608490:CDS |
| GCAATTGGCTATGTATATGG+TGG | 0.689730 | 4_2:+55656116 | Msa0608490:CDS |
| TCATTGACAACATTAGTCGG+TGG | 0.705421 | 4_2:+55658649 | Msa0608490:CDS |
| AGAAGTTGCAGGAATCATGG+TGG | 0.707926 | 4_2:-55653147 | None:intergenic |
| ATGGTGTTAATGGACATCGT+GGG | 0.725953 | 4_2:+55653546 | Msa0608490:CDS |
| AGAGAAGGGAAGTACCTGAG+TGG | 0.741711 | 4_2:-55658755 | None:intergenic |
| AATGTACGAAACAAACTACG+TGG | 0.765297 | 4_2:-55661300 | None:intergenic |
| TTGGTGTCGTCAAAGTGACG+AGG | 0.769150 | 4_2:-55652832 | None:intergenic |
| CTATGTATCAGAAAACAGTG+TGG | 0.772625 | 4_2:+55656057 | Msa0608490:CDS |
| TATTGTTGTTAGAATCAACG+CGG | 0.775609 | 4_2:-55660715 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAAAA+AGG | - | chr4_2:55652510-55652529 | None:intergenic | 0.0% |
| !! | AATATAATATTATATATTAT+TGG | + | chr4_2:55653026-55653045 | Msa0608490:five_prime_UTR | 0.0% |
| !!! | TGTCAAAATAAATTTTTTTA+AGG | + | chr4_2:55652115-55652134 | Msa0608490:five_prime_UTR | 10.0% |
| !! | AATATTATATATTATTGGAA+TGG | + | chr4_2:55653031-55653050 | Msa0608490:exon | 10.0% |
| !!! | AAAATTTGATTTTTTTGATT+TGG | + | chr4_2:55653256-55653275 | Msa0608490:intron | 10.0% |
| !!! | AAATTTGATTTTTTTGATTT+GGG | + | chr4_2:55653257-55653276 | Msa0608490:intron | 10.0% |
| !!! | TAGATAATTTTATAAAAAGT+CGG | - | chr4_2:55655061-55655080 | None:intergenic | 10.0% |
| !!! | TTGGAATATTTTATATTATA+TGG | + | chr4_2:55655984-55656003 | Msa0608490:CDS | 10.0% |
| !!! | TTTTAAATTATATTTCAAGT+GGG | - | chr4_2:55656725-55656744 | None:intergenic | 10.0% |
| !!! | ATTTTAAATTATATTTCAAG+TGG | - | chr4_2:55656726-55656745 | None:intergenic | 10.0% |
| !! | AATTAAATAAATATGAAGAA+AGG | - | chr4_2:55657859-55657878 | None:intergenic | 10.0% |
| !! | ATTGAATATTTAAATAAGTT+AGG | + | chr4_2:55658477-55658496 | Msa0608490:intron | 10.0% |
| !!! | TTAATCAAGATTTTTTTTAA+AGG | + | chr4_2:55659654-55659673 | Msa0608490:intron | 10.0% |
| !! | TCATAAAGAATTATTTATTT+AGG | + | chr4_2:55659677-55659696 | Msa0608490:intron | 10.0% |
| !! | ATTGTTTAGTAATATATATA+AGG | + | chr4_2:55659807-55659826 | Msa0608490:intron | 10.0% |
| !! | AAAAAATATTATAGATAAAG+AGG | - | chr4_2:55659987-55660006 | None:intergenic | 10.0% |
| !! | AATGAAAAGAAATAATAGAA+TGG | - | chr4_2:55651966-55651985 | None:intergenic | 15.0% |
| !!! | ATGAAGTTTTTTTTTTTCTT+TGG | - | chr4_2:55652187-55652206 | None:intergenic | 15.0% |
| !!! | TTCTACTGAAAAATATTTTT+TGG | + | chr4_2:55652456-55652475 | Msa0608490:five_prime_UTR | 15.0% |
| !! | ATTAATTAAATAGAAAATGG+AGG | - | chr4_2:55652970-55652989 | None:intergenic | 15.0% |
| !!! | CAATGTTTTTTTATTCAAAA+CGG | - | chr4_2:55653226-55653245 | None:intergenic | 15.0% |
| !! | TGAATAAAAAAACATTGAAA+AGG | + | chr4_2:55653229-55653248 | Msa0608490:intron | 15.0% |
| !!! | TTTCCCTAATTTTATTTTAT+TGG | + | chr4_2:55653321-55653340 | Msa0608490:intron | 15.0% |
| !! | CAACCAATAAAATAAAATTA+GGG | - | chr4_2:55653327-55653346 | None:intergenic | 15.0% |
| !! | ACAACCAATAAAATAAAATT+AGG | - | chr4_2:55653328-55653347 | None:intergenic | 15.0% |
| !!! | TAATTTTATTTTATTGGTTG+TGG | + | chr4_2:55653327-55653346 | Msa0608490:intron | 15.0% |
| !!! | AATTTTATTTTATTGGTTGT+GGG | + | chr4_2:55653328-55653347 | Msa0608490:intron | 15.0% |
| !!! | TATTTTTTATTATGTTGTGT+AGG | + | chr4_2:55653459-55653478 | Msa0608490:intron | 15.0% |
| !!! | TAGTTAAGTTACTAATTTTA+AGG | + | chr4_2:55653769-55653788 | Msa0608490:intron | 15.0% |
| !!! | AGATAATTTTATAAAAAGTC+GGG | - | chr4_2:55655060-55655079 | None:intergenic | 15.0% |
| !! | TATAATATAGATCACATAAA+TGG | - | chr4_2:55655146-55655165 | None:intergenic | 15.0% |
| !!! | AGATTATTTTTCAAGTTTTA+TGG | + | chr4_2:55655321-55655340 | Msa0608490:intron | 15.0% |
| !! | GAAAAAATAAGAATATCAAA+TGG | - | chr4_2:55655389-55655408 | None:intergenic | 15.0% |
| !! | AGAGAATAAGAAAAAAATAA+GGG | - | chr4_2:55655411-55655430 | None:intergenic | 15.0% |
| !!! | TTTAAATTATATTTCAAGTG+GGG | - | chr4_2:55656724-55656743 | None:intergenic | 15.0% |
| !!! | ATTGTTGATAGAAAATTATT+TGG | - | chr4_2:55657077-55657096 | None:intergenic | 15.0% |
| !!! | ATAATTTTCTATCAACAATT+AGG | + | chr4_2:55657078-55657097 | Msa0608490:intron | 15.0% |
| !!! | AAATAACATAATTTTTCTCT+AGG | + | chr4_2:55657282-55657301 | Msa0608490:intron | 15.0% |
| !!! | ATGTTAGGTTTTTATTTTAT+TGG | + | chr4_2:55657345-55657364 | Msa0608490:intron | 15.0% |
| !! | GTAAAAAATAGTTCATATAT+AGG | - | chr4_2:55657960-55657979 | None:intergenic | 15.0% |
| !! | TTGAATATGAAATTATACTT+AGG | + | chr4_2:55659134-55659153 | Msa0608490:intron | 15.0% |
| !!! | ATTTTAATTGATTTTTCAGA+CGG | + | chr4_2:55659384-55659403 | Msa0608490:intron | 15.0% |
| !! | ATACTATGATGTAAATTTAA+AGG | + | chr4_2:55659615-55659634 | Msa0608490:intron | 15.0% |
| !! | ATTCAAAAAAAAATCATAAG+TGG | + | chr4_2:55659889-55659908 | Msa0608490:intron | 15.0% |
| !! | TTCAAAAAAAAATCATAAGT+GGG | + | chr4_2:55659890-55659909 | Msa0608490:intron | 15.0% |
| !! | TTACTTAAAATCATAATGTA+TGG | + | chr4_2:55659941-55659960 | Msa0608490:intron | 15.0% |
| !!! | AAGAAACAATCATTTTTTTA+GGG | - | chr4_2:55660030-55660049 | None:intergenic | 15.0% |
| !!! | AAAGAAACAATCATTTTTTT+AGG | - | chr4_2:55660031-55660050 | None:intergenic | 15.0% |
| !! | AATTTAAAAAATTACGAATG+AGG | + | chr4_2:55660295-55660314 | Msa0608490:intron | 15.0% |
| !!! | CTGAATTTTATTTGCATAAA+AGG | - | chr4_2:55652063-55652082 | None:intergenic | 20.0% |
| !!! | TTATTTTGACAGAAATATAG+AGG | - | chr4_2:55652106-55652125 | None:intergenic | 20.0% |
| !!! | AAGTTTTTTTTTTTCTTTGG+TGG | - | chr4_2:55652184-55652203 | None:intergenic | 20.0% |
| !! | TAGATTTGATACTAAACTTA+TGG | - | chr4_2:55652238-55652257 | None:intergenic | 20.0% |
| !! | AAAAAAGGAGAAATAGAAAA+CGG | - | chr4_2:55652496-55652515 | None:intergenic | 20.0% |
| !! | TAAGATATGAACAAAAATGA+AGG | + | chr4_2:55652533-55652552 | Msa0608490:intron | 20.0% |
| !! | ATTTAAATTCGCATATGATT+GGG | - | chr4_2:55652576-55652595 | None:intergenic | 20.0% |
| !! | TATTTAAATTCGCATATGAT+TGG | - | chr4_2:55652577-55652596 | None:intergenic | 20.0% |
| !! | TAAGATATGAACAAAAATGA+AGG | + | chr4_2:55652533-55652552 | Msa0608490:intron | 20.0% |
| !! | ATTTAAATTCGCATATGATT+GGG | - | chr4_2:55652576-55652595 | None:intergenic | 20.0% |
| !! | TATTTAAATTCGCATATGAT+TGG | - | chr4_2:55652577-55652596 | None:intergenic | 20.0% |
| !!! | TTTGATTTGGGTATTTATTT+TGG | + | chr4_2:55653269-55653288 | Msa0608490:intron | 20.0% |
| !!! | ATTTTATTTTATTGGTTGTG+GGG | + | chr4_2:55653329-55653348 | Msa0608490:intron | 20.0% |
| !! | TTGAATTCTTGAATAAGTTT+AGG | + | chr4_2:55653657-55653676 | Msa0608490:intron | 20.0% |
| !!! | TTACTAATTTTAAGGAAGAA+GGG | + | chr4_2:55653777-55653796 | Msa0608490:intron | 20.0% |
| !! | TTCAATCATAAACCATATAT+TGG | - | chr4_2:55653984-55654003 | None:intergenic | 20.0% |
| !! | TTCAATCATAAACCATATAT+TGG | - | chr4_2:55653984-55654003 | None:intergenic | 20.0% |
| !! | TAGATAGATAGTTCAATTTA+TGG | + | chr4_2:55654354-55654373 | Msa0608490:intron | 20.0% |
| !!! | TTTATTTAAGGTATCATTGT+GGG | - | chr4_2:55654726-55654745 | None:intergenic | 20.0% |
| !!! | ATTTATTTAAGGTATCATTG+TGG | - | chr4_2:55654727-55654746 | None:intergenic | 20.0% |
| !!! | ATGTTCAAGGTATTTATTTA+AGG | - | chr4_2:55654738-55654757 | None:intergenic | 20.0% |
| !! | TATCATTGATATGAGTATTA+AGG | + | chr4_2:55654959-55654978 | Msa0608490:intron | 20.0% |
| !! | ATCATTGATATGAGTATTAA+GGG | + | chr4_2:55654960-55654979 | Msa0608490:intron | 20.0% |
| !! | GAGAGAATAAGAAAAAAATA+AGG | - | chr4_2:55655412-55655431 | None:intergenic | 20.0% |
| !!! | ATTTTTTTCTTATTCTCTCT+AGG | + | chr4_2:55655413-55655432 | Msa0608490:intron | 20.0% |
| !! | CTTAGTTTAACTAAAATATG+AGG | - | chr4_2:55655594-55655613 | None:intergenic | 20.0% |
| !! | TTAATTATGATACCTTCATT+GGG | + | chr4_2:55655670-55655689 | Msa0608490:intron | 20.0% |
| !!! | TTTTATAACTCAAATCACTA+CGG | + | chr4_2:55655854-55655873 | Msa0608490:intron | 20.0% |
| !! | GAAAGATAAAAAAGCAAAAT+AGG | + | chr4_2:55656191-55656210 | Msa0608490:intron | 20.0% |
| !! | AGATAAGAAATATCTTAAAC+AGG | + | chr4_2:55656273-55656292 | Msa0608490:intron | 20.0% |
| !! | GATAAGAAATATCTTAAACA+GGG | + | chr4_2:55656274-55656293 | Msa0608490:intron | 20.0% |
| !! | ATAAGAAATATCTTAAACAG+GGG | + | chr4_2:55656275-55656294 | Msa0608490:intron | 20.0% |
| !! | CAAGTAAAAAAATATGACAA+GGG | - | chr4_2:55656363-55656382 | None:intergenic | 20.0% |
| !! | ACAAGTAAAAAAATATGACA+AGG | - | chr4_2:55656364-55656383 | None:intergenic | 20.0% |
| !!! | TTGCATTGATTTATTTATTG+TGG | + | chr4_2:55656547-55656566 | Msa0608490:intron | 20.0% |
| !!! | TATTATGTTTTAGACTAGTT+TGG | + | chr4_2:55656680-55656699 | Msa0608490:intron | 20.0% |
| !!! | TTAAATTATATTTCAAGTGG+GGG | - | chr4_2:55656723-55656742 | None:intergenic | 20.0% |
| !! | AATCTTTCTATATCTGAAAA+AGG | + | chr4_2:55656997-55657016 | Msa0608490:intron | 20.0% |
| !! | ATCTTTCTATATCTGAAAAA+GGG | + | chr4_2:55656998-55657017 | Msa0608490:intron | 20.0% |
| !! | AAATAAAAACCTAACATTTC+CGG | - | chr4_2:55657342-55657361 | None:intergenic | 20.0% |
| !! | AATATTTCTCAGCTATTATA+AGG | + | chr4_2:55657578-55657597 | Msa0608490:intron | 20.0% |
| !!! | AAAGTTTTTAAAAGGATTGA+GGG | - | chr4_2:55657634-55657653 | None:intergenic | 20.0% |
| !!! | AAAAGTTTTTAAAAGGATTG+AGG | - | chr4_2:55657635-55657654 | None:intergenic | 20.0% |
| !!! | TAGCAACAAAAGTTTTTAAA+AGG | - | chr4_2:55657642-55657661 | None:intergenic | 20.0% |
| !!! | ATTTTTTGTGACTCTTATAT+AGG | + | chr4_2:55657723-55657742 | Msa0608490:intron | 20.0% |
| !! | TGGTTATAGTATATATAACA+TGG | + | chr4_2:55658092-55658111 | Msa0608490:CDS | 20.0% |
| !! | ATCAAATAAAGAACTGAATT+AGG | - | chr4_2:55658451-55658470 | None:intergenic | 20.0% |
| !! | ATTTAAATAAGTTAGGTAAC+TGG | + | chr4_2:55658484-55658503 | Msa0608490:intron | 20.0% |
| !!! | ACATCTTTTAATATTACTCT+TGG | - | chr4_2:55659099-55659118 | None:intergenic | 20.0% |
| !! | GAGTAATATTAAAAGATGTT+AGG | + | chr4_2:55659100-55659119 | Msa0608490:intron | 20.0% |
| !! | TAGAAAAGTCATAAATAAGT+CGG | - | chr4_2:55659171-55659190 | None:intergenic | 20.0% |
| !! | AAAAACTACTACTCATAATT+TGG | + | chr4_2:55659538-55659557 | Msa0608490:intron | 20.0% |
| !! | ATAGTTATTAGATCTTAACA+AGG | + | chr4_2:55659859-55659878 | Msa0608490:intron | 20.0% |
| !! | TCAAAAAAAAATCATAAGTG+GGG | + | chr4_2:55659891-55659910 | Msa0608490:intron | 20.0% |
| !!! | AGAAACAATCATTTTTTTAG+GGG | - | chr4_2:55660029-55660048 | None:intergenic | 20.0% |
| !! | TACGAATAAAAATAAGTGTT+TGG | - | chr4_2:55660416-55660435 | None:intergenic | 20.0% |
| !!! | TTCTTACTATTTTTTCTTTC+AGG | + | chr4_2:55660438-55660457 | Msa0608490:intron | 20.0% |
| !!! | TCTTACTATTTTTTCTTTCA+GGG | + | chr4_2:55660439-55660458 | Msa0608490:intron | 20.0% |
| !! | AATCTTATTACACATTATTG+TGG | + | chr4_2:55660625-55660644 | Msa0608490:intron | 20.0% |
| !! | TATATGTTTGTATATGCAAT+CGG | + | chr4_2:55661131-55661150 | Msa0608490:three_prime_UTR | 20.0% |
| !! | AAAAAGGTTAATAGTATGTT+TGG | - | chr4_2:55661259-55661278 | None:intergenic | 20.0% |
| !! | CATCAAAAGATATTACAAAA+AGG | - | chr4_2:55661275-55661294 | None:intergenic | 20.0% |
| !!! | CTTTTTGTAATATCTTTTGA+TGG | + | chr4_2:55661273-55661292 | Msa0608490:three_prime_UTR | 20.0% |
| !! | TAAGGAGTTACTTTGAAAAA+TGG | + | chr4_2:55652133-55652152 | Msa0608490:five_prime_UTR | 25.0% |
| !! | AAGGAGTTACTTTGAAAAAT+GGG | + | chr4_2:55652134-55652153 | Msa0608490:five_prime_UTR | 25.0% |
| ! | TTGATACTAAACTTATGGTA+TGG | - | chr4_2:55652233-55652252 | None:intergenic | 25.0% |
| !! | ACAAACTTGTGATTAGATTT+TGG | + | chr4_2:55652350-55652369 | Msa0608490:five_prime_UTR | 25.0% |
| !!! | ATTTGGGTATTTATTTTGGA+GGG | + | chr4_2:55653273-55653292 | Msa0608490:intron | 25.0% |
| !!! | TTTTGAATGTTGTTGATGAT+TGG | + | chr4_2:55653355-55653374 | Msa0608490:intron | 25.0% |
| ! | TAATGCAGGTTAAAATTAAC+TGG | + | chr4_2:55653386-55653405 | Msa0608490:intron | 25.0% |
| ! | GATTAACATGTTGAACTATT+TGG | + | chr4_2:55653502-55653521 | Msa0608490:CDS | 25.0% |
| !!! | GTTACTAATTTTAAGGAAGA+AGG | + | chr4_2:55653776-55653795 | Msa0608490:intron | 25.0% |
| ! | TATATTACAGTACACTATCA+TGG | - | chr4_2:55654495-55654514 | None:intergenic | 25.0% |
| !!! | AACTTGAACAATTTTCAAGA+TGG | + | chr4_2:55654594-55654613 | Msa0608490:CDS | 25.0% |
| ! | TTTGAAAGAGATGCAAATAT+TGG | - | chr4_2:55654663-55654682 | None:intergenic | 25.0% |
| !! | TTATTTGACTTCTTAATGCT+AGG | + | chr4_2:55654819-55654838 | Msa0608490:intron | 25.0% |
| !! | ATCATTTTGTGGGATTAATT+TGG | + | chr4_2:55655619-55655638 | Msa0608490:intron | 25.0% |
| !! | TCATTTTGTGGGATTAATTT+GGG | + | chr4_2:55655620-55655639 | Msa0608490:intron | 25.0% |
| ! | GTTAATTATGATACCTTCAT+TGG | + | chr4_2:55655669-55655688 | Msa0608490:intron | 25.0% |
| !! | GTGATTTGAGTTATAAAACT+CGG | - | chr4_2:55655852-55655871 | None:intergenic | 25.0% |
| !! | AATGGTTTGTAGATATAATC+TGG | + | chr4_2:55655926-55655945 | Msa0608490:intron | 25.0% |
| ! | GTTAGAACCATAAAGAAAAT+AGG | - | chr4_2:55656024-55656043 | None:intergenic | 25.0% |
| !! | ATATTTTACATGTGTATACC+AGG | + | chr4_2:55656086-55656105 | Msa0608490:CDS | 25.0% |
| ! | TTACTACTGGAATAAAACAA+TGG | - | chr4_2:55656170-55656189 | None:intergenic | 25.0% |
| !!! | ATTGTTTTATTCCAGTAGTA+AGG | + | chr4_2:55656169-55656188 | Msa0608490:intron | 25.0% |
| !! | TTTTTATCTTTCCTTACTAC+TGG | - | chr4_2:55656183-55656202 | None:intergenic | 25.0% |
| ! | TTGAAAGAGAAATATTACAC+TGG | - | chr4_2:55656220-55656239 | None:intergenic | 25.0% |
| ! | AACATGAAATGAGTTAGTAA+AGG | - | chr4_2:55656845-55656864 | None:intergenic | 25.0% |
| ! | TTTACTAACTCATTTCATGT+TGG | + | chr4_2:55656844-55656863 | Msa0608490:intron | 25.0% |
| ! | ATGTTATAGAAAAGAAGGAT+CGG | - | chr4_2:55656960-55656979 | None:intergenic | 25.0% |
| ! | GAGATATGTTATAGAAAAGA+AGG | - | chr4_2:55656965-55656984 | None:intergenic | 25.0% |
| ! | TAGAAAGATTACAACAATTC+TGG | - | chr4_2:55656987-55657006 | None:intergenic | 25.0% |
| ! | TCTTTCTATATCTGAAAAAG+GGG | + | chr4_2:55656999-55657018 | Msa0608490:intron | 25.0% |
| ! | TTTGAAAAAGGACAAAAGAA+AGG | - | chr4_2:55657126-55657145 | None:intergenic | 25.0% |
| ! | ACTAACCAAAATTACTTCTT+TGG | + | chr4_2:55657193-55657212 | Msa0608490:intron | 25.0% |
| ! | CGTAGACAATATTAAATCTT+AGG | - | chr4_2:55657220-55657239 | None:intergenic | 25.0% |
| ! | TACATAGTGGTTTCTATATT+TGG | + | chr4_2:55657504-55657523 | Msa0608490:intron | 25.0% |
| !! | AATATTCTGTTTGCATGTTT+TGG | - | chr4_2:55657749-55657768 | None:intergenic | 25.0% |
| !! | AGATATGAAAGAACTTTTGT+CGG | + | chr4_2:55657793-55657812 | Msa0608490:CDS | 25.0% |
| ! | AATAGTTCATATATAGGTAG+AGG | - | chr4_2:55657954-55657973 | None:intergenic | 25.0% |
| ! | ATGCTATATAACCTGAAAAT+AGG | - | chr4_2:55658029-55658048 | None:intergenic | 25.0% |
| ! | TATATACTATAACCAGCTTT+GGG | - | chr4_2:55658087-55658106 | None:intergenic | 25.0% |
| ! | ATATATACTATAACCAGCTT+TGG | - | chr4_2:55658088-55658107 | None:intergenic | 25.0% |
| !! | TAAAATTTTATCCACACTCT+TGG | - | chr4_2:55658140-55658159 | None:intergenic | 25.0% |
| ! | AAACAAGTAACAATGAAAGA+AGG | - | chr4_2:55658164-55658183 | None:intergenic | 25.0% |
| ! | TTTACCAGAAAATTAGGTAT+CGG | - | chr4_2:55658202-55658221 | None:intergenic | 25.0% |
| ! | ATTGTGTTTACCAGAAAATT+AGG | - | chr4_2:55658208-55658227 | None:intergenic | 25.0% |
| ! | ACTAATGCAGATATGATATT+TGG | + | chr4_2:55658275-55658294 | Msa0608490:CDS | 25.0% |
| ! | AACCTTAAATGCATTTGATA+GGG | - | chr4_2:55658372-55658391 | None:intergenic | 25.0% |
| ! | TATACATGCTTCTCATTTAT+TGG | + | chr4_2:55658834-55658853 | Msa0608490:intron | 25.0% |
| ! | ATGTAAATCACCTATATAAC+TGG | + | chr4_2:55658960-55658979 | Msa0608490:intron | 25.0% |
| ! | TGTAAATCACCTATATAACT+GGG | + | chr4_2:55658961-55658980 | Msa0608490:intron | 25.0% |
| ! | AATTACATTATACTCAGAAG+TGG | - | chr4_2:55659055-55659074 | None:intergenic | 25.0% |
| ! | AGAAAAGTCATAAATAAGTC+GGG | - | chr4_2:55659170-55659189 | None:intergenic | 25.0% |
| ! | TACACAATAAAAGTAGAAGT+TGG | + | chr4_2:55659189-55659208 | Msa0608490:intron | 25.0% |
| ! | ACACAATAAAAGTAGAAGTT+GGG | + | chr4_2:55659190-55659209 | Msa0608490:intron | 25.0% |
| !! | AACTAACTTCTAAAAGTTCT+CGG | + | chr4_2:55659307-55659326 | Msa0608490:intron | 25.0% |
| ! | AAAAATAAAACGTGCTCAAT+AGG | - | chr4_2:55659363-55659382 | None:intergenic | 25.0% |
| ! | AATCTGTTGATGTTAAAAGA+TGG | + | chr4_2:55659479-55659498 | Msa0608490:intron | 25.0% |
| ! | GAAATGAAGTTAAAGTTGTT+TGG | - | chr4_2:55660183-55660202 | None:intergenic | 25.0% |
| ! | CTTCTATAGTACATAGATAA+GGG | - | chr4_2:55660273-55660292 | None:intergenic | 25.0% |
| ! | ACTTCTATAGTACATAGATA+AGG | - | chr4_2:55660274-55660293 | None:intergenic | 25.0% |
| ! | ACTGTAGCTATTCATATATT+CGG | + | chr4_2:55660529-55660548 | Msa0608490:CDS | 25.0% |
| ! | TACAGTACAATATATTCTGA+TGG | + | chr4_2:55660650-55660669 | Msa0608490:intron | 25.0% |
| ! | TGCTTGAAGATATTACAAAA+AGG | - | chr4_2:55661042-55661061 | None:intergenic | 25.0% |
| GTTATCAGAAATGGACAATT+GGG | - | chr4_2:55652041-55652060 | None:intergenic | 30.0% | |
| GCATAAAAGGTTATCAGAAA+TGG | - | chr4_2:55652050-55652069 | None:intergenic | 30.0% | |
| CAAATCTACAACATTGATCA+TGG | + | chr4_2:55652250-55652269 | Msa0608490:five_prime_UTR | 30.0% | |
| TCCATACATTACCCAAATAA+AGG | + | chr4_2:55652614-55652633 | Msa0608490:intron | 30.0% | |
| ! | TCCTTTATTTGGGTAATGTA+TGG | - | chr4_2:55652618-55652637 | None:intergenic | 30.0% |
| !! | GGATGGATTATCCTTTATTT+GGG | - | chr4_2:55652628-55652647 | None:intergenic | 30.0% |
| !! | TGGATGGATTATCCTTTATT+TGG | - | chr4_2:55652629-55652648 | None:intergenic | 30.0% |
| TCCATACATTACCCAAATAA+AGG | + | chr4_2:55652614-55652633 | Msa0608490:intron | 30.0% | |
| ! | TCCTTTATTTGGGTAATGTA+TGG | - | chr4_2:55652618-55652637 | None:intergenic | 30.0% |
| !! | GGATGGATTATCCTTTATTT+GGG | - | chr4_2:55652628-55652647 | None:intergenic | 30.0% |
| !! | TGGATGGATTATCCTTTATT+TGG | - | chr4_2:55652629-55652648 | None:intergenic | 30.0% |
| AAATAGAAAATGGAGGTTGA+AGG | - | chr4_2:55652963-55652982 | None:intergenic | 30.0% | |
| ! | AAAAGGGTGAATTACCTTTT+TGG | - | chr4_2:55653182-55653201 | None:intergenic | 30.0% |
| ACGGATCTATCAACAAAAAA+GGG | - | chr4_2:55653207-55653226 | None:intergenic | 30.0% | |
| AACGGATCTATCAACAAAAA+AGG | - | chr4_2:55653208-55653227 | None:intergenic | 30.0% | |
| !!! | GATTTGGGTATTTATTTTGG+AGG | + | chr4_2:55653272-55653291 | Msa0608490:intron | 30.0% |
| !! | TTTTGGAGGGTTTATAATTC+TGG | + | chr4_2:55653286-55653305 | Msa0608490:intron | 30.0% |
| TTTGGAGGGTTTATAATTCT+GGG | + | chr4_2:55653287-55653306 | Msa0608490:intron | 30.0% | |
| AGAGAGAAAACCTATAGATT+CGG | + | chr4_2:55653846-55653865 | Msa0608490:intron | 30.0% | |
| AAGGAGAGTAAATCAAATGA+AGG | + | chr4_2:55653873-55653892 | Msa0608490:intron | 30.0% | |
| ! | TAGTGAGTTGAACCAATATA+TGG | + | chr4_2:55653969-55653988 | Msa0608490:intron | 30.0% |
| AGAGAGAAAACCTATAGATT+CGG | + | chr4_2:55653846-55653865 | Msa0608490:intron | 30.0% | |
| AAGGAGAGTAAATCAAATGA+AGG | + | chr4_2:55653873-55653892 | Msa0608490:intron | 30.0% | |
| ATGTCCTAGAAAAACTACAA+GGG | + | chr4_2:55654191-55654210 | Msa0608490:intron | 30.0% | |
| AAACTACAAGGGAAACTATT+AGG | + | chr4_2:55654202-55654221 | Msa0608490:intron | 30.0% | |
| AACTATTAGGAAATACTTGC+AGG | + | chr4_2:55654215-55654234 | Msa0608490:intron | 30.0% | |
| ! | TAGTGAGTTGAACCAATATA+TGG | + | chr4_2:55653969-55653988 | Msa0608490:intron | 30.0% |
| ! | TAAGCTTTATCCAACTAAGT+GGG | - | chr4_2:55654309-55654328 | None:intergenic | 30.0% |
| ! | TTAAGCTTTATCCAACTAAG+TGG | - | chr4_2:55654310-55654329 | None:intergenic | 30.0% |
| !! | ATTGTTTTGTACTTCTGTGT+AGG | + | chr4_2:55654562-55654581 | Msa0608490:intron | 30.0% |
| !! | TTGTTTTGTACTTCTGTGTA+GGG | + | chr4_2:55654563-55654582 | Msa0608490:intron | 30.0% |
| TATTTGCATCTCTTTCAAAG+AGG | + | chr4_2:55654664-55654683 | Msa0608490:CDS | 30.0% | |
| TGATTTGATTCACATGTTCA+AGG | - | chr4_2:55654751-55654770 | None:intergenic | 30.0% | |
| TCAAATCAATGACTACTATG+TGG | + | chr4_2:55654763-55654782 | Msa0608490:intron | 30.0% | |
| ! | AGCATGCTTTAAACAACAAT+CGG | + | chr4_2:55654883-55654902 | Msa0608490:intron | 30.0% |
| TTTGTGAATCAAGGACATAT+TGG | - | chr4_2:55654925-55654944 | None:intergenic | 30.0% | |
| !! | ATTGCTTTGTTTGTGAATCA+AGG | - | chr4_2:55654934-55654953 | None:intergenic | 30.0% |
| ATTGATATGAGTATTAAGGG+TGG | + | chr4_2:55654963-55654982 | Msa0608490:intron | 30.0% | |
| TTACATGCGACATAATGTAA+TGG | - | chr4_2:55655291-55655310 | None:intergenic | 30.0% | |
| ! | AAAGCATGAGACAGTTTTTA+GGG | - | chr4_2:55655526-55655545 | None:intergenic | 30.0% |
| ! | ACTAAGAAGCAATCATTTTG+TGG | + | chr4_2:55655608-55655627 | Msa0608490:intron | 30.0% |
| ! | CTAAGAAGCAATCATTTTGT+GGG | + | chr4_2:55655609-55655628 | Msa0608490:intron | 30.0% |
| AATTGTGAGACTATTTGCTT+TGG | + | chr4_2:55655709-55655728 | Msa0608490:intron | 30.0% | |
| ! | GCTTTGGTATAATTGCATTT+TGG | + | chr4_2:55655725-55655744 | Msa0608490:intron | 30.0% |
| AGTTATAAAACTCGGCATTT+AGG | - | chr4_2:55655844-55655863 | None:intergenic | 30.0% | |
| GCTTCTATTCAACATTTCAA+TGG | + | chr4_2:55655908-55655927 | Msa0608490:intron | 30.0% | |
| AAATATTCCAACTGTCAAGA+AGG | - | chr4_2:55655975-55655994 | None:intergenic | 30.0% | |
| ! | TTTGCTGCCTATTTTCTTTA+TGG | + | chr4_2:55656014-55656033 | Msa0608490:CDS | 30.0% |
| TATGCAATTGGCTATGTATA+TGG | + | chr4_2:55656113-55656132 | Msa0608490:CDS | 30.0% | |
| ACCTTGTCACAATAAACTTA+TGG | + | chr4_2:55656324-55656343 | Msa0608490:intron | 30.0% | |
| TCCATAAGTTTATTGTGACA+AGG | - | chr4_2:55656328-55656347 | None:intergenic | 30.0% | |
| CAATGAAAGGATAAAATCAG+AGG | - | chr4_2:55656398-55656417 | None:intergenic | 30.0% | |
| TCCTTTCATTGTTCATAAAC+AGG | + | chr4_2:55656407-55656426 | Msa0608490:intron | 30.0% | |
| ACCTGTTTATGAACAATGAA+AGG | - | chr4_2:55656411-55656430 | None:intergenic | 30.0% | |
| TTCATTGTTCATAAACAGGT+TGG | + | chr4_2:55656411-55656430 | Msa0608490:intron | 30.0% | |
| !!! | ATGCTTCCATTTGCTATTTT+GGG | + | chr4_2:55656480-55656499 | Msa0608490:CDS | 30.0% |
| ACAAATCCCAAAATAGCAAA+TGG | - | chr4_2:55656489-55656508 | None:intergenic | 30.0% | |
| AGAGATCGAAAACAATATCA+AGG | - | chr4_2:55656575-55656594 | None:intergenic | 30.0% | |
| TTTCGATCTCTAAACTACTT+TGG | + | chr4_2:55656584-55656603 | Msa0608490:intron | 30.0% | |
| TGTGTAAATATAGATTGGTG+TGG | - | chr4_2:55656789-55656808 | None:intergenic | 30.0% | |
| CGAGTTGTGTAAATATAGAT+TGG | - | chr4_2:55656794-55656813 | None:intergenic | 30.0% | |
| AATAAACTCAACAAGCACAA+AGG | - | chr4_2:55656886-55656905 | None:intergenic | 30.0% | |
| TAAAAAAAGCAATACAGCAC+AGG | - | chr4_2:55656928-55656947 | None:intergenic | 30.0% | |
| CTTTCTATATCTGAAAAAGG+GGG | + | chr4_2:55657000-55657019 | Msa0608490:intron | 30.0% | |
| AAAAGGACAAAAGAAAGGAA+CGG | - | chr4_2:55657121-55657140 | None:intergenic | 30.0% | |
| ! | TAGGACCAAAGAAGTAATTT+TGG | - | chr4_2:55657201-55657220 | None:intergenic | 30.0% |
| ! | TTATTTTCCCAGACATGAAA+GGG | - | chr4_2:55657268-55657287 | None:intergenic | 30.0% |
| TTTCAATTACCGGAAATGTT+AGG | + | chr4_2:55657330-55657349 | Msa0608490:intron | 30.0% | |
| GAATCACAATATCTCTTCAT+TGG | + | chr4_2:55657377-55657396 | Msa0608490:intron | 30.0% | |
| !!! | TATCTTTTTTGATGCACAGA+TGG | + | chr4_2:55657412-55657431 | Msa0608490:intron | 30.0% |
| !!! | ATCTTTTTTGATGCACAGAT+GGG | + | chr4_2:55657413-55657432 | Msa0608490:intron | 30.0% |
| ACTATGTAAATCAAGGATGA+AGG | - | chr4_2:55657492-55657511 | None:intergenic | 30.0% | |
| TTCATCCTTGATTTACATAG+TGG | + | chr4_2:55657491-55657510 | Msa0608490:intron | 30.0% | |
| AGAAACCACTATGTAAATCA+AGG | - | chr4_2:55657499-55657518 | None:intergenic | 30.0% | |
| AATAGCTGAGAAATATTGAC+AGG | - | chr4_2:55657575-55657594 | None:intergenic | 30.0% | |
| ! | GTTACTGAATTCCTATTTTC+AGG | + | chr4_2:55658015-55658034 | Msa0608490:intron | 30.0% |
| ATAGCATACAACTTTGTCAT+CGG | + | chr4_2:55658042-55658061 | Msa0608490:CDS | 30.0% | |
| ATATACTATAACCAGCTTTG+GGG | - | chr4_2:55658086-55658105 | None:intergenic | 30.0% | |
| TTACCAGAAAATTAGGTATC+GGG | - | chr4_2:55658201-55658220 | None:intergenic | 30.0% | |
| CTGGTAAACACAATGTTAAT+CGG | + | chr4_2:55658214-55658233 | Msa0608490:intron | 30.0% | |
| AATGCAGATATGATATTTGG+AGG | + | chr4_2:55658278-55658297 | Msa0608490:CDS | 30.0% | |
| TACAATTGTATGCGGAATAT+TGG | + | chr4_2:55658304-55658323 | Msa0608490:CDS | 30.0% | |
| ACAATTGTATGCGGAATATT+GGG | + | chr4_2:55658305-55658324 | Msa0608490:CDS | 30.0% | |
| TAGTCATGTAATCAAGAACA+AGG | - | chr4_2:55658346-55658365 | None:intergenic | 30.0% | |
| CAACCTTAAATGCATTTGAT+AGG | - | chr4_2:55658373-55658392 | None:intergenic | 30.0% | |
| ! | CTATCAAATGCATTTAAGGT+TGG | + | chr4_2:55658371-55658390 | Msa0608490:intron | 30.0% |
| ! | AGTTTTCTTCACATAGAGAA+GGG | - | chr4_2:55658772-55658791 | None:intergenic | 30.0% |
| ! | AAGTTTTCTTCACATAGAGA+AGG | - | chr4_2:55658773-55658792 | None:intergenic | 30.0% |
| ! | GAGAAGCATGTATATAGTTT+AGG | - | chr4_2:55658828-55658847 | None:intergenic | 30.0% |
| TTTCAAGATATTCAGCTAAC+AGG | - | chr4_2:55658885-55658904 | None:intergenic | 30.0% | |
| GATTAACTTCCCAGTTATAT+AGG | - | chr4_2:55658973-55658992 | None:intergenic | 30.0% | |
| AATTATACTTAGGTAGCGTT+TGG | + | chr4_2:55659144-55659163 | Msa0608490:intron | 30.0% | |
| TGTTTCTCAAGAAATGTGTT+TGG | - | chr4_2:55659216-55659235 | None:intergenic | 30.0% | |
| ACCATTGTCAATAAGAAGTA+CGG | - | chr4_2:55659569-55659588 | None:intergenic | 30.0% | |
| TTCTATGCCTCAAAAAAGTT+GGG | + | chr4_2:55660238-55660257 | Msa0608490:intron | 30.0% | |
| AGTACAATATATTCTGATGG+CGG | + | chr4_2:55660653-55660672 | Msa0608490:intron | 30.0% | |
| ! | TATTGTTGTTAGAATCAACG+CGG | - | chr4_2:55660718-55660737 | None:intergenic | 30.0% |
| TGTAGCATCATATAATAGCA+TGG | + | chr4_2:55660832-55660851 | Msa0608490:intron | 30.0% | |
| ACTATGCAAAAATATTCCTG+TGG | - | chr4_2:55660908-55660927 | None:intergenic | 30.0% | |
| !! | AGGAATATTTTTGCATAGTG+TGG | + | chr4_2:55660909-55660928 | Msa0608490:intron | 30.0% |
| ACAAAAAGGTTAACCTTCTT+GGG | - | chr4_2:55661028-55661047 | None:intergenic | 30.0% | |
| TACAAAAAGGTTAACCTTCT+TGG | - | chr4_2:55661029-55661048 | None:intergenic | 30.0% | |
| TCAGAAAAAACACGTCAAAA+AGG | + | chr4_2:55661198-55661217 | Msa0608490:three_prime_UTR | 30.0% | |
| ! | AAAACACGTCAAAAAGGTTT+TGG | + | chr4_2:55661204-55661223 | Msa0608490:three_prime_UTR | 30.0% |
| ! | AAACACGTCAAAAAGGTTTT+GGG | + | chr4_2:55661205-55661224 | Msa0608490:three_prime_UTR | 30.0% |
| !! | ATCTTTTTGCTTTTGCTTAG+TGG | + | chr4_2:55661385-55661404 | Msa0608490:three_prime_UTR | 30.0% |
| ATGTTTATGTTTCACCATCT+TGG | + | chr4_2:55661449-55661468 | Msa0608490:three_prime_UTR | 30.0% | |
| TGTTTATGTTTCACCATCTT+GGG | + | chr4_2:55661450-55661469 | Msa0608490:three_prime_UTR | 30.0% | |
| GAGTGATTGAAGAAGAAGAA+AGG | - | chr4_2:55651995-55652014 | None:intergenic | 35.0% | |
| GGTTATCAGAAATGGACAAT+TGG | - | chr4_2:55652042-55652061 | None:intergenic | 35.0% | |
| AAGGAGAAATAGAAAACGGA+TGG | - | chr4_2:55652492-55652511 | None:intergenic | 35.0% | |
| GTTCTTGTTGACAATGATGT+TGG | - | chr4_2:55652674-55652693 | None:intergenic | 35.0% | |
| GTTCTTGTTGACAATGATGT+TGG | - | chr4_2:55652674-55652693 | None:intergenic | 35.0% | |
| AGAACAAGAACAAGAGAGTT+TGG | + | chr4_2:55652869-55652888 | Msa0608490:five_prime_UTR | 35.0% | |
| TAAACCTTCTTCTTTCTACC+TGG | + | chr4_2:55652924-55652943 | Msa0608490:five_prime_UTR | 35.0% | |
| ! | GAAGTTGTTGTTGAAGGTTT+CGG | - | chr4_2:55653077-55653096 | None:intergenic | 35.0% |
| ! | GAAGAAGAAGTTGTTGTTGA+AGG | - | chr4_2:55653083-55653102 | None:intergenic | 35.0% |
| CTTCTTGGTTTACACCAAAA+AGG | + | chr4_2:55653165-55653184 | Msa0608490:CDS | 35.0% | |
| TCAACAAAAAAGGGGGAAAA+GGG | - | chr4_2:55653198-55653217 | None:intergenic | 35.0% | |
| ATCAACAAAAAAGGGGGAAA+AGG | - | chr4_2:55653199-55653218 | None:intergenic | 35.0% | |
| GGATCTATCAACAAAAAAGG+GGG | - | chr4_2:55653205-55653224 | None:intergenic | 35.0% | |
| CGGATCTATCAACAAAAAAG+GGG | - | chr4_2:55653206-55653225 | None:intergenic | 35.0% | |
| GATTGGTATTTGACTAATGC+AGG | + | chr4_2:55653372-55653391 | Msa0608490:intron | 35.0% | |
| ! | ATAGCTAGCAATGGTGTTAA+TGG | + | chr4_2:55653536-55653555 | Msa0608490:CDS | 35.0% |
| AATGACATGGTTGTCAAAGA+AGG | + | chr4_2:55653730-55653749 | Msa0608490:intron | 35.0% | |
| ATGACATGGTTGTCAAAGAA+GGG | + | chr4_2:55653731-55653750 | Msa0608490:intron | 35.0% | |
| ! | GGGAATTGAGATTGAGATTT+TGG | + | chr4_2:55653797-55653816 | Msa0608490:intron | 35.0% |
| ! | AACCTATAGATTCGGTAGTA+AGG | + | chr4_2:55653854-55653873 | Msa0608490:intron | 35.0% |
| ! | TTAAGCTTTATCCCACTAAG+TGG | - | chr4_2:55654040-55654059 | None:intergenic | 35.0% |
| ACTTAGTGGGATAAAGCTTA+AGG | + | chr4_2:55654039-55654058 | Msa0608490:intron | 35.0% | |
| GGATAAAGCTTAAGGAAGAA+GGG | + | chr4_2:55654047-55654066 | Msa0608490:intron | 35.0% | |
| ! | GGGAATTGAGATTGAGATTT+TGG | + | chr4_2:55653797-55653816 | Msa0608490:intron | 35.0% |
| ! | AACCTATAGATTCGGTAGTA+AGG | + | chr4_2:55653854-55653873 | Msa0608490:intron | 35.0% |
| GATGTCCTAGAAAAACTACA+AGG | + | chr4_2:55654190-55654209 | Msa0608490:intron | 35.0% | |
| ! | GTTTCCCTTGTAGTTTTTCT+AGG | - | chr4_2:55654198-55654217 | None:intergenic | 35.0% |
| ! | TGTTTTGTACTTCTGTGTAG+GGG | + | chr4_2:55654564-55654583 | Msa0608490:intron | 35.0% |
| !! | AGTTCTCTCATCTGCTTTTA+TGG | + | chr4_2:55654617-55654636 | Msa0608490:CDS | 35.0% |
| TCGGGCACAATAAAATGATA+AGG | - | chr4_2:55655042-55655061 | None:intergenic | 35.0% | |
| TAACCCAATACTGAGAACTT+TGG | + | chr4_2:55655093-55655112 | Msa0608490:intron | 35.0% | |
| GGGTTTACACTGCAAAATAT+AGG | - | chr4_2:55655191-55655210 | None:intergenic | 35.0% | |
| GTAAACCCCTTTAGACTTAT+TGG | + | chr4_2:55655203-55655222 | Msa0608490:CDS | 35.0% | |
| CAACTCCAATAAGTCTAAAG+GGG | - | chr4_2:55655211-55655230 | None:intergenic | 35.0% | |
| CCAACTCCAATAAGTCTAAA+GGG | - | chr4_2:55655212-55655231 | None:intergenic | 35.0% | |
| TCCAACTCCAATAAGTCTAA+AGG | - | chr4_2:55655213-55655232 | None:intergenic | 35.0% | |
| GTGGTCTTTCTTTCAATTTC+TGG | + | chr4_2:55655264-55655283 | Msa0608490:CDS | 35.0% | |
| !! | GAAAGCATGAGACAGTTTTT+AGG | - | chr4_2:55655527-55655546 | None:intergenic | 35.0% |
| AATATGAGCACAATAGACGA+TGG | - | chr4_2:55655567-55655586 | None:intergenic | 35.0% | |
| CGTCTATTGTGCTCATATTT+AGG | + | chr4_2:55655568-55655587 | Msa0608490:intron | 35.0% | |
| ACGTATTAATGACCCAATGA+AGG | - | chr4_2:55655685-55655704 | None:intergenic | 35.0% | |
| CTCAAATCACTACGGAAATT+TGG | + | chr4_2:55655862-55655881 | Msa0608490:intron | 35.0% | |
| TTTCTTACCTTCTTGACAGT+TGG | + | chr4_2:55655965-55655984 | Msa0608490:intron | 35.0% | |
| !! | TGGTTCTAACCTTCTTATAC+TGG | + | chr4_2:55656034-55656053 | Msa0608490:CDS | 35.0% |
| GATACATAGCCAGTATAAGA+AGG | - | chr4_2:55656046-55656065 | None:intergenic | 35.0% | |
| CTATGTATCAGAAAACAGTG+TGG | + | chr4_2:55656057-55656076 | Msa0608490:CDS | 35.0% | |
| ! | TTTTACATGTGTATACCAGG+CGG | + | chr4_2:55656089-55656108 | Msa0608490:CDS | 35.0% |
| AGAAATATCTTAAACAGGGG+AGG | + | chr4_2:55656278-55656297 | Msa0608490:intron | 35.0% | |
| !! | AAACAGGTTGGAAGTCATTT+TGG | + | chr4_2:55656423-55656442 | Msa0608490:intron | 35.0% |
| !!! | GATGCTTCCATTTGCTATTT+TGG | + | chr4_2:55656479-55656498 | Msa0608490:CDS | 35.0% |
| ATGAAGCCTTTGCAGTTAAA+AGG | + | chr4_2:55656510-55656529 | Msa0608490:CDS | 35.0% | |
| CTCTAAACTACTTTGGATAC+AGG | + | chr4_2:55656591-55656610 | Msa0608490:intron | 35.0% | |
| !!! | GCACATTTTTTGAATCAGCA+GGG | - | chr4_2:55656623-55656642 | None:intergenic | 35.0% |
| !!! | AGCACATTTTTTGAATCAGC+AGG | - | chr4_2:55656624-55656643 | None:intergenic | 35.0% |
| !! | TGCTGATTCAAAAAATGTGC+TGG | + | chr4_2:55656623-55656642 | Msa0608490:CDS | 35.0% |
| !!! | TGTTTTAGACTAGTTTGGTG+AGG | + | chr4_2:55656685-55656704 | Msa0608490:intron | 35.0% |
| TCTCAACAATCAGGGTTTAA+TGG | - | chr4_2:55657047-55657066 | None:intergenic | 35.0% | |
| GAGAACATTCTCAACAATCA+GGG | - | chr4_2:55657055-55657074 | None:intergenic | 35.0% | |
| AATATTTCCCCTTTCATGTC+TGG | + | chr4_2:55657257-55657276 | Msa0608490:intron | 35.0% | |
| ATATTTCCCCTTTCATGTCT+GGG | + | chr4_2:55657258-55657277 | Msa0608490:intron | 35.0% | |
| ! | TATTTTCCCAGACATGAAAG+GGG | - | chr4_2:55657267-55657286 | None:intergenic | 35.0% |
| !! | GTTATTTTCCCAGACATGAA+AGG | - | chr4_2:55657269-55657288 | None:intergenic | 35.0% |
| CACCTATGTCTTTCAATTAC+CGG | + | chr4_2:55657320-55657339 | Msa0608490:intron | 35.0% | |
| TTCCGGTAATTGAAAGACAT+AGG | - | chr4_2:55657325-55657344 | None:intergenic | 35.0% | |
| !!! | TCTTTTTTGATGCACAGATG+GGG | + | chr4_2:55657414-55657433 | Msa0608490:intron | 35.0% |
| TTATTGTATCTCCAAGTGTG+TGG | + | chr4_2:55657667-55657686 | Msa0608490:intron | 35.0% | |
| ! | GAAAGAACTTTTGTCGGATA+AGG | + | chr4_2:55657799-55657818 | Msa0608490:CDS | 35.0% |
| CATATATAGGTAGAGGAGAA+TGG | - | chr4_2:55657947-55657966 | None:intergenic | 35.0% | |
| GGAGGAATTACAATTGTATG+CGG | + | chr4_2:55658296-55658315 | Msa0608490:CDS | 35.0% | |
| CACCCTATCAAATGCATTTA+AGG | + | chr4_2:55658367-55658386 | Msa0608490:CDS | 35.0% | |
| TTCAAGGTAACTAGTTAGGA+TGG | - | chr4_2:55658613-55658632 | None:intergenic | 35.0% | |
| AGAGTTCAAGGTAACTAGTT+AGG | - | chr4_2:55658617-55658636 | None:intergenic | 35.0% | |
| CTCTCATTGACAACATTAGT+CGG | + | chr4_2:55658646-55658665 | Msa0608490:CDS | 35.0% | |
| ! | ATACATGCTTTTGAATGCGA+AGG | - | chr4_2:55658692-55658711 | None:intergenic | 35.0% |
| ! | TTCGCATTCAAAAGCATGTA+TGG | + | chr4_2:55658691-55658710 | Msa0608490:CDS | 35.0% |
| !! | TTCCTAGCTCTTTTTGCTAT+TGG | + | chr4_2:55658715-55658734 | Msa0608490:CDS | 35.0% |
| TCCAAACCTAATGTTGTGTT+TGG | + | chr4_2:55659006-55659025 | Msa0608490:intron | 35.0% | |
| TCCAAACACAACATTAGGTT+TGG | - | chr4_2:55659010-55659029 | None:intergenic | 35.0% | |
| AGTCATCCAAACACAACATT+AGG | - | chr4_2:55659015-55659034 | None:intergenic | 35.0% | |
| ! | CATTGTCAATAAGAAGTACG+GGG | - | chr4_2:55659567-55659586 | None:intergenic | 35.0% |
| ! | CCATTGTCAATAAGAAGTAC+GGG | - | chr4_2:55659568-55659587 | None:intergenic | 35.0% |
| CTTCTATGCCTCAAAAAAGT+TGG | + | chr4_2:55660237-55660256 | Msa0608490:intron | 35.0% | |
| TACGAATGAGGACAAAATTG+AGG | + | chr4_2:55660307-55660326 | Msa0608490:intron | 35.0% | |
| GATGATGTAGAATGTAGAGA+TGG | + | chr4_2:55660385-55660404 | Msa0608490:intron | 35.0% | |
| TGGAGACATACATAATTCAC+AGG | - | chr4_2:55660466-55660485 | None:intergenic | 35.0% | |
| TCAAACTTGGCTTAACACAA+TGG | - | chr4_2:55660486-55660505 | None:intergenic | 35.0% | |
| ATTGTGTTAAGCCAAGTTTG+AGG | + | chr4_2:55660485-55660504 | Msa0608490:CDS | 35.0% | |
| ! | TTGTCCAGGTTAGCATTTTT+AGG | + | chr4_2:55660581-55660600 | Msa0608490:intron | 35.0% |
| TACACCTAAAAATGCTAACC+TGG | - | chr4_2:55660588-55660607 | None:intergenic | 35.0% | |
| CACAGGATCATATTAACAAC+TGG | + | chr4_2:55660685-55660704 | Msa0608490:intron | 35.0% | |
| GGTTTATTGGTAAGTCATCA+TGG | + | chr4_2:55660760-55660779 | Msa0608490:intron | 35.0% | |
| TCATGATACTTTGTTACCAC+AGG | + | chr4_2:55660889-55660908 | Msa0608490:intron | 35.0% | |
| CATCATGTATCAAAGGTAGA+AGG | + | chr4_2:55660955-55660974 | Msa0608490:CDS | 35.0% | |
| AATGTACGAAACAAACTACG+TGG | - | chr4_2:55661303-55661322 | None:intergenic | 35.0% | |
| !! | TTGCTTTTGCTTAGTGGAAA+TGG | + | chr4_2:55661391-55661410 | Msa0608490:three_prime_UTR | 35.0% |
| ATCAGAAATGGACAATTGGG+TGG | - | chr4_2:55652038-55652057 | None:intergenic | 40.0% | |
| !! | ACAAGTTTGTTGTTGCTGCA+GGG | - | chr4_2:55652340-55652359 | None:intergenic | 40.0% |
| ! | TGTTTGGTTCCACAGAAGAA+GGG | - | chr4_2:55653115-55653134 | None:intergenic | 40.0% |
| ! | ATGTTTGGTTCCACAGAAGA+AGG | - | chr4_2:55653116-55653135 | None:intergenic | 40.0% |
| TTCTTCTGTGGAACCAAACA+TGG | + | chr4_2:55653115-55653134 | Msa0608490:CDS | 40.0% | |
| ATGTTGAACTATTTGGACCG+AGG | + | chr4_2:55653509-55653528 | Msa0608490:CDS | 40.0% | |
| ! | AATGGTGTTAATGGACATCG+TGG | + | chr4_2:55653545-55653564 | Msa0608490:CDS | 40.0% |
| ! | ATGGTGTTAATGGACATCGT+GGG | + | chr4_2:55653546-55653565 | Msa0608490:CDS | 40.0% |
| ACACAGAGTCATGAATGACA+TGG | + | chr4_2:55653717-55653736 | Msa0608490:intron | 40.0% | |
| GTTGTCAAAGAAGGGAATCT+TGG | + | chr4_2:55653739-55653758 | Msa0608490:intron | 40.0% | |
| TTCTCTCTACATGCCCAAAA+GGG | - | chr4_2:55653834-55653853 | None:intergenic | 40.0% | |
| TTTCTCTCTACATGCCCAAA+AGG | - | chr4_2:55653835-55653854 | None:intergenic | 40.0% | |
| CTCCTTACTACCGAATCTAT+AGG | - | chr4_2:55653859-55653878 | None:intergenic | 40.0% | |
| AAGGATAGTAAGATCACGAG+AGG | + | chr4_2:55653892-55653911 | Msa0608490:intron | 40.0% | |
| ACTAAGTGGAATCGTCTACA+TGG | - | chr4_2:55654026-55654045 | None:intergenic | 40.0% | |
| ATGTAGACGATTCCACTTAG+TGG | + | chr4_2:55654025-55654044 | Msa0608490:intron | 40.0% | |
| TGTAGACGATTCCACTTAGT+GGG | + | chr4_2:55654026-55654045 | Msa0608490:intron | 40.0% | |
| GGGATAAAGCTTAAGGAAGA+AGG | + | chr4_2:55654046-55654065 | Msa0608490:intron | 40.0% | |
| TTCTCTCTACATGCCCAAAA+GGG | - | chr4_2:55653834-55653853 | None:intergenic | 40.0% | |
| TTTCTCTCTACATGCCCAAA+AGG | - | chr4_2:55653835-55653854 | None:intergenic | 40.0% | |
| CTCCTTACTACCGAATCTAT+AGG | - | chr4_2:55653859-55653878 | None:intergenic | 40.0% | |
| AAGGATAGTAAGATCACGAG+AGG | + | chr4_2:55653892-55653911 | Msa0608490:intron | 40.0% | |
| TGTAGATGATCCCACTTAGT+TGG | + | chr4_2:55654296-55654315 | Msa0608490:intron | 40.0% | |
| CTATCATGGTATGAAACACG+TGG | - | chr4_2:55654481-55654500 | None:intergenic | 40.0% | |
| ! | GTTTTGTACTTCTGTGTAGG+GGG | + | chr4_2:55654565-55654584 | Msa0608490:intron | 40.0% |
| ! | TTTTGTACTTCTGTGTAGGG+GGG | + | chr4_2:55654566-55654585 | Msa0608490:intron | 40.0% |
| !! | CTCTCATCTGCTTTTATGGT+TGG | + | chr4_2:55654621-55654640 | Msa0608490:CDS | 40.0% |
| ATGACTACTATGTGGCTCAT+TGG | + | chr4_2:55654771-55654790 | Msa0608490:intron | 40.0% | |
| TGACTACTATGTGGCTCATT+GGG | + | chr4_2:55654772-55654791 | Msa0608490:intron | 40.0% | |
| GGTCCAAAGTTCTCAGTATT+GGG | - | chr4_2:55655099-55655118 | None:intergenic | 40.0% | |
| AGGTCCAAAGTTCTCAGTAT+TGG | - | chr4_2:55655100-55655119 | None:intergenic | 40.0% | |
| CCCTTTAGACTTATTGGAGT+TGG | + | chr4_2:55655209-55655228 | Msa0608490:CDS | 40.0% | |
| TTGGAGTTGGATTGTCAGTT+TGG | + | chr4_2:55655222-55655241 | Msa0608490:CDS | 40.0% | |
| GAAAGAAAGACCACAGCATA+AGG | - | chr4_2:55655258-55655277 | None:intergenic | 40.0% | |
| AGTAACAAACCTGTGAAGCT+GGG | - | chr4_2:55655501-55655520 | None:intergenic | 40.0% | |
| AAGTAACAAACCTGTGAAGC+TGG | - | chr4_2:55655502-55655521 | None:intergenic | 40.0% | |
| GCAATTGGCTATGTATATGG+TGG | + | chr4_2:55656116-55656135 | Msa0608490:CDS | 40.0% | |
| GGGGAGGTAATTAAAAGAGT+AGG | + | chr4_2:55656294-55656313 | Msa0608490:intron | 40.0% | |
| !! | AGGTTGGAAGTCATTTTGGT+TGG | + | chr4_2:55656427-55656446 | Msa0608490:intron | 40.0% |
| !! | TGTGCACCTTTTAACTGCAA+AGG | - | chr4_2:55656519-55656538 | None:intergenic | 40.0% |
| ATAGTACCTTGAACTCCCAA+AGG | - | chr4_2:55656663-55656682 | None:intergenic | 40.0% | |
| ! | GTGCATGTTGTGTTACTACA+TGG | + | chr4_2:55656755-55656774 | Msa0608490:intron | 40.0% |
| CAGCACAGGAGAAAAAAATC+AGG | - | chr4_2:55656914-55656933 | None:intergenic | 40.0% | |
| GGAGAACATTCTCAACAATC+AGG | - | chr4_2:55657056-55657075 | None:intergenic | 40.0% | |
| ATGAAGGTGAAGTTCTCACT+TGG | - | chr4_2:55657476-55657495 | None:intergenic | 40.0% | |
| GATAATCATTCTCAGCTGGA+GGG | - | chr4_2:55657612-55657631 | None:intergenic | 40.0% | |
| ! | GTTTTTGTCGTCAACGTTCT+AGG | + | chr4_2:55657821-55657840 | Msa0608490:CDS | 40.0% |
| TTCATCTAATGCCAAGAGTG+TGG | + | chr4_2:55658126-55658145 | Msa0608490:intron | 40.0% | |
| ! | ATGCCCGATACCTAATTTTC+TGG | + | chr4_2:55658195-55658214 | Msa0608490:intron | 40.0% |
| TTTACAGGAGAGACTTAGGA+AGG | - | chr4_2:55658580-55658599 | None:intergenic | 40.0% | |
| GGAATTTACAGGAGAGACTT+AGG | - | chr4_2:55658584-55658603 | None:intergenic | 40.0% | |
| GATGGAGCAATGGAATTTAC+AGG | - | chr4_2:55658595-55658614 | None:intergenic | 40.0% | |
| AACTAGTTAGGATGGAGCAA+TGG | - | chr4_2:55658605-55658624 | None:intergenic | 40.0% | |
| GAGAAGCTGAAAAGAGTTCA+AGG | - | chr4_2:55658629-55658648 | None:intergenic | 40.0% | |
| TCATTGACAACATTAGTCGG+TGG | + | chr4_2:55658649-55658668 | Msa0608490:CDS | 40.0% | |
| CACCAATAGCAAAAAGAGCT+AGG | - | chr4_2:55658720-55658739 | None:intergenic | 40.0% | |
| !!! | ACTACTTGTTTTTGCCACTC+AGG | + | chr4_2:55658741-55658760 | Msa0608490:CDS | 40.0% |
| CCCGTACTTCTTATTGACAA+TGG | + | chr4_2:55659565-55659584 | Msa0608490:intron | 40.0% | |
| ! | TACATAGATAAGGGTGCGTT+TGG | - | chr4_2:55660264-55660283 | None:intergenic | 40.0% |
| !! | ATTGATAGTGGCCTCAAACT+TGG | - | chr4_2:55660499-55660518 | None:intergenic | 40.0% |
| ! | AAGTTTGAGGCCACTATCAA+TGG | + | chr4_2:55660498-55660517 | Msa0608490:CDS | 40.0% |
| GTAGACATAGCCATTGATAG+TGG | - | chr4_2:55660511-55660530 | None:intergenic | 40.0% | |
| ! | TTTTTCCAGCAGCTGCAATA+TGG | + | chr4_2:55660739-55660758 | Msa0608490:CDS | 40.0% |
| ATAAACCATATTGCAGCTGC+TGG | - | chr4_2:55660747-55660766 | None:intergenic | 40.0% | |
| GCAGCTGCAATATGGTTTAT+TGG | + | chr4_2:55660747-55660766 | Msa0608490:CDS | 40.0% | |
| GAGTGAGCATCATGTATCAA+AGG | + | chr4_2:55660948-55660967 | Msa0608490:CDS | 40.0% | |
| ! | TATATGCAATCGGAAAGTGC+TGG | + | chr4_2:55661141-55661160 | Msa0608490:three_prime_UTR | 40.0% |
| TTTACATGATGTGCCCAAGA+TGG | - | chr4_2:55661466-55661485 | None:intergenic | 40.0% | |
| GGTAGTCAAAGCTAGATGAC+TGG | - | chr4_2:55652212-55652231 | None:intergenic | 45.0% | |
| !! | CACAAGTTTGTTGTTGCTGC+AGG | - | chr4_2:55652341-55652360 | None:intergenic | 45.0% |
| ACAAGAGAGTTTGGAAGCTG+CGG | + | chr4_2:55652878-55652897 | Msa0608490:five_prime_UTR | 45.0% | |
| CATGCCAGGTAGAAAGAAGA+AGG | - | chr4_2:55652931-55652950 | None:intergenic | 45.0% | |
| ! | GAAGGTAACAAAAGCATGCC+AGG | - | chr4_2:55652945-55652964 | None:intergenic | 45.0% |
| GAAGGTTTCGGTTCATGTTC+AGG | - | chr4_2:55653065-55653084 | None:intergenic | 45.0% | |
| AACACCTAACCCTTCTTCTG+TGG | + | chr4_2:55653103-55653122 | Msa0608490:CDS | 45.0% | |
| AGAAGTTGCAGGAATCATGG+TGG | - | chr4_2:55653150-55653169 | None:intergenic | 45.0% | |
| CCAAGAAGTTGCAGGAATCA+TGG | - | chr4_2:55653153-55653172 | None:intergenic | 45.0% | |
| CCATGATTCCTGCAACTTCT+TGG | + | chr4_2:55653150-55653169 | Msa0608490:CDS | 45.0% | |
| GGTGTAAACCAAGAAGTTGC+AGG | - | chr4_2:55653161-55653180 | None:intergenic | 45.0% | |
| CATTGCTAGCTATTGCTCCT+CGG | - | chr4_2:55653529-55653548 | None:intergenic | 45.0% | |
| ACTGATGGTATCTGCAAGTC+TGG | + | chr4_2:55653575-55653594 | Msa0608490:CDS | 45.0% | |
| ! | TGGTGATAAATGCCCCCTTT+TGG | + | chr4_2:55653817-55653836 | Msa0608490:intron | 45.0% |
| ! | GGTGATAAATGCCCCCTTTT+GGG | + | chr4_2:55653818-55653837 | Msa0608490:intron | 45.0% |
| TCTCTCTACATGCCCAAAAG+GGG | - | chr4_2:55653833-55653852 | None:intergenic | 45.0% | |
| AGTAAGATCACGAGAGGCAA+AGG | + | chr4_2:55653898-55653917 | Msa0608490:intron | 45.0% | |
| ! | TGGTGATAAATGCCCCCTTT+TGG | + | chr4_2:55653817-55653836 | Msa0608490:intron | 45.0% |
| ! | GGTGATAAATGCCCCCTTTT+GGG | + | chr4_2:55653818-55653837 | Msa0608490:intron | 45.0% |
| TCTCTCTACATGCCCAAAAG+GGG | - | chr4_2:55653833-55653852 | None:intergenic | 45.0% | |
| AGTAAGATCACGAGAGGCAA+AGG | + | chr4_2:55653898-55653917 | Msa0608490:intron | 45.0% | |
| ACACGTGGAAAAGCTCATAC+AGG | - | chr4_2:55654466-55654485 | None:intergenic | 45.0% | |
| GTGCGTGTACTTGAAAGAGA+AGG | - | chr4_2:55655120-55655139 | None:intergenic | 45.0% | |
| ACTGTTGCAACCTTATGCTG+TGG | + | chr4_2:55655245-55655264 | Msa0608490:CDS | 45.0% | |
| CTTATTCTCTCTAGGCTCGT+TGG | + | chr4_2:55655421-55655440 | Msa0608490:intron | 45.0% | |
| ! | GGGGCGTTATCATCAATGAA+AGG | - | chr4_2:55655481-55655500 | None:intergenic | 45.0% |
| GTAACAAACCTGTGAAGCTG+GGG | - | chr4_2:55655500-55655519 | None:intergenic | 45.0% | |
| ATACCAGGCGGATATGCAAT+TGG | + | chr4_2:55656101-55656120 | Msa0608490:CDS | 45.0% | |
| ! | TGGCTATGTATATGGTGGAG+TGG | + | chr4_2:55656121-55656140 | Msa0608490:CDS | 45.0% |
| ! | TTGGTTGGCGTTATGCGTTT+TGG | + | chr4_2:55656442-55656461 | Msa0608490:CDS | 45.0% |
| ! | TGGTTGGCGTTATGCGTTTT+GGG | + | chr4_2:55656443-55656462 | Msa0608490:CDS | 45.0% |
| GCAGTTGAGACAGTTCCTTT+GGG | + | chr4_2:55656645-55656664 | Msa0608490:CDS | 45.0% | |
| ! | ACAGTTCCTTTGGGAGTTCA+AGG | + | chr4_2:55656654-55656673 | Msa0608490:CDS | 45.0% |
| ! | TTTTTGATGCACAGATGGGG+AGG | + | chr4_2:55657417-55657436 | Msa0608490:intron | 45.0% |
| AGGTGAAGTTCTCACTTGGA+AGG | - | chr4_2:55657472-55657491 | None:intergenic | 45.0% | |
| GGATAATCATTCTCAGCTGG+AGG | - | chr4_2:55657613-55657632 | None:intergenic | 45.0% | |
| GAGGGATAATCATTCTCAGC+TGG | - | chr4_2:55657616-55657635 | None:intergenic | 45.0% | |
| GTGCATCAGTCACTTAGAGA+TGG | - | chr4_2:55657696-55657715 | None:intergenic | 45.0% | |
| ! | TCATCGGTGCTTACTCGTAT+TGG | + | chr4_2:55658058-55658077 | Msa0608490:CDS | 45.0% |
| ! | CATCGGTGCTTACTCGTATT+GGG | + | chr4_2:55658059-55658078 | Msa0608490:CDS | 45.0% |
| ! | ATCGGTGCTTACTCGTATTG+GGG | + | chr4_2:55658060-55658079 | Msa0608490:CDS | 45.0% |
| GGAATATTGGGCACTTTAGC+AGG | + | chr4_2:55658317-55658336 | Msa0608490:CDS | 45.0% | |
| ATATTGGGCACTTTAGCAGG+AGG | + | chr4_2:55658320-55658339 | Msa0608490:CDS | 45.0% | |
| GTGCTCAATAGGATTCGAAG+GGG | - | chr4_2:55659352-55659371 | None:intergenic | 45.0% | |
| CGTGCTCAATAGGATTCGAA+GGG | - | chr4_2:55659353-55659372 | None:intergenic | 45.0% | |
| ACGTGCTCAATAGGATTCGA+AGG | - | chr4_2:55659354-55659373 | None:intergenic | 45.0% | |
| !!! | CGTTTGGCCCAACTTTTTTG+AGG | - | chr4_2:55660248-55660267 | None:intergenic | 45.0% |
| TTCTTGGGATTGAGGTTCTG+CGG | - | chr4_2:55661013-55661032 | None:intergenic | 45.0% | |
| GGTTAACCTTCTTGGGATTG+AGG | - | chr4_2:55661021-55661040 | None:intergenic | 45.0% | |
| CCTGTCTTCTCTTCAAGCAA+TGG | - | chr4_2:55661074-55661093 | None:intergenic | 45.0% | |
| CCATTGCTTGAAGAGAAGAC+AGG | + | chr4_2:55661071-55661090 | Msa0608490:three_prime_UTR | 45.0% | |
| !! | AAAGTGCTGGACACACGTTT+AGG | + | chr4_2:55661154-55661173 | Msa0608490:three_prime_UTR | 45.0% |
| !! | ATTATTAATTAAATAGAAAA+TGG | - | chr4_2:55652973-55652992 | None:intergenic | 5.0% |
| !! | TTATAACTAATTTATTATTA+CGG | - | chr4_2:55659519-55659538 | None:intergenic | 5.0% |
| !! | TTGATTAAATATATAATTAA+TGG | - | chr4_2:55659642-55659661 | None:intergenic | 5.0% |
| !! | ATAATGTAAATTATATTAAA+AGG | - | chr4_2:55659703-55659722 | None:intergenic | 5.0% |
| GAAATGGACAATTGGGTGGC+TGG | - | chr4_2:55652034-55652053 | None:intergenic | 50.0% | |
| GTTGTTGCTGCAGGGTATGA+GGG | - | chr4_2:55652332-55652351 | None:intergenic | 50.0% | |
| TGTTGTTGCTGCAGGGTATG+AGG | - | chr4_2:55652333-55652352 | None:intergenic | 50.0% | |
| CAAAGTGACGAGGATGTGGA+TGG | - | chr4_2:55652645-55652664 | None:intergenic | 50.0% | |
| TCGTCAAAGTGACGAGGATG+TGG | - | chr4_2:55652649-55652668 | None:intergenic | 50.0% | |
| !! | TTGGTGTCGTCAAAGTGACG+AGG | - | chr4_2:55652655-55652674 | None:intergenic | 50.0% |
| CAAAGTGACGAGGATGTGGA+TGG | - | chr4_2:55652645-55652664 | None:intergenic | 50.0% | |
| TCGTCAAAGTGACGAGGATG+TGG | - | chr4_2:55652649-55652668 | None:intergenic | 50.0% | |
| !! | TTGGTGTCGTCAAAGTGACG+AGG | - | chr4_2:55652655-55652674 | None:intergenic | 50.0% |
| CAAGAGAGTTTGGAAGCTGC+GGG | + | chr4_2:55652879-55652898 | Msa0608490:five_prime_UTR | 50.0% | |
| AAGAGAGTTTGGAAGCTGCG+GGG | + | chr4_2:55652880-55652899 | Msa0608490:five_prime_UTR | 50.0% | |
| GGTTCCACAGAAGAAGGGTT+AGG | - | chr4_2:55653110-55653129 | None:intergenic | 50.0% | |
| !! | AGGAATCATGGTGGACTTGG+GGG | - | chr4_2:55653141-55653160 | None:intergenic | 50.0% |
| !! | CAGGAATCATGGTGGACTTG+GGG | - | chr4_2:55653142-55653161 | None:intergenic | 50.0% |
| !! | GCAGGAATCATGGTGGACTT+GGG | - | chr4_2:55653143-55653162 | None:intergenic | 50.0% |
| !! | TGCAGGAATCATGGTGGACT+TGG | - | chr4_2:55653144-55653163 | None:intergenic | 50.0% |
| CGAGGAGCAATAGCTAGCAA+TGG | + | chr4_2:55653527-55653546 | Msa0608490:CDS | 50.0% | |
| ! | GGTATCTGCAAGTCTGGAAC+AGG | + | chr4_2:55653581-55653600 | Msa0608490:CDS | 50.0% |
| CTCTCTACATGCCCAAAAGG+GGG | - | chr4_2:55653832-55653851 | None:intergenic | 50.0% | |
| CTCTCTACATGCCCAAAAGG+GGG | - | chr4_2:55653832-55653851 | None:intergenic | 50.0% | |
| TAGCCAATTGCATATCCGCC+TGG | - | chr4_2:55656107-55656126 | None:intergenic | 50.0% | |
| !! | TTGGCGTTATGCGTTTTGGG+TGG | + | chr4_2:55656446-55656465 | Msa0608490:CDS | 50.0% |
| GGCAGTTGAGACAGTTCCTT+TGG | + | chr4_2:55656644-55656663 | Msa0608490:CDS | 50.0% | |
| AGAGATGGATGCCACACACT+TGG | - | chr4_2:55657681-55657700 | None:intergenic | 50.0% | |
| !!! | GTCGGTGGTGCGTTTTGTTT+TGG | + | chr4_2:55658664-55658683 | Msa0608490:CDS | 50.0% |
| !! | AGAGAAGGGAAGTACCTGAG+TGG | - | chr4_2:55658758-55658777 | None:intergenic | 50.0% |
| GGATTCGAAGGGGAATACAC+AGG | - | chr4_2:55659342-55659361 | None:intergenic | 50.0% | |
| ACCTGGACAACTCCAACAAG+AGG | - | chr4_2:55660571-55660590 | None:intergenic | 50.0% | |
| GCGGTCTTCTCTTCAAGCAA+CGG | - | chr4_2:55660994-55661013 | None:intergenic | 50.0% | |
| GCAGAACCTCAATCCCAAGA+AGG | + | chr4_2:55661012-55661031 | Msa0608490:CDS | 50.0% | |
| ! | CTCTTCAAGCAATGGTGCTG+TGG | - | chr4_2:55661066-55661085 | None:intergenic | 50.0% |
| ! | GGCTGGCGGCTTGAGTTTTT+GGG | - | chr4_2:55652017-55652036 | None:intergenic | 55.0% |
| ! | TGGCTGGCGGCTTGAGTTTT+TGG | - | chr4_2:55652018-55652037 | None:intergenic | 55.0% |
| ATGGACAATTGGGTGGCTGG+CGG | - | chr4_2:55652031-55652050 | None:intergenic | 55.0% | |
| AGAGAGTTTGGAAGCTGCGG+GGG | + | chr4_2:55652881-55652900 | Msa0608490:five_prime_UTR | 55.0% | |
| CATCGTGGGAGTTGCACTGA+TGG | + | chr4_2:55653560-55653579 | Msa0608490:CDS | 55.0% | |
| CTCTCTAGGCTCGTTGGTGT+TGG | + | chr4_2:55655427-55655446 | Msa0608490:intron | 55.0% | |
| ! | TGATAACGCCCCAGCTTCAC+AGG | + | chr4_2:55655489-55655508 | Msa0608490:CDS | 55.0% |
| !! | GCGTTATGCGTTTTGGGTGG+AGG | + | chr4_2:55656449-55656468 | Msa0608490:CDS | 55.0% |
| GACAACTCCAACAAGAGGCG+CGG | - | chr4_2:55660566-55660585 | None:intergenic | 55.0% | |
| GCCTCTTGTTGGAGTTGTCC+AGG | + | chr4_2:55660567-55660586 | Msa0608490:CDS | 55.0% | |
| TTTGGAAGCTGCGGGGGTGA+AGG | + | chr4_2:55652887-55652906 | Msa0608490:five_prime_UTR | 60.0% | |
| GTGGACTTGGGGGCCATGTT+TGG | - | chr4_2:55653131-55653150 | None:intergenic | 60.0% | |
| !! | TAGGCTCGTTGGTGTTGGCG+AGG | + | chr4_2:55655432-55655451 | Msa0608490:intron | 60.0% |
| TCGTATTGGGGCCCCAAAGC+TGG | + | chr4_2:55658072-55658091 | Msa0608490:CDS | 60.0% | |
| GTTCCTTCCGCGCCTCTTGT+TGG | + | chr4_2:55660556-55660575 | Msa0608490:CDS | 60.0% | |
| ! | ACTCCAACAAGAGGCGCGGA+AGG | - | chr4_2:55660562-55660581 | None:intergenic | 60.0% |
| ! | GATGGCGGCTCTATGCACAC+AGG | + | chr4_2:55660668-55660687 | Msa0608490:intron | 60.0% |
| CTCTTCAAGCAACGGCGCAG+TGG | - | chr4_2:55660986-55661005 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 55651952 | 55661516 | 55651952 | ID=Msa0608490;Name=Msa0608490 |
| chr4_2 | mRNA | 55651952 | 55661516 | 55651952 | ID=Msa0608490-mRNA-1;Parent=Msa0608490;Name=Msa0608490-mRNA-1;_AED=0.08;_eAED=0.08;_QI=912|0.93|0.94|1|0.93|0.88|17|478|554 |
| chr4_2 | exon | 55651952 | 55652527 | 55651952 | ID=Msa0608490-mRNA-1:exon:14187;Parent=Msa0608490-mRNA-1 |
| chr4_2 | exon | 55652714 | 55653186 | 55652714 | ID=Msa0608490-mRNA-1:exon:14188;Parent=Msa0608490-mRNA-1 |
| chr4_2 | exon | 55653481 | 55653609 | 55653481 | ID=Msa0608490-mRNA-1:exon:14189;Parent=Msa0608490-mRNA-1 |
| chr4_2 | exon | 55654584 | 55654685 | 55654584 | ID=Msa0608490-mRNA-1:exon:14190;Parent=Msa0608490-mRNA-1 |
| chr4_2 | exon | 55655202 | 55655306 | 55655202 | ID=Msa0608490-mRNA-1:exon:14191;Parent=Msa0608490-mRNA-1 |
| chr4_2 | exon | 55655435 | 55655510 | 55655435 | ID=Msa0608490-mRNA-1:exon:14192;Parent=Msa0608490-mRNA-1 |
| chr4_2 | exon | 55655984 | 55656142 | 55655984 | ID=Msa0608490-mRNA-1:exon:14193;Parent=Msa0608490-mRNA-1 |
| chr4_2 | exon | 55656429 | 55656531 | 55656429 | ID=Msa0608490-mRNA-1:exon:14194;Parent=Msa0608490-mRNA-1 |
| chr4_2 | exon | 55656613 | 55656675 | 55656613 | ID=Msa0608490-mRNA-1:exon:14195;Parent=Msa0608490-mRNA-1 |
| chr4_2 | exon | 55657431 | 55657476 | 55657431 | ID=Msa0608490-mRNA-1:exon:14196;Parent=Msa0608490-mRNA-1 |
| chr4_2 | exon | 55657745 | 55657842 | 55657745 | ID=Msa0608490-mRNA-1:exon:14197;Parent=Msa0608490-mRNA-1 |
| chr4_2 | exon | 55658037 | 55658113 | 55658037 | ID=Msa0608490-mRNA-1:exon:14198;Parent=Msa0608490-mRNA-1 |
| chr4_2 | exon | 55658275 | 55658388 | 55658275 | ID=Msa0608490-mRNA-1:exon:14199;Parent=Msa0608490-mRNA-1 |
| chr4_2 | exon | 55658643 | 55658762 | 55658643 | ID=Msa0608490-mRNA-1:exon:14200;Parent=Msa0608490-mRNA-1 |
| chr4_2 | exon | 55660460 | 55660588 | 55660460 | ID=Msa0608490-mRNA-1:exon:14201;Parent=Msa0608490-mRNA-1 |
| chr4_2 | exon | 55660690 | 55660768 | 55660690 | ID=Msa0608490-mRNA-1:exon:14202;Parent=Msa0608490-mRNA-1 |
| chr4_2 | exon | 55660911 | 55661516 | 55660911 | ID=Msa0608490-mRNA-1:exon:14203;Parent=Msa0608490-mRNA-1 |
| chr4_2 | five_prime_UTR | 55651952 | 55652527 | 55651952 | ID=Msa0608490-mRNA-1:five_prime_utr;Parent=Msa0608490-mRNA-1 |
| chr4_2 | five_prime_UTR | 55652714 | 55653049 | 55652714 | ID=Msa0608490-mRNA-1:five_prime_utr;Parent=Msa0608490-mRNA-1 |
| chr4_2 | CDS | 55653050 | 55653186 | 55653050 | ID=Msa0608490-mRNA-1:cds;Parent=Msa0608490-mRNA-1 |
| chr4_2 | CDS | 55653481 | 55653609 | 55653481 | ID=Msa0608490-mRNA-1:cds;Parent=Msa0608490-mRNA-1 |
| chr4_2 | CDS | 55654584 | 55654685 | 55654584 | ID=Msa0608490-mRNA-1:cds;Parent=Msa0608490-mRNA-1 |
| chr4_2 | CDS | 55655202 | 55655306 | 55655202 | ID=Msa0608490-mRNA-1:cds;Parent=Msa0608490-mRNA-1 |
| chr4_2 | CDS | 55655435 | 55655510 | 55655435 | ID=Msa0608490-mRNA-1:cds;Parent=Msa0608490-mRNA-1 |
| chr4_2 | CDS | 55655984 | 55656142 | 55655984 | ID=Msa0608490-mRNA-1:cds;Parent=Msa0608490-mRNA-1 |
| chr4_2 | CDS | 55656429 | 55656531 | 55656429 | ID=Msa0608490-mRNA-1:cds;Parent=Msa0608490-mRNA-1 |
| chr4_2 | CDS | 55656613 | 55656675 | 55656613 | ID=Msa0608490-mRNA-1:cds;Parent=Msa0608490-mRNA-1 |
| chr4_2 | CDS | 55657431 | 55657476 | 55657431 | ID=Msa0608490-mRNA-1:cds;Parent=Msa0608490-mRNA-1 |
| chr4_2 | CDS | 55657745 | 55657842 | 55657745 | ID=Msa0608490-mRNA-1:cds;Parent=Msa0608490-mRNA-1 |
| chr4_2 | CDS | 55658037 | 55658113 | 55658037 | ID=Msa0608490-mRNA-1:cds;Parent=Msa0608490-mRNA-1 |
| chr4_2 | CDS | 55658275 | 55658388 | 55658275 | ID=Msa0608490-mRNA-1:cds;Parent=Msa0608490-mRNA-1 |
| chr4_2 | CDS | 55658643 | 55658762 | 55658643 | ID=Msa0608490-mRNA-1:cds;Parent=Msa0608490-mRNA-1 |
| chr4_2 | CDS | 55660460 | 55660588 | 55660460 | ID=Msa0608490-mRNA-1:cds;Parent=Msa0608490-mRNA-1 |
| chr4_2 | CDS | 55660690 | 55660768 | 55660690 | ID=Msa0608490-mRNA-1:cds;Parent=Msa0608490-mRNA-1 |
| chr4_2 | CDS | 55660911 | 55661038 | 55660911 | ID=Msa0608490-mRNA-1:cds;Parent=Msa0608490-mRNA-1 |
| chr4_2 | three_prime_UTR | 55661039 | 55661516 | 55661039 | ID=Msa0608490-mRNA-1:three_prime_utr;Parent=Msa0608490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
