Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0612870 | XP_013457070.1 | 96.548 | 956 | 32 | 1 | 1 | 956 | 1 | 955 | 0.0 | 1880 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0612870 | sp|F4I7C7|WAPL1_ARATH | 47.643 | 594 | 287 | 13 | 1 | 584 | 58 | 637 | 3.92e-139 | 442 |
Msa0612870 | sp|F4I7C7|WAPL1_ARATH | 55.657 | 327 | 122 | 6 | 645 | 954 | 608 | 928 | 1.21e-86 | 301 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0612870 | A0A072UNY9 | 96.548 | 956 | 32 | 1 | 1 | 956 | 1 | 955 | 0.0 | 1880 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0054730 | Msa0612870 | 0.817270 | 3.597494e-52 | -8.615850e-47 |
Msa0086120 | Msa0612870 | -0.805311 | 1.419329e-49 | -8.615850e-47 |
Msa0612870 | Msa0923260 | 0.809695 | 1.666280e-50 | -8.615850e-47 |
Msa0612870 | Msa1030880 | 0.804451 | 2.146417e-49 | -8.615850e-47 |
Msa0612870 | Msa1078750 | 0.803750 | 3.003677e-49 | -8.615850e-47 |
Msa0612870 | Msa1157930 | 0.818006 | 2.454723e-52 | -8.615850e-47 |
Msa0612870 | Msa1168730 | 0.804884 | 1.743485e-49 | -8.615850e-47 |
Msa0612870 | Msa1296960 | 0.800140 | 1.657574e-48 | -8.615850e-47 |
Msa0612870 | Msa1396750 | 0.816586 | 5.124873e-52 | -8.615850e-47 |
Msa0585000 | Msa0612870 | 0.803550 | 3.304257e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0612870 | MtrunA17_Chr4g0047621 | 96.548 | 956 | 32 | 1 | 1 | 956 | 1 | 955 | 0.0 | 1880 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0612870 | AT1G11060.1 | 47.643 | 594 | 287 | 13 | 1 | 584 | 58 | 637 | 3.98e-140 | 442 |
Msa0612870 | AT1G11060.1 | 55.657 | 327 | 122 | 6 | 645 | 954 | 608 | 928 | 1.23e-87 | 301 |
Msa0612870 | AT1G61030.1 | 44.845 | 582 | 268 | 10 | 1 | 570 | 1 | 541 | 5.78e-133 | 421 |
Msa0612870 | AT1G61030.1 | 51.685 | 356 | 147 | 9 | 612 | 955 | 497 | 839 | 7.36e-91 | 308 |
Find 256 sgRNAs with CRISPR-Local
Find 672 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTCTTCCTGGAACTATTT+TGG | 0.054582 | 4_2:-61408213 | None:intergenic |
CATTCTTCCTGGAACTATTT+TGG | 0.057021 | 4_2:-61408075 | None:intergenic |
GCTTAATGACCCTTTCTTTA+TGG | 0.079015 | 4_2:+61407009 | Msa0612870:CDS |
GACAATAGTTGATGGAATTT+TGG | 0.108553 | 4_2:+61404322 | Msa0612870:CDS |
GAGGAAGAATGTTCACTTTA+AGG | 0.140023 | 4_2:+61408363 | Msa0612870:CDS |
CCCAATTCAATCGACGATTT+TGG | 0.157665 | 4_2:+61403751 | Msa0612870:CDS |
TGACTCTTCTTGACTCATTT+TGG | 0.158032 | 4_2:-61408554 | None:intergenic |
TCTGGGCTTGCTTGTAAATC+TGG | 0.214053 | 4_2:+61409057 | Msa0612870:CDS |
GTACAGCCATGTCTTGCTTT+AGG | 0.239924 | 4_2:+61411176 | Msa0612870:three_prime_UTR |
TACAATTAACTAGAACTTCT+TGG | 0.244111 | 4_2:-61405354 | None:intergenic |
GTATGTGCGAACAATCATTT+TGG | 0.248192 | 4_2:-61403560 | None:intergenic |
TTATCTGCCATTTCTCTTGA+TGG | 0.262164 | 4_2:+61405472 | Msa0612870:CDS |
AGTCTGATACGTCGTCGTTT+AGG | 0.262381 | 4_2:-61403627 | None:intergenic |
ACCAAAATCGTCGATTGAAT+TGG | 0.284859 | 4_2:-61403752 | None:intergenic |
CGCCGCAAACCATCAATTTC+CGG | 0.297863 | 4_2:+61403586 | Msa0612870:CDS |
GTCTGATACGTCGTCGTTTA+GGG | 0.306575 | 4_2:-61403626 | None:intergenic |
GCAGGAATTTCATCTGTCTT+TGG | 0.310658 | 4_2:+61411068 | Msa0612870:intron |
CCAAAATCGTCGATTGAATT+GGG | 0.338596 | 4_2:-61403751 | None:intergenic |
TCGGATCAGAAGGGCTAGTT+TGG | 0.346491 | 4_2:+61403942 | Msa0612870:CDS |
CATTCTTCCTCGAACTACTT+AGG | 0.349484 | 4_2:-61408351 | None:intergenic |
GTAGAGTGGGTCTTGGGATT+GGG | 0.351778 | 4_2:-61403668 | None:intergenic |
TCTTAAGTGCCTGAAGATAA+TGG | 0.352174 | 4_2:+61406484 | Msa0612870:CDS |
TGGGTCTTGGGATTGGGATT+GGG | 0.353604 | 4_2:-61403662 | None:intergenic |
GCAATTAATTGACAGCCAAT+AGG | 0.354576 | 4_2:-61408866 | None:intergenic |
TTGATGGAGGCGCAGGAGTT+TGG | 0.359647 | 4_2:+61403853 | Msa0612870:CDS |
GAGGTTAATTTCGCTCTTGA+TGG | 0.361853 | 4_2:+61403898 | Msa0612870:CDS |
GGTGAAAGTGAGGCGGGAGC+TGG | 0.363636 | 4_2:+61410197 | Msa0612870:CDS |
GTGGGTCTTGGGATTGGGAT+TGG | 0.365270 | 4_2:-61403663 | None:intergenic |
GTAATTCCTACTGGAACTAA+TGG | 0.366824 | 4_2:-61407837 | None:intergenic |
TCAGCAATGTTAACCACTTT+GGG | 0.367940 | 4_2:-61405432 | None:intergenic |
TATGTTGATGAATTTCGATT+TGG | 0.368782 | 4_2:-61403488 | None:intergenic |
GGTAGAGTGGGTCTTGGGAT+TGG | 0.371751 | 4_2:-61403669 | None:intergenic |
TTGAGAAGAGAAAGCGAAAT+CGG | 0.371928 | 4_2:-61403692 | None:intergenic |
CGTAAACTGAACATTCTTCC+TGG | 0.374073 | 4_2:-61408224 | None:intergenic |
GGTAGCAGCTGCAAGATTGC+TGG | 0.381115 | 4_2:-61404366 | None:intergenic |
CTATCTTCCAAGACTACAAC+AGG | 0.386943 | 4_2:-61408118 | None:intergenic |
TTGACTAACGACAACCCTAT+TGG | 0.388364 | 4_2:+61408851 | Msa0612870:CDS |
CTATCTTCCAAGATTACAAC+CGG | 0.392705 | 4_2:-61408256 | None:intergenic |
CTATCTTCCAAGATTACAAC+CGG | 0.392705 | 4_2:-61408394 | None:intergenic |
TTGATAGTTGTGGATACAAT+TGG | 0.396412 | 4_2:-61405217 | None:intergenic |
CATCAAATGCAAAGGGGTCT+TGG | 0.396562 | 4_2:-61408417 | None:intergenic |
CTAGCCCTTCTGATCCGAAT+TGG | 0.396792 | 4_2:-61403937 | None:intergenic |
CACTAGTTAAAATGTAGAAA+AGG | 0.398233 | 4_2:-61404388 | None:intergenic |
CGATAGTAGGTCCCACTTAG+AGG | 0.400082 | 4_2:-61408455 | None:intergenic |
AAGTACCCCGGTTGTGATCT+TGG | 0.401621 | 4_2:+61401751 | Msa0612870:five_prime_UTR |
GTCAGCAATGTTAACCACTT+TGG | 0.402172 | 4_2:-61405433 | None:intergenic |
CTACTGGAACTAATGGATAT+AGG | 0.404595 | 4_2:-61407830 | None:intergenic |
CAATTAATTGACAGCCAATA+GGG | 0.404969 | 4_2:-61408865 | None:intergenic |
AAGTACCCCGGTTGTAATCT+TGG | 0.406401 | 4_2:+61408249 | Msa0612870:CDS |
CATCAAATGCAAATGGATCT+TGG | 0.407697 | 4_2:-61408279 | None:intergenic |
CCACGACCCAAAATAGTTCC+AGG | 0.411206 | 4_2:+61408068 | Msa0612870:CDS |
CTATCTTCCAAGATCACAAC+CGG | 0.412009 | 4_2:-61401758 | None:intergenic |
ATTTCGCTCTTGATGGGCTT+CGG | 0.413660 | 4_2:+61403905 | Msa0612870:CDS |
ACTTCCTTCTTCAGAAGGCT+TGG | 0.414944 | 4_2:+61410115 | Msa0612870:CDS |
ACGTACCCCGGTTGTAATCT+TGG | 0.416580 | 4_2:+61408387 | Msa0612870:CDS |
TTCTTTACCATCAAGAGAAA+TGG | 0.418970 | 4_2:-61405479 | None:intergenic |
GTCATAACTTATGTCAGAAC+TGG | 0.426510 | 4_2:-61408599 | None:intergenic |
ACAGGGACACCTTCAGTAAA+GGG | 0.427291 | 4_2:-61408100 | None:intergenic |
CTATGACCCAAAATAGTTCC+AGG | 0.431367 | 4_2:+61408206 | Msa0612870:CDS |
GTGAAAGTGAGGCGGGAGCT+GGG | 0.432770 | 4_2:+61410198 | Msa0612870:CDS |
GTGGTTTGTGTGGTGGTTGG+TGG | 0.433810 | 4_2:-61403515 | None:intergenic |
GTTTGTGTGGTGGTTGGTGG+CGG | 0.434484 | 4_2:-61403512 | None:intergenic |
AAGGCTTGGACCAGGAGGTT+CGG | 0.436011 | 4_2:+61410129 | Msa0612870:CDS |
TAAGGAGGCAATCAGTTAGA+AGG | 0.436868 | 4_2:-61408633 | None:intergenic |
AATGGAGAATGTTCAGCTTA+CGG | 0.440258 | 4_2:+61401727 | None:intergenic |
ATTCTTCCTCGAACTACTTA+GGG | 0.440300 | 4_2:-61408350 | None:intergenic |
ATCGGGGTAGAGTGGGTCTT+GGG | 0.442872 | 4_2:-61403674 | None:intergenic |
AAAAGGACCATCTATGTGAT+AGG | 0.443163 | 4_2:+61408996 | Msa0612870:CDS |
AGTAAAGGGAACATTCTTCC+TGG | 0.443265 | 4_2:-61408086 | None:intergenic |
GAATACGTTCCGGAAATTGA+TGG | 0.443414 | 4_2:-61403595 | None:intergenic |
AGACTTGCTAAGTTGTGATC+TGG | 0.443554 | 4_2:-61410732 | None:intergenic |
TCAGCTCCGTAAAAGACAAT+GGG | 0.444372 | 4_2:-61406764 | None:intergenic |
TGCTTTGTCTTTGATAGTTG+TGG | 0.445089 | 4_2:-61405227 | None:intergenic |
CACACCATTGTAATTCCTAC+TGG | 0.446552 | 4_2:-61407846 | None:intergenic |
TTCGGAAAGGTCAACCAATT+CGG | 0.448470 | 4_2:+61403923 | Msa0612870:CDS |
TTGAGAAGGATGGTCGTAAC+AGG | 0.449162 | 4_2:+61409080 | Msa0612870:CDS |
TTGGGATTGGGATTGGGAAA+GGG | 0.449889 | 4_2:-61403656 | None:intergenic |
AAAGACAATGGGGTTGCCTT+AGG | 0.453975 | 4_2:-61406753 | None:intergenic |
TTCCGGAAATTGATGGTTTG+CGG | 0.454271 | 4_2:-61403588 | None:intergenic |
ATTTGTCTTTCAGAATTGTA+AGG | 0.456261 | 4_2:+61406397 | Msa0612870:intron |
TGAGAAGAGAAAGCGAAATC+GGG | 0.458118 | 4_2:-61403691 | None:intergenic |
ACCGAGCACATGTCAATAGT+TGG | 0.463917 | 4_2:-61407913 | None:intergenic |
GCTATGTCTATGTTAATTGC+TGG | 0.464905 | 4_2:+61408908 | Msa0612870:CDS |
ACGGTGGTTTGTGTGGTGGT+TGG | 0.466560 | 4_2:-61403518 | None:intergenic |
AGGTTAATTTCGCTCTTGAT+GGG | 0.467144 | 4_2:+61403899 | Msa0612870:CDS |
TGCTGCCCATGGAGGGTTGG+AGG | 0.467231 | 4_2:+61408886 | Msa0612870:CDS |
GTGCCACAACACAGCAAAGA+AGG | 0.467493 | 4_2:+61403983 | Msa0612870:CDS |
TCATCCTCATCAAATGCAAA+TGG | 0.468762 | 4_2:-61408286 | None:intergenic |
CTTGGGATTGGGATTGGGAA+AGG | 0.469988 | 4_2:-61403657 | None:intergenic |
TAACACAACAAGGTGATTCA+AGG | 0.470102 | 4_2:-61405171 | None:intergenic |
AAGCCTTCTTTGCTGTGTTG+TGG | 0.473030 | 4_2:-61403986 | None:intergenic |
GTTCTACTTCCTTCTTCAGA+AGG | 0.473358 | 4_2:+61410110 | Msa0612870:CDS |
CATCAAATGCAAATGGATCC+TGG | 0.473698 | 4_2:-61401781 | None:intergenic |
TCATCCTCATCAAATGCAAA+GGG | 0.473724 | 4_2:-61408424 | None:intergenic |
AACAGGGACACCTTCAGTAA+AGG | 0.474820 | 4_2:-61408101 | None:intergenic |
TCTAAGTGGGACCTACTATC+GGG | 0.476412 | 4_2:+61408457 | Msa0612870:CDS |
TTCTTCAGAAGGCTTGGACC+AGG | 0.476652 | 4_2:+61410121 | Msa0612870:CDS |
GGCCAGCGATGATTCTGAAC+TGG | 0.476713 | 4_2:+61407030 | Msa0612870:CDS |
ACTCATTTGCTTGGAATGAA+AGG | 0.476771 | 4_2:+61406720 | Msa0612870:CDS |
GTGGTTAACATTGCTGACTA+TGG | 0.479297 | 4_2:+61405438 | Msa0612870:CDS |
CATCAAATGCAAAGGGATCA+TGG | 0.479401 | 4_2:-61408141 | None:intergenic |
AGGATCAATTCATCCACATC+TGG | 0.481164 | 4_2:+61408004 | Msa0612870:CDS |
AATCGGGGTAGAGTGGGTCT+TGG | 0.482811 | 4_2:-61403675 | None:intergenic |
AGGTGTCCCTGTTGTAGTCT+TGG | 0.484408 | 4_2:+61408111 | Msa0612870:CDS |
ACTAGTTAAAATGTAGAAAA+GGG | 0.486321 | 4_2:-61404387 | None:intergenic |
TCTGGTGCTGTACGGAAGAC+TGG | 0.486444 | 4_2:+61406061 | Msa0612870:CDS |
TGCTGTTCTACAAGGAGAAA+AGG | 0.486486 | 4_2:+61410520 | Msa0612870:CDS |
TTGGGATTGGGAAAGGGAAA+GGG | 0.486542 | 4_2:-61403650 | None:intergenic |
TCATCGCTGGCCATAAAGAA+AGG | 0.486705 | 4_2:-61407019 | None:intergenic |
CCGAGCACATGTCAATAGTT+GGG | 0.486788 | 4_2:-61407912 | None:intergenic |
TCCGGCGACGTCGACGTTGA+TGG | 0.486979 | 4_2:+61403837 | Msa0612870:CDS |
ATGGCAAAGACAATAGTTGA+TGG | 0.488358 | 4_2:+61404314 | Msa0612870:CDS |
AAATCCCTTGAGAACTGAAA+AGG | 0.489413 | 4_2:+61408979 | Msa0612870:CDS |
GATCAGTTAAGAGACTATAA+AGG | 0.490599 | 4_2:+61407052 | Msa0612870:CDS |
CTTGGACCAGGAGGTTCGGC+GGG | 0.491437 | 4_2:+61410133 | Msa0612870:CDS |
AGAAGGCTTCTTCGTTCTCA+AGG | 0.491687 | 4_2:+61404000 | Msa0612870:CDS |
TACGTCGTCGTTTAGGGAAG+AGG | 0.493043 | 4_2:-61403620 | None:intergenic |
GAATACGGTGAAAGATCAAA+TGG | 0.493152 | 4_2:+61411145 | Msa0612870:exon |
ACCTGTGTTGGACAGATTTG+TGG | 0.497785 | 4_2:+61410758 | Msa0612870:CDS |
TTAGATGCCTATCACATAGA+TGG | 0.498416 | 4_2:-61409003 | None:intergenic |
TGGTCCAAGCCTTCTGAAGA+AGG | 0.498478 | 4_2:-61410119 | None:intergenic |
GTTGACGGTGGTTTGTGTGG+TGG | 0.499054 | 4_2:-61403522 | None:intergenic |
ATTGTCATTAAAATGCTCTC+AGG | 0.500925 | 4_2:+61406792 | Msa0612870:CDS |
GTCAACCAATTCGGATCAGA+AGG | 0.501857 | 4_2:+61403932 | Msa0612870:CDS |
GCAGGAGTTTGGCGAGATGA+TGG | 0.504193 | 4_2:+61403864 | Msa0612870:CDS |
TCTCCTTGTAGAACAGCAGC+AGG | 0.505321 | 4_2:-61410515 | None:intergenic |
ATTGGGATTGGGAAAGGGAA+AGG | 0.507457 | 4_2:-61403651 | None:intergenic |
TTCTAGATCTATGTCTGCGT+CGG | 0.512413 | 4_2:+61406957 | Msa0612870:intron |
TGTGATCTTGGAAGATAGCC+AGG | 0.514299 | 4_2:+61401763 | Msa0612870:five_prime_UTR |
AACCACTTTGGGCATAACTC+TGG | 0.515359 | 4_2:-61405421 | None:intergenic |
TTTAGGATTTGTTGCTACCC+AGG | 0.516773 | 4_2:+61411193 | Msa0612870:three_prime_UTR |
ATATCACCATGCTGGTGATA+CGG | 0.516959 | 4_2:+61411331 | Msa0612870:three_prime_UTR |
ACTATTGACATGTGCTCGGT+TGG | 0.517595 | 4_2:+61407916 | Msa0612870:CDS |
CTCTAAGTGGGACCTACTAT+CGG | 0.518152 | 4_2:+61408456 | Msa0612870:CDS |
AGAAGTTTCGAGCCAAGACT+TGG | 0.519231 | 4_2:-61405250 | None:intergenic |
TGAAAGTGAGGCGGGAGCTG+GGG | 0.520144 | 4_2:+61410199 | Msa0612870:CDS |
ACATAGCCTCCAACCCTCCA+TGG | 0.523096 | 4_2:-61408892 | None:intergenic |
GGAAGCTGAGAAAATGATTG+TGG | 0.525325 | 4_2:+61410541 | Msa0612870:CDS |
TCGTTACAGACTCATTTGCT+TGG | 0.526301 | 4_2:+61406711 | Msa0612870:intron |
TAACATCCCGCCGAACCTCC+TGG | 0.526713 | 4_2:-61410139 | None:intergenic |
AAAGACAAAGCACCAAGTCT+TGG | 0.528110 | 4_2:+61405238 | Msa0612870:CDS |
GGCACTTAAGAAGCAAGGTT+AGG | 0.528234 | 4_2:-61406472 | None:intergenic |
TAGCATTTCTTTCCACGGAA+AGG | 0.528323 | 4_2:+61410585 | Msa0612870:CDS |
AACCAGGGTGAAAGTGAGGC+GGG | 0.528592 | 4_2:+61410191 | Msa0612870:CDS |
TCCATCAACGTCGACGTCGC+CGG | 0.529306 | 4_2:-61403838 | None:intergenic |
GGAAGAGGATGAATACGTTC+CGG | 0.529989 | 4_2:-61403605 | None:intergenic |
CCACGTCCCTAAGTAGTTCG+AGG | 0.530299 | 4_2:+61408344 | Msa0612870:CDS |
TCATCGAGTCATGTAGAATA+CGG | 0.530850 | 4_2:+61411130 | Msa0612870:CDS |
TTGCCTCCTTACTGCTGTCA+AGG | 0.531934 | 4_2:+61408645 | Msa0612870:CDS |
CTTCAGGCACTTAAGAAGCA+AGG | 0.532826 | 4_2:-61406477 | None:intergenic |
ATCATCCTCATCAAATGCAA+AGG | 0.533512 | 4_2:-61408425 | None:intergenic |
GATGACGGTGAGCTGAAAGA+AGG | 0.533860 | 4_2:-61408938 | None:intergenic |
GTTAGAATTCTTAATAGAAG+AGG | 0.534143 | 4_2:-61407876 | None:intergenic |
ATCAGCTCCGTAAAAGACAA+TGG | 0.535349 | 4_2:-61406765 | None:intergenic |
GTCATTAAGCTTGTTATCAA+CGG | 0.536873 | 4_2:-61406996 | None:intergenic |
GCTCTTGATGGGCTTCGGAA+AGG | 0.538706 | 4_2:+61403910 | Msa0612870:CDS |
GCTTCTAGCATTTCTTTCCA+CGG | 0.540958 | 4_2:+61410580 | Msa0612870:CDS |
GATCCTGCTGCTGTTCTACA+AGG | 0.541132 | 4_2:+61410512 | Msa0612870:CDS |
GCTTGGACCAGGAGGTTCGG+CGG | 0.541959 | 4_2:+61410132 | Msa0612870:CDS |
AGTCAAGAAGAGTCAAGTGA+TGG | 0.542611 | 4_2:+61408562 | Msa0612870:CDS |
ATGATATTGCGCCCTCTAAG+TGG | 0.550332 | 4_2:+61408443 | Msa0612870:CDS |
GTCATCCTCATCAAATGCAA+AGG | 0.550505 | 4_2:-61408149 | None:intergenic |
TCATCCTCATCAAATGCAAA+GGG | 0.551115 | 4_2:-61408148 | None:intergenic |
GTAGCAGCTGCAAGATTGCT+GGG | 0.551550 | 4_2:-61404365 | None:intergenic |
TGAGAACGGCATATAAAAGT+TGG | 0.552352 | 4_2:-61411289 | None:intergenic |
AACATTGCTGACTATGGAGA+AGG | 0.554008 | 4_2:+61405444 | Msa0612870:CDS |
GAGGCAATCAGTTAGAAGGC+TGG | 0.554722 | 4_2:-61408629 | None:intergenic |
CTCAAGATTCTTCCTCTCAG+TGG | 0.555445 | 4_2:+61403710 | Msa0612870:CDS |
AGCAAGTCTTGTACCTGTGT+TGG | 0.555893 | 4_2:+61410746 | Msa0612870:CDS |
GAATTACAATGGTGTGGAGA+GGG | 0.556952 | 4_2:+61407853 | Msa0612870:CDS |
AAGAATGTTCCCTTTACTGA+AGG | 0.558436 | 4_2:+61408091 | Msa0612870:CDS |
AAAATACCTTGACAGCAGTA+AGG | 0.558563 | 4_2:-61408651 | None:intergenic |
AAAGCGAAATCGGGGTAGAG+TGG | 0.559686 | 4_2:-61403682 | None:intergenic |
CGGAGATCGGTGGTTGACGG+TGG | 0.559880 | 4_2:-61403534 | None:intergenic |
GTCGACGTTGATGGAGGCGC+AGG | 0.560181 | 4_2:+61403846 | Msa0612870:CDS |
GTGGTCGACGGGAGCCAAAG+AGG | 0.560430 | 4_2:+61403779 | Msa0612870:CDS |
CAGAAACCTCTGGTGCTGTA+CGG | 0.570807 | 4_2:+61406053 | Msa0612870:intron |
AATTGCTGCCCATGGAGGGT+TGG | 0.571145 | 4_2:+61408883 | Msa0612870:CDS |
ATGACGGTGAGCTGAAAGAA+GGG | 0.571829 | 4_2:-61408937 | None:intergenic |
AATCGGAGATCGGTGGTTGA+CGG | 0.574417 | 4_2:-61403537 | None:intergenic |
CCCAACTATTGACATGTGCT+CGG | 0.574965 | 4_2:+61407912 | Msa0612870:CDS |
TTTATCTGAGCAAAGGATGA+CGG | 0.575426 | 4_2:-61408953 | None:intergenic |
CTCCCGCCTCACTTTCACCC+TGG | 0.576417 | 4_2:-61410193 | None:intergenic |
TGGTCGACGGGAGCCAAAGA+GGG | 0.577988 | 4_2:+61403780 | Msa0612870:CDS |
GCTTGTAAATCTGGTTGAGA+AGG | 0.578725 | 4_2:+61409066 | Msa0612870:CDS |
AGATCCATTTGCATTTGATG+AGG | 0.578867 | 4_2:+61408282 | Msa0612870:CDS |
CAATTAATTGCTGCCCATGG+AGG | 0.579731 | 4_2:+61408878 | Msa0612870:CDS |
AGACCCCTTTGCATTTGATG+AGG | 0.581163 | 4_2:+61408420 | Msa0612870:CDS |
GAAGGCTTCTTCGTTCTCAA+GGG | 0.581373 | 4_2:+61404001 | Msa0612870:CDS |
GAATTGTCATTCAGATCTGA+AGG | 0.585420 | 4_2:+61406147 | Msa0612870:CDS |
TGATATTGCGCCCTCTAAGT+GGG | 0.585660 | 4_2:+61408444 | Msa0612870:CDS |
CATCGCTGGCCATAAAGAAA+GGG | 0.587555 | 4_2:-61407018 | None:intergenic |
GGTTGCACACAGACTATGCT+AGG | 0.587812 | 4_2:-61411398 | None:intergenic |
CATAGCCTCCAACCCTCCAT+GGG | 0.588009 | 4_2:-61408891 | None:intergenic |
GAAAGGAAAGTTGAGTCCTA+AGG | 0.588906 | 4_2:+61406737 | Msa0612870:CDS |
GTAAATCTGGTTGAGAAGGA+TGG | 0.589105 | 4_2:+61409070 | Msa0612870:CDS |
GTGGTTGACGGTGGTTTGTG+TGG | 0.589492 | 4_2:-61403525 | None:intergenic |
TCAGTTTACGAGAAGTACCC+CGG | 0.590409 | 4_2:+61408237 | Msa0612870:CDS |
GTATCAGTAGTTGATGTGCT+AGG | 0.592926 | 4_2:-61407965 | None:intergenic |
ATCCAGTTCAGAATCATCGC+TGG | 0.594748 | 4_2:-61407032 | None:intergenic |
AGCTTGTTATCAACGGACAC+AGG | 0.596570 | 4_2:-61406989 | None:intergenic |
GCATCTAACTGACCACGAGT+TGG | 0.597868 | 4_2:+61409018 | Msa0612870:CDS |
CAGTAGGAATTACAATGGTG+TGG | 0.598823 | 4_2:+61407847 | Msa0612870:CDS |
AAGCGAAATCGGGGTAGAGT+GGG | 0.599359 | 4_2:-61403681 | None:intergenic |
ATAAGAAGTTCACCTTTCCG+TGG | 0.602713 | 4_2:-61410597 | None:intergenic |
AATTAATTGCTGCCCATGGA+GGG | 0.603684 | 4_2:+61408879 | Msa0612870:CDS |
TGATCCCTTTGCATTTGATG+AGG | 0.604280 | 4_2:+61408144 | Msa0612870:CDS |
TTCAGAAGGCTTGGACCAGG+AGG | 0.605157 | 4_2:+61410124 | Msa0612870:CDS |
GATAGTAGGTCCCACTTAGA+GGG | 0.607332 | 4_2:-61408454 | None:intergenic |
AAGAGTATATGCGTTGAGAA+CGG | 0.610821 | 4_2:-61411303 | None:intergenic |
GTCAAGAAGAGTCAAGTGAT+GGG | 0.610912 | 4_2:+61408563 | Msa0612870:CDS |
GGCTAACCAGGGTGAAAGTG+AGG | 0.611463 | 4_2:+61410187 | Msa0612870:CDS |
ATTAGAAATTTAACACAACA+AGG | 0.611971 | 4_2:-61405181 | None:intergenic |
TACTTGTGTACAGAAACCTC+TGG | 0.614836 | 4_2:+61406043 | Msa0612870:intron |
CCTCGAACTACTTAGGGACG+TGG | 0.619708 | 4_2:-61408344 | None:intergenic |
TCACTTTAAGGAACGTACCC+CGG | 0.622558 | 4_2:+61408375 | Msa0612870:CDS |
ATACATACTCACTAAAGATG+AGG | 0.627563 | 4_2:+61407984 | Msa0612870:CDS |
ACTACTGCAAGAACCAGATG+TGG | 0.629778 | 4_2:-61408017 | None:intergenic |
AGTCTTCCGTACAGCACCAG+AGG | 0.630144 | 4_2:-61406059 | None:intergenic |
GATGATGGAGCAAAATGATG+AGG | 0.630944 | 4_2:+61403879 | Msa0612870:CDS |
ATCGTCGATTGAATTGGGGT+CGG | 0.632919 | 4_2:-61403746 | None:intergenic |
CAAAATCGTCGATTGAATTG+GGG | 0.633287 | 4_2:-61403750 | None:intergenic |
GGCGACGTCGACGTTGATGG+AGG | 0.633323 | 4_2:+61403840 | Msa0612870:CDS |
GACCAGAGTTATGCCCAAAG+TGG | 0.635018 | 4_2:+61405419 | Msa0612870:CDS |
GGAATTACAATGGTGTGGAG+AGG | 0.637221 | 4_2:+61407852 | Msa0612870:CDS |
ACCACAAATCTGTCCAACAC+AGG | 0.637664 | 4_2:-61410759 | None:intergenic |
TAACCAGGGTGAAAGTGAGG+CGG | 0.641799 | 4_2:+61410190 | Msa0612870:CDS |
TGTCAATTAATTGCTGCCCA+TGG | 0.645816 | 4_2:+61408875 | Msa0612870:CDS |
GATTGTCAGCAATTGCTGCA+CGG | 0.645862 | 4_2:-61410707 | None:intergenic |
GTTATCAACGGACACAGGAG+AGG | 0.648725 | 4_2:-61406984 | None:intergenic |
TCAACCAATTCGGATCAGAA+GGG | 0.657859 | 4_2:+61403933 | Msa0612870:CDS |
TGAAGAAGGAAGTAGAACAC+TGG | 0.658167 | 4_2:-61410105 | None:intergenic |
ATACCTTGACAGCAGTAAGG+AGG | 0.658288 | 4_2:-61408648 | None:intergenic |
CAACGTGTCAGAATAACAGT+GGG | 0.658807 | 4_2:+61405389 | Msa0612870:CDS |
TATCTTCCAAGATCACAACC+GGG | 0.660767 | 4_2:-61401757 | None:intergenic |
AGTTCCAGTAGGAATTACAA+TGG | 0.660824 | 4_2:+61407842 | Msa0612870:CDS |
TCAGCTTACGGAAAGTACCC+CGG | 0.662482 | 4_2:+61401739 | Msa0612870:five_prime_UTR |
ACAAATCCTAAAGCAAGACA+TGG | 0.663021 | 4_2:-61411182 | None:intergenic |
GCATTTGATGAGGATGACAG+TGG | 0.664713 | 4_2:+61408154 | Msa0612870:CDS |
GCAACGTGTCAGAATAACAG+TGG | 0.667678 | 4_2:+61405388 | Msa0612870:CDS |
GAGAAGAGAAAGCGAAATCG+GGG | 0.669206 | 4_2:-61403690 | None:intergenic |
GCATCTCCGTATCACCAGCA+TGG | 0.672316 | 4_2:-61411337 | None:intergenic |
TATCTTCCAAGATTACAACC+GGG | 0.672434 | 4_2:-61408255 | None:intergenic |
TATCTTCCAAGATTACAACC+GGG | 0.672434 | 4_2:-61408393 | None:intergenic |
CAACAAGAAAATCCAACTCG+TGG | 0.673146 | 4_2:-61409030 | None:intergenic |
ATCGAAGAAAGACCACTGAG+AGG | 0.674356 | 4_2:-61403722 | None:intergenic |
CTATATCCATTAGTTCCAGT+AGG | 0.678113 | 4_2:+61407831 | Msa0612870:CDS |
CTAAGTGGGACCTACTATCG+GGG | 0.685030 | 4_2:+61408458 | Msa0612870:CDS |
ATCTTCCAAGATTACAACCG+GGG | 0.696587 | 4_2:-61408254 | None:intergenic |
ATCTTCCAAGATTACAACCG+GGG | 0.696587 | 4_2:-61408392 | None:intergenic |
GCATTTGATGAGGATGACAG+TGG | 0.696947 | 4_2:+61408292 | Msa0612870:CDS |
CATCCTCATCAAATGCAAAG+GGG | 0.707305 | 4_2:-61408423 | None:intergenic |
GGTGCTGTACGGAAGACTGG+TGG | 0.712043 | 4_2:+61406064 | Msa0612870:CDS |
CAGCTCCGTAAAAGACAATG+GGG | 0.716546 | 4_2:-61406763 | None:intergenic |
ATCTTCCAAGATCACAACCG+GGG | 0.732579 | 4_2:-61401756 | None:intergenic |
TATCTTCCAAGACTACAACA+GGG | 0.759615 | 4_2:-61408117 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TCTTTTTATGTTTTTTTATT+AGG | - | chr4_2:61403010-61403029 | None:intergenic | 10.0% |
!!! | AAAATTTTGAATTTTGAATT+TGG | + | chr4_2:61404128-61404147 | Msa0612870:intron | 10.0% |
!!! | AAATTTTGAATTTTGAATTT+GGG | + | chr4_2:61404129-61404148 | Msa0612870:intron | 10.0% |
!!! | ATTTAATAATTTTCAATATC+AGG | - | chr4_2:61405705-61405724 | None:intergenic | 10.0% |
!! | TATTAAATTTCATAATTTGA+TGG | + | chr4_2:61405717-61405736 | Msa0612870:intron | 10.0% |
!!! | TAAAAAAAACATTTTATAAG+TGG | - | chr4_2:61406559-61406578 | None:intergenic | 10.0% |
!!! | TTGTTTAATAATTTTATTCT+CGG | + | chr4_2:61406856-61406875 | Msa0612870:intron | 10.0% |
!! | TTATCATTAAATAAATCAAA+TGG | - | chr4_2:61409748-61409767 | None:intergenic | 10.0% |
!! | AATGAACAAAAAAATTAAAA+GGG | - | chr4_2:61411005-61411024 | None:intergenic | 10.0% |
!! | AAAAAAAAAATTACAACTAT+TGG | - | chr4_2:61411422-61411441 | None:intergenic | 10.0% |
!! | AAAAGATAAATATTTACGTT+TGG | + | chr4_2:61403024-61403043 | Msa0612870:intron | 15.0% |
!!! | AAAGTTTGTTTTTTTTTTTG+AGG | + | chr4_2:61403128-61403147 | Msa0612870:intron | 15.0% |
!! | AAAAAAAGAAAAAGAAGAAT+GGG | - | chr4_2:61403431-61403450 | None:intergenic | 15.0% |
!! | AAAAAAAAGAAAAAGAAGAA+TGG | - | chr4_2:61403432-61403451 | None:intergenic | 15.0% |
!!! | GATTATTATGCTTTATTTAT+AGG | + | chr4_2:61404291-61404310 | Msa0612870:intron | 15.0% |
!!! | TTTACTAATGATAAGTTTTT+TGG | + | chr4_2:61404468-61404487 | Msa0612870:intron | 15.0% |
!!! | GATTGAAAATCTATTTTTTA+GGG | - | chr4_2:61404620-61404639 | None:intergenic | 15.0% |
!!! | TTTTTTTGAATGTTATGTTA+TGG | + | chr4_2:61406014-61406033 | Msa0612870:intron | 15.0% |
!!! | TTTTTTGAATGTTATGTTAT+GGG | + | chr4_2:61406015-61406034 | Msa0612870:intron | 15.0% |
!! | TAAAATTATTAAACAAGGAA+AGG | - | chr4_2:61406852-61406871 | None:intergenic | 15.0% |
!! | GAGAATAAAATTATTAAACA+AGG | - | chr4_2:61406857-61406876 | None:intergenic | 15.0% |
!! | ATCTAGAAAATAAAAGTTAT+TGG | - | chr4_2:61406945-61406964 | None:intergenic | 15.0% |
!!! | AGTTTTAAACATCAATATTT+CGG | + | chr4_2:61409811-61409830 | Msa0612870:intron | 15.0% |
!! | AAGAATTCTAACTAAAAAAT+TGG | - | chr4_2:61410260-61410279 | None:intergenic | 15.0% |
!! | AAAGCAAAAATTTAAACAAA+AGG | - | chr4_2:61410635-61410654 | None:intergenic | 15.0% |
!! | ATGAACAAAAAAATTAAAAG+GGG | - | chr4_2:61411004-61411023 | None:intergenic | 15.0% |
!! | GAATGAACAAAAAAATTAAA+AGG | - | chr4_2:61411006-61411025 | None:intergenic | 15.0% |
!! | ATACAAAAAAAATCAATAGT+AGG | + | chr4_2:61411364-61411383 | Msa0612870:three_prime_UTR | 15.0% |
!! | TGACGATTTAAATAAAAATG+AGG | + | chr4_2:61401964-61401983 | Msa0612870:intron | 20.0% |
!! | GTATGTGAATGTTTAAAAAT+GGG | + | chr4_2:61401986-61402005 | Msa0612870:intron | 20.0% |
!!! | AACTAGTGTTTTTTATCAAT+AGG | - | chr4_2:61402799-61402818 | None:intergenic | 20.0% |
!!! | TTAATAAGTAGTTTTGTAAC+TGG | + | chr4_2:61402824-61402843 | Msa0612870:intron | 20.0% |
!! | AAATCAAAAGCTGAAAATAA+CGG | + | chr4_2:61403225-61403244 | Msa0612870:intron | 20.0% |
!!! | TTAGTTTCTTTGTTTTAGAT+TGG | + | chr4_2:61404188-61404207 | Msa0612870:intron | 20.0% |
!!! | ATTATGCTTTATTTATAGGA+TGG | + | chr4_2:61404295-61404314 | Msa0612870:intron | 20.0% |
!! | ACTAGTTAAAATGTAGAAAA+GGG | - | chr4_2:61404390-61404409 | None:intergenic | 20.0% |
!!! | CGATTGAAAATCTATTTTTT+AGG | - | chr4_2:61404621-61404640 | None:intergenic | 20.0% |
!! | AAAGCAAAACTAATATTGTT+GGG | + | chr4_2:61404730-61404749 | Msa0612870:intron | 20.0% |
!! | AACAAATGGAAAAATAATTG+TGG | - | chr4_2:61404779-61404798 | None:intergenic | 20.0% |
!! | AAAAAATTATAACTTGGACA+CGG | - | chr4_2:61404902-61404921 | None:intergenic | 20.0% |
!! | ATTAGAAATTTAACACAACA+AGG | - | chr4_2:61405184-61405203 | None:intergenic | 20.0% |
!! | ATGATACAAGCAAAAAAAAA+AGG | - | chr4_2:61405517-61405536 | None:intergenic | 20.0% |
!!! | AATAATTTTCAATATCAGGA+TGG | - | chr4_2:61405701-61405720 | None:intergenic | 20.0% |
!! | TGTTAATTCTTAACTTATAG+AGG | + | chr4_2:61405749-61405768 | Msa0612870:intron | 20.0% |
!! | GTTAATTCTTAACTTATAGA+GGG | + | chr4_2:61405750-61405769 | Msa0612870:intron | 20.0% |
!!! | GTTTTAGATTAATTTATGTG+CGG | - | chr4_2:61405802-61405821 | None:intergenic | 20.0% |
!! | TAATTTGAATTATTTGCATG+TGG | - | chr4_2:61405868-61405887 | None:intergenic | 20.0% |
!!! | TTTTTGAATGTTATGTTATG+GGG | + | chr4_2:61406016-61406035 | Msa0612870:intron | 20.0% |
!!! | CAATTTTAAGGAAAAACTAA+GGG | + | chr4_2:61406087-61406106 | Msa0612870:CDS | 20.0% |
!!! | TTTTTCATTTCTCAAATCTT+TGG | - | chr4_2:61406441-61406460 | None:intergenic | 20.0% |
!!! | GATTTTATTAGCTTACTTTT+CGG | + | chr4_2:61406886-61406905 | Msa0612870:intron | 20.0% |
!!! | ATTGCTTCAATTGTTTTTTT+AGG | + | chr4_2:61407208-61407227 | Msa0612870:intron | 20.0% |
!! | AGACAATAAAATCAAATCAA+GGG | - | chr4_2:61407503-61407522 | None:intergenic | 20.0% |
!!! | AATCTGTGATTTTAATCTAA+TGG | - | chr4_2:61407569-61407588 | None:intergenic | 20.0% |
!!! | ATGACTATTTTAACTTTTAG+AGG | - | chr4_2:61407712-61407731 | None:intergenic | 20.0% |
!! | TCTAAAAGTTAAAATAGTCA+TGG | + | chr4_2:61407711-61407730 | Msa0612870:intron | 20.0% |
!!! | AACTCATTCTAAAAAACATA+AGG | + | chr4_2:61408492-61408511 | Msa0612870:CDS | 20.0% |
!! | ACATTAACATAAATGATACA+TGG | - | chr4_2:61408694-61408713 | None:intergenic | 20.0% |
!! | AATGTCTTCTCATAAAATTA+TGG | + | chr4_2:61408709-61408728 | Msa0612870:intron | 20.0% |
!!! | GAACTAATGATGTTTTTTTT+TGG | + | chr4_2:61409138-61409157 | Msa0612870:intron | 20.0% |
!! | ATCCATAACATATTAAGAAA+TGG | - | chr4_2:61409490-61409509 | None:intergenic | 20.0% |
!! | AGTCTCTATTTATCTTTATA+TGG | + | chr4_2:61409553-61409572 | Msa0612870:intron | 20.0% |
!!! | AAATCAAATGGATTAAGAAT+GGG | - | chr4_2:61409736-61409755 | None:intergenic | 20.0% |
!!! | TAAATCAAATGGATTAAGAA+TGG | - | chr4_2:61409737-61409756 | None:intergenic | 20.0% |
!! | ACATGATTAAAAAAAGGTTA+TGG | - | chr4_2:61409789-61409808 | None:intergenic | 20.0% |
!! | AACTGTACATGATTAAAAAA+AGG | - | chr4_2:61409795-61409814 | None:intergenic | 20.0% |
!! | TAAATCAAAGAGATTAAGAA+AGG | - | chr4_2:61409940-61409959 | None:intergenic | 20.0% |
!!! | ATTATTATGCTCTATTTTCT+TGG | + | chr4_2:61410166-61410185 | Msa0612870:CDS | 20.0% |
!! | ATAGAATTACTACTTTGATT+TGG | + | chr4_2:61410360-61410379 | Msa0612870:intron | 20.0% |
!! | ATAAGTAAACACAAGATTAA+GGG | - | chr4_2:61410485-61410504 | None:intergenic | 20.0% |
!! | AAAAAAAATCAATAGTAGGA+TGG | + | chr4_2:61411368-61411387 | Msa0612870:three_prime_UTR | 20.0% |
! | AAAGTGGAAAAAGATTTAGA+TGG | + | chr4_2:61401930-61401949 | Msa0612870:intron | 25.0% |
! | AAGTGGAAAAAGATTTAGAT+GGG | + | chr4_2:61401931-61401950 | Msa0612870:intron | 25.0% |
! | GGTATGTGAATGTTTAAAAA+TGG | + | chr4_2:61401985-61402004 | Msa0612870:intron | 25.0% |
!!! | TTGATTTGTAAAGCTAATGA+CGG | - | chr4_2:61402062-61402081 | None:intergenic | 25.0% |
! | TTTATGGGATTTATACCTAA+AGG | - | chr4_2:61402142-61402161 | None:intergenic | 25.0% |
! | AATCCCATAAACTTTAGATA+TGG | + | chr4_2:61402151-61402170 | Msa0612870:intron | 25.0% |
!! | GTACCATATCTAAAGTTTAT+GGG | - | chr4_2:61402157-61402176 | None:intergenic | 25.0% |
! | ATTGTTAACACTTCAAGATA+GGG | - | chr4_2:61402227-61402246 | None:intergenic | 25.0% |
! | AATTGTTAACACTTCAAGAT+AGG | - | chr4_2:61402228-61402247 | None:intergenic | 25.0% |
! | ATATCTTTCTTGAAACATCA+AGG | + | chr4_2:61402261-61402280 | Msa0612870:intron | 25.0% |
! | TATCTTTCTTGAAACATCAA+GGG | + | chr4_2:61402262-61402281 | Msa0612870:intron | 25.0% |
!!! | ACAATGTTTTGATGAAATAG+TGG | - | chr4_2:61402410-61402429 | None:intergenic | 25.0% |
! | AACCGACACTTAATTTAAAA+CGG | - | chr4_2:61402765-61402784 | None:intergenic | 25.0% |
! | TTTATCAATAGGAGAACAAA+AGG | - | chr4_2:61402788-61402807 | None:intergenic | 25.0% |
! | TTCACAAAAAAAACCCTTAT+TGG | + | chr4_2:61402941-61402960 | Msa0612870:intron | 25.0% |
! | AGATAAATATTTACGTTTGG+AGG | + | chr4_2:61403027-61403046 | Msa0612870:intron | 25.0% |
! | GCAGTAACTACTTAATAATA+TGG | - | chr4_2:61403185-61403204 | None:intergenic | 25.0% |
!! | TATGTTGATGAATTTCGATT+TGG | - | chr4_2:61403491-61403510 | None:intergenic | 25.0% |
!!! | ACAATAGTTGATGGAATTTT+GGG | + | chr4_2:61404323-61404342 | Msa0612870:CDS | 25.0% |
! | CACTAGTTAAAATGTAGAAA+AGG | - | chr4_2:61404391-61404410 | None:intergenic | 25.0% |
! | AAATGTAGAATCAAACAAGT+GGG | - | chr4_2:61404539-61404558 | None:intergenic | 25.0% |
! | TTGTTTGATTCTACATTTGA+AGG | + | chr4_2:61404541-61404560 | Msa0612870:intron | 25.0% |
! | AATATTTCAGTACCAAGATT+TGG | + | chr4_2:61404571-61404590 | Msa0612870:intron | 25.0% |
! | CAAAGCAAAACTAATATTGT+TGG | + | chr4_2:61404729-61404748 | Msa0612870:intron | 25.0% |
!!! | ATAATTGTGGACTGTAATTT+TGG | - | chr4_2:61404766-61404785 | None:intergenic | 25.0% |
!! | TTCCAATTTTGTCATTCAAA+TGG | - | chr4_2:61404814-61404833 | None:intergenic | 25.0% |
! | AGCATAGACAGTAAAAATAA+GGG | - | chr4_2:61405124-61405143 | None:intergenic | 25.0% |
! | AAGCATAGACAGTAAAAATA+AGG | - | chr4_2:61405125-61405144 | None:intergenic | 25.0% |
! | TACAATTAACTAGAACTTCT+TGG | - | chr4_2:61405357-61405376 | None:intergenic | 25.0% |
!! | AGTAAAGAGATTTTGTAATC+AGG | + | chr4_2:61405639-61405658 | Msa0612870:intron | 25.0% |
! | TTTCATAATTTGATGGAATC+TGG | + | chr4_2:61405724-61405743 | Msa0612870:intron | 25.0% |
! | ACATGTAAATTATGTTCTCT+TGG | + | chr4_2:61405833-61405852 | Msa0612870:intron | 25.0% |
! | TAACTGTACATATTATCCTA+TGG | + | chr4_2:61405954-61405973 | Msa0612870:intron | 25.0% |
!! | TTTTGAATGTTATGTTATGG+GGG | + | chr4_2:61406017-61406036 | Msa0612870:intron | 25.0% |
!!! | GCAATTTTAAGGAAAAACTA+AGG | + | chr4_2:61406086-61406105 | Msa0612870:CDS | 25.0% |
! | AATTGATACAGTCTATAACA+GGG | + | chr4_2:61406244-61406263 | Msa0612870:intron | 25.0% |
!! | AATTCTGAAAGACAAATTCA+TGG | - | chr4_2:61406394-61406413 | None:intergenic | 25.0% |
! | ATTTGTCTTTCAGAATTGTA+AGG | + | chr4_2:61406397-61406416 | Msa0612870:intron | 25.0% |
!! | GGTACTAGATTTTTATAAAC+TGG | + | chr4_2:61407073-61407092 | Msa0612870:intron | 25.0% |
! | ATAAAAGATTTGCAGTGATT+TGG | - | chr4_2:61407159-61407178 | None:intergenic | 25.0% |
!! | TCTTATCTTTTCTTCTAGAT+AGG | + | chr4_2:61407181-61407200 | Msa0612870:intron | 25.0% |
!!! | CTTCAATTGTTTTTTTAGGT+GGG | + | chr4_2:61407212-61407231 | Msa0612870:intron | 25.0% |
!!! | TGTTAATTCATTTTTACTCC+AGG | + | chr4_2:61407399-61407418 | Msa0612870:intron | 25.0% |
!!! | GTTAATTCATTTTTACTCCA+GGG | + | chr4_2:61407400-61407419 | Msa0612870:intron | 25.0% |
! | GAGACAATAAAATCAAATCA+AGG | - | chr4_2:61407504-61407523 | None:intergenic | 25.0% |
!!! | TTTGATTTTATTGTCTCTGT+TGG | + | chr4_2:61407507-61407526 | Msa0612870:intron | 25.0% |
! | AAATCACAGATTGTTTATTC+AGG | + | chr4_2:61407577-61407596 | Msa0612870:intron | 25.0% |
! | AATCACAGATTGTTTATTCA+GGG | + | chr4_2:61407578-61407597 | Msa0612870:intron | 25.0% |
! | TTAGCATAACCCAAATAATT+CGG | - | chr4_2:61407671-61407690 | None:intergenic | 25.0% |
!! | GCATACATAAAGTTTTTCTT+CGG | + | chr4_2:61407766-61407785 | Msa0612870:intron | 25.0% |
! | GTTAGAATTCTTAATAGAAG+AGG | - | chr4_2:61407879-61407898 | None:intergenic | 25.0% |
!! | ATTTTCTTTTATCTGAGCAA+AGG | - | chr4_2:61408963-61408982 | None:intergenic | 25.0% |
! | TTAAATTTGAACAGTTGTAC+AGG | + | chr4_2:61409229-61409248 | Msa0612870:intron | 25.0% |
! | CTCCATTTCTTAATATGTTA+TGG | + | chr4_2:61409485-61409504 | Msa0612870:intron | 25.0% |
! | GAAATATTGAAAGAAGTTCT+GGG | - | chr4_2:61409706-61409725 | None:intergenic | 25.0% |
! | TGAAATATTGAAAGAAGTTC+TGG | - | chr4_2:61409707-61409726 | None:intergenic | 25.0% |
! | ACAATACAATATAACGAGAT+AGG | - | chr4_2:61410027-61410046 | None:intergenic | 25.0% |
! | GGAAGATAAAAAATTTGAAC+TGG | + | chr4_2:61410220-61410239 | Msa0612870:CDS | 25.0% |
! | GTTACAAATATACTGCTTTA+AGG | - | chr4_2:61410404-61410423 | None:intergenic | 25.0% |
! | ATTAAGTGACATAAGCAAAT+CGG | - | chr4_2:61410435-61410454 | None:intergenic | 25.0% |
! | CATAAGTAAACACAAGATTA+AGG | - | chr4_2:61410486-61410505 | None:intergenic | 25.0% |
! | AGCAAATAATTTCATCAACA+TGG | - | chr4_2:61410818-61410837 | None:intergenic | 25.0% |
!!! | GAATTAAAAAGTGTTGTTGA+CGG | - | chr4_2:61411028-61411047 | None:intergenic | 25.0% |
CATATTATCCACCTTAACTT+GGG | - | chr4_2:61402087-61402106 | None:intergenic | 30.0% | |
TCATATTATCCACCTTAACT+TGG | - | chr4_2:61402088-61402107 | None:intergenic | 30.0% | |
TAAAGGAAAGAAGAGAAAAG+AGG | - | chr4_2:61402125-61402144 | None:intergenic | 30.0% | |
! | TCTTTTCTCTTCTTTCCTTT+AGG | + | chr4_2:61402124-61402143 | Msa0612870:intron | 30.0% |
! | GGTACCATATCTAAAGTTTA+TGG | - | chr4_2:61402158-61402177 | None:intergenic | 30.0% |
AGTGTTAACAATTAAACTCG+AGG | + | chr4_2:61402235-61402254 | Msa0612870:intron | 30.0% | |
! | TAGTTAGTGCTATTAAAACC+CGG | - | chr4_2:61402329-61402348 | None:intergenic | 30.0% |
AGAAACACAAGAGTAAATTG+CGG | - | chr4_2:61402614-61402633 | None:intergenic | 30.0% | |
TTTCCAACGAATGAATTGAA+TGG | - | chr4_2:61402637-61402656 | None:intergenic | 30.0% | |
TTAAAACGGAGGTAGTAAAA+TGG | - | chr4_2:61402751-61402770 | None:intergenic | 30.0% | |
!! | CTCCGTTTTAAATTAAGTGT+CGG | + | chr4_2:61402760-61402779 | Msa0612870:intron | 30.0% |
GAACTCACATATTTCAAATG+TGG | + | chr4_2:61402846-61402865 | Msa0612870:intron | 30.0% | |
CATGTGTACAAAACCAATAA+GGG | - | chr4_2:61402957-61402976 | None:intergenic | 30.0% | |
! | AAGAAGAATGGGAAATTTTC+AGG | - | chr4_2:61403420-61403439 | None:intergenic | 30.0% |
AAAAACGCATCCACAAAAAA+CGG | + | chr4_2:61403805-61403824 | Msa0612870:CDS | 30.0% | |
GATTGAATTCACTCTCATAT+AGG | + | chr4_2:61404231-61404250 | Msa0612870:intron | 30.0% | |
!!! | GACAATAGTTGATGGAATTT+TGG | + | chr4_2:61404322-61404341 | Msa0612870:CDS | 30.0% |
TTGTTTGTGAAAGAAATTCC+AGG | + | chr4_2:61404425-61404444 | Msa0612870:intron | 30.0% | |
CTACAGTATAACATTAATCC+TGG | - | chr4_2:61404446-61404465 | None:intergenic | 30.0% | |
AATGTAGAATCAAACAAGTG+GGG | - | chr4_2:61404538-61404557 | None:intergenic | 30.0% | |
CAAATGTAGAATCAAACAAG+TGG | - | chr4_2:61404540-61404559 | None:intergenic | 30.0% | |
AATCTACAAATGCCAAATCT+TGG | - | chr4_2:61404586-61404605 | None:intergenic | 30.0% | |
TGATTCTGAGTTGTAAAGAA+CGG | + | chr4_2:61404645-61404664 | Msa0612870:intron | 30.0% | |
GTCCATTTGAATGACAAAAT+TGG | + | chr4_2:61404809-61404828 | Msa0612870:intron | 30.0% | |
! | TTGATAGTTGTGGATACAAT+TGG | - | chr4_2:61405220-61405239 | None:intergenic | 30.0% |
TTCTTTACCATCAAGAGAAA+TGG | - | chr4_2:61405482-61405501 | None:intergenic | 30.0% | |
AAAAACAGCATTAGCATTAG+AGG | - | chr4_2:61405577-61405596 | None:intergenic | 30.0% | |
CATACTTCAATATTCTTCTG+TGG | + | chr4_2:61405925-61405944 | Msa0612870:intron | 30.0% | |
GAATTGATACAGTCTATAAC+AGG | + | chr4_2:61406243-61406262 | Msa0612870:intron | 30.0% | |
AAATACAAAAGAATTGGCGA+TGG | - | chr4_2:61406327-61406346 | None:intergenic | 30.0% | |
GGATGCAAATACAAAAGAAT+TGG | - | chr4_2:61406333-61406352 | None:intergenic | 30.0% | |
! | TAGCATTTTCCATTATCTTC+AGG | - | chr4_2:61406496-61406515 | None:intergenic | 30.0% |
! | TGATTTAATTTCCATTGCCT+TGG | + | chr4_2:61406579-61406598 | Msa0612870:intron | 30.0% |
! | TTTTTGATGCATTTGTAGCT+TGG | + | chr4_2:61406650-61406669 | Msa0612870:intron | 30.0% |
ATTGTCATTAAAATGCTCTC+AGG | + | chr4_2:61406792-61406811 | Msa0612870:CDS | 30.0% | |
!! | TTATTAGCTTACTTTTCGGT+TGG | + | chr4_2:61406890-61406909 | Msa0612870:intron | 30.0% |
!! | GTCATTAAGCTTGTTATCAA+CGG | - | chr4_2:61406999-61407018 | None:intergenic | 30.0% |
GATCAGTTAAGAGACTATAA+AGG | + | chr4_2:61407052-61407071 | Msa0612870:CDS | 30.0% | |
!!! | GCTTCAATTGTTTTTTTAGG+TGG | + | chr4_2:61407211-61407230 | Msa0612870:intron | 30.0% |
TTGCATGTTAATGAAAAGAC+AGG | - | chr4_2:61407255-61407274 | None:intergenic | 30.0% | |
ATTACTGAGGTATATGTACT+TGG | + | chr4_2:61407304-61407323 | Msa0612870:intron | 30.0% | |
AGTGAAAAAATAAACACGCA+TGG | + | chr4_2:61407339-61407358 | Msa0612870:intron | 30.0% | |
GTGAAAAAATAAACACGCAT+GGG | + | chr4_2:61407340-61407359 | Msa0612870:intron | 30.0% | |
TAGCATAACCCAAATAATTC+GGG | - | chr4_2:61407670-61407689 | None:intergenic | 30.0% | |
TCATTCTCTGCAAATTCAAA+TGG | - | chr4_2:61407809-61407828 | None:intergenic | 30.0% | |
!! | ATAGTTGGGTTTTATGAGAA+AGG | - | chr4_2:61407901-61407920 | None:intergenic | 30.0% |
ATACATACTCACTAAAGATG+AGG | + | chr4_2:61407984-61408003 | Msa0612870:CDS | 30.0% | |
! | ATTCTTCCTGGAACTATTTT+GGG | - | chr4_2:61408077-61408096 | None:intergenic | 30.0% |
! | ATTCTTCCTGGAACTATTTT+GGG | - | chr4_2:61408077-61408096 | None:intergenic | 30.0% |
CAATTAATTGACAGCCAATA+GGG | - | chr4_2:61408868-61408887 | None:intergenic | 30.0% | |
!! | GATTTTCTTGTTGCTATTCT+GGG | + | chr4_2:61409040-61409059 | Msa0612870:CDS | 30.0% |
!! | CAAGATTTTAGTGTTCTTTC+TGG | + | chr4_2:61409187-61409206 | Msa0612870:intron | 30.0% |
AAAGAAGTTAACAGAATGGT+TGG | - | chr4_2:61409354-61409373 | None:intergenic | 30.0% | |
TGACAAAGAAGTTAACAGAA+TGG | - | chr4_2:61409358-61409377 | None:intergenic | 30.0% | |
! | TTCTTGTTTCACACATTGTT+TGG | + | chr4_2:61410275-61410294 | Msa0612870:intron | 30.0% |
! | TCTTGTTTCACACATTGTTT+GGG | + | chr4_2:61410276-61410295 | Msa0612870:intron | 30.0% |
TTAAGTGACATAAGCAAATC+GGG | - | chr4_2:61410434-61410453 | None:intergenic | 30.0% | |
! | GATTTGCTTATGTCACTTAA+TGG | + | chr4_2:61410434-61410453 | Msa0612870:intron | 30.0% |
TTGCTTTGTCGCATATATTA+AGG | + | chr4_2:61410648-61410667 | Msa0612870:intron | 30.0% | |
TGCTTTGTCGCATATATTAA+GGG | + | chr4_2:61410649-61410668 | Msa0612870:intron | 30.0% | |
TCATTCGTAATATATATGCC+TGG | + | chr4_2:61410885-61410904 | Msa0612870:intron | 30.0% | |
TTTAATCATAATAGACGCCT+GGG | + | chr4_2:61410975-61410994 | Msa0612870:intron | 30.0% | |
!!! | CTTATTTTATATCACCATGC+TGG | + | chr4_2:61411323-61411342 | Msa0612870:three_prime_UTR | 30.0% |
TCATCCTCATCAAATGCAAA+TGG | - | chr4_2:61401791-61401810 | None:intergenic | 35.0% | |
ATTCTTCCTTGAACTGCTTA+GGG | - | chr4_2:61401855-61401874 | None:intergenic | 35.0% | |
GGAAAAAGATTTAGATGGGT+TGG | + | chr4_2:61401935-61401954 | Msa0612870:intron | 35.0% | |
ACAAATCAACACCCAAGTTA+AGG | + | chr4_2:61402073-61402092 | Msa0612870:intron | 35.0% | |
TGTTATGATGGTCCTGTTAT+GGG | - | chr4_2:61402196-61402215 | None:intergenic | 35.0% | |
ATGTTATGATGGTCCTGTTA+TGG | - | chr4_2:61402197-61402216 | None:intergenic | 35.0% | |
AGGGAGAAATCATGTTATGA+TGG | - | chr4_2:61402208-61402227 | None:intergenic | 35.0% | |
GTTAACAATTAAACTCGAGG+AGG | + | chr4_2:61402238-61402257 | Msa0612870:intron | 35.0% | |
AAGAGTAAATTGCGGTTGTA+CGG | - | chr4_2:61402606-61402625 | None:intergenic | 35.0% | |
TCTCCATTCAATTCATTCGT+TGG | + | chr4_2:61402631-61402650 | Msa0612870:intron | 35.0% | |
! | CGACACTTAATTTAAAACGG+AGG | - | chr4_2:61402762-61402781 | None:intergenic | 35.0% |
AAGTTGAGAGTGAGATGTTT+GGG | + | chr4_2:61402871-61402890 | Msa0612870:intron | 35.0% | |
GCATGTGTACAAAACCAATA+AGG | - | chr4_2:61402958-61402977 | None:intergenic | 35.0% | |
! | CAGTGTAGTGTTTTTCTAAC+TGG | - | chr4_2:61403282-61403301 | None:intergenic | 35.0% |
! | GTGTGCAATTTTGAATCTGT+GGG | - | chr4_2:61403306-61403325 | None:intergenic | 35.0% |
! | TGTGTGCAATTTTGAATCTG+TGG | - | chr4_2:61403307-61403326 | None:intergenic | 35.0% |
!!! | ATCATTTTGGAATCGGAGAT+CGG | - | chr4_2:61403550-61403569 | None:intergenic | 35.0% |
!!! | GCGAACAATCATTTTGGAAT+CGG | - | chr4_2:61403557-61403576 | None:intergenic | 35.0% |
! | GTATGTGCGAACAATCATTT+TGG | - | chr4_2:61403563-61403582 | None:intergenic | 35.0% |
TTGAGAAGAGAAAGCGAAAT+CGG | - | chr4_2:61403695-61403714 | None:intergenic | 35.0% | |
! | CAAAATCGTCGATTGAATTG+GGG | - | chr4_2:61403753-61403772 | None:intergenic | 35.0% |
! | CCAAAATCGTCGATTGAATT+GGG | - | chr4_2:61403754-61403773 | None:intergenic | 35.0% |
! | ACCAAAATCGTCGATTGAAT+TGG | - | chr4_2:61403755-61403774 | None:intergenic | 35.0% |
!!! | TCAATCGACGATTTTGGTTA+CGG | + | chr4_2:61403757-61403776 | Msa0612870:CDS | 35.0% |
!!! | ATACGAGAATCCGTTTTTTG+TGG | - | chr4_2:61403818-61403837 | None:intergenic | 35.0% |
! | AAAAAACGGATTCTCGTATC+CGG | + | chr4_2:61403819-61403838 | Msa0612870:CDS | 35.0% |
AGGTTAATTTCGCTCTTGAT+GGG | + | chr4_2:61403899-61403918 | Msa0612870:CDS | 35.0% | |
CATCAGCTAAACATTCATAC+TGG | - | chr4_2:61404264-61404283 | None:intergenic | 35.0% | |
ATGGCAAAGACAATAGTTGA+TGG | + | chr4_2:61404314-61404333 | Msa0612870:CDS | 35.0% | |
AGAACGGTGAAATTGATCTA+TGG | + | chr4_2:61404661-61404680 | Msa0612870:intron | 35.0% | |
GGACACTTATGGTAAACAAA+TGG | - | chr4_2:61404793-61404812 | None:intergenic | 35.0% | |
GTCATTCAAATGGACACTTA+TGG | - | chr4_2:61404804-61404823 | None:intergenic | 35.0% | |
!! | TTTCTGAAGTTATTGTCCAG+TGG | + | chr4_2:61405034-61405053 | Msa0612870:intron | 35.0% |
TAACACAACAAGGTGATTCA+AGG | - | chr4_2:61405174-61405193 | None:intergenic | 35.0% | |
! | TGCTTTGTCTTTGATAGTTG+TGG | - | chr4_2:61405230-61405249 | None:intergenic | 35.0% |
! | GACTCTAGAAAAAACTGCAA+CGG | - | chr4_2:61405335-61405354 | None:intergenic | 35.0% |
TCAGCAATGTTAACCACTTT+GGG | - | chr4_2:61405435-61405454 | None:intergenic | 35.0% | |
! | TTATCTGCCATTTCTCTTGA+TGG | + | chr4_2:61405472-61405491 | Msa0612870:CDS | 35.0% |
GAGGAATCAGATAACTAAGA+TGG | - | chr4_2:61405558-61405577 | None:intergenic | 35.0% | |
TACTTCTTCTCAGTTTCTGA+AGG | + | chr4_2:61405673-61405692 | Msa0612870:intron | 35.0% | |
GGATAATATGTACAGTTAGC+TGG | - | chr4_2:61405952-61405971 | None:intergenic | 35.0% | |
ATTCGATACAGAAGTTCCAT+AGG | - | chr4_2:61405973-61405992 | None:intergenic | 35.0% | |
GAATTGTCATTCAGATCTGA+AGG | + | chr4_2:61406147-61406166 | Msa0612870:CDS | 35.0% | |
ACACATCTCAAAGCAAGAAA+TGG | - | chr4_2:61406287-61406306 | None:intergenic | 35.0% | |
TCTTAAGTGCCTGAAGATAA+TGG | + | chr4_2:61406484-61406503 | Msa0612870:CDS | 35.0% | |
! | TTTTCTAAGCAAAGACAACC+AGG | + | chr4_2:61406517-61406536 | Msa0612870:CDS | 35.0% |
ACTCATTTGCTTGGAATGAA+AGG | + | chr4_2:61406720-61406739 | Msa0612870:CDS | 35.0% | |
TCTCAGGTAATGATCATACA+CGG | + | chr4_2:61406808-61406827 | Msa0612870:intron | 35.0% | |
GCTTAATGACCCTTTCTTTA+TGG | + | chr4_2:61407009-61407028 | Msa0612870:CDS | 35.0% | |
AATAAGCGCTATCACTCAAT+CGG | - | chr4_2:61407287-61407306 | None:intergenic | 35.0% | |
TATATGTACTTGGAAGAGGA+TGG | + | chr4_2:61407314-61407333 | Msa0612870:intron | 35.0% | |
ATATGTACTTGGAAGAGGAT+GGG | + | chr4_2:61407315-61407334 | Msa0612870:intron | 35.0% | |
AACGAAGAATATAAGAGGGA+AGG | + | chr4_2:61407473-61407492 | Msa0612870:intron | 35.0% | |
ACTTAGTCTCCCGAATTATT+TGG | + | chr4_2:61407658-61407677 | Msa0612870:intron | 35.0% | |
CTTAGTCTCCCGAATTATTT+GGG | + | chr4_2:61407659-61407678 | Msa0612870:intron | 35.0% | |
! | CTACTGGAACTAATGGATAT+AGG | - | chr4_2:61407833-61407852 | None:intergenic | 35.0% |
CTATATCCATTAGTTCCAGT+AGG | + | chr4_2:61407831-61407850 | Msa0612870:CDS | 35.0% | |
GTAATTCCTACTGGAACTAA+TGG | - | chr4_2:61407840-61407859 | None:intergenic | 35.0% | |
AGTTCCAGTAGGAATTACAA+TGG | + | chr4_2:61407842-61407861 | Msa0612870:CDS | 35.0% | |
! | CATTCTTCCTGGAACTATTT+TGG | - | chr4_2:61408078-61408097 | None:intergenic | 35.0% |
AAGAATGTTCCCTTTACTGA+AGG | + | chr4_2:61408091-61408110 | Msa0612870:CDS | 35.0% | |
TATCTTCCAAGACTACAACA+GGG | - | chr4_2:61408120-61408139 | None:intergenic | 35.0% | |
TCATCCTCATCAAATGCAAA+GGG | - | chr4_2:61401791-61401810 | None:intergenic | 35.0% | |
! | CATTCTTCCTGGAACTATTT+TGG | - | chr4_2:61408078-61408097 | None:intergenic | 35.0% |
TATCTTCCAAGATTACAACC+GGG | - | chr4_2:61408258-61408277 | None:intergenic | 35.0% | |
CTATCTTCCAAGATTACAAC+CGG | - | chr4_2:61408259-61408278 | None:intergenic | 35.0% | |
CATCAAATGCAAATGGATCT+TGG | - | chr4_2:61408282-61408301 | None:intergenic | 35.0% | |
AGATCCATTTGCATTTGATG+AGG | + | chr4_2:61408282-61408301 | Msa0612870:CDS | 35.0% | |
TCATCCTCATCAAATGCAAA+TGG | - | chr4_2:61401791-61401810 | None:intergenic | 35.0% | |
ATTCTTCCTCGAACTACTTA+GGG | - | chr4_2:61408353-61408372 | None:intergenic | 35.0% | |
GAGGAAGAATGTTCACTTTA+AGG | + | chr4_2:61408363-61408382 | Msa0612870:CDS | 35.0% | |
TATCTTCCAAGATTACAACC+GGG | - | chr4_2:61408258-61408277 | None:intergenic | 35.0% | |
CTATCTTCCAAGATTACAAC+CGG | - | chr4_2:61408259-61408278 | None:intergenic | 35.0% | |
TCATCCTCATCAAATGCAAA+GGG | - | chr4_2:61401791-61401810 | None:intergenic | 35.0% | |
ATCATCCTCATCAAATGCAA+AGG | - | chr4_2:61408428-61408447 | None:intergenic | 35.0% | |
!!! | TTTTTTGTTTCCCCGATAGT+AGG | - | chr4_2:61408471-61408490 | None:intergenic | 35.0% |
! | TGACTCTTCTTGACTCATTT+TGG | - | chr4_2:61408557-61408576 | None:intergenic | 35.0% |
GTCATAACTTATGTCAGAAC+TGG | - | chr4_2:61408602-61408621 | None:intergenic | 35.0% | |
AAAATACCTTGACAGCAGTA+AGG | - | chr4_2:61408654-61408673 | None:intergenic | 35.0% | |
ACACTAACATAGAACACTGA+AGG | - | chr4_2:61408773-61408792 | None:intergenic | 35.0% | |
!! | TAAATACCTGTGTTGCTTGT+AGG | + | chr4_2:61408817-61408836 | Msa0612870:intron | 35.0% |
GCAATTAATTGACAGCCAAT+AGG | - | chr4_2:61408869-61408888 | None:intergenic | 35.0% | |
GCTATGTCTATGTTAATTGC+TGG | + | chr4_2:61408908-61408927 | Msa0612870:CDS | 35.0% | |
TTTATCTGAGCAAAGGATGA+CGG | - | chr4_2:61408956-61408975 | None:intergenic | 35.0% | |
AAATCCCTTGAGAACTGAAA+AGG | + | chr4_2:61408979-61408998 | Msa0612870:CDS | 35.0% | |
AAAAGGACCATCTATGTGAT+AGG | + | chr4_2:61408996-61409015 | Msa0612870:CDS | 35.0% | |
TTAGATGCCTATCACATAGA+TGG | - | chr4_2:61409006-61409025 | None:intergenic | 35.0% | |
!! | GGATTTTCTTGTTGCTATTC+TGG | + | chr4_2:61409039-61409058 | Msa0612870:CDS | 35.0% |
GTCGTAACAGGTAATTTGAT+TGG | + | chr4_2:61409092-61409111 | Msa0612870:intron | 35.0% | |
!! | CAGGTAATTTGATTGGTTTC+TGG | + | chr4_2:61409099-61409118 | Msa0612870:intron | 35.0% |
!! | AATTTGATTGGTTTCTGGAC+TGG | + | chr4_2:61409104-61409123 | Msa0612870:intron | 35.0% |
! | TTAGTGTTCTTTCTGGTCTT+AGG | + | chr4_2:61409194-61409213 | Msa0612870:intron | 35.0% |
CTGTTTCAACTTTCAACCTT+CGG | + | chr4_2:61409517-61409536 | Msa0612870:intron | 35.0% | |
ACTTGATGAGAAATTTCCGA+AGG | - | chr4_2:61409536-61409555 | None:intergenic | 35.0% | |
! | AAGAGCATAATTCAGAAGCA+CGG | - | chr4_2:61409582-61409601 | None:intergenic | 35.0% |
TTGCAAGATTTCACCTTCTT+TGG | + | chr4_2:61409629-61409648 | Msa0612870:intron | 35.0% | |
!! | ACCTTCTTTGGCTCTTTAAT+AGG | + | chr4_2:61409641-61409660 | Msa0612870:intron | 35.0% |
ACCTATTAAAGAGCCAAAGA+AGG | - | chr4_2:61409645-61409664 | None:intergenic | 35.0% | |
!! | TTCTGGGATGTATAGCATTA+TGG | - | chr4_2:61409690-61409709 | None:intergenic | 35.0% |
TTCGAAATACTGAGAGTTCT+GGG | - | chr4_2:61409903-61409922 | None:intergenic | 35.0% | |
ATTCGAAATACTGAGAGTTC+TGG | - | chr4_2:61409904-61409923 | None:intergenic | 35.0% | |
TTCCCACTAAGCATAATCTT+TGG | + | chr4_2:61409991-61410010 | Msa0612870:intron | 35.0% | |
TGCCAAAGATTATGCTTAGT+GGG | - | chr4_2:61409996-61410015 | None:intergenic | 35.0% | |
ATGCCAAAGATTATGCTTAG+TGG | - | chr4_2:61409997-61410016 | None:intergenic | 35.0% | |
AAGAGTGACGAATCTTGAAT+GGG | - | chr4_2:61410060-61410079 | None:intergenic | 35.0% | |
! | TCTATTTTCTTGGCTAACCA+GGG | + | chr4_2:61410176-61410195 | Msa0612870:CDS | 35.0% |
!!! | GTATTCCTTTTTTGATGCGT+TGG | + | chr4_2:61410312-61410331 | Msa0612870:intron | 35.0% |
GCTCTTACTGTAGAACAAAA+GGG | - | chr4_2:61410685-61410704 | None:intergenic | 35.0% | |
TGCTCTTACTGTAGAACAAA+AGG | - | chr4_2:61410686-61410705 | None:intergenic | 35.0% | |
! | GATTTGTGGTAAGTAGCTTT+TGG | + | chr4_2:61410772-61410791 | Msa0612870:intron | 35.0% |
! | GATTTAAAACCGCATCTGAA+GGG | + | chr4_2:61410932-61410951 | Msa0612870:intron | 35.0% |
GGCGTCTATTATGATTAAAC+AGG | - | chr4_2:61410974-61410993 | None:intergenic | 35.0% | |
GTTTAATCATAATAGACGCC+TGG | + | chr4_2:61410974-61410993 | Msa0612870:intron | 35.0% | |
TTAATCATAATAGACGCCTG+GGG | + | chr4_2:61410976-61410995 | Msa0612870:intron | 35.0% | |
!! | CTAACAGTTTTATGAGTCTC+TGG | - | chr4_2:61411105-61411124 | None:intergenic | 35.0% |
TCATCGAGTCATGTAGAATA+CGG | + | chr4_2:61411130-61411149 | Msa0612870:CDS | 35.0% | |
GAATACGGTGAAAGATCAAA+TGG | + | chr4_2:61411145-61411164 | Msa0612870:exon | 35.0% | |
ACAAATCCTAAAGCAAGACA+TGG | - | chr4_2:61411185-61411204 | None:intergenic | 35.0% | |
TGAGAACGGCATATAAAAGT+TGG | - | chr4_2:61411292-61411311 | None:intergenic | 35.0% | |
! | AAGAGTATATGCGTTGAGAA+CGG | - | chr4_2:61411306-61411325 | None:intergenic | 35.0% |
TATCTTCCAAGATCACAACC+GGG | - | chr4_2:61401760-61401779 | None:intergenic | 40.0% | |
CTATCTTCCAAGATCACAAC+CGG | - | chr4_2:61401761-61401780 | None:intergenic | 40.0% | |
CATCAAATGCAAATGGATCC+TGG | - | chr4_2:61401784-61401803 | None:intergenic | 40.0% | |
GGATCCATTTGCATTTGATG+AGG | + | chr4_2:61401784-61401803 | Msa0612870:intron | 40.0% | |
CATTCTTCCTTGAACTGCTT+AGG | - | chr4_2:61401856-61401875 | None:intergenic | 40.0% | |
! | ACCATTTTGTTGCACGCTTA+TGG | + | chr4_2:61401882-61401901 | Msa0612870:intron | 40.0% |
! | CCATTTTGTTGCACGCTTAT+GGG | + | chr4_2:61401883-61401902 | Msa0612870:intron | 40.0% |
ATGGGTTTGGGTAAAAGGTT+TGG | + | chr4_2:61401901-61401920 | Msa0612870:intron | 40.0% | |
TGGGTTTGGGTAAAAGGTTT+GGG | + | chr4_2:61401902-61401921 | Msa0612870:intron | 40.0% | |
AAAGGTTTGGGTGTGAAAAG+TGG | + | chr4_2:61401914-61401933 | Msa0612870:intron | 40.0% | |
TGTGAACACTCCCTTTATTG+AGG | + | chr4_2:61402011-61402030 | Msa0612870:intron | 40.0% | |
GTGAACACTCCCTTTATTGA+GGG | + | chr4_2:61402012-61402031 | Msa0612870:intron | 40.0% | |
!! | ACGGTAAAGAAGCGTTTAAC+GGG | - | chr4_2:61402043-61402062 | None:intergenic | 40.0% |
!! | GACGGTAAAGAAGCGTTTAA+CGG | - | chr4_2:61402044-61402063 | None:intergenic | 40.0% |
AATCAACACCCAAGTTAAGG+TGG | + | chr4_2:61402076-61402095 | Msa0612870:intron | 40.0% | |
TTATGATGGTCCTGTTATGG+GGG | - | chr4_2:61402194-61402213 | None:intergenic | 40.0% | |
GTTATGATGGTCCTGTTATG+GGG | - | chr4_2:61402195-61402214 | None:intergenic | 40.0% | |
!! | ATTGTTTTATCCTCCTCCTC+CGG | + | chr4_2:61402307-61402326 | Msa0612870:intron | 40.0% |
! | TTAGTGCTATTAAAACCCGG+AGG | - | chr4_2:61402326-61402345 | None:intergenic | 40.0% |
TTATAGGTTGTTGTCGGGTT+GGG | - | chr4_2:61402485-61402504 | None:intergenic | 40.0% | |
TCTGCTTATAGGTTGTTGTC+GGG | - | chr4_2:61402490-61402509 | None:intergenic | 40.0% | |
GTCTGCTTATAGGTTGTTGT+CGG | - | chr4_2:61402491-61402510 | None:intergenic | 40.0% | |
CAACAACCTATAAGCAGACA+AGG | + | chr4_2:61402492-61402511 | Msa0612870:intron | 40.0% | |
TGCTTGTGCGGAAAGAATTT+AGG | + | chr4_2:61402515-61402534 | Msa0612870:intron | 40.0% | |
GCTTGTGCGGAAAGAATTTA+GGG | + | chr4_2:61402516-61402535 | Msa0612870:intron | 40.0% | |
TCATTGCCCACATTTCTCAT+GGG | - | chr4_2:61402542-61402561 | None:intergenic | 40.0% | |
ATCATTGCCCACATTTCTCA+TGG | - | chr4_2:61402543-61402562 | None:intergenic | 40.0% | |
ATGAGAAATGTGGGCAATGA+TGG | + | chr4_2:61402542-61402561 | Msa0612870:intron | 40.0% | |
GTGTTCTTGCATTTCTTCCT+TGG | - | chr4_2:61402702-61402721 | None:intergenic | 40.0% | |
! | CAAGTTGAGAGTGAGATGTT+TGG | + | chr4_2:61402870-61402889 | Msa0612870:intron | 40.0% |
AGTTGAGAGTGAGATGTTTG+GGG | + | chr4_2:61402872-61402891 | Msa0612870:intron | 40.0% | |
ACATACGATACGATACGATG+AGG | - | chr4_2:61403257-61403276 | None:intergenic | 40.0% | |
! | CGACAAGATGAGGACTTTTT+CGG | - | chr4_2:61403461-61403480 | None:intergenic | 40.0% |
!! | TGGCATTTTTCGACAAGATG+AGG | - | chr4_2:61403471-61403490 | None:intergenic | 40.0% |
! | TTCCGGAAATTGATGGTTTG+CGG | - | chr4_2:61403591-61403610 | None:intergenic | 40.0% |
GAATACGTTCCGGAAATTGA+TGG | - | chr4_2:61403598-61403617 | None:intergenic | 40.0% | |
TGAGAAGAGAAAGCGAAATC+GGG | - | chr4_2:61403694-61403713 | None:intergenic | 40.0% | |
! | CCCAATTCAATCGACGATTT+TGG | + | chr4_2:61403751-61403770 | Msa0612870:CDS | 40.0% |
!! | GATGATGGAGCAAAATGATG+AGG | + | chr4_2:61403879-61403898 | Msa0612870:CDS | 40.0% |
GAGGTTAATTTCGCTCTTGA+TGG | + | chr4_2:61403898-61403917 | Msa0612870:CDS | 40.0% | |
TTCGGAAAGGTCAACCAATT+CGG | + | chr4_2:61403923-61403942 | Msa0612870:CDS | 40.0% | |
TCAACCAATTCGGATCAGAA+GGG | + | chr4_2:61403933-61403952 | Msa0612870:CDS | 40.0% | |
TTCTTGTGTGTTGTGTCTCT+TGG | + | chr4_2:61404096-61404115 | Msa0612870:intron | 40.0% | |
TCTTGTGTGTTGTGTCTCTT+GGG | + | chr4_2:61404097-61404116 | Msa0612870:intron | 40.0% | |
! | GGAATTTTGAACTGAGTGCA+AGG | + | chr4_2:61404209-61404228 | Msa0612870:intron | 40.0% |
TCCTGTTCTGGTATTTGACT+TGG | + | chr4_2:61405065-61405084 | Msa0612870:intron | 40.0% | |
TCCAAGTCAAATACCAGAAC+AGG | - | chr4_2:61405069-61405088 | None:intergenic | 40.0% | |
! | ACTGTCTATGCTTTTGTCTC+AGG | + | chr4_2:61405132-61405151 | Msa0612870:intron | 40.0% |
! | CTGTCTATGCTTTTGTCTCA+GGG | + | chr4_2:61405133-61405152 | Msa0612870:intron | 40.0% |
! | AAAGACAAAGCACCAAGTCT+TGG | + | chr4_2:61405238-61405257 | Msa0612870:CDS | 40.0% |
AGAAAAAACTGCAACGGAAC+TGG | - | chr4_2:61405329-61405348 | None:intergenic | 40.0% | |
CAACGTGTCAGAATAACAGT+GGG | + | chr4_2:61405389-61405408 | Msa0612870:CDS | 40.0% | |
GTCAGCAATGTTAACCACTT+TGG | - | chr4_2:61405436-61405455 | None:intergenic | 40.0% | |
! | GTGGTTAACATTGCTGACTA+TGG | + | chr4_2:61405438-61405457 | Msa0612870:CDS | 40.0% |
! | AACATTGCTGACTATGGAGA+AGG | + | chr4_2:61405444-61405463 | Msa0612870:CDS | 40.0% |
TACTTGTGTACAGAAACCTC+TGG | + | chr4_2:61406043-61406062 | Msa0612870:intron | 40.0% | |
! | GAAGACTGGTGGCAATTTTA+AGG | + | chr4_2:61406075-61406094 | Msa0612870:CDS | 40.0% |
AAGGAAAAACTAAGGGAGCA+TGG | + | chr4_2:61406094-61406113 | Msa0612870:CDS | 40.0% | |
ACATGCAAAATCCAAGGCAA+TGG | - | chr4_2:61406593-61406612 | None:intergenic | 40.0% | |
AGTCACACATGCAAAATCCA+AGG | - | chr4_2:61406599-61406618 | None:intergenic | 40.0% | |
TCGTTACAGACTCATTTGCT+TGG | + | chr4_2:61406711-61406730 | Msa0612870:intron | 40.0% | |
GAAAGGAAAGTTGAGTCCTA+AGG | + | chr4_2:61406737-61406756 | Msa0612870:CDS | 40.0% | |
TCAGCTCCGTAAAAGACAAT+GGG | - | chr4_2:61406767-61406786 | None:intergenic | 40.0% | |
ATCAGCTCCGTAAAAGACAA+TGG | - | chr4_2:61406768-61406787 | None:intergenic | 40.0% | |
CTCAGGTAATGATCATACAC+GGG | + | chr4_2:61406809-61406828 | Msa0612870:intron | 40.0% | |
GATCATACACGGGTAATTTC+TGG | + | chr4_2:61406819-61406838 | Msa0612870:intron | 40.0% | |
TTCTAGATCTATGTCTGCGT+CGG | + | chr4_2:61406957-61406976 | Msa0612870:intron | 40.0% | |
! | AGTGATAGCGCTTATTACTG+AGG | + | chr4_2:61407291-61407310 | Msa0612870:intron | 40.0% |
GAGGTATATGTACTTGGAAG+AGG | + | chr4_2:61407310-61407329 | Msa0612870:intron | 40.0% | |
AAAATAAACACGCATGGGTG+AGG | + | chr4_2:61407345-61407364 | Msa0612870:intron | 40.0% | |
! | TTTTACTCCAGGGTGAATAC+TGG | + | chr4_2:61407410-61407429 | Msa0612870:intron | 40.0% |
TTTACTCCAGGGTGAATACT+GGG | + | chr4_2:61407411-61407430 | Msa0612870:intron | 40.0% | |
! | AATAGTGGGAGGTGGTAATT+TGG | + | chr4_2:61407443-61407462 | Msa0612870:intron | 40.0% |
AGGGGAACGAAGAATATAAG+AGG | + | chr4_2:61407468-61407487 | Msa0612870:intron | 40.0% | |
GGGGAACGAAGAATATAAGA+GGG | + | chr4_2:61407469-61407488 | Msa0612870:intron | 40.0% | |
CAGATTGTTTATTCAGGGTG+TGG | + | chr4_2:61407583-61407602 | Msa0612870:intron | 40.0% | |
CACACCATTGTAATTCCTAC+TGG | - | chr4_2:61407849-61407868 | None:intergenic | 40.0% | |
CAGTAGGAATTACAATGGTG+TGG | + | chr4_2:61407847-61407866 | Msa0612870:CDS | 40.0% | |
GAATTACAATGGTGTGGAGA+GGG | + | chr4_2:61407853-61407872 | Msa0612870:CDS | 40.0% | |
TCGGTTGGAAAAATCACTCT+CGG | + | chr4_2:61407931-61407950 | Msa0612870:CDS | 40.0% | |
! | GTATCAGTAGTTGATGTGCT+AGG | - | chr4_2:61407968-61407987 | None:intergenic | 40.0% |
AGGATCAATTCATCCACATC+TGG | + | chr4_2:61408004-61408023 | Msa0612870:CDS | 40.0% | |
AGTAAAGGGAACATTCTTCC+TGG | - | chr4_2:61408089-61408108 | None:intergenic | 40.0% | |
CTATCTTCCAAGACTACAAC+AGG | - | chr4_2:61408121-61408140 | None:intergenic | 40.0% | |
CATCAAATGCAAAGGGATCA+TGG | - | chr4_2:61408144-61408163 | None:intergenic | 40.0% | |
TGATCCCTTTGCATTTGATG+AGG | + | chr4_2:61408144-61408163 | Msa0612870:CDS | 40.0% | |
GTCATCCTCATCAAATGCAA+AGG | - | chr4_2:61401792-61401811 | None:intergenic | 40.0% | |
CTATGACCCAAAATAGTTCC+AGG | + | chr4_2:61408206-61408225 | Msa0612870:CDS | 40.0% | |
CGTAAACTGAACATTCTTCC+TGG | - | chr4_2:61408227-61408246 | None:intergenic | 40.0% | |
ATCTTCCAAGATTACAACCG+GGG | - | chr4_2:61408257-61408276 | None:intergenic | 40.0% | |
CATTCTTCCTCGAACTACTT+AGG | - | chr4_2:61408354-61408373 | None:intergenic | 40.0% | |
ATCTTCCAAGATTACAACCG+GGG | - | chr4_2:61408257-61408276 | None:intergenic | 40.0% | |
CATCCTCATCAAATGCAAAG+GGG | - | chr4_2:61408150-61408169 | None:intergenic | 40.0% | |
AGTCAAGAAGAGTCAAGTGA+TGG | + | chr4_2:61408562-61408581 | Msa0612870:CDS | 40.0% | |
GTCAAGAAGAGTCAAGTGAT+GGG | + | chr4_2:61408563-61408582 | Msa0612870:CDS | 40.0% | |
TAAGGAGGCAATCAGTTAGA+AGG | - | chr4_2:61408636-61408655 | None:intergenic | 40.0% | |
!! | CTGCTGTCAAGGTATTTTAC+TGG | + | chr4_2:61408656-61408675 | Msa0612870:intron | 40.0% |
TTGACTAACGACAACCCTAT+TGG | + | chr4_2:61408851-61408870 | Msa0612870:CDS | 40.0% | |
TGTCAATTAATTGCTGCCCA+TGG | + | chr4_2:61408875-61408894 | Msa0612870:CDS | 40.0% | |
AATTAATTGCTGCCCATGGA+GGG | + | chr4_2:61408879-61408898 | Msa0612870:CDS | 40.0% | |
! | TGGTCCTTTTCAGTTCTCAA+GGG | - | chr4_2:61408986-61409005 | None:intergenic | 40.0% |
! | ATGGTCCTTTTCAGTTCTCA+AGG | - | chr4_2:61408987-61409006 | None:intergenic | 40.0% |
CAACAAGAAAATCCAACTCG+TGG | - | chr4_2:61409033-61409052 | None:intergenic | 40.0% | |
GCTTGTAAATCTGGTTGAGA+AGG | + | chr4_2:61409066-61409085 | Msa0612870:CDS | 40.0% | |
GTAAATCTGGTTGAGAAGGA+TGG | + | chr4_2:61409070-61409089 | Msa0612870:CDS | 40.0% | |
CTGTTGTTCTTCACTTAGCA+TGG | + | chr4_2:61409328-61409347 | Msa0612870:intron | 40.0% | |
GAAGAGTGACGAATCTTGAA+TGG | - | chr4_2:61410061-61410080 | None:intergenic | 40.0% | |
TCACTCTTCTTTGCAGATCA+CGG | + | chr4_2:61410072-61410091 | Msa0612870:intron | 40.0% | |
TGAAGAAGGAAGTAGAACAC+TGG | - | chr4_2:61410108-61410127 | None:intergenic | 40.0% | |
GTTCTACTTCCTTCTTCAGA+AGG | + | chr4_2:61410110-61410129 | Msa0612870:CDS | 40.0% | |
! | CTCTATTTTCTTGGCTAACC+AGG | + | chr4_2:61410175-61410194 | Msa0612870:CDS | 40.0% |
!!! | TTCCTTTTTTGATGCGTTGG+TGG | + | chr4_2:61410315-61410334 | Msa0612870:intron | 40.0% |
!!! | TCCTTTTTTGATGCGTTGGT+GGG | + | chr4_2:61410316-61410335 | Msa0612870:intron | 40.0% |
TGCTGTTCTACAAGGAGAAA+AGG | + | chr4_2:61410520-61410539 | Msa0612870:CDS | 40.0% | |
GGAAGCTGAGAAAATGATTG+TGG | + | chr4_2:61410541-61410560 | Msa0612870:CDS | 40.0% | |
GCTTCTAGCATTTCTTTCCA+CGG | + | chr4_2:61410580-61410599 | Msa0612870:CDS | 40.0% | |
TAGCATTTCTTTCCACGGAA+AGG | + | chr4_2:61410585-61410604 | Msa0612870:CDS | 40.0% | |
ATAAGAAGTTCACCTTTCCG+TGG | - | chr4_2:61410600-61410619 | None:intergenic | 40.0% | |
!! | AGACTTGCTAAGTTGTGATC+TGG | - | chr4_2:61410735-61410754 | None:intergenic | 40.0% |
!! | CAGCATGCATTTGACTTGAA+CGG | + | chr4_2:61410850-61410869 | Msa0612870:intron | 40.0% |
! | GGATTTAAAACCGCATCTGA+AGG | + | chr4_2:61410931-61410950 | Msa0612870:intron | 40.0% |
TGAAGGGTCAAAAGTGAAGA+TGG | + | chr4_2:61410948-61410967 | Msa0612870:intron | 40.0% | |
AAAATTAAAAGGGGAACCCC+AGG | - | chr4_2:61410995-61411014 | None:intergenic | 40.0% | |
TTCCTGCACATAAAGACACA+CGG | - | chr4_2:61411055-61411074 | None:intergenic | 40.0% | |
GCAGGAATTTCATCTGTCTT+TGG | + | chr4_2:61411068-61411087 | Msa0612870:intron | 40.0% | |
!! | TTTAGGATTTGTTGCTACCC+AGG | + | chr4_2:61411193-61411212 | Msa0612870:three_prime_UTR | 40.0% |
!! | TTTAGGGTTTGTTGCTACTC+AGG | + | chr4_2:61411226-61411245 | Msa0612870:intron | 40.0% |
ATATCACCATGCTGGTGATA+CGG | + | chr4_2:61411331-61411350 | Msa0612870:three_prime_UTR | 40.0% | |
ATCTTCCAAGATCACAACCG+GGG | - | chr4_2:61401759-61401778 | None:intergenic | 45.0% | |
TGTGATCTTGGAAGATAGCC+AGG | + | chr4_2:61401763-61401782 | Msa0612870:five_prime_UTR | 45.0% | |
CCCATAAGCGTGCAACAAAA+TGG | - | chr4_2:61401886-61401905 | None:intergenic | 45.0% | |
TTGTTGCACGCTTATGGGTT+TGG | + | chr4_2:61401888-61401907 | Msa0612870:intron | 45.0% | |
TGTTGCACGCTTATGGGTTT+GGG | + | chr4_2:61401889-61401908 | Msa0612870:intron | 45.0% | |
CGCTTATGGGTTTGGGTAAA+AGG | + | chr4_2:61401896-61401915 | Msa0612870:intron | 45.0% | |
!! | GGTAAAGAAGCGTTTAACGG+GGG | - | chr4_2:61402041-61402060 | None:intergenic | 45.0% |
!! | CGGTAAAGAAGCGTTTAACG+GGG | - | chr4_2:61402042-61402061 | None:intergenic | 45.0% |
TATGATGGTCCTGTTATGGG+GGG | - | chr4_2:61402193-61402212 | None:intergenic | 45.0% | |
!! | TTGTTTTATCCTCCTCCTCC+GGG | + | chr4_2:61402308-61402327 | Msa0612870:intron | 45.0% |
CTTATAGGTTGTTGTCGGGT+TGG | - | chr4_2:61402486-61402505 | None:intergenic | 45.0% | |
CAAGCACCTTGTCTGCTTAT+AGG | - | chr4_2:61402501-61402520 | None:intergenic | 45.0% | |
! | TTTAGGGCCCATGAGAAATG+TGG | + | chr4_2:61402532-61402551 | Msa0612870:intron | 45.0% |
TTAGGGCCCATGAGAAATGT+GGG | + | chr4_2:61402533-61402552 | Msa0612870:intron | 45.0% | |
TCTTGCATTTCTTCCTTGGC+AGG | - | chr4_2:61402698-61402717 | None:intergenic | 45.0% | |
!!! | ATTTTGGAATCGGAGATCGG+TGG | - | chr4_2:61403547-61403566 | None:intergenic | 45.0% |
GGAAGAGGATGAATACGTTC+CGG | - | chr4_2:61403608-61403627 | None:intergenic | 45.0% | |
GTCTGATACGTCGTCGTTTA+GGG | - | chr4_2:61403629-61403648 | None:intergenic | 45.0% | |
AGTCTGATACGTCGTCGTTT+AGG | - | chr4_2:61403630-61403649 | None:intergenic | 45.0% | |
TTGGGATTGGGAAAGGGAAA+GGG | - | chr4_2:61403653-61403672 | None:intergenic | 45.0% | |
ATTGGGATTGGGAAAGGGAA+AGG | - | chr4_2:61403654-61403673 | None:intergenic | 45.0% | |
TTGGGATTGGGATTGGGAAA+GGG | - | chr4_2:61403659-61403678 | None:intergenic | 45.0% | |
GAGAAGAGAAAGCGAAATCG+GGG | - | chr4_2:61403693-61403712 | None:intergenic | 45.0% | |
CTCAAGATTCTTCCTCTCAG+TGG | + | chr4_2:61403710-61403729 | Msa0612870:CDS | 45.0% | |
ATCGAAGAAAGACCACTGAG+AGG | - | chr4_2:61403725-61403744 | None:intergenic | 45.0% | |
! | ATCGTCGATTGAATTGGGGT+CGG | - | chr4_2:61403749-61403768 | None:intergenic | 45.0% |
!!! | ATCGACGATTTTGGTTACGG+TGG | + | chr4_2:61403760-61403779 | Msa0612870:CDS | 45.0% |
!!! | ATTTTGGTTACGGTGGTCGA+CGG | + | chr4_2:61403767-61403786 | Msa0612870:CDS | 45.0% |
!!! | GATGCGTTTTTTGCCCTCTT+TGG | - | chr4_2:61403796-61403815 | None:intergenic | 45.0% |
!! | ATTTCGCTCTTGATGGGCTT+CGG | + | chr4_2:61403905-61403924 | Msa0612870:CDS | 45.0% |
GTCAACCAATTCGGATCAGA+AGG | + | chr4_2:61403932-61403951 | Msa0612870:CDS | 45.0% | |
! | AAGCCTTCTTTGCTGTGTTG+TGG | - | chr4_2:61403989-61404008 | None:intergenic | 45.0% |
AGAAGGCTTCTTCGTTCTCA+AGG | + | chr4_2:61404000-61404019 | Msa0612870:CDS | 45.0% | |
GAAGGCTTCTTCGTTCTCAA+GGG | + | chr4_2:61404001-61404020 | Msa0612870:CDS | 45.0% | |
CTTGTGTGTTGTGTCTCTTG+GGG | + | chr4_2:61404098-61404117 | Msa0612870:intron | 45.0% | |
GAACAGGAACTATATGCCAC+TGG | - | chr4_2:61405053-61405072 | None:intergenic | 45.0% | |
GTGGCATATAGTTCCTGTTC+TGG | + | chr4_2:61405053-61405072 | Msa0612870:intron | 45.0% | |
AGAAGTTTCGAGCCAAGACT+TGG | - | chr4_2:61405253-61405272 | None:intergenic | 45.0% | |
GCAACGTGTCAGAATAACAG+TGG | + | chr4_2:61405388-61405407 | Msa0612870:CDS | 45.0% | |
AACCACTTTGGGCATAACTC+TGG | - | chr4_2:61405424-61405443 | None:intergenic | 45.0% | |
! | GAAAAACTAAGGGAGCATGG+AGG | + | chr4_2:61406097-61406116 | Msa0612870:CDS | 45.0% |
!!! | ACAGGGAGAGCATTTTCTGA+TGG | + | chr4_2:61406261-61406280 | Msa0612870:intron | 45.0% |
GGCACTTAAGAAGCAAGGTT+AGG | - | chr4_2:61406475-61406494 | None:intergenic | 45.0% | |
CTTCAGGCACTTAAGAAGCA+AGG | - | chr4_2:61406480-61406499 | None:intergenic | 45.0% | |
CTAAGCAAAGACAACCAGGT+TGG | + | chr4_2:61406521-61406540 | Msa0612870:intron | 45.0% | |
GGTAAAGAAACATGCCAACC+TGG | - | chr4_2:61406538-61406557 | None:intergenic | 45.0% | |
AAAGACAATGGGGTTGCCTT+AGG | - | chr4_2:61406756-61406775 | None:intergenic | 45.0% | |
! | GGCAACCCCATTGTCTTTTA+CGG | + | chr4_2:61406758-61406777 | Msa0612870:CDS | 45.0% |
CAGCTCCGTAAAAGACAATG+GGG | - | chr4_2:61406766-61406785 | None:intergenic | 45.0% | |
!! | TACACGGGTAATTTCTGGCT+TGG | + | chr4_2:61406824-61406843 | Msa0612870:intron | 45.0% |
!! | AGCTTGTTATCAACGGACAC+AGG | - | chr4_2:61406992-61407011 | None:intergenic | 45.0% |
CATCGCTGGCCATAAAGAAA+GGG | - | chr4_2:61407021-61407040 | None:intergenic | 45.0% | |
TCATCGCTGGCCATAAAGAA+AGG | - | chr4_2:61407022-61407041 | None:intergenic | 45.0% | |
ATCCAGTTCAGAATCATCGC+TGG | - | chr4_2:61407035-61407054 | None:intergenic | 45.0% | |
AGACGTGCTAGAGTTCTATG+TGG | + | chr4_2:61407126-61407145 | Msa0612870:intron | 45.0% | |
TGGGAGGTGGTAATTTGGTT+AGG | + | chr4_2:61407448-61407467 | Msa0612870:intron | 45.0% | |
GGGAGGTGGTAATTTGGTTA+GGG | + | chr4_2:61407449-61407468 | Msa0612870:intron | 45.0% | |
GGAGGTGGTAATTTGGTTAG+GGG | + | chr4_2:61407450-61407469 | Msa0612870:intron | 45.0% | |
GGAATTACAATGGTGTGGAG+AGG | + | chr4_2:61407852-61407871 | Msa0612870:CDS | 45.0% | |
CCGAGCACATGTCAATAGTT+GGG | - | chr4_2:61407915-61407934 | None:intergenic | 45.0% | |
CCCAACTATTGACATGTGCT+CGG | + | chr4_2:61407912-61407931 | Msa0612870:CDS | 45.0% | |
ACCGAGCACATGTCAATAGT+TGG | - | chr4_2:61407916-61407935 | None:intergenic | 45.0% | |
ACTATTGACATGTGCTCGGT+TGG | + | chr4_2:61407916-61407935 | Msa0612870:CDS | 45.0% | |
ACTACTGCAAGAACCAGATG+TGG | - | chr4_2:61408020-61408039 | None:intergenic | 45.0% | |
ACAGGGACACCTTCAGTAAA+GGG | - | chr4_2:61408103-61408122 | None:intergenic | 45.0% | |
AACAGGGACACCTTCAGTAA+AGG | - | chr4_2:61408104-61408123 | None:intergenic | 45.0% | |
GCATTTGATGAGGATGACAG+TGG | + | chr4_2:61401794-61401813 | Msa0612870:intron | 45.0% | |
!! | TCAGTTTACGAGAAGTACCC+CGG | + | chr4_2:61408237-61408256 | Msa0612870:CDS | 45.0% |
AAGTACCCCGGTTGTAATCT+TGG | + | chr4_2:61408249-61408268 | Msa0612870:CDS | 45.0% | |
GCATTTGATGAGGATGACAG+TGG | + | chr4_2:61401794-61401813 | Msa0612870:intron | 45.0% | |
! | TCACTTTAAGGAACGTACCC+CGG | + | chr4_2:61408375-61408394 | Msa0612870:CDS | 45.0% |
CATCAAATGCAAAGGGGTCT+TGG | - | chr4_2:61408420-61408439 | None:intergenic | 45.0% | |
AGACCCCTTTGCATTTGATG+AGG | + | chr4_2:61408420-61408439 | Msa0612870:CDS | 45.0% | |
ATGATATTGCGCCCTCTAAG+TGG | + | chr4_2:61408443-61408462 | Msa0612870:CDS | 45.0% | |
TGATATTGCGCCCTCTAAGT+GGG | + | chr4_2:61408444-61408463 | Msa0612870:CDS | 45.0% | |
GATAGTAGGTCCCACTTAGA+GGG | - | chr4_2:61408457-61408476 | None:intergenic | 45.0% | |
CTCTAAGTGGGACCTACTAT+CGG | + | chr4_2:61408456-61408475 | Msa0612870:CDS | 45.0% | |
TCTAAGTGGGACCTACTATC+GGG | + | chr4_2:61408457-61408476 | Msa0612870:CDS | 45.0% | |
ATACCTTGACAGCAGTAAGG+AGG | - | chr4_2:61408651-61408670 | None:intergenic | 45.0% | |
CTGCAACTACACATGAAACG+TGG | - | chr4_2:61408750-61408769 | None:intergenic | 45.0% | |
TCAACACCTACAAGCAACAC+AGG | - | chr4_2:61408826-61408845 | None:intergenic | 45.0% | |
CAATTAATTGCTGCCCATGG+AGG | + | chr4_2:61408878-61408897 | Msa0612870:CDS | 45.0% | |
ATGACGGTGAGCTGAAAGAA+GGG | - | chr4_2:61408940-61408959 | None:intergenic | 45.0% | |
! | TCTGGGCTTGCTTGTAAATC+TGG | + | chr4_2:61409057-61409076 | Msa0612870:CDS | 45.0% |
TTGAGAAGGATGGTCGTAAC+AGG | + | chr4_2:61409080-61409099 | Msa0612870:CDS | 45.0% | |
TCTGTGTGTGTGTGTGTGAT+AGG | + | chr4_2:61409279-61409298 | Msa0612870:intron | 45.0% | |
CTGTGTGTGTGTGTGTGATA+GGG | + | chr4_2:61409280-61409299 | Msa0612870:intron | 45.0% | |
GATGCAAGAATCATGCAGCT+TGG | - | chr4_2:61409398-61409417 | None:intergenic | 45.0% | |
GATGTCGGTATAGCAGTAGT+GGG | - | chr4_2:61409881-61409900 | None:intergenic | 45.0% | |
!! | TACTGAGAGTTCTGGGATGT+CGG | - | chr4_2:61409896-61409915 | None:intergenic | 45.0% |
ACTTCCTTCTTCAGAAGGCT+TGG | + | chr4_2:61410115-61410134 | Msa0612870:CDS | 45.0% | |
TCCCACCAACGCATCAAAAA+AGG | - | chr4_2:61410320-61410339 | None:intergenic | 45.0% | |
GATTGTCAGCAATTGCTGCA+CGG | - | chr4_2:61410710-61410729 | None:intergenic | 45.0% | |
! | AGCAAGTCTTGTACCTGTGT+TGG | + | chr4_2:61410746-61410765 | Msa0612870:CDS | 45.0% |
ACCTGTGTTGGACAGATTTG+TGG | + | chr4_2:61410758-61410777 | Msa0612870:CDS | 45.0% | |
ACCACAAATCTGTCCAACAC+AGG | - | chr4_2:61410762-61410781 | None:intergenic | 45.0% | |
CGTTCAAGTCAAATGCATGC+TGG | - | chr4_2:61410852-61410871 | None:intergenic | 45.0% | |
ATGCCTGGAAGTCACAATTG+CGG | + | chr4_2:61410900-61410919 | Msa0612870:intron | 45.0% | |
! | CACTTTTGACCCTTCAGATG+CGG | - | chr4_2:61410944-61410963 | None:intergenic | 45.0% |
AACCGTGTGTCTTTATGTGC+AGG | + | chr4_2:61411050-61411069 | Msa0612870:intron | 45.0% | |
GTACAGCCATGTCTTGCTTT+AGG | + | chr4_2:61411176-61411195 | Msa0612870:three_prime_UTR | 45.0% | |
!! | TATAATAAAAAATTATAACT+TGG | - | chr4_2:61404908-61404927 | None:intergenic | 5.0% |
!!! | TTAAAAAGTTATTATTATTT+TGG | + | chr4_2:61404937-61404956 | Msa0612870:intron | 5.0% |
!! | AAATAAAAAAACATTATTTA+AGG | - | chr4_2:61406354-61406373 | None:intergenic | 5.0% |
!! | TCAGCTTACGGAAAGTACCC+CGG | + | chr4_2:61401739-61401758 | Msa0612870:five_prime_UTR | 50.0% |
AAGTACCCCGGTTGTGATCT+TGG | + | chr4_2:61401751-61401770 | Msa0612870:five_prime_UTR | 50.0% | |
TATGGGGGGATAGGAACACT+TGG | - | chr4_2:61402179-61402198 | None:intergenic | 50.0% | |
TGTTCCTATCCCCCCATAAC+AGG | + | chr4_2:61402181-61402200 | Msa0612870:intron | 50.0% | |
CTATTAAAACCCGGAGGAGG+AGG | - | chr4_2:61402320-61402339 | None:intergenic | 50.0% | |
! | GTGCTATTAAAACCCGGAGG+AGG | - | chr4_2:61402323-61402342 | None:intergenic | 50.0% |
!! | TCGGGTTGGGATAATGCAGT+CGG | - | chr4_2:61402472-61402491 | None:intergenic | 50.0% |
! | AAGCAGACAAGGTGCTTGTG+CGG | + | chr4_2:61402503-61402522 | Msa0612870:intron | 50.0% |
! | CATTTGTTACGAGCCTGCCA+AGG | + | chr4_2:61402682-61402701 | Msa0612870:intron | 50.0% |
AATCGGAGATCGGTGGTTGA+CGG | - | chr4_2:61403540-61403559 | None:intergenic | 50.0% | |
CGCCGCAAACCATCAATTTC+CGG | + | chr4_2:61403586-61403605 | Msa0612870:CDS | 50.0% | |
TACGTCGTCGTTTAGGGAAG+AGG | - | chr4_2:61403623-61403642 | None:intergenic | 50.0% | |
CTTGGGATTGGGATTGGGAA+AGG | - | chr4_2:61403660-61403679 | None:intergenic | 50.0% | |
TGGGTCTTGGGATTGGGATT+GGG | - | chr4_2:61403665-61403684 | None:intergenic | 50.0% | |
GTAGAGTGGGTCTTGGGATT+GGG | - | chr4_2:61403671-61403690 | None:intergenic | 50.0% | |
AAGCGAAATCGGGGTAGAGT+GGG | - | chr4_2:61403684-61403703 | None:intergenic | 50.0% | |
AAAGCGAAATCGGGGTAGAG+TGG | - | chr4_2:61403685-61403704 | None:intergenic | 50.0% | |
!! | TTTTGGTTACGGTGGTCGAC+GGG | + | chr4_2:61403768-61403787 | Msa0612870:CDS | 50.0% |
CTAGCCCTTCTGATCCGAAT+TGG | - | chr4_2:61403940-61403959 | None:intergenic | 50.0% | |
!! | TCGGATCAGAAGGGCTAGTT+TGG | + | chr4_2:61403942-61403961 | Msa0612870:CDS | 50.0% |
GTGCCACAACACAGCAAAGA+AGG | + | chr4_2:61403983-61404002 | Msa0612870:CDS | 50.0% | |
GTAGCAGCTGCAAGATTGCT+GGG | - | chr4_2:61404368-61404387 | None:intergenic | 50.0% | |
GACCAGAGTTATGCCCAAAG+TGG | + | chr4_2:61405419-61405438 | Msa0612870:CDS | 50.0% | |
!! | CAGAAACCTCTGGTGCTGTA+CGG | + | chr4_2:61406053-61406072 | Msa0612870:intron | 50.0% |
GTTATCAACGGACACAGGAG+AGG | - | chr4_2:61406987-61407006 | None:intergenic | 50.0% | |
!! | CCTGGAACTATTTTGGGTCG+TGG | - | chr4_2:61408071-61408090 | None:intergenic | 50.0% |
CCACGACCCAAAATAGTTCC+AGG | + | chr4_2:61408068-61408087 | Msa0612870:CDS | 50.0% | |
AGGTGTCCCTGTTGTAGTCT+TGG | + | chr4_2:61408111-61408130 | Msa0612870:CDS | 50.0% | |
ACGTACCCCGGTTGTAATCT+TGG | + | chr4_2:61408387-61408406 | Msa0612870:CDS | 50.0% | |
CGATAGTAGGTCCCACTTAG+AGG | - | chr4_2:61408458-61408477 | None:intergenic | 50.0% | |
CTAAGTGGGACCTACTATCG+GGG | + | chr4_2:61408458-61408477 | Msa0612870:CDS | 50.0% | |
GAGGCAATCAGTTAGAAGGC+TGG | - | chr4_2:61408632-61408651 | None:intergenic | 50.0% | |
TTGCCTCCTTACTGCTGTCA+AGG | + | chr4_2:61408645-61408664 | Msa0612870:CDS | 50.0% | |
! | GATGACGGTGAGCTGAAAGA+AGG | - | chr4_2:61408941-61408960 | None:intergenic | 50.0% |
GCATCTAACTGACCACGAGT+TGG | + | chr4_2:61409018-61409037 | Msa0612870:CDS | 50.0% | |
ACACACACACAGAGTCACGT+AGG | - | chr4_2:61409272-61409291 | None:intergenic | 50.0% | |
ATGCAGCTTGGAGAGAGAGA+GGG | - | chr4_2:61409386-61409405 | None:intergenic | 50.0% | |
! | ACACACACAGACTGGTCAAG+GGG | - | chr4_2:61409435-61409454 | None:intergenic | 50.0% |
! | CACACACACAGACTGGTCAA+GGG | - | chr4_2:61409436-61409455 | None:intergenic | 50.0% |
! | ACACACACACAGACTGGTCA+AGG | - | chr4_2:61409437-61409456 | None:intergenic | 50.0% |
ACACACACACACACACAGAC+TGG | - | chr4_2:61409443-61409462 | None:intergenic | 50.0% | |
GGATGTCGGTATAGCAGTAG+TGG | - | chr4_2:61409882-61409901 | None:intergenic | 50.0% | |
! | TGGTCCAAGCCTTCTGAAGA+AGG | - | chr4_2:61410122-61410141 | None:intergenic | 50.0% |
TTCTTCAGAAGGCTTGGACC+AGG | + | chr4_2:61410121-61410140 | Msa0612870:CDS | 50.0% | |
TAACCAGGGTGAAAGTGAGG+CGG | + | chr4_2:61410190-61410209 | Msa0612870:CDS | 50.0% | |
TGGGAAGCTTGGAGTAGCAA+GGG | + | chr4_2:61410335-61410354 | Msa0612870:intron | 50.0% | |
GATCCTGCTGCTGTTCTACA+AGG | + | chr4_2:61410512-61410531 | Msa0612870:CDS | 50.0% | |
TCTCCTTGTAGAACAGCAGC+AGG | - | chr4_2:61410518-61410537 | None:intergenic | 50.0% | |
TGCCTGGAAGTCACAATTGC+GGG | + | chr4_2:61410901-61410920 | Msa0612870:intron | 50.0% | |
GGTTGCACACAGACTATGCT+AGG | - | chr4_2:61411401-61411420 | None:intergenic | 50.0% | |
CCTTGAACTGCTTAGGGACG+TGG | - | chr4_2:61401849-61401868 | None:intergenic | 55.0% | |
CCACGTCCCTAAGCAGTTCA+AGG | + | chr4_2:61401846-61401865 | Msa0612870:intron | 55.0% | |
CGGGGGCAACCCTCAATAAA+GGG | - | chr4_2:61402024-61402043 | None:intergenic | 55.0% | |
ACGGGGGCAACCCTCAATAA+AGG | - | chr4_2:61402025-61402044 | None:intergenic | 55.0% | |
TGGTCCTGTTATGGGGGGAT+AGG | - | chr4_2:61402188-61402207 | None:intergenic | 55.0% | |
GTGGGCAATGATGGCACTCA+TGG | + | chr4_2:61402551-61402570 | Msa0612870:intron | 55.0% | |
!! | GTTTGTGTGGTGGTTGGTGG+CGG | - | chr4_2:61403515-61403534 | None:intergenic | 55.0% |
! | GTGGTTTGTGTGGTGGTTGG+TGG | - | chr4_2:61403518-61403537 | None:intergenic | 55.0% |
! | ACGGTGGTTTGTGTGGTGGT+TGG | - | chr4_2:61403521-61403540 | None:intergenic | 55.0% |
! | GTTGACGGTGGTTTGTGTGG+TGG | - | chr4_2:61403525-61403544 | None:intergenic | 55.0% |
! | GTGGTTGACGGTGGTTTGTG+TGG | - | chr4_2:61403528-61403547 | None:intergenic | 55.0% |
GTGGGTCTTGGGATTGGGAT+TGG | - | chr4_2:61403666-61403685 | None:intergenic | 55.0% | |
GGTAGAGTGGGTCTTGGGAT+TGG | - | chr4_2:61403672-61403691 | None:intergenic | 55.0% | |
ATCGGGGTAGAGTGGGTCTT+GGG | - | chr4_2:61403677-61403696 | None:intergenic | 55.0% | |
AATCGGGGTAGAGTGGGTCT+TGG | - | chr4_2:61403678-61403697 | None:intergenic | 55.0% | |
! | TTGATGGAGGCGCAGGAGTT+TGG | + | chr4_2:61403853-61403872 | Msa0612870:CDS | 55.0% |
GCAGGAGTTTGGCGAGATGA+TGG | + | chr4_2:61403864-61403883 | Msa0612870:CDS | 55.0% | |
!! | GCTCTTGATGGGCTTCGGAA+AGG | + | chr4_2:61403910-61403929 | Msa0612870:CDS | 55.0% |
GGTAGCAGCTGCAAGATTGC+TGG | - | chr4_2:61404369-61404388 | None:intergenic | 55.0% | |
AGTCTTCCGTACAGCACCAG+AGG | - | chr4_2:61406062-61406081 | None:intergenic | 55.0% | |
!! | TCTGGTGCTGTACGGAAGAC+TGG | + | chr4_2:61406061-61406080 | Msa0612870:CDS | 55.0% |
GGCCAGCGATGATTCTGAAC+TGG | + | chr4_2:61407030-61407049 | Msa0612870:CDS | 55.0% | |
!! | ACTGGGCTGGCAAGGAATAG+TGG | + | chr4_2:61407428-61407447 | Msa0612870:intron | 55.0% |
!! | CTGGGCTGGCAAGGAATAGT+GGG | + | chr4_2:61407429-61407448 | Msa0612870:intron | 55.0% |
! | TGGCAAGGAATAGTGGGAGG+TGG | + | chr4_2:61407435-61407454 | Msa0612870:intron | 55.0% |
CCTCGAACTACTTAGGGACG+TGG | - | chr4_2:61408347-61408366 | None:intergenic | 55.0% | |
CCACGTCCCTAAGTAGTTCG+AGG | + | chr4_2:61408344-61408363 | Msa0612870:CDS | 55.0% | |
AATTGCTGCCCATGGAGGGT+TGG | + | chr4_2:61408883-61408902 | Msa0612870:CDS | 55.0% | |
CATAGCCTCCAACCCTCCAT+GGG | - | chr4_2:61408894-61408913 | None:intergenic | 55.0% | |
ACATAGCCTCCAACCCTCCA+TGG | - | chr4_2:61408895-61408914 | None:intergenic | 55.0% | |
CATGCAGCTTGGAGAGAGAG+AGG | - | chr4_2:61409387-61409406 | None:intergenic | 55.0% | |
! | ACACACAGACTGGTCAAGGG+GGG | - | chr4_2:61409433-61409452 | None:intergenic | 55.0% |
! | CACACACAGACTGGTCAAGG+GGG | - | chr4_2:61409434-61409453 | None:intergenic | 55.0% |
TTCAGAAGGCTTGGACCAGG+AGG | + | chr4_2:61410124-61410143 | Msa0612870:CDS | 55.0% | |
AAGGCTTGGACCAGGAGGTT+CGG | + | chr4_2:61410129-61410148 | Msa0612870:CDS | 55.0% | |
GGCTAACCAGGGTGAAAGTG+AGG | + | chr4_2:61410187-61410206 | Msa0612870:CDS | 55.0% | |
AACCAGGGTGAAAGTGAGGC+GGG | + | chr4_2:61410191-61410210 | Msa0612870:CDS | 55.0% | |
! | TGATGCGTTGGTGGGAAGCT+TGG | + | chr4_2:61410324-61410343 | Msa0612870:intron | 55.0% |
GTGGGAAGCTTGGAGTAGCA+AGG | + | chr4_2:61410334-61410353 | Msa0612870:intron | 55.0% | |
GGGAAGCTTGGAGTAGCAAG+GGG | + | chr4_2:61410336-61410355 | Msa0612870:intron | 55.0% | |
TGCCCGCAATTGTGACTTCC+AGG | - | chr4_2:61410906-61410925 | None:intergenic | 55.0% | |
GGAAGTCACAATTGCGGGCA+TGG | + | chr4_2:61410906-61410925 | Msa0612870:intron | 55.0% | |
AGTCACAATTGCGGGCATGG+TGG | + | chr4_2:61410909-61410928 | Msa0612870:intron | 55.0% | |
GTCACAATTGCGGGCATGGT+GGG | + | chr4_2:61410910-61410929 | Msa0612870:intron | 55.0% | |
ACCCAGGCACGTCTTGCTTT+AGG | + | chr4_2:61411209-61411228 | Msa0612870:intron | 55.0% | |
CCCTAAAGCAAGACGTGCCT+GGG | - | chr4_2:61411213-61411232 | None:intergenic | 55.0% | |
CCCAGGCACGTCTTGCTTTA+GGG | + | chr4_2:61411210-61411229 | Msa0612870:intron | 55.0% | |
ACCCTAAAGCAAGACGTGCC+TGG | - | chr4_2:61411214-61411233 | None:intergenic | 55.0% | |
GCATCTCCGTATCACCAGCA+TGG | - | chr4_2:61411340-61411359 | None:intergenic | 55.0% | |
TGGTCGACGGGAGCCAAAGA+GGG | + | chr4_2:61403780-61403799 | Msa0612870:CDS | 60.0% | |
TCCATCAACGTCGACGTCGC+CGG | - | chr4_2:61403841-61403860 | None:intergenic | 60.0% | |
! | GGTGCTGTACGGAAGACTGG+TGG | + | chr4_2:61406064-61406083 | Msa0612870:CDS | 60.0% |
CTCCAGGGTGAATACTGGGC+TGG | + | chr4_2:61407415-61407434 | Msa0612870:intron | 60.0% | |
TGCCAGCCCAGTATTCACCC+TGG | - | chr4_2:61407420-61407439 | None:intergenic | 60.0% | |
!! | GGGTGAATACTGGGCTGGCA+AGG | + | chr4_2:61407420-61407439 | Msa0612870:intron | 60.0% |
! | GGCTGGCAAGGAATAGTGGG+AGG | + | chr4_2:61407432-61407451 | Msa0612870:intron | 60.0% |
TCAAGGGGGGATTGGAGGGA+AGG | - | chr4_2:61409420-61409439 | None:intergenic | 60.0% | |
CTGGTCAAGGGGGGATTGGA+GGG | - | chr4_2:61409424-61409443 | None:intergenic | 60.0% | |
ACTGGTCAAGGGGGGATTGG+AGG | - | chr4_2:61409425-61409444 | None:intergenic | 60.0% | |
! | CAGACTGGTCAAGGGGGGAT+TGG | - | chr4_2:61409428-61409447 | None:intergenic | 60.0% |
TAACATCCCGCCGAACCTCC+TGG | - | chr4_2:61410142-61410161 | None:intergenic | 60.0% | |
GTGAAAGTGAGGCGGGAGCT+GGG | + | chr4_2:61410198-61410217 | Msa0612870:CDS | 60.0% | |
TGAAAGTGAGGCGGGAGCTG+GGG | + | chr4_2:61410199-61410218 | Msa0612870:CDS | 60.0% | |
CGGAGATCGGTGGTTGACGG+TGG | - | chr4_2:61403537-61403556 | None:intergenic | 65.0% | |
GTGGTCGACGGGAGCCAAAG+AGG | + | chr4_2:61403779-61403798 | Msa0612870:CDS | 65.0% | |
TCCGGCGACGTCGACGTTGA+TGG | + | chr4_2:61403837-61403856 | Msa0612870:CDS | 65.0% | |
! | GGCGACGTCGACGTTGATGG+AGG | + | chr4_2:61403840-61403859 | Msa0612870:CDS | 65.0% |
! | GTCGACGTTGATGGAGGCGC+AGG | + | chr4_2:61403846-61403865 | Msa0612870:CDS | 65.0% |
TGCTGCCCATGGAGGGTTGG+AGG | + | chr4_2:61408886-61408905 | Msa0612870:CDS | 65.0% | |
GCTTGGACCAGGAGGTTCGG+CGG | + | chr4_2:61410132-61410151 | Msa0612870:CDS | 65.0% | |
CTTGGACCAGGAGGTTCGGC+GGG | + | chr4_2:61410133-61410152 | Msa0612870:CDS | 65.0% | |
CTCCCGCCTCACTTTCACCC+TGG | - | chr4_2:61410196-61410215 | None:intergenic | 65.0% | |
GGTGAAAGTGAGGCGGGAGC+TGG | + | chr4_2:61410197-61410216 | Msa0612870:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 61401728 | 61411513 | 61401728 | ID=Msa0612870;Name=Msa0612870 |
chr4_2 | mRNA | 61401728 | 61411513 | 61401728 | ID=Msa0612870-mRNA-1;Parent=Msa0612870;Name=Msa0612870-mRNA-1;_AED=0.04;_eAED=0.04;_QI=341|1|1|1|0.85|0.73|15|325|956 |
chr4_2 | exon | 61401728 | 61401790 | 61401728 | ID=Msa0612870-mRNA-1:exon:16703;Parent=Msa0612870-mRNA-1 |
chr4_2 | exon | 61403287 | 61404022 | 61403287 | ID=Msa0612870-mRNA-1:exon:16704;Parent=Msa0612870-mRNA-1 |
chr4_2 | exon | 61404313 | 61404412 | 61404313 | ID=Msa0612870-mRNA-1:exon:16705;Parent=Msa0612870-mRNA-1 |
chr4_2 | exon | 61405154 | 61405493 | 61405154 | ID=Msa0612870-mRNA-1:exon:16706;Parent=Msa0612870-mRNA-1 |
chr4_2 | exon | 61406056 | 61406168 | 61406056 | ID=Msa0612870-mRNA-1:exon:16707;Parent=Msa0612870-mRNA-1 |
chr4_2 | exon | 61406410 | 61406538 | 61406410 | ID=Msa0612870-mRNA-1:exon:16708;Parent=Msa0612870-mRNA-1 |
chr4_2 | exon | 61406720 | 61406813 | 61406720 | ID=Msa0612870-mRNA-1:exon:16709;Parent=Msa0612870-mRNA-1 |
chr4_2 | exon | 61406963 | 61407073 | 61406963 | ID=Msa0612870-mRNA-1:exon:16710;Parent=Msa0612870-mRNA-1 |
chr4_2 | exon | 61407822 | 61408666 | 61407822 | ID=Msa0612870-mRNA-1:exon:16711;Parent=Msa0612870-mRNA-1 |
chr4_2 | exon | 61408839 | 61409101 | 61408839 | ID=Msa0612870-mRNA-1:exon:16712;Parent=Msa0612870-mRNA-1 |
chr4_2 | exon | 61410088 | 61410241 | 61410088 | ID=Msa0612870-mRNA-1:exon:16713;Parent=Msa0612870-mRNA-1 |
chr4_2 | exon | 61410509 | 61410606 | 61410509 | ID=Msa0612870-mRNA-1:exon:16714;Parent=Msa0612870-mRNA-1 |
chr4_2 | exon | 61410698 | 61410779 | 61410698 | ID=Msa0612870-mRNA-1:exon:16715;Parent=Msa0612870-mRNA-1 |
chr4_2 | exon | 61411072 | 61411214 | 61411072 | ID=Msa0612870-mRNA-1:exon:16716;Parent=Msa0612870-mRNA-1 |
chr4_2 | exon | 61411248 | 61411513 | 61411248 | ID=Msa0612870-mRNA-1:exon:16717;Parent=Msa0612870-mRNA-1 |
chr4_2 | five_prime_UTR | 61401728 | 61401790 | 61401728 | ID=Msa0612870-mRNA-1:five_prime_utr;Parent=Msa0612870-mRNA-1 |
chr4_2 | five_prime_UTR | 61403287 | 61403564 | 61403287 | ID=Msa0612870-mRNA-1:five_prime_utr;Parent=Msa0612870-mRNA-1 |
chr4_2 | CDS | 61403565 | 61404022 | 61403565 | ID=Msa0612870-mRNA-1:cds;Parent=Msa0612870-mRNA-1 |
chr4_2 | CDS | 61404313 | 61404412 | 61404313 | ID=Msa0612870-mRNA-1:cds;Parent=Msa0612870-mRNA-1 |
chr4_2 | CDS | 61405154 | 61405493 | 61405154 | ID=Msa0612870-mRNA-1:cds;Parent=Msa0612870-mRNA-1 |
chr4_2 | CDS | 61406056 | 61406168 | 61406056 | ID=Msa0612870-mRNA-1:cds;Parent=Msa0612870-mRNA-1 |
chr4_2 | CDS | 61406410 | 61406538 | 61406410 | ID=Msa0612870-mRNA-1:cds;Parent=Msa0612870-mRNA-1 |
chr4_2 | CDS | 61406720 | 61406813 | 61406720 | ID=Msa0612870-mRNA-1:cds;Parent=Msa0612870-mRNA-1 |
chr4_2 | CDS | 61406963 | 61407073 | 61406963 | ID=Msa0612870-mRNA-1:cds;Parent=Msa0612870-mRNA-1 |
chr4_2 | CDS | 61407822 | 61408666 | 61407822 | ID=Msa0612870-mRNA-1:cds;Parent=Msa0612870-mRNA-1 |
chr4_2 | CDS | 61408839 | 61409101 | 61408839 | ID=Msa0612870-mRNA-1:cds;Parent=Msa0612870-mRNA-1 |
chr4_2 | CDS | 61410088 | 61410241 | 61410088 | ID=Msa0612870-mRNA-1:cds;Parent=Msa0612870-mRNA-1 |
chr4_2 | CDS | 61410509 | 61410606 | 61410509 | ID=Msa0612870-mRNA-1:cds;Parent=Msa0612870-mRNA-1 |
chr4_2 | CDS | 61410698 | 61410779 | 61410698 | ID=Msa0612870-mRNA-1:cds;Parent=Msa0612870-mRNA-1 |
chr4_2 | CDS | 61411072 | 61411155 | 61411072 | ID=Msa0612870-mRNA-1:cds;Parent=Msa0612870-mRNA-1 |
chr4_2 | three_prime_UTR | 61411156 | 61411214 | 61411156 | ID=Msa0612870-mRNA-1:three_prime_utr;Parent=Msa0612870-mRNA-1 |
chr4_2 | three_prime_UTR | 61411248 | 61411513 | 61411248 | ID=Msa0612870-mRNA-1:three_prime_utr;Parent=Msa0612870-mRNA-1 |
Gene Sequence |
Protein sequence |