Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030880 | XP_003624499.1 | 98.739 | 476 | 6 | 0 | 1 | 476 | 1 | 476 | 0.0 | 986 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030880 | sp|Q8VZJ0|SIA1_ARATH | 76.261 | 476 | 105 | 4 | 1 | 473 | 1 | 471 | 0.0 | 759 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030880 | G7KX93 | 98.739 | 476 | 6 | 0 | 1 | 476 | 1 | 476 | 0.0 | 986 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0054730 | Msa1030880 | 0.863325 | 2.698375e-64 | -8.615850e-47 |
| Msa0078140 | Msa1030880 | 0.807628 | 4.606356e-50 | -8.615850e-47 |
| Msa0106370 | Msa1030880 | 0.821228 | 4.514912e-53 | -8.615850e-47 |
| Msa0607750 | Msa1030880 | 0.834506 | 2.881487e-56 | -8.615850e-47 |
| Msa0612870 | Msa1030880 | 0.804451 | 2.146417e-49 | -8.615850e-47 |
| Msa0647450 | Msa1030880 | 0.813707 | 2.233044e-51 | -8.615850e-47 |
| Msa0661190 | Msa1030880 | 0.831699 | 1.439729e-55 | -8.615850e-47 |
| Msa0827980 | Msa1030880 | -0.814922 | 1.203864e-51 | -8.615850e-47 |
| Msa0180990 | Msa1030880 | 0.800143 | 1.654839e-48 | -8.615850e-47 |
| Msa0226250 | Msa1030880 | -0.802424 | 5.646657e-49 | -8.615850e-47 |
| Msa1019840 | Msa1030880 | 0.803469 | 3.434296e-49 | -8.615850e-47 |
| Msa1030880 | Msa1033410 | 0.818127 | 2.305287e-52 | -8.615850e-47 |
| Msa1030880 | Msa1073070 | 0.808807 | 2.583217e-50 | -8.615850e-47 |
| Msa1030880 | Msa1075220 | 0.824527 | 7.689758e-54 | -8.615850e-47 |
| Msa1030880 | Msa1116130 | 0.805370 | 1.379536e-49 | -8.615850e-47 |
| Msa1030880 | Msa1121450 | 0.817506 | 3.183391e-52 | -8.615850e-47 |
| Msa1030880 | Msa1139000 | 0.810230 | 1.278097e-50 | -8.615850e-47 |
| Msa1030880 | Msa1157930 | 0.820152 | 7.976378e-53 | -8.615850e-47 |
| Msa1030880 | Msa1162550 | 0.807555 | 4.773819e-50 | -8.615850e-47 |
| Msa1030880 | Msa1167220 | -0.803012 | 4.270480e-49 | -8.615850e-47 |
| Msa1030880 | Msa1201430 | 0.818178 | 2.244110e-52 | -8.615850e-47 |
| Msa1030880 | Msa1249640 | 0.821782 | 3.362480e-53 | -8.615850e-47 |
| Msa1030880 | Msa1254370 | 0.813158 | 2.948461e-51 | -8.615850e-47 |
| Msa1030880 | Msa1265340 | 0.814141 | 1.792195e-51 | -8.615850e-47 |
| Msa1030880 | Msa1445610 | 0.817479 | 3.227369e-52 | -8.615850e-47 |
| Msa1030880 | Msa1453780 | 0.807079 | 6.022484e-50 | -8.615850e-47 |
| Msa1030880 | Msa1454910 | 0.821063 | 4.927313e-53 | -8.615850e-47 |
| Msa0532790 | Msa1030880 | 0.807142 | 5.840418e-50 | -8.615850e-47 |
| Msa0548280 | Msa1030880 | 0.812379 | 4.367877e-51 | -8.615850e-47 |
| Msa0585000 | Msa1030880 | 0.821138 | 4.734353e-53 | -8.615850e-47 |
| Msa0923260 | Msa1030880 | 0.840835 | 6.844598e-58 | -8.615850e-47 |
| Msa0962190 | Msa1030880 | 0.822398 | 2.420442e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030880 | MtrunA17_Chr7g0252121 | 98.739 | 476 | 6 | 0 | 1 | 476 | 1 | 476 | 0.0 | 986 |
| Msa1030880 | MtrunA17_Chr8g0385931 | 42.588 | 425 | 212 | 8 | 55 | 473 | 45 | 443 | 5.29e-111 | 335 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030880 | AT1G08660.1 | 76.261 | 476 | 105 | 4 | 1 | 473 | 1 | 471 | 0.0 | 759 |
| Msa1030880 | AT1G08660.2 | 77.522 | 347 | 74 | 2 | 1 | 347 | 1 | 343 | 0.0 | 566 |
| Msa1030880 | AT1G08660.3 | 85.714 | 287 | 41 | 0 | 61 | 347 | 6 | 292 | 0.0 | 533 |
| Msa1030880 | AT3G48820.1 | 46.073 | 382 | 194 | 7 | 25 | 400 | 16 | 391 | 4.34e-115 | 346 |
| Msa1030880 | AT3G48820.2 | 48.295 | 352 | 173 | 6 | 55 | 400 | 34 | 382 | 2.79e-113 | 341 |
Find 153 sgRNAs with CRISPR-Local
Find 481 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGCCGTTGTTGGGAATTC+TGG | 0.154253 | 7_1:-65122431 | Msa1030880:CDS |
| TGGTGCCTTCAGGGTATTTA+AGG | 0.176614 | 7_1:+65123028 | None:intergenic |
| GTCAATATGTATAATTTAAT+TGG | 0.207820 | 7_1:-65118369 | Msa1030880:three_prime_UTR |
| AACTCATGAAAACCCTTTAT+AGG | 0.209533 | 7_1:+65118153 | None:intergenic |
| CTTAAAATCTGAGGTGTAAA+TGG | 0.225865 | 7_1:-65118569 | Msa1030880:exon |
| GACAAAAGCGGGCCTATTTC+AGG | 0.227048 | 7_1:-65118763 | Msa1030880:CDS |
| GCCTCCTCTTGGATCTCATT+GGG | 0.246413 | 7_1:+65118926 | None:intergenic |
| GAAAGATTTACCTCATTAAC+AGG | 0.252545 | 7_1:+65122338 | None:intergenic |
| GACCTTCTGAAGACAGAATT+TGG | 0.255480 | 7_1:-65122407 | Msa1030880:CDS |
| CAAGTGCTGTTGGTGCCTTC+AGG | 0.259132 | 7_1:+65123018 | None:intergenic |
| AACATGGTTCCTATTCTAAA+TGG | 0.261819 | 7_1:-65122087 | Msa1030880:CDS |
| TGTGATATTGTTGATATATA+TGG | 0.269716 | 7_1:-65119259 | Msa1030880:CDS |
| GGTTTAATTGTCAGGTAATC+AGG | 0.288156 | 7_1:-65118957 | Msa1030880:intron |
| TACAATTGTGCTATTCTTAG+TGG | 0.288420 | 7_1:+65122647 | None:intergenic |
| TGGATTGTAAACAGGCTAAT+AGG | 0.288727 | 7_1:-65123095 | Msa1030880:intron |
| ATGATCAACAAAGCCTATAA+AGG | 0.296949 | 7_1:-65118166 | Msa1030880:three_prime_UTR |
| GGATTGTAAACAGGCTAATA+GGG | 0.300073 | 7_1:-65123094 | Msa1030880:intron |
| TGCCTCCTCTTGGATCTCAT+TGG | 0.304803 | 7_1:+65118925 | None:intergenic |
| AGGGGTCTCTCAATATAAAA+TGG | 0.307366 | 7_1:-65118632 | Msa1030880:CDS |
| ATGTCTGATGATCCTGAAAT+AGG | 0.330717 | 7_1:+65118751 | None:intergenic |
| TGAAAGAGATAGACTGGATT+TGG | 0.333118 | 7_1:+65119349 | None:intergenic |
| GTTCCTATTCTAAATGGTTC+TGG | 0.334776 | 7_1:-65122081 | Msa1030880:intron |
| ACTTCATCCCAGATTTCATT+TGG | 0.339280 | 7_1:+65118501 | None:intergenic |
| TGGCTTATCATTTCTCTACT+TGG | 0.340741 | 7_1:+65118886 | None:intergenic |
| GCCAAGCTGCTGCATGTGCT+TGG | 0.357871 | 7_1:+65118866 | None:intergenic |
| ACAACTTCGACTTTGCTTCA+TGG | 0.361191 | 7_1:+65124800 | None:intergenic |
| AGAAATCAATGCAGTTATAA+AGG | 0.361897 | 7_1:-65119504 | Msa1030880:intron |
| AGACTTCATTCCAGTTCCTT+TGG | 0.375119 | 7_1:+65119303 | None:intergenic |
| GAAATAGATCACCAATTGAT+TGG | 0.377121 | 7_1:+65124493 | None:intergenic |
| TGACCAGTCTTGCCTCCTCT+TGG | 0.381860 | 7_1:+65118915 | None:intergenic |
| TTTCGTACTTGTGCCGTTGT+TGG | 0.388842 | 7_1:-65122440 | Msa1030880:CDS |
| ACTGTCATCCAAATGAAATC+TGG | 0.390617 | 7_1:-65118509 | Msa1030880:three_prime_UTR |
| CGTCGAGGTGCCAAAGGAAC+TGG | 0.396799 | 7_1:-65119313 | Msa1030880:CDS |
| ACCAACTTCTAGAATGTCTT+GGG | 0.397048 | 7_1:-65119044 | Msa1030880:CDS |
| TTCGTACTTGTGCCGTTGTT+GGG | 0.401244 | 7_1:-65122439 | Msa1030880:CDS |
| ATCCAATCCTCTTTCTTCTC+CGG | 0.401751 | 7_1:-65124621 | Msa1030880:intron |
| AAGTGCTGTTGGTGCCTTCA+GGG | 0.406821 | 7_1:+65123019 | None:intergenic |
| GTGCCGTTGTTGGGAATTCT+GGG | 0.407755 | 7_1:-65122430 | Msa1030880:CDS |
| AATCCAGTCTATCTCTTTCA+AGG | 0.408067 | 7_1:-65119346 | Msa1030880:CDS |
| TTGACGTTCGTCCTGGTGGT+TGG | 0.410568 | 7_1:-65122682 | Msa1030880:CDS |
| CCAAGTACGTTGGTCTTAAG+AGG | 0.419755 | 7_1:-65122143 | Msa1030880:CDS |
| TCATGCCTTTGAAAAGTTTG+AGG | 0.423468 | 7_1:-65118687 | Msa1030880:CDS |
| TATGTGAGGCAATACTACTA+TGG | 0.424803 | 7_1:-65122835 | Msa1030880:CDS |
| TTACCAGAACCATTTAGAAT+AGG | 0.429339 | 7_1:+65122078 | None:intergenic |
| GAGAAAGAGTTCTGCTGATA+AGG | 0.429487 | 7_1:-65118839 | Msa1030880:CDS |
| AAGAAGCACAGGTTCACTAT+AGG | 0.442299 | 7_1:-65118663 | Msa1030880:CDS |
| GCTGGTGGTAAAGGACAGTT+TGG | 0.442541 | 7_1:-65118817 | Msa1030880:CDS |
| TGACGTTCGTCCTGGTGGTT+GGG | 0.445087 | 7_1:-65122681 | Msa1030880:CDS |
| AGATCTAGAAATCACAATAT+AGG | 0.446794 | 7_1:-65118311 | Msa1030880:three_prime_UTR |
| GAGACCGAAGATTCTATATC+TGG | 0.448002 | 7_1:-65124685 | Msa1030880:CDS |
| AGGACAGTTTGGCAATTGTA+AGG | 0.448014 | 7_1:-65118806 | Msa1030880:CDS |
| GCTGATAAGGCTGGTGGTAA+AGG | 0.450712 | 7_1:-65118826 | Msa1030880:CDS |
| CCTCTTAAGACCAACGTACT+TGG | 0.452757 | 7_1:+65122143 | None:intergenic |
| AGTGGATTGTGTCCTTTCCT+AGG | 0.452910 | 7_1:+65119084 | None:intergenic |
| CTGAAGGCACCAACAGCACT+TGG | 0.456242 | 7_1:-65123017 | Msa1030880:CDS |
| CGAAACTGCCGTGGATGAAA+GGG | 0.457809 | 7_1:+65122458 | None:intergenic |
| CGTCGCAACTCCCAATCAAT+TGG | 0.459183 | 7_1:-65124504 | Msa1030880:CDS |
| TAAAATGGATGGCAATAAGT+TGG | 0.460044 | 7_1:-65118617 | Msa1030880:CDS |
| GGCAATACTACTATGGGAAC+AGG | 0.463908 | 7_1:-65122828 | Msa1030880:intron |
| CTGTCATCCAAATGAAATCT+GGG | 0.466099 | 7_1:-65118508 | Msa1030880:three_prime_UTR |
| ATTGGATGAAGAAGAGGAGG+AGG | 0.467963 | 7_1:+65124637 | None:intergenic |
| TATGGTTTCACCGTTGATCC+AGG | 0.471612 | 7_1:-65119241 | Msa1030880:CDS |
| AAGACCAGATATAGAATCTT+CGG | 0.474241 | 7_1:+65124681 | None:intergenic |
| TAGTATGCTCTTCCTTGAAG+TGG | 0.476909 | 7_1:+65119066 | None:intergenic |
| TACCAACTTCTAGAATGTCT+TGG | 0.482400 | 7_1:-65119045 | Msa1030880:CDS |
| TGATCAACAAAGCCTATAAA+GGG | 0.484609 | 7_1:-65118165 | Msa1030880:three_prime_UTR |
| GTTGCGACGATCTGAATAGA+AGG | 0.485099 | 7_1:+65124518 | None:intergenic |
| CCCCAAGACATTCTAGAAGT+TGG | 0.486983 | 7_1:+65119043 | None:intergenic |
| GATCCAAGAGGAGGCAAGAC+TGG | 0.489885 | 7_1:-65118918 | Msa1030880:CDS |
| ATGTGGACCCAGACAAAAGC+GGG | 0.494827 | 7_1:-65118774 | Msa1030880:CDS |
| CAAGATACTTCTCTGCTCCT+AGG | 0.495170 | 7_1:-65119101 | Msa1030880:CDS |
| AAAGGACACAATCCACTTCA+AGG | 0.497194 | 7_1:-65119078 | Msa1030880:CDS |
| ATTTGGATGACAGTTGGTTG+TGG | 0.498193 | 7_1:+65118518 | None:intergenic |
| AAATAGATCACCAATTGATT+GGG | 0.499131 | 7_1:+65124494 | None:intergenic |
| GTTTGGCAATTGTAAGGTGT+GGG | 0.501307 | 7_1:-65118800 | Msa1030880:CDS |
| GATGAAGAAGAGGAGGAGGA+AGG | 0.504124 | 7_1:+65124641 | None:intergenic |
| ACGAAACTGCCGTGGATGAA+AGG | 0.505939 | 7_1:+65122457 | None:intergenic |
| TCAACACTGTGGTCATGTTA+CGG | 0.506808 | 7_1:+65122717 | None:intergenic |
| ACCCACCATTCAGTGTATCC+TGG | 0.508551 | 7_1:+65119223 | None:intergenic |
| AAGAGGATTGGATGAAGAAG+AGG | 0.511247 | 7_1:+65124631 | None:intergenic |
| TATTTATTACAATGTTCGAT+TGG | 0.511916 | 7_1:-65118232 | Msa1030880:three_prime_UTR |
| GACCGGAGAAGAAAGAGGAT+TGG | 0.518968 | 7_1:+65124619 | None:intergenic |
| ATGAAACAGAGGAGCTATTG+AGG | 0.519166 | 7_1:+65118453 | None:intergenic |
| ATACCTTGAAAGAGATAGAC+TGG | 0.519627 | 7_1:+65119343 | None:intergenic |
| TGCCAAATTCTGTCTTCAGA+AGG | 0.522272 | 7_1:+65122405 | None:intergenic |
| GTCTATCTAAACCTGAAAAG+AGG | 0.523404 | 7_1:+65118262 | None:intergenic |
| GAGTATCTTGACGTTCGTCC+TGG | 0.528919 | 7_1:-65122689 | Msa1030880:CDS |
| AAGTTTGAGGAAAGAAGCAC+AGG | 0.529783 | 7_1:-65118674 | Msa1030880:CDS |
| AGTATATACCCAAGTGCTGT+TGG | 0.532147 | 7_1:+65123008 | None:intergenic |
| TTCACTATAGGCAGATGGAA+GGG | 0.532498 | 7_1:-65118651 | Msa1030880:CDS |
| CTCTGTTTCATCATGTATTG+CGG | 0.536455 | 7_1:-65118441 | Msa1030880:three_prime_UTR |
| TCACTATAGGCAGATGGAAG+GGG | 0.537519 | 7_1:-65118650 | Msa1030880:CDS |
| AGGATTGGATGAAGAAGAGG+AGG | 0.538350 | 7_1:+65124634 | None:intergenic |
| AGTTTGGCAATTGTAAGGTG+TGG | 0.538800 | 7_1:-65118801 | Msa1030880:CDS |
| GCCAAGCACATGCAGCAGCT+TGG | 0.538833 | 7_1:-65118867 | Msa1030880:CDS |
| GTCTCTCAATATAAAATGGA+TGG | 0.538948 | 7_1:-65118628 | Msa1030880:CDS |
| GATTTCATTTGGATGACAGT+TGG | 0.547928 | 7_1:+65118512 | None:intergenic |
| CAACGAGGCCCCTGTTAATG+AGG | 0.550984 | 7_1:-65122348 | Msa1030880:intron |
| AAGAGTTCTGCTGATAAGGC+TGG | 0.555214 | 7_1:-65118835 | Msa1030880:CDS |
| TTTATACTCAAGGTTATCCA+TGG | 0.564666 | 7_1:-65118337 | Msa1030880:three_prime_UTR |
| ATGTGAGGCAATACTACTAT+GGG | 0.565539 | 7_1:-65122834 | Msa1030880:CDS |
| TACTTCTCTGCTCCTAGGAA+AGG | 0.566992 | 7_1:-65119096 | Msa1030880:CDS |
| CCTCCTCTTGGATCTCATTG+GGG | 0.574779 | 7_1:+65118927 | None:intergenic |
| GATTGTAAACAGGCTAATAG+GGG | 0.582351 | 7_1:-65123093 | Msa1030880:intron |
| CAAGTACGTTGGTCTTAAGA+GGG | 0.583616 | 7_1:-65122142 | Msa1030880:CDS |
| GTACGAGTGATTTATACTCA+AGG | 0.584824 | 7_1:-65118347 | Msa1030880:three_prime_UTR |
| GTTCACTATAGGCAGATGGA+AGG | 0.587248 | 7_1:-65118652 | Msa1030880:CDS |
| TTGATCCAGGATACACTGAA+TGG | 0.595103 | 7_1:-65119228 | Msa1030880:intron |
| TTCAGTGTATCCTGGATCAA+CGG | 0.599178 | 7_1:+65119231 | None:intergenic |
| TATCTTGACGTTCGTCCTGG+TGG | 0.600969 | 7_1:-65122686 | Msa1030880:CDS |
| CATTATTGACCACTGCACAT+TGG | 0.614790 | 7_1:-65123052 | Msa1030880:CDS |
| GTATTGCGGCTAGCAGAGCA+TGG | 0.616129 | 7_1:-65118427 | Msa1030880:three_prime_UTR |
| TAGAAATATGCCAAGTACGT+TGG | 0.617176 | 7_1:-65122153 | Msa1030880:CDS |
| AAGAATCATAGTTCCATCGA+GGG | 0.617343 | 7_1:-65118403 | Msa1030880:three_prime_UTR |
| ACATCATACGTGTACTCCAA+AGG | 0.617356 | 7_1:+65122857 | None:intergenic |
| AAAGATTTACCTCATTAACA+GGG | 0.619512 | 7_1:+65122339 | None:intergenic |
| GATTTCCGTCTAGTTGTGAG+AGG | 0.620689 | 7_1:-65122120 | Msa1030880:CDS |
| TGATTTCTAGATCTCTACCA+TGG | 0.620782 | 7_1:+65118320 | None:intergenic |
| GCATAATCTACCCAACCACC+AGG | 0.621263 | 7_1:+65122671 | None:intergenic |
| GTACTGCGTCGAGGTGCCAA+AGG | 0.622746 | 7_1:-65119319 | Msa1030880:CDS |
| CAGCACCTCTCACAACTAGA+CGG | 0.626233 | 7_1:+65122115 | None:intergenic |
| TGCCGTTGTTGGGAATTCTG+GGG | 0.632866 | 7_1:-65122429 | Msa1030880:CDS |
| CGCAATACATGATGAAACAG+AGG | 0.639375 | 7_1:+65118442 | None:intergenic |
| CCCCAATGAGATCCAAGAGG+AGG | 0.640530 | 7_1:-65118927 | Msa1030880:CDS |
| GAAACTGCCGTGGATGAAAG+GGG | 0.640789 | 7_1:+65122459 | None:intergenic |
| TTGTAAGGTGTGGGGCAATG+TGG | 0.643155 | 7_1:-65118791 | Msa1030880:CDS |
| TGAAGGCACCAACAGCACTT+GGG | 0.643837 | 7_1:-65123016 | Msa1030880:intron |
| AAACTGCCGTGGATGAAAGG+GGG | 0.645583 | 7_1:+65122460 | None:intergenic |
| TTTGGCAATTGTAAGGTGTG+GGG | 0.648161 | 7_1:-65118799 | Msa1030880:CDS |
| AACTGCCGTGGATGAAAGGG+GGG | 0.649248 | 7_1:+65122461 | None:intergenic |
| GCTGAAGAAAGAATTATCTG+AGG | 0.650400 | 7_1:-65118210 | Msa1030880:three_prime_UTR |
| GAGAGGTGCTGCTCGCAACA+TGG | 0.652092 | 7_1:-65122103 | Msa1030880:CDS |
| TAGAATCTTCGGTCTCGCAG+CGG | 0.653147 | 7_1:+65124692 | None:intergenic |
| TTGGTCCTTAAATACCCTGA+AGG | 0.653210 | 7_1:-65123033 | Msa1030880:CDS |
| ACAGGTTCACTATAGGCAGA+TGG | 0.653999 | 7_1:-65118656 | Msa1030880:CDS |
| AGTTCTGCTGATAAGGCTGG+TGG | 0.665184 | 7_1:-65118832 | Msa1030880:CDS |
| GAGGAAGGAGAAGAATGCAG+CGG | 0.666630 | 7_1:+65124656 | None:intergenic |
| AAGATTTACCTCATTAACAG+GGG | 0.666674 | 7_1:+65122340 | None:intergenic |
| TATATCAACAATATCACACA+TGG | 0.673359 | 7_1:+65119264 | None:intergenic |
| GCACAAGTACGAAACTGCCG+TGG | 0.675905 | 7_1:+65122449 | None:intergenic |
| GTCCACTGTGAAGCAATGCG+TGG | 0.677869 | 7_1:-65124463 | Msa1030880:intron |
| GTCCCCAGAATTCCCAACAA+CGG | 0.678901 | 7_1:+65122427 | None:intergenic |
| ATTTAAGGACCAATGTGCAG+TGG | 0.682431 | 7_1:+65123043 | None:intergenic |
| TTACTGACCGGAGAAGAAAG+AGG | 0.690439 | 7_1:+65124614 | None:intergenic |
| GAGACACTCCTTAAAATCTG+AGG | 0.691632 | 7_1:-65118578 | Msa1030880:CDS |
| ATTGTAAACAGGCTAATAGG+GGG | 0.697172 | 7_1:-65123092 | Msa1030880:intron |
| AAAGAATCATAGTTCCATCG+AGG | 0.702532 | 7_1:-65118404 | Msa1030880:three_prime_UTR |
| AATGTGGACCCAGACAAAAG+CGG | 0.706953 | 7_1:-65118775 | Msa1030880:CDS |
| CCAACTTCTAGAATGTCTTG+GGG | 0.724688 | 7_1:-65119043 | Msa1030880:intron |
| ACTCCCCAATGAGATCCAAG+AGG | 0.745071 | 7_1:-65118930 | Msa1030880:CDS |
| GTACACGTATGATGTATGTG+AGG | 0.764730 | 7_1:-65122849 | Msa1030880:CDS |
| TACCACGCATTGCTTCACAG+TGG | 0.766694 | 7_1:+65124461 | None:intergenic |
| ATACTCTCTTGTCAACACTG+TGG | 0.788071 | 7_1:+65122706 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTATTATAATTGAGAT+GGG | + | chr7_1:65118515-65118534 | None:intergenic | 10.0% |
| !! | TATTATTATTATAATTGAGA+TGG | + | chr7_1:65118516-65118535 | None:intergenic | 10.0% |
| !!! | TTAAAAATTTCTTATTTCAT+TGG | - | chr7_1:65119536-65119555 | Msa1030880:CDS | 10.0% |
| !!! | TAATTTATTGTTTTAAAACT+TGG | - | chr7_1:65120649-65120668 | Msa1030880:intron | 10.0% |
| !! | TTAATTTATTTACTTATATG+GGG | + | chr7_1:65123137-65123156 | None:intergenic | 10.0% |
| !!! | CTTTAATTTATTTACTTATA+TGG | + | chr7_1:65123139-65123158 | None:intergenic | 10.0% |
| !! | TGAATTTATCAATATATTAT+CGG | - | chr7_1:65123216-65123235 | Msa1030880:intron | 10.0% |
| !! | AATAAATCAAAATTCAAATA+GGG | + | chr7_1:65123750-65123769 | None:intergenic | 10.0% |
| !! | AAATAAATCAAAATTCAAAT+AGG | + | chr7_1:65123751-65123770 | None:intergenic | 10.0% |
| !! | AGTATTCAAATTATAAAAAA+TGG | - | chr7_1:65124231-65124250 | Msa1030880:intron | 10.0% |
| !! | GTATTCAAATTATAAAAAAT+GGG | - | chr7_1:65124232-65124251 | Msa1030880:intron | 10.0% |
| !!! | TTTCTCTTATATATTTTTCT+AGG | + | chr7_1:65118792-65118811 | None:intergenic | 15.0% |
| !!! | TTAAGATTTGATTTTATTCA+AGG | - | chr7_1:65119581-65119600 | Msa1030880:intron | 15.0% |
| !! | TTGAAATAAAGTTTCAAATT+AGG | + | chr7_1:65120745-65120764 | None:intergenic | 15.0% |
| !! | TTATAATTTATGAAATTCTG+AGG | + | chr7_1:65121213-65121232 | None:intergenic | 15.0% |
| !!! | TAATTCTAAATTTTAGCATA+AGG | - | chr7_1:65121230-65121249 | Msa1030880:intron | 15.0% |
| !!! | CGTATTTTTGTTTAATTAAA+TGG | - | chr7_1:65121283-65121302 | Msa1030880:intron | 15.0% |
| !!! | ACATTTTTATCTAAAGATTT+TGG | - | chr7_1:65121591-65121610 | Msa1030880:intron | 15.0% |
| !!! | TAAAATTTTCCATGATAAAT+GGG | - | chr7_1:65121754-65121773 | Msa1030880:intron | 15.0% |
| !! | GAATTTATCAATATATTATC+GGG | - | chr7_1:65123217-65123236 | Msa1030880:intron | 15.0% |
| !!! | TTTTATATGTTTTTGACATT+TGG | - | chr7_1:65123967-65123986 | Msa1030880:intron | 15.0% |
| !! | GTCAATATGTATAATTTAAT+TGG | - | chr7_1:65124576-65124595 | Msa1030880:intron | 15.0% |
| !! | AGTATTAGTATGTAAAACTT+TGG | - | chr7_1:65118673-65118692 | Msa1030880:CDS | 20.0% |
| !!! | ATTTGATTTTATTCAAGGTT+TGG | - | chr7_1:65119586-65119605 | Msa1030880:intron | 20.0% |
| !! | AAAATTGAATCAAAGAAGAA+GGG | + | chr7_1:65119975-65119994 | None:intergenic | 20.0% |
| !!! | CATTTATCATGGAAAATTTT+AGG | + | chr7_1:65121755-65121774 | None:intergenic | 20.0% |
| !!! | CTAAAATTTTCCATGATAAA+TGG | - | chr7_1:65121753-65121772 | Msa1030880:intron | 20.0% |
| !!! | AAAATTTTCCATGATAAATG+GGG | - | chr7_1:65121755-65121774 | Msa1030880:intron | 20.0% |
| !!! | TTTTATTGATTCAAGGAAAA+TGG | + | chr7_1:65121927-65121946 | None:intergenic | 20.0% |
| !! | AAAAAAGGAGATATTAGTTA+TGG | + | chr7_1:65122385-65122404 | None:intergenic | 20.0% |
| !! | ATGAAAAGTAAAAGAAAACT+TGG | + | chr7_1:65122645-65122664 | None:intergenic | 20.0% |
| !! | ATTTACACAAGGAAAAATAA+GGG | + | chr7_1:65122755-65122774 | None:intergenic | 20.0% |
| !! | TATTTACACAAGGAAAAATA+AGG | + | chr7_1:65122756-65122775 | None:intergenic | 20.0% |
| !! | TGTGATATTGTTGATATATA+TGG | - | chr7_1:65123686-65123705 | Msa1030880:intron | 20.0% |
| !! | ATACAAATGTTATTCTATGT+GGG | + | chr7_1:65123945-65123964 | None:intergenic | 20.0% |
| !! | AATACAAATGTTATTCTATG+TGG | + | chr7_1:65123946-65123965 | None:intergenic | 20.0% |
| !! | TATTTATTACAATGTTCGAT+TGG | - | chr7_1:65124713-65124732 | Msa1030880:CDS | 20.0% |
| ! | TTAGAAAGAATGATGATTAG+AGG | + | chr7_1:65118366-65118385 | None:intergenic | 25.0% |
| ! | GAAAAGATAGATGAGAATTA+AGG | + | chr7_1:65118394-65118413 | None:intergenic | 25.0% |
| ! | AAATAGATCACCAATTGATT+GGG | + | chr7_1:65118454-65118473 | None:intergenic | 25.0% |
| ! | GCAAAAAATGAGAAAATGTA+AGG | + | chr7_1:65118561-65118580 | None:intergenic | 25.0% |
| ! | ATTAGTATGTAAAACTTTGG+TGG | - | chr7_1:65118676-65118695 | Msa1030880:CDS | 25.0% |
| ! | AGATTTGAAGATTAATGAGT+TGG | - | chr7_1:65118822-65118841 | Msa1030880:CDS | 25.0% |
| ! | GTTCTATCATATACCATATT+TGG | + | chr7_1:65118850-65118869 | None:intergenic | 25.0% |
| ! | TGGTATATGATAGAACATTA+TGG | - | chr7_1:65118854-65118873 | Msa1030880:CDS | 25.0% |
| !!! | ATCATTTCTAGTCAAATAGA+TGG | - | chr7_1:65118940-65118959 | Msa1030880:CDS | 25.0% |
| ! | GTGAAAAAAACAGAAAATAG+AGG | - | chr7_1:65119084-65119103 | Msa1030880:CDS | 25.0% |
| !! | TAGTTTTCTGTCTTTTTGAT+TGG | + | chr7_1:65119122-65119141 | None:intergenic | 25.0% |
| ! | ATTGAATGACAAAAGAAAAG+AGG | + | chr7_1:65119446-65119465 | None:intergenic | 25.0% |
| ! | TTAAGTGAGAAATATTGACA+TGG | + | chr7_1:65119520-65119539 | None:intergenic | 25.0% |
| ! | TTATTCAAGGTTTGGAAAAT+AGG | - | chr7_1:65119594-65119613 | Msa1030880:intron | 25.0% |
| !! | ATTTGAATCTCGTTTAAGTT+TGG | - | chr7_1:65119638-65119657 | Msa1030880:intron | 25.0% |
| ! | TTTACTAAAATTGTGTTAGC+TGG | - | chr7_1:65119694-65119713 | Msa1030880:intron | 25.0% |
| !!! | TTGTTTTTTTCTTCCTTTCT+TGG | - | chr7_1:65119780-65119799 | Msa1030880:intron | 25.0% |
| ! | GAAAATTGAATCAAAGAAGA+AGG | + | chr7_1:65119976-65119995 | None:intergenic | 25.0% |
| !! | TTACAAGTTTTCTTCTTGTA+GGG | - | chr7_1:65120396-65120415 | Msa1030880:intron | 25.0% |
| ! | AAAGATTTACCTCATTAACA+GGG | + | chr7_1:65120609-65120628 | None:intergenic | 25.0% |
| ! | TCAATATGTCAATAAGTAAC+TGG | + | chr7_1:65120694-65120713 | None:intergenic | 25.0% |
| !! | TATTTCTACACAATTCATAG+AGG | + | chr7_1:65120780-65120799 | None:intergenic | 25.0% |
| ! | TTAAACACGTATAATGTGAT+GGG | + | chr7_1:65121262-65121281 | None:intergenic | 25.0% |
| ! | ATTAAACACGTATAATGTGA+TGG | + | chr7_1:65121263-65121282 | None:intergenic | 25.0% |
| ! | ATGCTTAAGTCAGTAAATTT+GGG | + | chr7_1:65121391-65121410 | None:intergenic | 25.0% |
| !!! | ATCATGGAAAATTTTAGGAA+CGG | + | chr7_1:65121750-65121769 | None:intergenic | 25.0% |
| ! | CTCTATATCAAAATTTCACA+AGG | + | chr7_1:65121809-65121828 | None:intergenic | 25.0% |
| ! | CCTTGAATCAATAAAAACTA+CGG | - | chr7_1:65121931-65121950 | Msa1030880:intron | 25.0% |
| !! | CATTTTGTAGACCAATAAAT+GGG | + | chr7_1:65122059-65122078 | None:intergenic | 25.0% |
| !! | ACATTTTGTAGACCAATAAA+TGG | + | chr7_1:65122060-65122079 | None:intergenic | 25.0% |
| !! | TTTCTTATGATCAAGTTTTC+AGG | + | chr7_1:65122475-65122494 | None:intergenic | 25.0% |
| !! | ATGTATGGATTATTTACACA+AGG | + | chr7_1:65122766-65122785 | None:intergenic | 25.0% |
| ! | GGATAAATAAAACTTACACA+CGG | + | chr7_1:65122943-65122962 | None:intergenic | 25.0% |
| ! | AAAGTTACTGATGATCAAAT+TGG | + | chr7_1:65123035-65123054 | None:intergenic | 25.0% |
| ! | AATTTGATCATCAGTAACTT+TGG | - | chr7_1:65123034-65123053 | Msa1030880:CDS | 25.0% |
| ! | ATACCATACTATGAAGTTAT+GGG | + | chr7_1:65123098-65123117 | None:intergenic | 25.0% |
| ! | AACTATCTTGCTCAAATTTA+TGG | - | chr7_1:65123263-65123282 | Msa1030880:intron | 25.0% |
| ! | TCAAATTTATGGAAATCAAC+TGG | - | chr7_1:65123274-65123293 | Msa1030880:intron | 25.0% |
| ! | AGAAATCAATGCAGTTATAA+AGG | - | chr7_1:65123441-65123460 | Msa1030880:intron | 25.0% |
| ! | TATCAAGTTTATACACCAAA+AGG | + | chr7_1:65123502-65123521 | None:intergenic | 25.0% |
| ! | GTGTATAAACTTGATAAAGA+AGG | - | chr7_1:65123506-65123525 | Msa1030880:intron | 25.0% |
| !! | ACTAATTCTAGGAAATACAA+TGG | + | chr7_1:65123535-65123554 | None:intergenic | 25.0% |
| ! | AATGTGGATAAACTAATTCT+AGG | + | chr7_1:65123546-65123565 | None:intergenic | 25.0% |
| ! | TATATCAACAATATCACACA+TGG | + | chr7_1:65123684-65123703 | None:intergenic | 25.0% |
| ! | AGGAAACAAAAGTGATAATA+AGG | + | chr7_1:65123817-65123836 | None:intergenic | 25.0% |
| !!! | TATCACTTTTGTTTCCTTAT+AGG | - | chr7_1:65123820-65123839 | Msa1030880:intron | 25.0% |
| ! | AGATCTAGAAATCACAATAT+AGG | - | chr7_1:65124634-65124653 | Msa1030880:CDS | 25.0% |
| AAGACCAGATATAGAATCTT+CGG | + | chr7_1:65118267-65118286 | None:intergenic | 30.0% | |
| !!! | ATCTATCTTTTCGCTTTTTC+AGG | - | chr7_1:65118402-65118421 | Msa1030880:three_prime_UTR | 30.0% |
| GAAATAGATCACCAATTGAT+TGG | + | chr7_1:65118455-65118474 | None:intergenic | 30.0% | |
| TACTAATACTGAAAACATCC+AGG | + | chr7_1:65118663-65118682 | None:intergenic | 30.0% | |
| ! | TATGTAAAACTTTGGTGGTT+TGG | - | chr7_1:65118681-65118700 | Msa1030880:CDS | 30.0% |
| ! | ATGTAAAACTTTGGTGGTTT+GGG | - | chr7_1:65118682-65118701 | Msa1030880:CDS | 30.0% |
| ! | TAATGAGTTGGATCCAAATA+TGG | - | chr7_1:65118834-65118853 | Msa1030880:CDS | 30.0% |
| ATTATTCCACTAAGTAAGGT+CGG | + | chr7_1:65118902-65118921 | None:intergenic | 30.0% | |
| AAGCATTATTCCACTAAGTA+AGG | + | chr7_1:65118906-65118925 | None:intergenic | 30.0% | |
| GTGAAAGATCATAAACACAA+GGG | - | chr7_1:65119013-65119032 | Msa1030880:intron | 30.0% | |
| GAATTGTAAGTAGTATCAGT+AGG | - | chr7_1:65119045-65119064 | Msa1030880:CDS | 30.0% | |
| AGAGTAAACAAGCAAAAAAC+AGG | - | chr7_1:65119141-65119160 | Msa1030880:intron | 30.0% | |
| AAGCAAAAAACAGGAAATAG+AGG | - | chr7_1:65119150-65119169 | Msa1030880:intron | 30.0% | |
| TGCTAGAGATTTGTATCAAT+TGG | + | chr7_1:65119304-65119323 | None:intergenic | 30.0% | |
| TGTGGTTATTGGAATGAATT+GGG | + | chr7_1:65119361-65119380 | None:intergenic | 30.0% | |
| CACAAAATTGACAAAACAAG+TGG | + | chr7_1:65119415-65119434 | None:intergenic | 30.0% | |
| AATGACAAAAGAAAAGAGGT+TGG | + | chr7_1:65119442-65119461 | None:intergenic | 30.0% | |
| !! | CTATGACTTGAGTTATTTTG+AGG | - | chr7_1:65119466-65119485 | Msa1030880:intron | 30.0% |
| TTCAACTAATAGTTTGATGC+TGG | - | chr7_1:65119993-65120012 | Msa1030880:intron | 30.0% | |
| GTTCAAAAAATTTGAGCCTT+TGG | - | chr7_1:65120072-65120091 | Msa1030880:intron | 30.0% | |
| ! | TACAATTGTGCTATTCTTAG+TGG | + | chr7_1:65120301-65120320 | None:intergenic | 30.0% |
| ACATTTGATTATGAAGCAAG+TGG | - | chr7_1:65120371-65120390 | Msa1030880:intron | 30.0% | |
| ! | GTTACAAGTTTTCTTCTTGT+AGG | - | chr7_1:65120395-65120414 | Msa1030880:intron | 30.0% |
| ! | TACAAGTTTTCTTCTTGTAG+GGG | - | chr7_1:65120397-65120416 | Msa1030880:intron | 30.0% |
| AAGATTTACCTCATTAACAG+GGG | + | chr7_1:65120608-65120627 | None:intergenic | 30.0% | |
| GAAAGATTTACCTCATTAAC+AGG | + | chr7_1:65120610-65120629 | None:intergenic | 30.0% | |
| TGCTAATAAAAGCTCAAACA+TGG | - | chr7_1:65120719-65120738 | Msa1030880:intron | 30.0% | |
| AACATGGTTCCTATTCTAAA+TGG | - | chr7_1:65120858-65120877 | Msa1030880:intron | 30.0% | |
| ! | TTACCAGAACCATTTAGAAT+AGG | + | chr7_1:65120870-65120889 | None:intergenic | 30.0% |
| TCAAGGCATATAGAGATTTA+AGG | + | chr7_1:65121032-65121051 | None:intergenic | 30.0% | |
| AAATCTCTATATGCCTTGAA+TGG | - | chr7_1:65121033-65121052 | Msa1030880:intron | 30.0% | |
| AATCTCTATATGCCTTGAAT+GGG | - | chr7_1:65121034-65121053 | Msa1030880:intron | 30.0% | |
| ATGATGCAAGAAATTACACA+AGG | + | chr7_1:65121096-65121115 | None:intergenic | 30.0% | |
| AATTAAATGGTTGAATGCCT+TGG | - | chr7_1:65121296-65121315 | Msa1030880:intron | 30.0% | |
| TGCTTAAGTCAGTAAATTTG+GGG | + | chr7_1:65121390-65121409 | None:intergenic | 30.0% | |
| GATGCTTAAGTCAGTAAATT+TGG | + | chr7_1:65121392-65121411 | None:intergenic | 30.0% | |
| ACATGATCATTTGTGAAATG+TGG | - | chr7_1:65121437-65121456 | Msa1030880:intron | 30.0% | |
| AGATGTAACCTTGATAGAAA+GGG | + | chr7_1:65121709-65121728 | None:intergenic | 30.0% | |
| !! | TCATGGAAAATTTTAGGAAC+GGG | + | chr7_1:65121749-65121768 | None:intergenic | 30.0% |
| TTAAATAGCCCCATTTATCA+TGG | + | chr7_1:65121766-65121785 | None:intergenic | 30.0% | |
| ! | AAGTGAAAAATGCATCGATA+TGG | - | chr7_1:65121849-65121868 | Msa1030880:intron | 30.0% |
| ! | AGTGAAAAATGCATCGATAT+GGG | - | chr7_1:65121850-65121869 | Msa1030880:intron | 30.0% |
| AAGGAAAATGGATACACAAA+GGG | + | chr7_1:65121915-65121934 | None:intergenic | 30.0% | |
| !!! | CCGTAGTTTTTATTGATTCA+AGG | + | chr7_1:65121934-65121953 | None:intergenic | 30.0% |
| ! | GACACAAATTTTAAACTGAC+TGG | - | chr7_1:65122013-65122032 | Msa1030880:intron | 30.0% |
| CGAAACTGTAGAAATTGTAA+TGG | - | chr7_1:65122143-65122162 | Msa1030880:CDS | 30.0% | |
| AGTTTGAGTGAATATAGTAG+TGG | + | chr7_1:65122268-65122287 | None:intergenic | 30.0% | |
| GAATCCGCTACATAATAAAT+AGG | + | chr7_1:65122330-65122349 | None:intergenic | 30.0% | |
| TTAGTTATGGACAATCAAAG+TGG | + | chr7_1:65122372-65122391 | None:intergenic | 30.0% | |
| GGGAATTGTTAGAACAAAAA+AGG | + | chr7_1:65122400-65122419 | None:intergenic | 30.0% | |
| TACTGATGTAGATTAGAATG+GGG | + | chr7_1:65122521-65122540 | None:intergenic | 30.0% | |
| ! | GTACTGATGTAGATTAGAAT+GGG | + | chr7_1:65122522-65122541 | None:intergenic | 30.0% |
| ! | TGTACTGATGTAGATTAGAA+TGG | + | chr7_1:65122523-65122542 | None:intergenic | 30.0% |
| TTGTAGAAACAATAAGCGAA+TGG | - | chr7_1:65122543-65122562 | Msa1030880:intron | 30.0% | |
| ATATGTTTCCTGAACTCTAT+TGG | - | chr7_1:65122570-65122589 | Msa1030880:intron | 30.0% | |
| TCTCATCACTAAGACTTATT+TGG | - | chr7_1:65122672-65122691 | Msa1030880:CDS | 30.0% | |
| CTCATCACTAAGACTTATTT+GGG | - | chr7_1:65122673-65122692 | Msa1030880:CDS | 30.0% | |
| ! | TACAATGAGATGTATGCTTT+TGG | - | chr7_1:65122796-65122815 | Msa1030880:intron | 30.0% |
| ! | AAATTGGTTTAATGCTTGCA+AGG | + | chr7_1:65123019-65123038 | None:intergenic | 30.0% |
| TACTATGAAGTTATGGGAAA+GGG | + | chr7_1:65123092-65123111 | None:intergenic | 30.0% | |
| ATACTATGAAGTTATGGGAA+AGG | + | chr7_1:65123093-65123112 | None:intergenic | 30.0% | |
| TTTCCCATAACTTCATAGTA+TGG | - | chr7_1:65123092-65123111 | Msa1030880:intron | 30.0% | |
| CATACCATACTATGAAGTTA+TGG | + | chr7_1:65123099-65123118 | None:intergenic | 30.0% | |
| CATAACTTCATAGTATGGTA+TGG | - | chr7_1:65123097-65123116 | Msa1030880:intron | 30.0% | |
| !! | ATTTCTAGTTACGCAAGATA+GGG | + | chr7_1:65123310-65123329 | None:intergenic | 30.0% |
| !!! | TTGTTATTTTGCAGATGATG+AGG | - | chr7_1:65123390-65123409 | Msa1030880:intron | 30.0% |
| ! | GATATCTATTTGATGCCTTT+TGG | - | chr7_1:65123484-65123503 | Msa1030880:intron | 30.0% |
| ! | TGACATTTGGTTTAATTGTC+AGG | - | chr7_1:65123980-65123999 | Msa1030880:intron | 30.0% |
| ! | TCTTTCCTCAAACTTTTCAA+AGG | + | chr7_1:65124266-65124285 | None:intergenic | 30.0% |
| GTCTCTCAATATAAAATGGA+TGG | - | chr7_1:65124317-65124336 | Msa1030880:intron | 30.0% | |
| TAAAATGGATGGCAATAAGT+TGG | - | chr7_1:65124328-65124347 | Msa1030880:intron | 30.0% | |
| ! | CATTTACACCTCAGATTTTA+AGG | + | chr7_1:65124378-65124397 | None:intergenic | 30.0% |
| ! | CTTAAAATCTGAGGTGTAAA+TGG | - | chr7_1:65124376-65124395 | Msa1030880:intron | 30.0% |
| ! | GAGGTGTAAATGGTATTTTT+CGG | - | chr7_1:65124386-65124405 | Msa1030880:intron | 30.0% |
| TTTATACTCAAGGTTATCCA+TGG | - | chr7_1:65124608-65124627 | Msa1030880:intron | 30.0% | |
| ATGATCAACAAAGCCTATAA+AGG | - | chr7_1:65124779-65124798 | Msa1030880:five_prime_UTR | 30.0% | |
| TGATCAACAAAGCCTATAAA+GGG | - | chr7_1:65124780-65124799 | Msa1030880:five_prime_UTR | 30.0% | |
| AACTCATGAAAACCCTTTAT+AGG | + | chr7_1:65124795-65124814 | None:intergenic | 30.0% | |
| !! | AGGGTTTTCATGAGTTTTAA+TGG | - | chr7_1:65124799-65124818 | Msa1030880:five_prime_UTR | 30.0% |
| AGGAAATAGTGATTACTGAC+CGG | + | chr7_1:65118346-65118365 | None:intergenic | 35.0% | |
| ! | GTTTCAAGTGTTATAATGCC+TGG | - | chr7_1:65118642-65118661 | Msa1030880:CDS | 35.0% |
| GACTAGTAGATTATGTAGTC+AGG | - | chr7_1:65118718-65118737 | Msa1030880:CDS | 35.0% | |
| TGTCAAATCACTAGAGGTAA+AGG | - | chr7_1:65118762-65118781 | Msa1030880:CDS | 35.0% | |
| !!! | TCAGGTTTGAGTTTTGAAGT+AGG | - | chr7_1:65118978-65118997 | Msa1030880:intron | 35.0% |
| !!! | AGTTTTGAAGTAGGATCAGT+AGG | - | chr7_1:65118987-65119006 | Msa1030880:intron | 35.0% |
| GGTGAAAGATCATAAACACA+AGG | - | chr7_1:65119012-65119031 | Msa1030880:intron | 35.0% | |
| ! | TCTCTAGCATGCATCTATTT+TGG | - | chr7_1:65119315-65119334 | Msa1030880:CDS | 35.0% |
| GTGGTTATTGGAATGAATTG+GGG | + | chr7_1:65119360-65119379 | None:intergenic | 35.0% | |
| CTGTGGTTATTGGAATGAAT+TGG | + | chr7_1:65119362-65119381 | None:intergenic | 35.0% | |
| AATTGACAAAACAAGTGGCT+AGG | + | chr7_1:65119410-65119429 | None:intergenic | 35.0% | |
| ! | GAATCTCGTTTAAGTTTGGA+TGG | - | chr7_1:65119642-65119661 | Msa1030880:intron | 35.0% |
| ACTAAAATTGTGTTAGCTGG+TGG | - | chr7_1:65119697-65119716 | Msa1030880:intron | 35.0% | |
| TAAGAATCCAAACACTGTTC+TGG | - | chr7_1:65119745-65119764 | Msa1030880:intron | 35.0% | |
| TCAGATATTCTGACCAAGAA+AGG | + | chr7_1:65119796-65119815 | None:intergenic | 35.0% | |
| !!! | CTGAGTTTTGGATTGTAAAC+AGG | - | chr7_1:65119842-65119861 | Msa1030880:intron | 35.0% |
| TGGATTGTAAACAGGCTAAT+AGG | - | chr7_1:65119850-65119869 | Msa1030880:intron | 35.0% | |
| GGATTGTAAACAGGCTAATA+GGG | - | chr7_1:65119851-65119870 | Msa1030880:intron | 35.0% | |
| GATTGTAAACAGGCTAATAG+GGG | - | chr7_1:65119852-65119871 | Msa1030880:intron | 35.0% | |
| ATTGTAAACAGGCTAATAGG+GGG | - | chr7_1:65119853-65119872 | Msa1030880:intron | 35.0% | |
| TATGTGAGGCAATACTACTA+TGG | - | chr7_1:65120110-65120129 | Msa1030880:intron | 35.0% | |
| ATGTGAGGCAATACTACTAT+GGG | - | chr7_1:65120111-65120130 | Msa1030880:intron | 35.0% | |
| ! | ACAAGTTTTCTTCTTGTAGG+GGG | - | chr7_1:65120398-65120417 | Msa1030880:intron | 35.0% |
| TAGAAATATGCCAAGTACGT+TGG | - | chr7_1:65120792-65120811 | Msa1030880:intron | 35.0% | |
| GTTCCTATTCTAAATGGTTC+TGG | - | chr7_1:65120864-65120883 | Msa1030880:intron | 35.0% | |
| TCTCTTCGCTAACAAAAGAT+GGG | + | chr7_1:65121065-65121084 | None:intergenic | 35.0% | |
| ! | ATTCTGAGGATATGAAAACC+AGG | + | chr7_1:65121199-65121218 | None:intergenic | 35.0% |
| TAAGTCAGTAAATTTGGGGA+GGG | + | chr7_1:65121386-65121405 | None:intergenic | 35.0% | |
| TTAAGTCAGTAAATTTGGGG+AGG | + | chr7_1:65121387-65121406 | None:intergenic | 35.0% | |
| !!! | TGATCCACGTTTTTTATAGC+AGG | + | chr7_1:65121463-65121482 | None:intergenic | 35.0% |
| AAAACGTGGATCAACTTTGA+AGG | - | chr7_1:65121470-65121489 | Msa1030880:intron | 35.0% | |
| GATAAAAATGTAACTGTGCC+AGG | + | chr7_1:65121582-65121601 | None:intergenic | 35.0% | |
| ! | AAGGGGAAACAAAAGTCTTT+TGG | + | chr7_1:65121691-65121710 | None:intergenic | 35.0% |
| TTTGTTTCCCCTTTCTATCA+AGG | - | chr7_1:65121698-65121717 | Msa1030880:intron | 35.0% | |
| GATGTAACCTTGATAGAAAG+GGG | + | chr7_1:65121708-65121727 | None:intergenic | 35.0% | |
| GAGATGTAACCTTGATAGAA+AGG | + | chr7_1:65121710-65121729 | None:intergenic | 35.0% | |
| !! | TCACTTCAAGTACTGATTGA+AGG | + | chr7_1:65121835-65121854 | None:intergenic | 35.0% |
| ACAAAGGGACATTCTGTTAT+GGG | + | chr7_1:65121900-65121919 | None:intergenic | 35.0% | |
| CAAGGAAAATGGATACACAA+AGG | + | chr7_1:65121916-65121935 | None:intergenic | 35.0% | |
| TGGTTGATCATCAACAGTTA+GGG | + | chr7_1:65121972-65121991 | None:intergenic | 35.0% | |
| TTTGTAGACCAATAAATGGG+AGG | + | chr7_1:65122056-65122075 | None:intergenic | 35.0% | |
| ! | ATAATAAATAGGAGGGTGCA+AGG | + | chr7_1:65122319-65122338 | None:intergenic | 35.0% |
| CCGCTACATAATAAATAGGA+GGG | + | chr7_1:65122326-65122345 | None:intergenic | 35.0% | |
| CCCTCCTATTTATTATGTAG+CGG | - | chr7_1:65122323-65122342 | Msa1030880:intron | 35.0% | |
| TCCGCTACATAATAAATAGG+AGG | + | chr7_1:65122327-65122346 | None:intergenic | 35.0% | |
| AGAACAAGGTTGAATTTCAG+GGG | + | chr7_1:65122437-65122456 | None:intergenic | 35.0% | |
| GAGAACAAGGTTGAATTTCA+GGG | + | chr7_1:65122438-65122457 | None:intergenic | 35.0% | |
| TGAGAACAAGGTTGAATTTC+AGG | + | chr7_1:65122439-65122458 | None:intergenic | 35.0% | |
| CGAACAAAACATTGAGAACA+AGG | + | chr7_1:65122451-65122470 | None:intergenic | 35.0% | |
| AGACAAGGATGAGGATAAAA+GGG | + | chr7_1:65122498-65122517 | None:intergenic | 35.0% | |
| !!! | AAGCTTTGTTTTGGGTATAG+TGG | + | chr7_1:65122607-65122626 | None:intergenic | 35.0% |
| ACTATACCCAAAACAAAGCT+TGG | - | chr7_1:65122606-65122625 | Msa1030880:intron | 35.0% | |
| AGAATGAGTATCCTACAAAG+TGG | + | chr7_1:65122726-65122745 | None:intergenic | 35.0% | |
| ACACAAGGAAAAATAAGGGT+GGG | + | chr7_1:65122751-65122770 | None:intergenic | 35.0% | |
| TACACAAGGAAAAATAAGGG+TGG | + | chr7_1:65122752-65122771 | None:intergenic | 35.0% | |
| ! | TTGTAGTTGGTGTAGATGTA+TGG | + | chr7_1:65122781-65122800 | None:intergenic | 35.0% |
| AGCATACATCTCATTGTAGT+TGG | + | chr7_1:65122794-65122813 | None:intergenic | 35.0% | |
| GGATTGAGGATGCAAAAATT+TGG | - | chr7_1:65122894-65122913 | Msa1030880:intron | 35.0% | |
| AGTGATGAAGTGATATTGGA+GGG | + | chr7_1:65122964-65122983 | None:intergenic | 35.0% | |
| ATGGAAATCAACTGGTAGAT+AGG | - | chr7_1:65123282-65123301 | Msa1030880:intron | 35.0% | |
| !! | GATTTCTAGTTACGCAAGAT+AGG | + | chr7_1:65123311-65123330 | None:intergenic | 35.0% |
| AAAGGTAGTGCAAAAGAATG+TGG | + | chr7_1:65123562-65123581 | None:intergenic | 35.0% | |
| TTGGTAGAGTCTGCATAAAA+AGG | + | chr7_1:65123580-65123599 | None:intergenic | 35.0% | |
| TGAAAGAGATAGACTGGATT+TGG | + | chr7_1:65123599-65123618 | None:intergenic | 35.0% | |
| AATCCAGTCTATCTCTTTCA+AGG | - | chr7_1:65123599-65123618 | Msa1030880:intron | 35.0% | |
| ATACCTTGAAAGAGATAGAC+TGG | + | chr7_1:65123605-65123624 | None:intergenic | 35.0% | |
| !! | GAGAAGTATCTTGTCCTATA+AGG | + | chr7_1:65123837-65123856 | None:intergenic | 35.0% |
| !! | TACCAACTTCTAGAATGTCT+TGG | - | chr7_1:65123900-65123919 | Msa1030880:intron | 35.0% |
| !! | ACCAACTTCTAGAATGTCTT+GGG | - | chr7_1:65123901-65123920 | Msa1030880:intron | 35.0% |
| GGTTTAATTGTCAGGTAATC+AGG | - | chr7_1:65123988-65124007 | Msa1030880:intron | 35.0% | |
| TGGCTTATCATTTCTCTACT+TGG | + | chr7_1:65124062-65124081 | None:intergenic | 35.0% | |
| ATGTCTGATGATCCTGAAAT+AGG | + | chr7_1:65124197-65124216 | None:intergenic | 35.0% | |
| ! | TCATGCCTTTGAAAAGTTTG+AGG | - | chr7_1:65124258-65124277 | Msa1030880:intron | 35.0% |
| AGGGGTCTCTCAATATAAAA+TGG | - | chr7_1:65124313-65124332 | Msa1030880:intron | 35.0% | |
| GATTTCATTTGGATGACAGT+TGG | + | chr7_1:65124436-65124455 | None:intergenic | 35.0% | |
| ACTGTCATCCAAATGAAATC+TGG | - | chr7_1:65124436-65124455 | Msa1030880:intron | 35.0% | |
| CTGTCATCCAAATGAAATCT+GGG | - | chr7_1:65124437-65124456 | Msa1030880:intron | 35.0% | |
| ACTTCATCCCAGATTTCATT+TGG | + | chr7_1:65124447-65124466 | None:intergenic | 35.0% | |
| CTCTGTTTCATCATGTATTG+CGG | - | chr7_1:65124504-65124523 | Msa1030880:CDS | 35.0% | |
| AAAGAATCATAGTTCCATCG+AGG | - | chr7_1:65124541-65124560 | Msa1030880:intron | 35.0% | |
| AAGAATCATAGTTCCATCGA+GGG | - | chr7_1:65124542-65124561 | Msa1030880:intron | 35.0% | |
| GTACGAGTGATTTATACTCA+AGG | - | chr7_1:65124598-65124617 | Msa1030880:intron | 35.0% | |
| ! | TGATTTCTAGATCTCTACCA+TGG | + | chr7_1:65124628-65124647 | None:intergenic | 35.0% |
| GTCTATCTAAACCTGAAAAG+AGG | + | chr7_1:65124686-65124705 | None:intergenic | 35.0% | |
| GCTGAAGAAAGAATTATCTG+AGG | - | chr7_1:65124735-65124754 | Msa1030880:exon | 35.0% | |
| ACAACTTCGACTTTGCTTCA+TGG | + | chr7_1:65118148-65118167 | None:intergenic | 40.0% | |
| GAGACCGAAGATTCTATATC+TGG | - | chr7_1:65118260-65118279 | Msa1030880:three_prime_UTR | 40.0% | |
| AAGAGGATTGGATGAAGAAG+AGG | + | chr7_1:65118317-65118336 | None:intergenic | 40.0% | |
| ATCCAATCCTCTTTCTTCTC+CGG | - | chr7_1:65118324-65118343 | Msa1030880:three_prime_UTR | 40.0% | |
| !! | TTGCTATGCGTAGTTTGCTA+AGG | - | chr7_1:65118577-65118596 | Msa1030880:CDS | 40.0% |
| AGGAGAGTAGATCAGATGAA+GGG | - | chr7_1:65118738-65118757 | Msa1030880:CDS | 40.0% | |
| AAGGGTTGTCAAATCACTAG+AGG | - | chr7_1:65118756-65118775 | Msa1030880:CDS | 40.0% | |
| ATGTAACCGACCTTACTTAG+TGG | - | chr7_1:65118893-65118912 | Msa1030880:CDS | 40.0% | |
| TGGTTATGAGCAATGTAGTC+AGG | - | chr7_1:65118960-65118979 | Msa1030880:intron | 40.0% | |
| TTGAAGTAGGATCAGTAGGT+TGG | - | chr7_1:65118991-65119010 | Msa1030880:intron | 40.0% | |
| ACGCATAACAATTGTAGTCC+AGG | + | chr7_1:65119252-65119271 | None:intergenic | 40.0% | |
| CTTGTCAACACTGTGGTTAT+TGG | + | chr7_1:65119372-65119391 | None:intergenic | 40.0% | |
| GTCAAATCCAGAACAGTGTT+TGG | + | chr7_1:65119755-65119774 | None:intergenic | 40.0% | |
| ! | TGAAGAACTGAGCTGAGTTT+TGG | - | chr7_1:65119830-65119849 | Msa1030880:intron | 40.0% |
| CATTATTGACCACTGCACAT+TGG | - | chr7_1:65119893-65119912 | Msa1030880:intron | 40.0% | |
| ATTTAAGGACCAATGTGCAG+TGG | + | chr7_1:65119905-65119924 | None:intergenic | 40.0% | |
| TTGGTCCTTAAATACCCTGA+AGG | - | chr7_1:65119912-65119931 | Msa1030880:intron | 40.0% | |
| ! | AGTATATACCCAAGTGCTGT+TGG | + | chr7_1:65119940-65119959 | None:intergenic | 40.0% |
| ACATCATACGTGTACTCCAA+AGG | + | chr7_1:65120091-65120110 | None:intergenic | 40.0% | |
| GTACACGTATGATGTATGTG+AGG | - | chr7_1:65120096-65120115 | Msa1030880:intron | 40.0% | |
| CTGAAACACAACTTAAGCAG+AGG | + | chr7_1:65120168-65120187 | None:intergenic | 40.0% | |
| ! | CTCTGCTTAAGTTGTGTTTC+AGG | - | chr7_1:65120166-65120185 | Msa1030880:intron | 40.0% |
| TCAACACTGTGGTCATGTTA+CGG | + | chr7_1:65120231-65120250 | None:intergenic | 40.0% | |
| ATACTCTCTTGTCAACACTG+TGG | + | chr7_1:65120242-65120261 | None:intergenic | 40.0% | |
| ! | CAAGTTTTCTTCTTGTAGGG+GGG | - | chr7_1:65120399-65120418 | Msa1030880:intron | 40.0% |
| ! | GACCTTCTGAAGACAGAATT+TGG | - | chr7_1:65120538-65120557 | Msa1030880:intron | 40.0% |
| TGCCAAATTCTGTCTTCAGA+AGG | + | chr7_1:65120543-65120562 | None:intergenic | 40.0% | |
| !! | CAAGTACGTTGGTCTTAAGA+GGG | - | chr7_1:65120803-65120822 | Msa1030880:intron | 40.0% |
| ATAACCACGCATGAGATTCT+GGG | - | chr7_1:65120936-65120955 | Msa1030880:intron | 40.0% | |
| AGATGGGTATAACCCATTCA+AGG | + | chr7_1:65121049-65121068 | None:intergenic | 40.0% | |
| CTCTCTTCGCTAACAAAAGA+TGG | + | chr7_1:65121066-65121085 | None:intergenic | 40.0% | |
| TCTAATTCTATCCCGTGTGA+AGG | - | chr7_1:65121167-65121186 | Msa1030880:intron | 40.0% | |
| CTAATTCTATCCCGTGTGAA+GGG | - | chr7_1:65121168-65121187 | Msa1030880:intron | 40.0% | |
| ATCAGTGGTCATAATCGTGT+TGG | + | chr7_1:65121344-65121363 | None:intergenic | 40.0% | |
| GGGGATTAAAATTGGATCAG+TGG | + | chr7_1:65121359-65121378 | None:intergenic | 40.0% | |
| ! | GGATCAACTTTGAAGGTTTG+AGG | - | chr7_1:65121477-65121496 | Msa1030880:intron | 40.0% |
| ACCCTGTTTGTATTTGTTCC+TGG | - | chr7_1:65121561-65121580 | Msa1030880:intron | 40.0% | |
| GCCAGGAACAAATACAAACA+GGG | + | chr7_1:65121565-65121584 | None:intergenic | 40.0% | |
| TGCCAGGAACAAATACAAAC+AGG | + | chr7_1:65121566-65121585 | None:intergenic | 40.0% | |
| GGAAATAATGTGAGAGAAGC+TGG | - | chr7_1:65121612-65121631 | Msa1030880:intron | 40.0% | |
| !! | CTTCAAGTACTGATTGAAGG+TGG | + | chr7_1:65121832-65121851 | None:intergenic | 40.0% |
| ! | GAAAAATGCATCGATATGGG+TGG | - | chr7_1:65121853-65121872 | Msa1030880:intron | 40.0% |
| CACAAAGGGACATTCTGTTA+TGG | + | chr7_1:65121901-65121920 | None:intergenic | 40.0% | |
| TCATCAACAGTTAGGGAAAC+AGG | + | chr7_1:65121965-65121984 | None:intergenic | 40.0% | |
| GTGGTTGATCATCAACAGTT+AGG | + | chr7_1:65121973-65121992 | None:intergenic | 40.0% | |
| AAATTTGTGTCGCCCTGTTA+GGG | + | chr7_1:65122004-65122023 | None:intergenic | 40.0% | |
| AAAATTTGTGTCGCCCTGTT+AGG | + | chr7_1:65122005-65122024 | None:intergenic | 40.0% | |
| !!! | TCCCAGCACTTTTTCTACAT+AGG | - | chr7_1:65122112-65122131 | Msa1030880:CDS | 40.0% |
| !! | GCCTATGTAGAAAAAGTGCT+GGG | + | chr7_1:65122116-65122135 | None:intergenic | 40.0% |
| ! | TGCCTATGTAGAAAAAGTGC+TGG | + | chr7_1:65122117-65122136 | None:intergenic | 40.0% |
| CAATTTCTACAGTTTCGCAG+CGG | + | chr7_1:65122140-65122159 | None:intergenic | 40.0% | |
| !! | TGGTTAGCTGGTTTGTTAGA+GGG | + | chr7_1:65122352-65122371 | None:intergenic | 40.0% |
| GAGACAAGGATGAGGATAAA+AGG | + | chr7_1:65122499-65122518 | None:intergenic | 40.0% | |
| TAGATTAGAATGGGGAGACA+AGG | + | chr7_1:65122513-65122532 | None:intergenic | 40.0% | |
| !! | TTCCTGAACTCTATTGGCTT+TGG | - | chr7_1:65122576-65122595 | Msa1030880:intron | 40.0% |
| TACCCAAAACAAAGCTTGGT+TGG | - | chr7_1:65122610-65122629 | Msa1030880:intron | 40.0% | |
| !!! | TGCCAACCAAGCTTTGTTTT+GGG | + | chr7_1:65122615-65122634 | None:intergenic | 40.0% |
| !!! | ATGCCAACCAAGCTTTGTTT+TGG | + | chr7_1:65122616-65122635 | None:intergenic | 40.0% |
| !! | CTTTTGGTGTATGAGCAACT+TGG | - | chr7_1:65122812-65122831 | Msa1030880:intron | 40.0% |
| !! | TAAGACTGTTCTGAGGATTG+AGG | - | chr7_1:65122880-65122899 | Msa1030880:CDS | 40.0% |
| !! | ACGGTTTTGTATTAAGCCCA+CGG | + | chr7_1:65122924-65122943 | None:intergenic | 40.0% |
| GAGTGATGAAGTGATATTGG+AGG | + | chr7_1:65122965-65122984 | None:intergenic | 40.0% | |
| GAGGAGTGATGAAGTGATAT+TGG | + | chr7_1:65122968-65122987 | None:intergenic | 40.0% | |
| TAGCAAGTAAATCGCTTCCA+TGG | - | chr7_1:65122989-65123008 | Msa1030880:intron | 40.0% | |
| AGACTTCATTCCAGTTCCTT+TGG | + | chr7_1:65123645-65123664 | None:intergenic | 40.0% | |
| TTCAGTGTATCCTGGATCAA+CGG | + | chr7_1:65123717-65123736 | None:intergenic | 40.0% | |
| TTGATCCAGGATACACTGAA+TGG | - | chr7_1:65123717-65123736 | Msa1030880:intron | 40.0% | |
| AAAGGACACAATCCACTTCA+AGG | - | chr7_1:65123867-65123886 | Msa1030880:intron | 40.0% | |
| TAGTATGCTCTTCCTTGAAG+TGG | + | chr7_1:65123882-65123901 | None:intergenic | 40.0% | |
| !! | CCAACTTCTAGAATGTCTTG+GGG | - | chr7_1:65123902-65123921 | Msa1030880:intron | 40.0% |
| GAGAAAGAGTTCTGCTGATA+AGG | - | chr7_1:65124106-65124125 | Msa1030880:intron | 40.0% | |
| AGGACAGTTTGGCAATTGTA+AGG | - | chr7_1:65124139-65124158 | Msa1030880:intron | 40.0% | |
| AGTTTGGCAATTGTAAGGTG+TGG | - | chr7_1:65124144-65124163 | Msa1030880:intron | 40.0% | |
| GTTTGGCAATTGTAAGGTGT+GGG | - | chr7_1:65124145-65124164 | Msa1030880:intron | 40.0% | |
| TTTGGCAATTGTAAGGTGTG+GGG | - | chr7_1:65124146-65124165 | Msa1030880:intron | 40.0% | |
| ! | AAGTTTGAGGAAAGAAGCAC+AGG | - | chr7_1:65124271-65124290 | Msa1030880:intron | 40.0% |
| ! | AAGAAGCACAGGTTCACTAT+AGG | - | chr7_1:65124282-65124301 | Msa1030880:intron | 40.0% |
| TTCACTATAGGCAGATGGAA+GGG | - | chr7_1:65124294-65124313 | Msa1030880:intron | 40.0% | |
| GAGACACTCCTTAAAATCTG+AGG | - | chr7_1:65124367-65124386 | Msa1030880:intron | 40.0% | |
| ATTTGGATGACAGTTGGTTG+TGG | + | chr7_1:65124430-65124449 | None:intergenic | 40.0% | |
| ATGAAACAGAGGAGCTATTG+AGG | + | chr7_1:65124495-65124514 | None:intergenic | 40.0% | |
| CGCAATACATGATGAAACAG+AGG | + | chr7_1:65124506-65124525 | None:intergenic | 40.0% | |
| ! | AGTTTGATGTGCCTCTTTTC+AGG | - | chr7_1:65124672-65124691 | Msa1030880:CDS | 40.0% |
| ! | CCAGTGAACGACAACGTTTT+TGG | + | chr7_1:65118182-65118201 | None:intergenic | 45.0% |
| CCAAAAACGTTGTCGTTCAC+TGG | - | chr7_1:65118179-65118198 | Msa1030880:three_prime_UTR | 45.0% | |
| ATTGGATGAAGAAGAGGAGG+AGG | + | chr7_1:65118311-65118330 | None:intergenic | 45.0% | |
| AGGATTGGATGAAGAAGAGG+AGG | + | chr7_1:65118314-65118333 | None:intergenic | 45.0% | |
| TTACTGACCGGAGAAGAAAG+AGG | + | chr7_1:65118334-65118353 | None:intergenic | 45.0% | |
| GTTGCGACGATCTGAATAGA+AGG | + | chr7_1:65118430-65118449 | None:intergenic | 45.0% | |
| CAGGAGAGTAGATCAGATGA+AGG | - | chr7_1:65118737-65118756 | Msa1030880:CDS | 45.0% | |
| AGCAGAGCAAAAACGTGCTA+TGG | - | chr7_1:65119195-65119214 | Msa1030880:intron | 45.0% | |
| GCAGAGCAAAAACGTGCTAT+GGG | - | chr7_1:65119196-65119215 | Msa1030880:intron | 45.0% | |
| AAAAACGTGCTATGGGACGT+AGG | - | chr7_1:65119203-65119222 | Msa1030880:intron | 45.0% | |
| TCACTCTCTTGTCAACACTG+TGG | + | chr7_1:65119379-65119398 | None:intergenic | 45.0% | |
| ! | TGGTGCCTTCAGGGTATTTA+AGG | + | chr7_1:65119920-65119939 | None:intergenic | 45.0% |
| GGCAATACTACTATGGGAAC+AGG | - | chr7_1:65120117-65120136 | Msa1030880:intron | 45.0% | |
| ! | TTTCGTACTTGTGCCGTTGT+TGG | - | chr7_1:65120505-65120524 | Msa1030880:intron | 45.0% |
| ! | TTCGTACTTGTGCCGTTGTT+GGG | - | chr7_1:65120506-65120525 | Msa1030880:intron | 45.0% |
| !!! | TGCTGTTTTTCGAGACAACG+AGG | - | chr7_1:65120582-65120601 | Msa1030880:intron | 45.0% |
| CCTCTTAAGACCAACGTACT+TGG | + | chr7_1:65120805-65120824 | None:intergenic | 45.0% | |
| !! | CCAAGTACGTTGGTCTTAAG+AGG | - | chr7_1:65120802-65120821 | Msa1030880:intron | 45.0% |
| GATTTCCGTCTAGTTGTGAG+AGG | - | chr7_1:65120825-65120844 | Msa1030880:intron | 45.0% | |
| GATAACCACGCATGAGATTC+TGG | - | chr7_1:65120935-65120954 | Msa1030880:intron | 45.0% | |
| AGGGTGGAGGGGATTAAAAT+TGG | + | chr7_1:65121367-65121386 | None:intergenic | 45.0% | |
| GTGGCCTGCTATAAAAAACG+TGG | - | chr7_1:65121456-65121475 | Msa1030880:intron | 45.0% | |
| ! | TGCATCGATATGGGTGGATT+AGG | - | chr7_1:65121859-65121878 | Msa1030880:intron | 45.0% |
| ACCACCGTTATATCCCTAAC+AGG | - | chr7_1:65121988-65122007 | Msa1030880:intron | 45.0% | |
| CCACCGTTATATCCCTAACA+GGG | - | chr7_1:65121989-65122008 | Msa1030880:intron | 45.0% | |
| TCGCCCTGTTAGGGATATAA+CGG | + | chr7_1:65121995-65122014 | None:intergenic | 45.0% | |
| !! | GTGGTTAGCTGGTTTGTTAG+AGG | + | chr7_1:65122353-65122372 | None:intergenic | 45.0% |
| GGACAATCAAAGTGGTTAGC+TGG | + | chr7_1:65122364-65122383 | None:intergenic | 45.0% | |
| AAGGTTGAATTTCAGGGGAG+TGG | + | chr7_1:65122432-65122451 | None:intergenic | 45.0% | |
| AGCCAAAGCCAATAGAGTTC+AGG | + | chr7_1:65122581-65122600 | None:intergenic | 45.0% | |
| !! | GAACTCTATTGGCTTTGGCT+TGG | - | chr7_1:65122581-65122600 | Msa1030880:intron | 45.0% |
| AGGCACTAGATCCACTTTGT+AGG | - | chr7_1:65122712-65122731 | Msa1030880:CDS | 45.0% | |
| TCTTACACCACTGCTGGAAT+CGG | + | chr7_1:65122865-65122884 | None:intergenic | 45.0% | |
| AGTGGTGTAAGACTGTTCTG+AGG | - | chr7_1:65122873-65122892 | Msa1030880:CDS | 45.0% | |
| ! | TTTTGTATTAAGCCCACGGG+TGG | + | chr7_1:65122920-65122939 | None:intergenic | 45.0% |
| !! | CGGTTTTGTATTAAGCCCAC+GGG | + | chr7_1:65122923-65122942 | None:intergenic | 45.0% |
| ! | GAAGCGATTTACTTGCTACG+AGG | + | chr7_1:65122987-65123006 | None:intergenic | 45.0% |
| TATGGTTTCACCGTTGATCC+AGG | - | chr7_1:65123704-65123723 | Msa1030880:intron | 45.0% | |
| ATCCAGGATACACTGAATGG+TGG | - | chr7_1:65123720-65123739 | Msa1030880:intron | 45.0% | |
| TCCAGGATACACTGAATGGT+GGG | - | chr7_1:65123721-65123740 | Msa1030880:intron | 45.0% | |
| CAAGATACTTCTCTGCTCCT+AGG | - | chr7_1:65123844-65123863 | Msa1030880:intron | 45.0% | |
| TACTTCTCTGCTCCTAGGAA+AGG | - | chr7_1:65123849-65123868 | Msa1030880:intron | 45.0% | |
| !! | AGTGGATTGTGTCCTTTCCT+AGG | + | chr7_1:65123864-65123883 | None:intergenic | 45.0% |
| ! | CCCCAAGACATTCTAGAAGT+TGG | + | chr7_1:65123905-65123924 | None:intergenic | 45.0% |
| AAGAGTTCTGCTGATAAGGC+TGG | - | chr7_1:65124110-65124129 | Msa1030880:intron | 45.0% | |
| AATGTGGACCCAGACAAAAG+CGG | - | chr7_1:65124170-65124189 | Msa1030880:intron | 45.0% | |
| !! | AAATAGGCCCGCTTTTGTCT+GGG | + | chr7_1:65124181-65124200 | None:intergenic | 45.0% |
| ACAGGTTCACTATAGGCAGA+TGG | - | chr7_1:65124289-65124308 | Msa1030880:intron | 45.0% | |
| GTTCACTATAGGCAGATGGA+AGG | - | chr7_1:65124293-65124312 | Msa1030880:intron | 45.0% | |
| TCACTATAGGCAGATGGAAG+GGG | - | chr7_1:65124295-65124314 | Msa1030880:intron | 45.0% | |
| !!! | TTTAATTTATTTACTTATAT+GGG | + | chr7_1:65123138-65123157 | None:intergenic | 5.0% |
| TAGAATCTTCGGTCTCGCAG+CGG | + | chr7_1:65118256-65118275 | None:intergenic | 50.0% | |
| GAGGAAGGAGAAGAATGCAG+CGG | + | chr7_1:65118292-65118311 | None:intergenic | 50.0% | |
| GATGAAGAAGAGGAGGAGGA+AGG | + | chr7_1:65118307-65118326 | None:intergenic | 50.0% | |
| GACCGGAGAAGAAAGAGGAT+TGG | + | chr7_1:65118329-65118348 | None:intergenic | 50.0% | |
| CGTCGCAACTCCCAATCAAT+TGG | - | chr7_1:65118441-65118460 | Msa1030880:three_prime_UTR | 50.0% | |
| TACCACGCATTGCTTCACAG+TGG | + | chr7_1:65118487-65118506 | None:intergenic | 50.0% | |
| ! | TTGTAGTCCAGGTTGAGTGC+TGG | + | chr7_1:65119241-65119260 | None:intergenic | 50.0% |
| AAACAGGCTAATAGGGGGCT+TGG | - | chr7_1:65119858-65119877 | Msa1030880:intron | 50.0% | |
| ! | AAGTGCTGTTGGTGCCTTCA+GGG | + | chr7_1:65119929-65119948 | None:intergenic | 50.0% |
| !! | TGAAGGCACCAACAGCACTT+GGG | - | chr7_1:65119929-65119948 | Msa1030880:intron | 50.0% |
| GAGTATCTTGACGTTCGTCC+TGG | - | chr7_1:65120256-65120275 | Msa1030880:intron | 50.0% | |
| TATCTTGACGTTCGTCCTGG+TGG | - | chr7_1:65120259-65120278 | Msa1030880:intron | 50.0% | |
| GCATAATCTACCCAACCACC+AGG | + | chr7_1:65120277-65120296 | None:intergenic | 50.0% | |
| ! | TGGATGAAAGGGGGGTTTTG+CGG | + | chr7_1:65120479-65120498 | None:intergenic | 50.0% |
| CAAAACCCCCCTTTCATCCA+CGG | - | chr7_1:65120479-65120498 | Msa1030880:intron | 50.0% | |
| AAACTGCCGTGGATGAAAGG+GGG | + | chr7_1:65120488-65120507 | None:intergenic | 50.0% | |
| GAAACTGCCGTGGATGAAAG+GGG | + | chr7_1:65120489-65120508 | None:intergenic | 50.0% | |
| CGAAACTGCCGTGGATGAAA+GGG | + | chr7_1:65120490-65120509 | None:intergenic | 50.0% | |
| ACGAAACTGCCGTGGATGAA+AGG | + | chr7_1:65120491-65120510 | None:intergenic | 50.0% | |
| ! | TGTGCCGTTGTTGGGAATTC+TGG | - | chr7_1:65120514-65120533 | Msa1030880:intron | 50.0% |
| ! | GTGCCGTTGTTGGGAATTCT+GGG | - | chr7_1:65120515-65120534 | Msa1030880:intron | 50.0% |
| TGCCGTTGTTGGGAATTCTG+GGG | - | chr7_1:65120516-65120535 | Msa1030880:intron | 50.0% | |
| GTCCCCAGAATTCCCAACAA+CGG | + | chr7_1:65120521-65120540 | None:intergenic | 50.0% | |
| CAGCACCTCTCACAACTAGA+CGG | + | chr7_1:65120833-65120852 | None:intergenic | 50.0% | |
| ! | CCAATTGCAAGTGATGGCGA+GGG | + | chr7_1:65120991-65121010 | None:intergenic | 50.0% |
| GAGCAGCCAATTGCAAGTGA+TGG | + | chr7_1:65120997-65121016 | None:intergenic | 50.0% | |
| ACCAGGCATAACCCTTCACA+CGG | + | chr7_1:65121182-65121201 | None:intergenic | 50.0% | |
| TGGTTGAATGCCTTGGCACT+AGG | - | chr7_1:65121303-65121322 | Msa1030880:intron | 50.0% | |
| ! | CGTGTTGGCAAAGTGCAAAG+AGG | + | chr7_1:65121329-65121348 | None:intergenic | 50.0% |
| TAAATTTGGGGAGGGTGGAG+GGG | + | chr7_1:65121378-65121397 | None:intergenic | 50.0% | |
| GTAAATTTGGGGAGGGTGGA+GGG | + | chr7_1:65121379-65121398 | None:intergenic | 50.0% | |
| AGTAAATTTGGGGAGGGTGG+AGG | + | chr7_1:65121380-65121399 | None:intergenic | 50.0% | |
| GTCAGTAAATTTGGGGAGGG+TGG | + | chr7_1:65121383-65121402 | None:intergenic | 50.0% | |
| CCCTGTTAGGGATATAACGG+TGG | + | chr7_1:65121992-65122011 | None:intergenic | 50.0% | |
| !! | ACTGACTGGCTTCTTCACCA+CGG | - | chr7_1:65122027-65122046 | Msa1030880:intron | 50.0% |
| ! | TAGGAGGGTGCAAGGATAGA+GGG | + | chr7_1:65122311-65122330 | None:intergenic | 50.0% |
| ! | ATAGGAGGGTGCAAGGATAG+AGG | + | chr7_1:65122312-65122331 | None:intergenic | 50.0% |
| TTCAGGGGAGTGGTATAGCT+GGG | + | chr7_1:65122422-65122441 | None:intergenic | 50.0% | |
| TTTCAGGGGAGTGGTATAGC+TGG | + | chr7_1:65122423-65122442 | None:intergenic | 50.0% | |
| AGAATGGGGAGACAAGGATG+AGG | + | chr7_1:65122507-65122526 | None:intergenic | 50.0% | |
| GATCTAGTGCCTGACGTGAT+GGG | + | chr7_1:65122704-65122723 | None:intergenic | 50.0% | |
| !! | AAATCTGCCGATTCCAGCAG+TGG | - | chr7_1:65122855-65122874 | Msa1030880:CDS | 50.0% |
| GAACAGTCTTACACCACTGC+TGG | + | chr7_1:65122871-65122890 | None:intergenic | 50.0% | |
| TGCAAAAATTTGGCCACCCG+TGG | - | chr7_1:65122904-65122923 | Msa1030880:intron | 50.0% | |
| GCAAAAATTTGGCCACCCGT+GGG | - | chr7_1:65122905-65122924 | Msa1030880:intron | 50.0% | |
| AATGCTTGCAAGGTCGACCA+TGG | + | chr7_1:65123009-65123028 | None:intergenic | 50.0% | |
| TTATCGGGATAGCTGCTAGC+TGG | - | chr7_1:65123232-65123251 | Msa1030880:intron | 50.0% | |
| !! | CAAGGTATTGTACTGCGTCG+AGG | - | chr7_1:65123617-65123636 | Msa1030880:intron | 50.0% |
| ACCCACCATTCAGTGTATCC+TGG | + | chr7_1:65123725-65123744 | None:intergenic | 50.0% | |
| ACTCCCCAATGAGATCCAAG+AGG | - | chr7_1:65124015-65124034 | Msa1030880:intron | 50.0% | |
| CCTCCTCTTGGATCTCATTG+GGG | + | chr7_1:65124021-65124040 | None:intergenic | 50.0% | |
| GCCTCCTCTTGGATCTCATT+GGG | + | chr7_1:65124022-65124041 | None:intergenic | 50.0% | |
| TGCCTCCTCTTGGATCTCAT+TGG | + | chr7_1:65124023-65124042 | None:intergenic | 50.0% | |
| AGTTCTGCTGATAAGGCTGG+TGG | - | chr7_1:65124113-65124132 | Msa1030880:intron | 50.0% | |
| GCTGATAAGGCTGGTGGTAA+AGG | - | chr7_1:65124119-65124138 | Msa1030880:intron | 50.0% | |
| GCTGGTGGTAAAGGACAGTT+TGG | - | chr7_1:65124128-65124147 | Msa1030880:intron | 50.0% | |
| TTGTAAGGTGTGGGGCAATG+TGG | - | chr7_1:65124154-65124173 | Msa1030880:intron | 50.0% | |
| ATGTGGACCCAGACAAAAGC+GGG | - | chr7_1:65124171-65124190 | Msa1030880:intron | 50.0% | |
| !! | GAAATAGGCCCGCTTTTGTC+TGG | + | chr7_1:65124182-65124201 | None:intergenic | 50.0% |
| GACAAAAGCGGGCCTATTTC+AGG | - | chr7_1:65124182-65124201 | Msa1030880:intron | 50.0% | |
| ! | ACTCTCACGTTTTCCCTCGA+TGG | + | chr7_1:65124558-65124577 | None:intergenic | 50.0% |
| GTCCACTGTGAAGCAATGCG+TGG | - | chr7_1:65118482-65118501 | Msa1030880:three_prime_UTR | 55.0% | |
| !! | CAGGTTGAGTGCTGGTTCGT+AGG | + | chr7_1:65119233-65119252 | None:intergenic | 55.0% |
| CTACGAACCAGCACTCAACC+TGG | - | chr7_1:65119231-65119250 | Msa1030880:CDS | 55.0% | |
| ! | CAAGTGCTGTTGGTGCCTTC+AGG | + | chr7_1:65119930-65119949 | None:intergenic | 55.0% |
| !! | CTGAAGGCACCAACAGCACT+TGG | - | chr7_1:65119928-65119947 | Msa1030880:intron | 55.0% |
| TTGACGTTCGTCCTGGTGGT+TGG | - | chr7_1:65120263-65120282 | Msa1030880:intron | 55.0% | |
| TGACGTTCGTCCTGGTGGTT+GGG | - | chr7_1:65120264-65120283 | Msa1030880:intron | 55.0% | |
| ! | GGATGAAAGGGGGGTTTTGC+GGG | + | chr7_1:65120478-65120497 | None:intergenic | 55.0% |
| AACTGCCGTGGATGAAAGGG+GGG | + | chr7_1:65120487-65120506 | None:intergenic | 55.0% | |
| GCACAAGTACGAAACTGCCG+TGG | + | chr7_1:65120499-65120518 | None:intergenic | 55.0% | |
| CAACGAGGCCCCTGTTAATG+AGG | - | chr7_1:65120597-65120616 | Msa1030880:intron | 55.0% | |
| GTGACCCAGAATCTCATGCG+TGG | + | chr7_1:65120943-65120962 | None:intergenic | 55.0% | |
| ! | ATTGCAAGTGATGGCGAGGG+TGG | + | chr7_1:65120988-65121007 | None:intergenic | 55.0% |
| CCCTCGCCATCACTTGCAAT+TGG | - | chr7_1:65120988-65121007 | Msa1030880:intron | 55.0% | |
| ! | GCCAATTGCAAGTGATGGCG+AGG | + | chr7_1:65120992-65121011 | None:intergenic | 55.0% |
| CCAGGCATAACCCTTCACAC+GGG | + | chr7_1:65121181-65121200 | None:intergenic | 55.0% | |
| TGCAAAGAGGCCTAGTGCCA+AGG | + | chr7_1:65121316-65121335 | None:intergenic | 55.0% | |
| !! | CTGACTGGCTTCTTCACCAC+GGG | - | chr7_1:65122028-65122047 | Msa1030880:intron | 55.0% |
| !! | TGACTGGCTTCTTCACCACG+GGG | - | chr7_1:65122029-65122048 | Msa1030880:intron | 55.0% |
| CAATAAATGGGAGGACCCCG+TGG | + | chr7_1:65122047-65122066 | None:intergenic | 55.0% | |
| CACGGGGTCCTCCCATTTAT+TGG | - | chr7_1:65122045-65122064 | Msa1030880:intron | 55.0% | |
| ! | AGGAGGGTGCAAGGATAGAG+GGG | + | chr7_1:65122310-65122329 | None:intergenic | 55.0% |
| TCAGGGGAGTGGTATAGCTG+GGG | + | chr7_1:65122421-65122440 | None:intergenic | 55.0% | |
| ! | AGTGCCTGACGTGATGGGAT+AGG | + | chr7_1:65122699-65122718 | None:intergenic | 55.0% |
| GGATCTAGTGCCTGACGTGA+TGG | + | chr7_1:65122705-65122724 | None:intergenic | 55.0% | |
| CCCCAATGAGATCCAAGAGG+AGG | - | chr7_1:65124018-65124037 | Msa1030880:intron | 55.0% | |
| GATCCAAGAGGAGGCAAGAC+TGG | - | chr7_1:65124027-65124046 | Msa1030880:intron | 55.0% | |
| TGACCAGTCTTGCCTCCTCT+TGG | + | chr7_1:65124033-65124052 | None:intergenic | 55.0% | |
| GTATTGCGGCTAGCAGAGCA+TGG | - | chr7_1:65124518-65124537 | Msa1030880:CDS | 55.0% | |
| !! | GAGAGGTGCTGCTCGCAACA+TGG | - | chr7_1:65120842-65120861 | Msa1030880:intron | 60.0% |
| CCCGTGTGAAGGGTTATGCC+TGG | - | chr7_1:65121178-65121197 | Msa1030880:intron | 60.0% | |
| ! | GGAGGGTGCAAGGATAGAGG+GGG | + | chr7_1:65122309-65122328 | None:intergenic | 60.0% |
| CAGGGGAGTGGTATAGCTGG+GGG | + | chr7_1:65122420-65122439 | None:intergenic | 60.0% | |
| TGGGCCTATCCCATCACGTC+AGG | - | chr7_1:65122692-65122711 | Msa1030880:CDS | 60.0% | |
| ! | GTACTGCGTCGAGGTGCCAA+AGG | - | chr7_1:65123626-65123645 | Msa1030880:intron | 60.0% |
| ! | CGTCGAGGTGCCAAAGGAAC+TGG | - | chr7_1:65123632-65123651 | Msa1030880:intron | 60.0% |
| GCCAAGCACATGCAGCAGCT+TGG | - | chr7_1:65124078-65124097 | Msa1030880:intron | 60.0% | |
| GCCAAGCTGCTGCATGTGCT+TGG | + | chr7_1:65124082-65124101 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 65118106 | 65124861 | 65118106 | ID=Msa1030880;Name=Msa1030880 |
| chr7_1 | mRNA | 65118106 | 65124861 | 65118106 | ID=Msa1030880-mRNA-1;Parent=Msa1030880;Name=Msa1030880-mRNA-1;_AED=0.09;_eAED=0.09;_QI=122|1|1|1|1|1|11|467|476 |
| chr7_1 | exon | 65118106 | 65118965 | 65118106 | ID=Msa1030880-mRNA-1:exon:14417;Parent=Msa1030880-mRNA-1 |
| chr7_1 | exon | 65119044 | 65119125 | 65119044 | ID=Msa1030880-mRNA-1:exon:14416;Parent=Msa1030880-mRNA-1 |
| chr7_1 | exon | 65119229 | 65119377 | 65119229 | ID=Msa1030880-mRNA-1:exon:14415;Parent=Msa1030880-mRNA-1 |
| chr7_1 | exon | 65119505 | 65119563 | 65119505 | ID=Msa1030880-mRNA-1:exon:14414;Parent=Msa1030880-mRNA-1 |
| chr7_1 | exon | 65122082 | 65122172 | 65122082 | ID=Msa1030880-mRNA-1:exon:14413;Parent=Msa1030880-mRNA-1 |
| chr7_1 | exon | 65122349 | 65122550 | 65122349 | ID=Msa1030880-mRNA-1:exon:14412;Parent=Msa1030880-mRNA-1 |
| chr7_1 | exon | 65122650 | 65122741 | 65122650 | ID=Msa1030880-mRNA-1:exon:14411;Parent=Msa1030880-mRNA-1 |
| chr7_1 | exon | 65122829 | 65122906 | 65122829 | ID=Msa1030880-mRNA-1:exon:14410;Parent=Msa1030880-mRNA-1 |
| chr7_1 | exon | 65123017 | 65123103 | 65123017 | ID=Msa1030880-mRNA-1:exon:14409;Parent=Msa1030880-mRNA-1 |
| chr7_1 | exon | 65124464 | 65124543 | 65124464 | ID=Msa1030880-mRNA-1:exon:14408;Parent=Msa1030880-mRNA-1 |
| chr7_1 | exon | 65124622 | 65124861 | 65124622 | ID=Msa1030880-mRNA-1:exon:14407;Parent=Msa1030880-mRNA-1 |
| chr7_1 | five_prime_UTR | 65124740 | 65124861 | 65124740 | ID=Msa1030880-mRNA-1:five_prime_utr;Parent=Msa1030880-mRNA-1 |
| chr7_1 | CDS | 65124622 | 65124739 | 65124622 | ID=Msa1030880-mRNA-1:cds;Parent=Msa1030880-mRNA-1 |
| chr7_1 | CDS | 65124464 | 65124543 | 65124464 | ID=Msa1030880-mRNA-1:cds;Parent=Msa1030880-mRNA-1 |
| chr7_1 | CDS | 65123017 | 65123103 | 65123017 | ID=Msa1030880-mRNA-1:cds;Parent=Msa1030880-mRNA-1 |
| chr7_1 | CDS | 65122829 | 65122906 | 65122829 | ID=Msa1030880-mRNA-1:cds;Parent=Msa1030880-mRNA-1 |
| chr7_1 | CDS | 65122650 | 65122741 | 65122650 | ID=Msa1030880-mRNA-1:cds;Parent=Msa1030880-mRNA-1 |
| chr7_1 | CDS | 65122349 | 65122550 | 65122349 | ID=Msa1030880-mRNA-1:cds;Parent=Msa1030880-mRNA-1 |
| chr7_1 | CDS | 65122082 | 65122172 | 65122082 | ID=Msa1030880-mRNA-1:cds;Parent=Msa1030880-mRNA-1 |
| chr7_1 | CDS | 65119505 | 65119563 | 65119505 | ID=Msa1030880-mRNA-1:cds;Parent=Msa1030880-mRNA-1 |
| chr7_1 | CDS | 65119229 | 65119377 | 65119229 | ID=Msa1030880-mRNA-1:cds;Parent=Msa1030880-mRNA-1 |
| chr7_1 | CDS | 65119044 | 65119125 | 65119044 | ID=Msa1030880-mRNA-1:cds;Parent=Msa1030880-mRNA-1 |
| chr7_1 | CDS | 65118573 | 65118965 | 65118573 | ID=Msa1030880-mRNA-1:cds;Parent=Msa1030880-mRNA-1 |
| chr7_1 | three_prime_UTR | 65118106 | 65118572 | 65118106 | ID=Msa1030880-mRNA-1:three_prime_utr;Parent=Msa1030880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
