Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086120 | KEH43655.1 | 85.000 | 620 | 34 | 4 | 1 | 563 | 1 | 618 | 0.0 | 1046 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086120 | sp|Q9XIG1|U80B1_ARATH | 76.765 | 340 | 76 | 2 | 227 | 563 | 276 | 615 | 0.0 | 568 |
| Msa0086120 | sp|Q9XIG1|U80B1_ARATH | 48.899 | 227 | 106 | 5 | 1 | 226 | 1 | 218 | 2.07e-51 | 189 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086120 | A0A072W016 | 85.000 | 620 | 34 | 4 | 1 | 563 | 1 | 618 | 0.0 | 1046 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0038270 | Msa0086120 | 0.824274 | 8.820818e-54 | -8.615850e-47 |
| Msa0086120 | Msa0106080 | 0.805918 | 1.058575e-49 | -8.615850e-47 |
| Msa0086120 | Msa0132500 | 0.824145 | 9.460123e-54 | -8.615850e-47 |
| Msa0086120 | Msa0194060 | -0.840539 | 8.182462e-58 | -8.615850e-47 |
| Msa0086120 | Msa0226250 | 0.814606 | 1.414603e-51 | -8.615850e-47 |
| Msa0086120 | Msa0331590 | 0.803201 | 3.902416e-49 | -8.615850e-47 |
| Msa0086120 | Msa0423090 | 0.811036 | 8.557263e-51 | -8.615850e-47 |
| Msa0086120 | Msa0612870 | -0.805311 | 1.419329e-49 | -8.615850e-47 |
| Msa0086120 | Msa0723140 | 0.804311 | 2.296298e-49 | -8.615850e-47 |
| Msa0086120 | Msa0769390 | 0.807213 | 5.640157e-50 | -8.615850e-47 |
| Msa0086120 | Msa0789690 | 0.810221 | 1.284084e-50 | -8.615850e-47 |
| Msa0086120 | Msa0832370 | 0.801757 | 7.743297e-49 | -8.615850e-47 |
| Msa0086120 | Msa1033440 | -0.804137 | 2.495808e-49 | -8.615850e-47 |
| Msa0086120 | Msa1073110 | -0.815435 | 9.256867e-52 | -8.615850e-47 |
| Msa0086120 | Msa1083410 | 0.823108 | 1.654039e-53 | -8.615850e-47 |
| Msa0086120 | Msa1128160 | 0.805967 | 1.033730e-49 | -8.615850e-47 |
| Msa0086120 | Msa1155470 | 0.813536 | 2.435505e-51 | -8.615850e-47 |
| Msa0086120 | Msa1165360 | 0.805843 | 1.097373e-49 | -8.615850e-47 |
| Msa0086120 | Msa1257870 | -0.823442 | 1.382291e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086120 | MtrunA17_Chr1g0201761 | 84.051 | 627 | 34 | 5 | 1 | 563 | 1 | 625 | 0.0 | 1039 |
| Msa0086120 | MtrunA17_Chr4g0010281 | 47.593 | 540 | 204 | 10 | 56 | 527 | 71 | 599 | 2.96e-164 | 481 |
| Msa0086120 | MtrunA17_Chr4g0010291 | 58.307 | 319 | 129 | 2 | 209 | 525 | 279 | 595 | 7.51e-135 | 405 |
| Msa0086120 | MtrunA17_Chr4g0010291 | 46.795 | 156 | 67 | 4 | 82 | 228 | 93 | 241 | 6.21e-32 | 130 |
| Msa0086120 | MtrunA17_Chr7g0248971 | 58.497 | 306 | 119 | 3 | 227 | 527 | 270 | 572 | 7.55e-132 | 397 |
| Msa0086120 | MtrunA17_Chr7g0248971 | 35.784 | 204 | 119 | 3 | 30 | 228 | 18 | 214 | 4.02e-25 | 109 |
| Msa0086120 | MtrunA17_Chr0c19g0493781 | 55.137 | 292 | 116 | 3 | 248 | 527 | 3 | 291 | 6.43e-117 | 349 |
| Msa0086120 | MtrunA17_Chr7g0224211 | 58.219 | 146 | 61 | 0 | 382 | 527 | 56 | 201 | 1.03e-54 | 184 |
| Msa0086120 | MtrunA17_Chr0c19g0493791 | 47.200 | 125 | 62 | 2 | 106 | 228 | 92 | 214 | 4.79e-26 | 108 |
| Msa0086120 | MtrunA17_Chr2g0301441 | 31.111 | 270 | 129 | 10 | 314 | 530 | 231 | 496 | 2.34e-21 | 97.4 |
| Msa0086120 | MtrunA17_Chr7g0224201 | 51.111 | 45 | 22 | 0 | 325 | 369 | 27 | 71 | 2.75e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086120 | AT1G43620.7 | 76.765 | 340 | 76 | 2 | 227 | 563 | 276 | 615 | 0.0 | 568 |
| Msa0086120 | AT1G43620.7 | 48.899 | 227 | 106 | 5 | 1 | 226 | 1 | 218 | 2.10e-52 | 189 |
| Msa0086120 | AT1G43620.1 | 76.765 | 340 | 76 | 2 | 227 | 563 | 276 | 615 | 0.0 | 568 |
| Msa0086120 | AT1G43620.1 | 48.899 | 227 | 106 | 5 | 1 | 226 | 1 | 218 | 2.10e-52 | 189 |
| Msa0086120 | AT1G43620.3 | 76.765 | 340 | 76 | 2 | 227 | 563 | 276 | 615 | 0.0 | 568 |
| Msa0086120 | AT1G43620.3 | 48.899 | 227 | 106 | 5 | 1 | 226 | 1 | 218 | 2.10e-52 | 189 |
| Msa0086120 | AT1G43620.5 | 76.765 | 340 | 76 | 2 | 227 | 563 | 276 | 615 | 0.0 | 568 |
| Msa0086120 | AT1G43620.5 | 48.899 | 227 | 106 | 5 | 1 | 226 | 1 | 218 | 2.10e-52 | 189 |
| Msa0086120 | AT1G43620.2 | 76.765 | 340 | 76 | 2 | 227 | 563 | 276 | 615 | 0.0 | 568 |
| Msa0086120 | AT1G43620.2 | 48.899 | 227 | 106 | 5 | 1 | 226 | 1 | 218 | 2.10e-52 | 189 |
| Msa0086120 | AT1G43620.6 | 76.765 | 340 | 76 | 2 | 227 | 563 | 276 | 615 | 0.0 | 568 |
| Msa0086120 | AT1G43620.6 | 48.899 | 227 | 106 | 5 | 1 | 226 | 1 | 218 | 2.10e-52 | 189 |
| Msa0086120 | AT1G43620.4 | 76.765 | 340 | 76 | 2 | 227 | 563 | 276 | 615 | 0.0 | 568 |
| Msa0086120 | AT1G43620.4 | 48.899 | 227 | 106 | 5 | 1 | 226 | 1 | 218 | 2.10e-52 | 189 |
| Msa0086120 | AT1G43620.8 | 76.765 | 340 | 76 | 2 | 227 | 563 | 104 | 443 | 0.0 | 562 |
| Msa0086120 | AT1G43620.8 | 80.000 | 40 | 8 | 0 | 187 | 226 | 7 | 46 | 1.92e-13 | 73.2 |
| Msa0086120 | AT3G07020.3 | 46.654 | 508 | 207 | 5 | 82 | 525 | 22 | 529 | 3.81e-158 | 463 |
| Msa0086120 | AT3G07020.1 | 44.224 | 554 | 244 | 6 | 37 | 525 | 58 | 611 | 3.94e-158 | 466 |
| Msa0086120 | AT3G07020.2 | 44.224 | 554 | 244 | 6 | 37 | 525 | 58 | 611 | 4.49e-158 | 466 |
| Msa0086120 | AT5G24750.1 | 33.628 | 113 | 62 | 1 | 418 | 517 | 391 | 503 | 7.86e-17 | 84.0 |
Find 166 sgRNAs with CRISPR-Local
Find 523 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACCACCTCCTTTATATTT+TGG | 0.149752 | 1_2:-66699930 | Msa0086120:CDS |
| ACCACTCAAGTCCTCTTAAT+TGG | 0.228017 | 1_2:-66697562 | Msa0086120:CDS |
| AGAAGTGGTAGAAGATAAAA+AGG | 0.240804 | 1_2:-66705081 | Msa0086120:CDS |
| CTTGATCTTGATACTTGAAT+TGG | 0.259606 | 1_2:-66705438 | Msa0086120:five_prime_UTR |
| TCTTTGGAGATCAATTCTTT+TGG | 0.269484 | 1_2:-66697907 | Msa0086120:CDS |
| TTTCTCAAAGTGCTGGTTAT+TGG | 0.284056 | 1_2:-66700759 | Msa0086120:CDS |
| TCAACATTGAGCTCGGATAT+TGG | 0.298508 | 1_2:+66697842 | None:intergenic |
| TTCTCAAAGTGCTGGTTATT+GGG | 0.310436 | 1_2:-66700758 | Msa0086120:intron |
| ACAACAATAGTCCCATTCTT+TGG | 0.313820 | 1_2:-66697923 | Msa0086120:CDS |
| TGGTGTAAATTTCTATCCTC+TGG | 0.322328 | 1_2:-66702685 | Msa0086120:CDS |
| GACCGAGGTTGGGGCAATCT+AGG | 0.331029 | 1_2:-66698881 | Msa0086120:CDS |
| TTGTCCATACCACTTGGTTT+TGG | 0.340490 | 1_2:+66700459 | None:intergenic |
| CTGACAGTCTGTCCAATATT+AGG | 0.347761 | 1_2:+66703702 | None:intergenic |
| GGCTCTTTAGTTGATGTTGT+TGG | 0.348548 | 1_2:-66700020 | Msa0086120:CDS |
| AGAATGGTAGCATAATGTTT+TGG | 0.360248 | 1_2:-66697402 | Msa0086120:three_prime_UTR |
| AATAACAACAGATGTTATAT+TGG | 0.364034 | 1_2:-66698939 | Msa0086120:CDS |
| TACATCTTGCTGAAGCCCTT+GGG | 0.364963 | 1_2:-66701099 | Msa0086120:CDS |
| CTCCCAAATCCAAAATATAA+AGG | 0.373017 | 1_2:+66699921 | None:intergenic |
| TCGAAGGCATGACCTAATAT+TGG | 0.373430 | 1_2:-66703714 | Msa0086120:CDS |
| TTGAGCTCGGATATTGGAAT+TGG | 0.375164 | 1_2:+66697848 | None:intergenic |
| GGGAATTATAGACCGAGGTT+GGG | 0.375715 | 1_2:-66698891 | Msa0086120:CDS |
| CATTGCATCACAGCTCCTAT+TGG | 0.379859 | 1_2:-66703809 | Msa0086120:intron |
| TTGAGGAATGCCCTCATGAT+TGG | 0.382520 | 1_2:-66698327 | Msa0086120:CDS |
| TTATAGTTGGAAATTCAAAA+AGG | 0.383463 | 1_2:-66705406 | Msa0086120:five_prime_UTR |
| GATACTTGAATTGGGTTATG+AGG | 0.386739 | 1_2:-66705429 | Msa0086120:five_prime_UTR |
| TTGGGTTATGAGGTTATAGT+TGG | 0.390425 | 1_2:-66705419 | Msa0086120:five_prime_UTR |
| TGACGGTTCACCTTCATCTA+AGG | 0.395462 | 1_2:-66704988 | Msa0086120:CDS |
| GTTGGCAGCAGTAGCTCATC+AGG | 0.395951 | 1_2:+66697608 | None:intergenic |
| GTAGTGGTAGTTCAAATTAA+TGG | 0.397082 | 1_2:+66705475 | None:intergenic |
| AAGAAGTAACTTCCGATGAT+TGG | 0.403909 | 1_2:+66704955 | None:intergenic |
| ACTAAAAGAGACAGAACAAC+GGG | 0.412444 | 1_2:-66698912 | Msa0086120:CDS |
| TTTGTTCTTTCTGAGGTTGT+TGG | 0.414603 | 1_2:-66705265 | Msa0086120:five_prime_UTR |
| AAGACATTTGTAAGGTTAGC+TGG | 0.419214 | 1_2:-66702705 | Msa0086120:CDS |
| AAGAATTGATCTCCAAAGAA+TGG | 0.420179 | 1_2:+66697911 | None:intergenic |
| ACGGCTACAGGATTAAAATC+TGG | 0.420333 | 1_2:-66698132 | Msa0086120:CDS |
| GGCCATTGCGAAGAGACTTC+AGG | 0.423276 | 1_2:-66703258 | Msa0086120:intron |
| AATGTTTACTTGCAGGAGTA+TGG | 0.427510 | 1_2:-66702762 | Msa0086120:intron |
| AGGTGAAGTAGTAGTGGTAG+TGG | 0.431508 | 1_2:+66705459 | None:intergenic |
| TTGATCTTGATACTTGAATT+GGG | 0.434032 | 1_2:-66705437 | Msa0086120:five_prime_UTR |
| CTACCGACTCTTCAAAAGAT+TGG | 0.435951 | 1_2:+66703381 | None:intergenic |
| CGGCTACAGGATTAAAATCT+GGG | 0.439445 | 1_2:-66698131 | Msa0086120:CDS |
| GTACATCTTGCTGAAGCCCT+TGG | 0.442502 | 1_2:-66701100 | Msa0086120:CDS |
| ATCTCATCTTCAGCTATTAG+TGG | 0.443955 | 1_2:+66703773 | None:intergenic |
| ATATGCATTTCCCCACCCTT+TGG | 0.444072 | 1_2:-66700788 | Msa0086120:CDS |
| GGGTTTCTCTCAGTTCCAAT+AGG | 0.445007 | 1_2:+66703794 | None:intergenic |
| CCTCCTATACAAAATGTTTG+AGG | 0.445037 | 1_2:+66697277 | None:intergenic |
| TGATTGTGATGGGTTGTAAT+GGG | 0.449292 | 1_2:-66705121 | Msa0086120:exon |
| CTTTGTGTTTCAATGACTGT+TGG | 0.451980 | 1_2:-66705357 | Msa0086120:five_prime_UTR |
| GAACAAAACACAAAGTTCCT+TGG | 0.452755 | 1_2:+66705281 | None:intergenic |
| GGAGCGGGAACCACGGCTAC+AGG | 0.453883 | 1_2:-66698144 | Msa0086120:CDS |
| TAATTGTGGATCTACTGATA+TGG | 0.454178 | 1_2:-66700614 | Msa0086120:CDS |
| CTCCTATACAAAATGTTTGA+GGG | 0.463892 | 1_2:+66697278 | None:intergenic |
| GCGCGTGTTTCTCAAAGTGC+TGG | 0.467890 | 1_2:-66700766 | Msa0086120:CDS |
| CTAATTTCAAGACATTTGTA+AGG | 0.470699 | 1_2:-66702713 | Msa0086120:CDS |
| GGGGAATTATAGACCGAGGT+TGG | 0.470942 | 1_2:-66698892 | Msa0086120:CDS |
| CTTCCCCTCTCCTTAGATGA+AGG | 0.474030 | 1_2:+66704978 | None:intergenic |
| GTGATTGTGATGGGTTGTAA+TGG | 0.478088 | 1_2:-66705122 | Msa0086120:exon |
| CAAATTGTCATACTTGTGGT+TGG | 0.479952 | 1_2:-66703308 | Msa0086120:CDS |
| AAGAATGGGACTATTGTTGT+TGG | 0.485641 | 1_2:+66697926 | None:intergenic |
| AGAATTGATCTCCAAAGAAT+GGG | 0.487173 | 1_2:+66697912 | None:intergenic |
| TTTGTGTTTCAATGACTGTT+GGG | 0.487621 | 1_2:-66705356 | Msa0086120:five_prime_UTR |
| TCAGGTGAAATCTCGGACAA+TGG | 0.496008 | 1_2:-66697699 | Msa0086120:intron |
| AGGAGTATGGTCATCGCGTT+AGG | 0.502334 | 1_2:-66702749 | Msa0086120:CDS |
| GGAATTATAGACCGAGGTTG+GGG | 0.503439 | 1_2:-66698890 | Msa0086120:CDS |
| AACTTTCTGTTATTACAGAA+TGG | 0.503458 | 1_2:-66697418 | Msa0086120:three_prime_UTR |
| CAATGACTGTTGGGTAGTAG+TGG | 0.507124 | 1_2:-66705347 | Msa0086120:five_prime_UTR |
| CTCTTCGCAATGGCCACAAA+AGG | 0.507208 | 1_2:+66703266 | None:intergenic |
| ACCGAGGTTGGGGCAATCTA+GGG | 0.507600 | 1_2:-66698880 | Msa0086120:CDS |
| GCAGCTGTCTTATATAATTG+TGG | 0.509774 | 1_2:-66700628 | Msa0086120:intron |
| CAGGTGCATCATGGTGGAGC+GGG | 0.512653 | 1_2:-66698159 | Msa0086120:CDS |
| ATGTATTTCAGGTGAAATCT+CGG | 0.519127 | 1_2:-66697706 | Msa0086120:intron |
| CTGATTATTGTGATTGTGAT+GGG | 0.520454 | 1_2:-66705131 | Msa0086120:exon |
| AAGATGAGGACTCCACATAT+AGG | 0.521439 | 1_2:+66700485 | None:intergenic |
| GAAACACGCGCCAAAGGGTG+GGG | 0.525242 | 1_2:+66700778 | None:intergenic |
| TTTGAGAAACACGCGCCAAA+GGG | 0.526660 | 1_2:+66700773 | None:intergenic |
| GGTGTAAATTTCTATCCTCT+GGG | 0.527341 | 1_2:-66702684 | Msa0086120:CDS |
| TCCTCGTCTTCCACATGAGA+TGG | 0.530855 | 1_2:+66697584 | None:intergenic |
| TCTCATCTTCAGCTATTAGT+GGG | 0.530855 | 1_2:+66703774 | None:intergenic |
| ATTGAAACACAAAGAACGTT+CGG | 0.531146 | 1_2:+66705366 | None:intergenic |
| ATTTACCAACTGCCTATATG+TGG | 0.534491 | 1_2:-66700497 | Msa0086120:CDS |
| CAATTCAAGTATCAAGATCA+AGG | 0.536318 | 1_2:+66705439 | None:intergenic |
| AACAACACCACTTTGCAAGT+TGG | 0.537111 | 1_2:+66697531 | None:intergenic |
| ACTACACATTTACCTCTGGC+TGG | 0.538740 | 1_2:+66697789 | None:intergenic |
| GGGTGGTGATCCTCGAGTAT+TGG | 0.539944 | 1_2:-66702664 | Msa0086120:CDS |
| TACATGCTGAAGTATGCAAT+AGG | 0.541098 | 1_2:+66700537 | None:intergenic |
| GTTACAAATTGTCATACTTG+TGG | 0.543374 | 1_2:-66703312 | Msa0086120:CDS |
| CAGAAAAGAGAGGGCTTCGA+AGG | 0.543506 | 1_2:-66703730 | Msa0086120:CDS |
| ACAAATTAAACTCACGTCCA+TGG | 0.545172 | 1_2:+66701049 | None:intergenic |
| ATTGTGAAGAAGATGTGAAT+AGG | 0.545573 | 1_2:+66701073 | None:intergenic |
| TGAACATTTATTGTTAGTCA+AGG | 0.546877 | 1_2:+66697331 | None:intergenic |
| TTCACCTTCATCTAAGGAGA+GGG | 0.548305 | 1_2:-66704982 | Msa0086120:CDS |
| AGAAACACGCGCCAAAGGGT+GGG | 0.550349 | 1_2:+66700777 | None:intergenic |
| TCGGATATTGGAATTGGAGC+AGG | 0.550790 | 1_2:+66697854 | None:intergenic |
| CTTTGAGAAACACGCGCCAA+AGG | 0.550897 | 1_2:+66700772 | None:intergenic |
| AATCCAAAATATAAAGGAGG+TGG | 0.552388 | 1_2:+66699927 | None:intergenic |
| GTTTCCTCAATGTTCTGCTG+TGG | 0.552665 | 1_2:-66698302 | Msa0086120:intron |
| ACTGATTATTGTGATTGTGA+TGG | 0.554723 | 1_2:-66705132 | Msa0086120:exon |
| GAGAAACACGCGCCAAAGGG+TGG | 0.555092 | 1_2:+66700776 | None:intergenic |
| ATACTTGTGGTTGGAACTAG+AGG | 0.557305 | 1_2:-66703299 | Msa0086120:CDS |
| TAAATTCTCAACATTGAGCT+CGG | 0.559134 | 1_2:+66697835 | None:intergenic |
| GGTGATCCTCGAGTATTGGC+AGG | 0.560631 | 1_2:-66702660 | Msa0086120:CDS |
| TGGTGTTGTTTGCCTTGTGG+TGG | 0.568892 | 1_2:-66697518 | Msa0086120:CDS |
| TTGTTGGTTACTGTTTCTTG+AGG | 0.570659 | 1_2:-66700004 | Msa0086120:CDS |
| TGAGCATTTGTGCAAAGAAG+TGG | 0.573880 | 1_2:-66705096 | Msa0086120:CDS |
| TCCCTAGATTGCCCCAACCT+CGG | 0.574820 | 1_2:+66698879 | None:intergenic |
| AGATCAAGGTGAAGTAGTAG+TGG | 0.575270 | 1_2:+66705453 | None:intergenic |
| CAGACTGTCAGAGGATGAGA+AGG | 0.575642 | 1_2:-66703690 | Msa0086120:intron |
| ACATCTTCTTCACAATGCCA+TGG | 0.575887 | 1_2:-66701066 | Msa0086120:CDS |
| CTTACATGAAGAGCGTTGCT+AGG | 0.576221 | 1_2:-66697216 | Msa0086120:three_prime_UTR |
| CATGAGGGCATTCCTCAAGA+AGG | 0.582608 | 1_2:+66698332 | None:intergenic |
| TTTGAAGAGTCGGTAGCGAG+CGG | 0.585117 | 1_2:-66703374 | Msa0086120:CDS |
| TCTTCCACATGAGATGGAGT+TGG | 0.586284 | 1_2:+66697590 | None:intergenic |
| GCAGCAGTAGCTCATCAGGC+AGG | 0.587583 | 1_2:+66697612 | None:intergenic |
| AAGTGGTGTTGTTTGCCTTG+TGG | 0.588246 | 1_2:-66697521 | Msa0086120:CDS |
| ATTCAAATAAATCAGTTCCA+CGG | 0.594368 | 1_2:-66703334 | Msa0086120:CDS |
| TCCTATACAAAATGTTTGAG+GGG | 0.595295 | 1_2:+66697279 | None:intergenic |
| GGAGAGGGGAAGCCAATCAT+CGG | 0.595295 | 1_2:-66704967 | Msa0086120:CDS |
| CTGATATGGTGGGGAATGCG+AGG | 0.599449 | 1_2:-66700600 | Msa0086120:CDS |
| ATGAATTTGCAGGTGCATCA+TGG | 0.601724 | 1_2:-66698168 | Msa0086120:intron |
| ACATCTTGCTGAAGCCCTTG+GGG | 0.602070 | 1_2:-66701098 | Msa0086120:CDS |
| TGCCTGAAGTCTCTTCGCAA+TGG | 0.604421 | 1_2:+66703256 | None:intergenic |
| TTGTGGATCTACTGATATGG+TGG | 0.606875 | 1_2:-66700611 | Msa0086120:CDS |
| TGAGGAAACAGCCAATCATG+AGG | 0.607103 | 1_2:+66698316 | None:intergenic |
| GGGTGGGGAAATGCATATGT+TGG | 0.608825 | 1_2:+66700793 | None:intergenic |
| GATCAATGACAGAAAAGAGA+GGG | 0.613379 | 1_2:-66703739 | Msa0086120:CDS |
| GATAAGTTGGTTAGTGTGAG+AGG | 0.616291 | 1_2:-66705038 | Msa0086120:CDS |
| AAGTTGATTGAGAGTGAAGA+TGG | 0.624389 | 1_2:-66697668 | Msa0086120:CDS |
| GCAGTAGCTCATCAGGCAGG+TGG | 0.624829 | 1_2:+66697615 | None:intergenic |
| AATATTGGACAGACTGTCAG+AGG | 0.625882 | 1_2:-66703699 | Msa0086120:CDS |
| AGATGTGAATAGGCACCCCA+AGG | 0.626183 | 1_2:+66701083 | None:intergenic |
| TGTGGATCTACTGATATGGT+GGG | 0.628477 | 1_2:-66700610 | Msa0086120:CDS |
| TCATGGTGGAGCGGGAACCA+CGG | 0.634029 | 1_2:-66698151 | Msa0086120:CDS |
| AAAATTCATGCTCCAGCCAG+AGG | 0.634737 | 1_2:-66697801 | Msa0086120:intron |
| GGACTCCACATATAGGCAGT+TGG | 0.634912 | 1_2:+66700492 | None:intergenic |
| CTAACCACAGCAGAACATTG+AGG | 0.638399 | 1_2:+66698298 | None:intergenic |
| GCTGCCAACTCCATCTCATG+TGG | 0.640246 | 1_2:-66697594 | Msa0086120:CDS |
| GCAGGTGCATCATGGTGGAG+CGG | 0.640647 | 1_2:-66698160 | Msa0086120:intron |
| TGAGTCAAACTATCAACCAC+GGG | 0.640938 | 1_2:-66699979 | Msa0086120:CDS |
| ACCAATTAAGAGGACTTGAG+TGG | 0.645887 | 1_2:+66697561 | None:intergenic |
| GCATACTTCAGCATGTATCG+TGG | 0.647313 | 1_2:-66700531 | Msa0086120:CDS |
| CCTATACAAAATGTTTGAGG+GGG | 0.648449 | 1_2:+66697280 | None:intergenic |
| TCCATCTCATGTGGAAGACG+AGG | 0.650089 | 1_2:-66697585 | Msa0086120:CDS |
| GTAAATTTCTATCCTCTGGG+TGG | 0.653398 | 1_2:-66702681 | Msa0086120:CDS |
| GAGGAAACAGCCAATCATGA+GGG | 0.653655 | 1_2:+66698317 | None:intergenic |
| CCAAATCCAAAATATAAAGG+AGG | 0.655311 | 1_2:+66699924 | None:intergenic |
| GTTCACCTTCATCTAAGGAG+AGG | 0.656058 | 1_2:-66704983 | Msa0086120:CDS |
| AGTATGACAATTTGTAACCG+TGG | 0.656264 | 1_2:+66703317 | None:intergenic |
| AAAATCTACACACCACCACA+AGG | 0.658594 | 1_2:+66697506 | None:intergenic |
| CATCTTGTTCCAAAACCAAG+TGG | 0.659240 | 1_2:-66700468 | Msa0086120:intron |
| AGATCAATGACAGAAAAGAG+AGG | 0.660701 | 1_2:-66703740 | Msa0086120:CDS |
| TTACATCCTGCCAATACTCG+AGG | 0.661630 | 1_2:+66702654 | None:intergenic |
| GATGTGAATAGGCACCCCAA+GGG | 0.663373 | 1_2:+66701084 | None:intergenic |
| CATTGGAGAAAATCCTCCCG+TGG | 0.667741 | 1_2:+66699963 | None:intergenic |
| ATGAGTCAAACTATCAACCA+CGG | 0.669416 | 1_2:-66699980 | Msa0086120:CDS |
| CACTAAAAGAGACAGAACAA+CGG | 0.678340 | 1_2:-66698913 | Msa0086120:CDS |
| TCACCTTCATCTAAGGAGAG+GGG | 0.681765 | 1_2:-66704981 | Msa0086120:CDS |
| GGCTACAGGATTAAAATCTG+GGG | 0.686247 | 1_2:-66698130 | Msa0086120:intron |
| GTTACTTCTTTGCCACACAG+AGG | 0.697665 | 1_2:-66704942 | Msa0086120:intron |
| ATTATGTCTCAAGAAGATGA+CGG | 0.700952 | 1_2:-66705005 | Msa0086120:CDS |
| GTCAAACTATCAACCACGGG+AGG | 0.710066 | 1_2:-66699976 | Msa0086120:CDS |
| AATGAGCACAAACCTCTGTG+TGG | 0.726327 | 1_2:+66704930 | None:intergenic |
| AATTTGCAGGTGCATCATGG+TGG | 0.732739 | 1_2:-66698165 | Msa0086120:intron |
| CAACGGGGAATTATAGACCG+AGG | 0.735880 | 1_2:-66698896 | Msa0086120:CDS |
| ACTCGAGGATCACCACCCAG+AGG | 0.762040 | 1_2:+66702669 | None:intergenic |
| GTGGATCTACTGATATGGTG+GGG | 0.771351 | 1_2:-66700609 | Msa0086120:CDS |
| CTAAAAGAGACAGAACAACG+GGG | 0.829050 | 1_2:-66698911 | Msa0086120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAAATAAATTATTAAA+AGG | + | chr1_2:66700121-66700140 | None:intergenic | 0.0% |
| !! | TTAATAATTAATTTATATTT+CGG | - | chr1_2:66700141-66700160 | Msa0086120:intron | 0.0% |
| !! | TTAAAATTATATAAAAATGG+TGG | - | chr1_2:66697222-66697241 | Msa0086120:three_prime_UTR | 10.0% |
| !! | AGTTATTTAAATAATAGATA+TGG | - | chr1_2:66700965-66700984 | Msa0086120:intron | 10.0% |
| !!! | TTTAATTATATTTTTGATTC+CGG | - | chr1_2:66701608-66701627 | Msa0086120:intron | 10.0% |
| !!! | TACATTTTTTAAAAATTTAC+AGG | - | chr1_2:66701927-66701946 | Msa0086120:intron | 10.0% |
| !! | AAAATTTACAGAAAAAAAAA+AGG | + | chr1_2:66702916-66702935 | None:intergenic | 10.0% |
| !!! | ATTTTTTGTTTTTGAAAACT+TGG | - | chr1_2:66698201-66698220 | Msa0086120:intron | 15.0% |
| !!! | TATACTTTAAGAAAAAGAAA+AGG | + | chr1_2:66698497-66698516 | None:intergenic | 15.0% |
| !!! | ATACATTTTGTTATATTCAA+TGG | - | chr1_2:66699588-66699607 | Msa0086120:intron | 15.0% |
| !!! | TGTTTATGAATTTTACATTT+TGG | - | chr1_2:66699905-66699924 | Msa0086120:intron | 15.0% |
| !! | TAATATTACTTAATTTCTCT+TGG | - | chr1_2:66700290-66700309 | Msa0086120:intron | 15.0% |
| !!! | TTATTTGGAAGTTTTTATAA+GGG | + | chr1_2:66700678-66700697 | None:intergenic | 15.0% |
| !! | ACATACTTAAAAACAAAAAT+AGG | + | chr1_2:66700855-66700874 | None:intergenic | 15.0% |
| !! | TATATACAAAAAATTACACA+TGG | - | chr1_2:66701336-66701355 | Msa0086120:intron | 15.0% |
| !! | ATATACAAAAAATTACACAT+GGG | - | chr1_2:66701337-66701356 | Msa0086120:intron | 15.0% |
| !! | ATAATTAAAAATTATGTGCT+AGG | + | chr1_2:66701597-66701616 | None:intergenic | 15.0% |
| !!! | ATACTTTTATGAATAATTTC+TGG | - | chr1_2:66702049-66702068 | Msa0086120:intron | 15.0% |
| !! | TAAAGATATAAAATCAATCA+TGG | - | chr1_2:66702626-66702645 | Msa0086120:intron | 15.0% |
| !! | AAAGATATAAAATCAATCAT+GGG | - | chr1_2:66702627-66702646 | Msa0086120:intron | 15.0% |
| !! | ATCAATTCTTAAACTTAATA+TGG | + | chr1_2:66704253-66704272 | None:intergenic | 15.0% |
| !!! | TTTTTTATCCATAATAAACT+TGG | - | chr1_2:66704674-66704693 | Msa0086120:intron | 15.0% |
| !!! | GATTTTATTCATTACTAATT+AGG | - | chr1_2:66705292-66705311 | Msa0086120:five_prime_UTR | 15.0% |
| !! | TTATAGTTGGAAATTCAAAA+AGG | - | chr1_2:66697337-66697356 | Msa0086120:three_prime_UTR | 20.0% |
| !! | CTATGCTATTATATACAATA+AGG | + | chr1_2:66697977-66697996 | None:intergenic | 20.0% |
| !! | TAGATATGTCATAAGTATAT+AGG | - | chr1_2:66698140-66698159 | Msa0086120:CDS | 20.0% |
| !! | TCTTAAAGTATATTATACTC+TGG | - | chr1_2:66698505-66698524 | Msa0086120:intron | 20.0% |
| !! | ACAAAAACTTCAACAAAATT+GGG | + | chr1_2:66698567-66698586 | None:intergenic | 20.0% |
| !! | TTTGTCAACATAAATAGATT+TGG | - | chr1_2:66698582-66698601 | Msa0086120:intron | 20.0% |
| !! | GGTTCTTTGTAAAAATAATT+AGG | - | chr1_2:66698603-66698622 | Msa0086120:intron | 20.0% |
| !!! | GATATGTTATTTAGTACAAA+AGG | - | chr1_2:66698691-66698710 | Msa0086120:intron | 20.0% |
| !!! | AGAGATTGATTTCTTATAAT+TGG | - | chr1_2:66698880-66698899 | Msa0086120:CDS | 20.0% |
| !! | TTCTTAAATTCTGTTCATAA+AGG | - | chr1_2:66698904-66698923 | Msa0086120:CDS | 20.0% |
| !!! | TTTTGTTCCTTAAATTAACA+CGG | - | chr1_2:66699647-66699666 | Msa0086120:intron | 20.0% |
| !!! | ATAGCTTTATTTTTGTAAGT+TGG | - | chr1_2:66699775-66699794 | Msa0086120:intron | 20.0% |
| !!! | TAGCTTTATTTTTGTAAGTT+GGG | - | chr1_2:66699776-66699795 | Msa0086120:intron | 20.0% |
| !!! | TTTTGAACCAAATTATTTGA+AGG | - | chr1_2:66699856-66699875 | Msa0086120:intron | 20.0% |
| !! | TTTGAACCAAATTATTTGAA+GGG | - | chr1_2:66699857-66699876 | Msa0086120:intron | 20.0% |
| !! | TTAAGTAATATTAAACACCA+TGG | + | chr1_2:66700283-66700302 | None:intergenic | 20.0% |
| !! | ATGATTAACACTTGAAAATT+TGG | + | chr1_2:66700417-66700436 | None:intergenic | 20.0% |
| !!! | AATTTTCAAGTGTTAATCAT+AGG | - | chr1_2:66700417-66700436 | Msa0086120:intron | 20.0% |
| !!! | TGTTGAAGTATCTATTTATA+CGG | + | chr1_2:66700448-66700467 | None:intergenic | 20.0% |
| !!! | GTTATTTGGAAGTTTTTATA+AGG | + | chr1_2:66700679-66700698 | None:intergenic | 20.0% |
| !! | TTTAAGCATATATAATGAGT+TGG | + | chr1_2:66700930-66700949 | None:intergenic | 20.0% |
| !! | TTTAAATAATAGATATGGCA+AGG | - | chr1_2:66700970-66700989 | Msa0086120:intron | 20.0% |
| !! | TTTATTTGATCAAGTAAGAT+GGG | + | chr1_2:66701302-66701321 | None:intergenic | 20.0% |
| !!! | TTTTATTTGATCAAGTAAGA+TGG | + | chr1_2:66701303-66701322 | None:intergenic | 20.0% |
| !! | ATCAACTATAAAAGAACTAT+TGG | + | chr1_2:66701452-66701471 | None:intergenic | 20.0% |
| !!! | TATAGTTGATTTTTCTTTCA+AGG | - | chr1_2:66701462-66701481 | Msa0086120:intron | 20.0% |
| !!! | CGTTTGAAAAAGTATAATTA+AGG | + | chr1_2:66702340-66702359 | None:intergenic | 20.0% |
| !!! | ATCATTCAAGTATTTGAAAT+AGG | - | chr1_2:66702372-66702391 | Msa0086120:intron | 20.0% |
| !!! | TTGTGAGAATATAAAGTTTT+TGG | - | chr1_2:66702423-66702442 | Msa0086120:intron | 20.0% |
| !!! | AATAACTTTGAAGATTAAAC+AGG | + | chr1_2:66702542-66702561 | None:intergenic | 20.0% |
| !!! | GAAAAAAAAAAGGCATTAAT+AGG | + | chr1_2:66702906-66702925 | None:intergenic | 20.0% |
| !!! | TTTCTGTAAATTTTTCTGTT+TGG | - | chr1_2:66702922-66702941 | Msa0086120:intron | 20.0% |
| !!! | GATTCATTAGCTTAAATATA+GGG | + | chr1_2:66703007-66703026 | None:intergenic | 20.0% |
| !!! | TGATTCATTAGCTTAAATAT+AGG | + | chr1_2:66703008-66703027 | None:intergenic | 20.0% |
| !! | ATATTTAAGCTAATGAATCA+TGG | - | chr1_2:66703008-66703027 | Msa0086120:intron | 20.0% |
| !!! | TTTTCACTTTTACATCTAAA+TGG | - | chr1_2:66703153-66703172 | Msa0086120:intron | 20.0% |
| !! | ATAAATAGTACAAATGTACA+AGG | + | chr1_2:66703284-66703303 | None:intergenic | 20.0% |
| !! | GCTGTTATCATAATATAAAT+AGG | - | chr1_2:66703314-66703333 | Msa0086120:CDS | 20.0% |
| !! | GCTGTTATCATAATATAAAT+AGG | - | chr1_2:66703314-66703333 | Msa0086120:CDS | 20.0% |
| !!! | ATAACATCTGTTGTTATTTT+AGG | + | chr1_2:66703802-66703821 | None:intergenic | 20.0% |
| !! | AATAACAACAGATGTTATAT+TGG | - | chr1_2:66703804-66703823 | Msa0086120:intron | 20.0% |
| !! | AATAAATGTCAATGATTGAA+TGG | - | chr1_2:66703992-66704011 | Msa0086120:intron | 20.0% |
| !! | ACTTAATATGGTCAAAATTA+GGG | + | chr1_2:66704241-66704260 | None:intergenic | 20.0% |
| !! | AACTTAATATGGTCAAAATT+AGG | + | chr1_2:66704242-66704261 | None:intergenic | 20.0% |
| !! | ATACAAATCCAAGTTTATTA+TGG | + | chr1_2:66704685-66704704 | None:intergenic | 20.0% |
| !!! | GGATTTTATTGACATTTTTT+TGG | - | chr1_2:66704715-66704734 | Msa0086120:intron | 20.0% |
| !!! | AAATTAAGGCATTCAAATAA+GGG | + | chr1_2:66704790-66704809 | None:intergenic | 20.0% |
| !!! | ATTACTAATTAGGTTTTGAT+AGG | - | chr1_2:66705302-66705321 | Msa0086120:five_prime_UTR | 20.0% |
| ! | TTGATCTTGATACTTGAATT+GGG | - | chr1_2:66697306-66697325 | Msa0086120:three_prime_UTR | 25.0% |
| ! | TAAAAAGGGTCTAAGAAAAA+TGG | - | chr1_2:66697677-66697696 | Msa0086120:CDS | 25.0% |
| ! | AAAAATGGATGATGATAAGT+TGG | - | chr1_2:66697692-66697711 | Msa0086120:CDS | 25.0% |
| ! | TTACCATATCCTATGAATTT+CGG | - | chr1_2:66698084-66698103 | Msa0086120:intron | 25.0% |
| ! | TAGGATCAATGTAAAGATTT+AGG | - | chr1_2:66698159-66698178 | Msa0086120:CDS | 25.0% |
| ! | AGGATCAATGTAAAGATTTA+GGG | - | chr1_2:66698160-66698179 | Msa0086120:intron | 25.0% |
| ! | AAAGCAATGATAAAGCATAA+AGG | + | chr1_2:66698441-66698460 | None:intergenic | 25.0% |
| !!! | TCAACAAAATTGGGTTTTTT+AGG | + | chr1_2:66698558-66698577 | None:intergenic | 25.0% |
| ! | GACAAAAACTTCAACAAAAT+TGG | + | chr1_2:66698568-66698587 | None:intergenic | 25.0% |
| ! | TGTAAAAATAATTAGGTGCA+TGG | - | chr1_2:66698610-66698629 | Msa0086120:intron | 25.0% |
| ! | GTAAAAATAATTAGGTGCAT+GGG | - | chr1_2:66698611-66698630 | Msa0086120:intron | 25.0% |
| ! | AACATATCCCAAAACAATAA+CGG | + | chr1_2:66698679-66698698 | None:intergenic | 25.0% |
| ! | GTATTGTCAATTGAAAATAG+TGG | + | chr1_2:66698776-66698795 | None:intergenic | 25.0% |
| !! | CTATTTTCAATTGACAATAC+CGG | - | chr1_2:66698776-66698795 | Msa0086120:intron | 25.0% |
| !! | TATTTTCAATTGACAATACC+GGG | - | chr1_2:66698777-66698796 | Msa0086120:intron | 25.0% |
| ! | AGAAATCAATCTCTTAACAA+AGG | + | chr1_2:66698874-66698893 | None:intergenic | 25.0% |
| ! | AAATTCTGTTCATAAAGGTT+TGG | - | chr1_2:66698909-66698928 | Msa0086120:CDS | 25.0% |
| ! | TAGTGAAGATACAAAAAGAT+GGG | - | chr1_2:66699283-66699302 | Msa0086120:intron | 25.0% |
| ! | ATTCAAATAAATCAGTTCCA+CGG | - | chr1_2:66699409-66699428 | Msa0086120:intron | 25.0% |
| ! | GTGTTAATTTAAGGAACAAA+AGG | + | chr1_2:66699648-66699667 | None:intergenic | 25.0% |
| ! | TTTGTTCCTTAAATTAACAC+GGG | - | chr1_2:66699648-66699667 | Msa0086120:intron | 25.0% |
| !!! | AGCTTTATTTTTGTAAGTTG+GGG | - | chr1_2:66699777-66699796 | Msa0086120:intron | 25.0% |
| ! | TTAGTTCAAGTATGAAAGTA+TGG | + | chr1_2:66699957-66699976 | None:intergenic | 25.0% |
| ! | CTAATTTCAAGACATTTGTA+AGG | - | chr1_2:66700030-66700049 | Msa0086120:intron | 25.0% |
| ! | AAGTTAAACAAAGTACAAGT+AGG | + | chr1_2:66700167-66700186 | None:intergenic | 25.0% |
| ! | ACCTGTTAAATTTAGTATTC+AGG | - | chr1_2:66700227-66700246 | Msa0086120:intron | 25.0% |
| ! | ACCTGAATACTAAATTTAAC+AGG | + | chr1_2:66700231-66700250 | None:intergenic | 25.0% |
| !! | CATTTTATAGTAATAGCTTG+AGG | + | chr1_2:66700388-66700407 | None:intergenic | 25.0% |
| ! | TAAATAACCAATTGTAGTGT+AGG | - | chr1_2:66700595-66700614 | Msa0086120:CDS | 25.0% |
| ! | AAATAACCAATTGTAGTGTA+GGG | - | chr1_2:66700596-66700615 | Msa0086120:CDS | 25.0% |
| ! | TTAGCTTAATCTTTAATGCA+AGG | + | chr1_2:66700822-66700841 | None:intergenic | 25.0% |
| !! | TAATGAGTTGGATAGAAAAT+GGG | + | chr1_2:66700918-66700937 | None:intergenic | 25.0% |
| !! | ATAATGAGTTGGATAGAAAA+TGG | + | chr1_2:66700919-66700938 | None:intergenic | 25.0% |
| !!! | ATTAGTTTTGCCATCTAAAA+AGG | + | chr1_2:66701398-66701417 | None:intergenic | 25.0% |
| ! | CTTTGCAATAAAAGAACAAT+TGG | + | chr1_2:66701496-66701515 | None:intergenic | 25.0% |
| ! | TGAAATATTGTTTCAGCAAA+AGG | + | chr1_2:66702016-66702035 | None:intergenic | 25.0% |
| ! | TACTACACTATATAGTTTAG+TGG | + | chr1_2:66702516-66702535 | None:intergenic | 25.0% |
| ! | GTTAAAAGTCATTATCCTTA+AGG | + | chr1_2:66702688-66702707 | None:intergenic | 25.0% |
| !!! | TTTCTCCAATGGATTAAAAA+AGG | - | chr1_2:66702792-66702811 | Msa0086120:intron | 25.0% |
| !!! | CTCCTTTATATTTTGGATTT+GGG | - | chr1_2:66702820-66702839 | Msa0086120:intron | 25.0% |
| ! | AACAAATACTGACACTATAA+TGG | + | chr1_2:66702966-66702985 | None:intergenic | 25.0% |
| ! | ATAAGTTGTTAAACCAAACA+GGG | + | chr1_2:66703340-66703359 | None:intergenic | 25.0% |
| ! | AATAAGTTGTTAAACCAAAC+AGG | + | chr1_2:66703341-66703360 | None:intergenic | 25.0% |
| ! | ATAAGTTGTTAAACCAAACA+GGG | + | chr1_2:66703340-66703359 | None:intergenic | 25.0% |
| ! | AATAAGTTGTTAAACCAAAC+AGG | + | chr1_2:66703341-66703360 | None:intergenic | 25.0% |
| ! | ATTATTTGAGCTTATCTACT+GGG | + | chr1_2:66703652-66703671 | None:intergenic | 25.0% |
| ! | TAAGCTCAAATAATCTGTTT+CGG | - | chr1_2:66703658-66703677 | Msa0086120:intron | 25.0% |
| !! | AAATATTTCTAATCGTCTCA+AGG | + | chr1_2:66703718-66703737 | None:intergenic | 25.0% |
| !! | TGAACTAATTTTTATCCAGT+CGG | - | chr1_2:66704178-66704197 | Msa0086120:intron | 25.0% |
| !! | CATTATGTTATGTGCATTTT+AGG | - | chr1_2:66704320-66704339 | Msa0086120:intron | 25.0% |
| ! | TTTCAATTTATGCTTTCTTG+TGG | - | chr1_2:66704468-66704487 | Msa0086120:intron | 25.0% |
| ! | TTCAATTTATGCTTTCTTGT+GGG | - | chr1_2:66704469-66704488 | Msa0086120:intron | 25.0% |
| ! | CGTAAAGAAGAAAGAAAAAT+TGG | - | chr1_2:66704499-66704518 | Msa0086120:intron | 25.0% |
| ! | AAAGAAGAAAGAAAAATTGG+AGG | - | chr1_2:66704502-66704521 | Msa0086120:intron | 25.0% |
| ! | AAGAAGAAAGAAAAATTGGA+GGG | - | chr1_2:66704503-66704522 | Msa0086120:intron | 25.0% |
| ! | ATGTCAATAAAATCCTAACA+CGG | + | chr1_2:66704710-66704729 | None:intergenic | 25.0% |
| !! | CAAATTAAGGCATTCAAATA+AGG | + | chr1_2:66704791-66704810 | None:intergenic | 25.0% |
| ! | TAGAATACATCAAAAAGAGT+TGG | - | chr1_2:66704864-66704883 | Msa0086120:intron | 25.0% |
| ! | AGAATACATCAAAAAGAGTT+GGG | - | chr1_2:66704865-66704884 | Msa0086120:intron | 25.0% |
| ! | ACATCAAGAGTGAATATTAT+TGG | + | chr1_2:66705021-66705040 | None:intergenic | 25.0% |
| ! | AACTTTCTGTTATTACAGAA+TGG | - | chr1_2:66705325-66705344 | Msa0086120:five_prime_UTR | 25.0% |
| ! | TGAACATTTATTGTTAGTCA+AGG | + | chr1_2:66705415-66705434 | None:intergenic | 25.0% |
| GTAGTGGTAGTTCAAATTAA+TGG | + | chr1_2:66697271-66697290 | None:intergenic | 30.0% | |
| CAATTCAAGTATCAAGATCA+AGG | + | chr1_2:66697307-66697326 | None:intergenic | 30.0% | |
| CTTGATCTTGATACTTGAAT+TGG | - | chr1_2:66697305-66697324 | Msa0086120:three_prime_UTR | 30.0% | |
| ATTGAAACACAAAGAACGTT+CGG | + | chr1_2:66697380-66697399 | None:intergenic | 30.0% | |
| TTTGTGTTTCAATGACTGTT+GGG | - | chr1_2:66697387-66697406 | Msa0086120:three_prime_UTR | 30.0% | |
| !! | TTTGTGTTTTGTTCTTTCTG+AGG | - | chr1_2:66697471-66697490 | Msa0086120:three_prime_UTR | 30.0% |
| ACTGATTATTGTGATTGTGA+TGG | - | chr1_2:66697611-66697630 | Msa0086120:CDS | 30.0% | |
| CTGATTATTGTGATTGTGAT+GGG | - | chr1_2:66697612-66697631 | Msa0086120:CDS | 30.0% | |
| AGAAGTGGTAGAAGATAAAA+AGG | - | chr1_2:66697662-66697681 | Msa0086120:CDS | 30.0% | |
| GAAGTGGTAGAAGATAAAAA+GGG | - | chr1_2:66697663-66697682 | Msa0086120:CDS | 30.0% | |
| ATTATGTCTCAAGAAGATGA+CGG | - | chr1_2:66697738-66697757 | Msa0086120:intron | 30.0% | |
| CTATCTAAATCAGATTTGTC+TGG | - | chr1_2:66697840-66697859 | Msa0086120:CDS | 30.0% | |
| TTATTCCTTCCGAAATTCAT+AGG | + | chr1_2:66698096-66698115 | None:intergenic | 30.0% | |
| GGATCAATGTAAAGATTTAG+GGG | - | chr1_2:66698161-66698180 | Msa0086120:intron | 30.0% | |
| GATCAATGTAAAGATTTAGG+GGG | - | chr1_2:66698162-66698181 | Msa0086120:intron | 30.0% | |
| !! | TTTTTGAAAACTTGGTATCC+AGG | - | chr1_2:66698209-66698228 | Msa0086120:intron | 30.0% |
| !!! | TATACTCTGGATTGCTTTTT+AGG | - | chr1_2:66698518-66698537 | Msa0086120:intron | 30.0% |
| ! | GAACAAACCGTTATTGTTTT+GGG | - | chr1_2:66698669-66698688 | Msa0086120:intron | 30.0% |
| TTGTCAAATAGTGACTATTG+CGG | - | chr1_2:66698714-66698733 | Msa0086120:intron | 30.0% | |
| ! | ATTTTCAATTGACAATACCG+GGG | - | chr1_2:66698778-66698797 | Msa0086120:intron | 30.0% |
| ! | AAGCACAACCTTGAAATTTT+AGG | + | chr1_2:66699108-66699127 | None:intergenic | 30.0% |
| ! | CATCTTTTTGTATCTTCACT+AGG | + | chr1_2:66699284-66699303 | None:intergenic | 30.0% |
| CTAGTGAAGATACAAAAAGA+TGG | - | chr1_2:66699282-66699301 | Msa0086120:intron | 30.0% | |
| GTTACAAATTGTCATACTTG+TGG | - | chr1_2:66699431-66699450 | Msa0086120:intron | 30.0% | |
| ACTGAGCTTGTAAATTAAAC+TGG | - | chr1_2:66699705-66699724 | Msa0086120:intron | 30.0% | |
| CTGAGCTTGTAAATTAAACT+GGG | - | chr1_2:66699706-66699725 | Msa0086120:intron | 30.0% | |
| AAACTGGGTTTCTAAATTTC+AGG | - | chr1_2:66699721-66699740 | Msa0086120:intron | 30.0% | |
| AACTGGGTTTCTAAATTTCA+GGG | - | chr1_2:66699722-66699741 | Msa0086120:intron | 30.0% | |
| ATTTCAGGGAAGACATATTA+TGG | - | chr1_2:66699736-66699755 | Msa0086120:intron | 30.0% | |
| TTGCTTCCCTTCAAATAATT+TGG | + | chr1_2:66699866-66699885 | None:intergenic | 30.0% | |
| TAATACCAATGTTTACTTGC+AGG | - | chr1_2:66699974-66699993 | Msa0086120:CDS | 30.0% | |
| GACTTACGACAAATTTGAAT+TGG | - | chr1_2:66700495-66700514 | Msa0086120:CDS | 30.0% | |
| CGACAAATTTGAATTGGATA+TGG | - | chr1_2:66700501-66700520 | Msa0086120:CDS | 30.0% | |
| !!! | AAGAGCTAATTGTTTTTGCT+TGG | + | chr1_2:66700546-66700565 | None:intergenic | 30.0% |
| ! | AAGCAAAAACAATTAGCTCT+TGG | - | chr1_2:66700545-66700564 | Msa0086120:CDS | 30.0% |
| TAAGGGATCATTATGTTTAG+AGG | + | chr1_2:66700661-66700680 | None:intergenic | 30.0% | |
| ! | AAGCTTTGGTTGTTGTTATT+TGG | + | chr1_2:66700693-66700712 | None:intergenic | 30.0% |
| AATAACAACAACCAAAGCTT+AGG | - | chr1_2:66700693-66700712 | Msa0086120:intron | 30.0% | |
| TAATCTTTAATGCAAGGATC+AGG | + | chr1_2:66700816-66700835 | None:intergenic | 30.0% | |
| ATAGATATGGCAAGGAATAA+AGG | - | chr1_2:66700978-66700997 | Msa0086120:intron | 30.0% | |
| CTTTGGTTAGATATTTCAGT+CGG | + | chr1_2:66701020-66701039 | None:intergenic | 30.0% | |
| AAAAATTACACATGGGTGAA+AGG | - | chr1_2:66701344-66701363 | Msa0086120:intron | 30.0% | |
| ! | TAATGTTTGCAAGTTTTCCA+AGG | - | chr1_2:66701569-66701588 | Msa0086120:intron | 30.0% |
| ATTGTGAAGAAGATGTGAAT+AGG | + | chr1_2:66701673-66701692 | None:intergenic | 30.0% | |
| TTATATAAGACAGCTGCAAA+TGG | + | chr1_2:66702112-66702131 | None:intergenic | 30.0% | |
| TAATTGTGGATCTACTGATA+TGG | - | chr1_2:66702129-66702148 | Msa0086120:intron | 30.0% | |
| ! | ATATTGTATGAAGCACCATA+AGG | - | chr1_2:66702570-66702589 | Msa0086120:intron | 30.0% |
| TATCACCACAAATAACCTTA+TGG | + | chr1_2:66702588-66702607 | None:intergenic | 30.0% | |
| CAACTTAAGCTTAGAAGAAT+TGG | - | chr1_2:66702661-66702680 | Msa0086120:CDS | 30.0% | |
| !! | TTTTAACTCATTTGCAGACT+GGG | - | chr1_2:66702701-66702720 | Msa0086120:CDS | 30.0% |
| AATCCAAAATATAAAGGAGG+TGG | + | chr1_2:66702819-66702838 | None:intergenic | 30.0% | |
| CCAAATCCAAAATATAAAGG+AGG | + | chr1_2:66702822-66702841 | None:intergenic | 30.0% | |
| !! | CCTCCTTTATATTTTGGATT+TGG | - | chr1_2:66702819-66702838 | Msa0086120:intron | 30.0% |
| CTCCCAAATCCAAAATATAA+AGG | + | chr1_2:66702825-66702844 | None:intergenic | 30.0% | |
| AAATACTGACACTATAATGG+TGG | + | chr1_2:66702963-66702982 | None:intergenic | 30.0% | |
| TTTAAGCTAATGAATCATGG+TGG | - | chr1_2:66703011-66703030 | Msa0086120:intron | 30.0% | |
| TTAAGCTAATGAATCATGGT+GGG | - | chr1_2:66703012-66703031 | Msa0086120:intron | 30.0% | |
| CATATTTGTCATGTCTCTAA+TGG | + | chr1_2:66703071-66703090 | None:intergenic | 30.0% | |
| TTACAATCCAAACATGTAGT+GGG | + | chr1_2:66703123-66703142 | None:intergenic | 30.0% | |
| ATTACAATCCAAACATGTAG+TGG | + | chr1_2:66703124-66703143 | None:intergenic | 30.0% | |
| !! | TGTTTTCATGTTCTAGACAA+GGG | + | chr1_2:66703217-66703236 | None:intergenic | 30.0% |
| !! | ATGTTTTCATGTTCTAGACA+AGG | + | chr1_2:66703218-66703237 | None:intergenic | 30.0% |
| TAATATAAATAGGCCCTGTT+TGG | - | chr1_2:66703324-66703343 | Msa0086120:CDS | 30.0% | |
| TAATATAAATAGGCCCTGTT+TGG | - | chr1_2:66703324-66703343 | Msa0086120:CDS | 30.0% | |
| ACAACTTATTAAGCGCTTAT+AGG | - | chr1_2:66703427-66703446 | Msa0086120:CDS | 30.0% | |
| !!! | AAACACTTTTGAGACTGTTT+AGG | + | chr1_2:66703627-66703646 | None:intergenic | 30.0% |
| GATTATTTGAGCTTATCTAC+TGG | + | chr1_2:66703653-66703672 | None:intergenic | 30.0% | |
| !!! | GTTATTTTAGGATCTTCAAG+AGG | + | chr1_2:66703790-66703809 | None:intergenic | 30.0% |
| ATCTGAAAAAAGCGAAACAT+AGG | + | chr1_2:66703923-66703942 | None:intergenic | 30.0% | |
| CGATGATGAATCTAAGTTAA+TGG | + | chr1_2:66704071-66704090 | None:intergenic | 30.0% | |
| AGAAGAAAGAAAAATTGGAG+GGG | - | chr1_2:66704504-66704523 | Msa0086120:intron | 30.0% | |
| AGAATTGATCTCCAAAGAAT+GGG | + | chr1_2:66704834-66704853 | None:intergenic | 30.0% | |
| AAGAATTGATCTCCAAAGAA+TGG | + | chr1_2:66704835-66704854 | None:intergenic | 30.0% | |
| !! | TCTTTGGAGATCAATTCTTT+TGG | - | chr1_2:66704836-66704855 | Msa0086120:intron | 30.0% |
| !! | CTTTGGAGATCAATTCTTTT+GGG | - | chr1_2:66704837-66704856 | Msa0086120:intron | 30.0% |
| ! | TTTGGAGATCAATTCTTTTG+GGG | - | chr1_2:66704838-66704857 | Msa0086120:intron | 30.0% |
| TAAATTCTCAACATTGAGCT+CGG | + | chr1_2:66704911-66704930 | None:intergenic | 30.0% | |
| GAAACTGTTTGCAATGATAA+AGG | + | chr1_2:66704989-66705008 | None:intergenic | 30.0% | |
| TATCATTGCAAACAGTTTCA+TGG | - | chr1_2:66704990-66705009 | Msa0086120:CDS | 30.0% | |
| ATTCACTCTTGATGTATTTC+AGG | - | chr1_2:66705026-66705045 | Msa0086120:CDS | 30.0% | |
| ! | ATGTATTTCAGGTGAAATCT+CGG | - | chr1_2:66705037-66705056 | Msa0086120:CDS | 30.0% |
| TGGTCAAAAAACCAATTAAG+AGG | + | chr1_2:66705195-66705214 | None:intergenic | 30.0% | |
| ! | AGAATGGTAGCATAATGTTT+TGG | - | chr1_2:66705341-66705360 | Msa0086120:five_prime_UTR | 30.0% |
| TCCTATACAAAATGTTTGAG+GGG | + | chr1_2:66705467-66705486 | None:intergenic | 30.0% | |
| CTCCTATACAAAATGTTTGA+GGG | + | chr1_2:66705468-66705487 | None:intergenic | 30.0% | |
| GATACTTGAATTGGGTTATG+AGG | - | chr1_2:66697314-66697333 | Msa0086120:three_prime_UTR | 35.0% | |
| TTGGGTTATGAGGTTATAGT+TGG | - | chr1_2:66697324-66697343 | Msa0086120:three_prime_UTR | 35.0% | |
| CTTTGTGTTTCAATGACTGT+TGG | - | chr1_2:66697386-66697405 | Msa0086120:three_prime_UTR | 35.0% | |
| ! | GTTTTCAGAATCAGATTCCA+AGG | - | chr1_2:66697445-66697464 | Msa0086120:three_prime_UTR | 35.0% |
| GAACAAAACACAAAGTTCCT+TGG | + | chr1_2:66697465-66697484 | None:intergenic | 35.0% | |
| !! | TTTGTTCTTTCTGAGGTTGT+TGG | - | chr1_2:66697478-66697497 | Msa0086120:three_prime_UTR | 35.0% |
| !! | TGATTGTGATGGGTTGTAAT+GGG | - | chr1_2:66697622-66697641 | Msa0086120:CDS | 35.0% |
| AAGAAGTAACTTCCGATGAT+TGG | + | chr1_2:66697791-66697810 | None:intergenic | 35.0% | |
| ACACTAACACTAACATGTGT+TGG | + | chr1_2:66697869-66697888 | None:intergenic | 35.0% | |
| GTTAGTGTTAGTGTCATATC+TGG | - | chr1_2:66697875-66697894 | Msa0086120:CDS | 35.0% | |
| ! | TGTTTGTGTCGTTGTTTCAT+AGG | - | chr1_2:66697898-66697917 | Msa0086120:CDS | 35.0% |
| ! | GTAGTCAACATATAGCTCTA+TGG | - | chr1_2:66698045-66698064 | Msa0086120:intron | 35.0% |
| ! | TATAGCTCTATGGAATCTTG+TGG | - | chr1_2:66698055-66698074 | Msa0086120:intron | 35.0% |
| CTTCCGAAATTCATAGGATA+TGG | + | chr1_2:66698090-66698109 | None:intergenic | 35.0% | |
| CATATCCTATGAATTTCGGA+AGG | - | chr1_2:66698088-66698107 | Msa0086120:intron | 35.0% | |
| ! | AAATTAGTCAGTCTTTTGCC+TGG | + | chr1_2:66698230-66698249 | None:intergenic | 35.0% |
| GCAAAAGACTGACTAATTTG+AGG | - | chr1_2:66698231-66698250 | Msa0086120:intron | 35.0% | |
| !! | GCTAAGTCTTGGCTTTAAAT+GGG | + | chr1_2:66698285-66698304 | None:intergenic | 35.0% |
| ! | GGTTTAATGGTGTTTGACTT+GGG | + | chr1_2:66698369-66698388 | None:intergenic | 35.0% |
| TGGTTTAATGGTGTTTGACT+TGG | + | chr1_2:66698370-66698389 | None:intergenic | 35.0% | |
| ACCATTAAACCAACCCAAAT+GGG | - | chr1_2:66698378-66698397 | Msa0086120:intron | 35.0% | |
| AAATTGTAACCCATTTGGGT+TGG | + | chr1_2:66698390-66698409 | None:intergenic | 35.0% | |
| GCACAAATTGTAACCCATTT+GGG | + | chr1_2:66698394-66698413 | None:intergenic | 35.0% | |
| AGCACAAATTGTAACCCATT+TGG | + | chr1_2:66698395-66698414 | None:intergenic | 35.0% | |
| ATGCTTTATCATTGCTTTGC+TGG | - | chr1_2:66698443-66698462 | Msa0086120:intron | 35.0% | |
| TGCTTTATCATTGCTTTGCT+GGG | - | chr1_2:66698444-66698463 | Msa0086120:intron | 35.0% | |
| !! | AAGAAAAGGCATTTCACAGA+AGG | + | chr1_2:66698483-66698502 | None:intergenic | 35.0% |
| ! | CGAACAAACCGTTATTGTTT+TGG | - | chr1_2:66698668-66698687 | Msa0086120:intron | 35.0% |
| ! | TTTTCAATTGACAATACCGG+GGG | - | chr1_2:66698779-66698798 | Msa0086120:intron | 35.0% |
| ATCAATCTCTTAACAAAGGC+AGG | + | chr1_2:66698870-66698889 | None:intergenic | 35.0% | |
| TCTCATCTTCAGCTATTAGT+GGG | + | chr1_2:66698972-66698991 | None:intergenic | 35.0% | |
| ATCTCATCTTCAGCTATTAG+TGG | + | chr1_2:66698973-66698992 | None:intergenic | 35.0% | |
| AGATCAATGACAGAAAAGAG+AGG | - | chr1_2:66699003-66699022 | Msa0086120:intron | 35.0% | |
| GATCAATGACAGAAAAGAGA+GGG | - | chr1_2:66699004-66699023 | Msa0086120:intron | 35.0% | |
| TATGCAAGTTTCACTGTATG+TGG | - | chr1_2:66699078-66699097 | Msa0086120:intron | 35.0% | |
| !! | GTTCCAATCTTTTGAAGAGT+CGG | - | chr1_2:66699359-66699378 | Msa0086120:intron | 35.0% |
| AGTATGACAATTTGTAACCG+TGG | + | chr1_2:66699429-66699448 | None:intergenic | 35.0% | |
| CAAATTGTCATACTTGTGGT+TGG | - | chr1_2:66699435-66699454 | Msa0086120:intron | 35.0% | |
| CTGAAACCCGTGTTAATTTA+AGG | + | chr1_2:66699657-66699676 | None:intergenic | 35.0% | |
| ! | CTTTTCCTTATTGAGCTGAT+TGG | - | chr1_2:66699809-66699828 | Msa0086120:intron | 35.0% |
| ATACTCCTGCAAGTAAACAT+TGG | + | chr1_2:66699982-66700001 | None:intergenic | 35.0% | |
| AATGTTTACTTGCAGGAGTA+TGG | - | chr1_2:66699981-66700000 | Msa0086120:CDS | 35.0% | |
| AAGACATTTGTAAGGTTAGC+TGG | - | chr1_2:66700038-66700057 | Msa0086120:intron | 35.0% | |
| TGGTGTAAATTTCTATCCTC+TGG | - | chr1_2:66700058-66700077 | Msa0086120:intron | 35.0% | |
| GGTGTAAATTTCTATCCTCT+GGG | - | chr1_2:66700059-66700078 | Msa0086120:intron | 35.0% | |
| GACATAAAGCAGCTAAAAGA+GGG | + | chr1_2:66700202-66700221 | None:intergenic | 35.0% | |
| !! | CTCTTTTAGCTGCTTTATGT+CGG | - | chr1_2:66700201-66700220 | Msa0086120:intron | 35.0% |
| TAGAATGCAGTGTTATACCA+TGG | - | chr1_2:66700263-66700282 | Msa0086120:intron | 35.0% | |
| !! | TCTCTTGGAGTTTTCTGAAA+AGG | - | chr1_2:66700305-66700324 | Msa0086120:intron | 35.0% |
| GTTGGATAGAAAATGGGATA+TGG | + | chr1_2:66700912-66700931 | None:intergenic | 35.0% | |
| TTCTAATCACTCACCATATG+CGG | + | chr1_2:66701247-66701266 | None:intergenic | 35.0% | |
| TTTGATCAAGTAAGATGGGA+TGG | + | chr1_2:66701298-66701317 | None:intergenic | 35.0% | |
| ! | TTTTGCCATCTAAAAAGGCT+TGG | + | chr1_2:66701393-66701412 | None:intergenic | 35.0% |
| ACAAATTAAACTCACGTCCA+TGG | + | chr1_2:66701697-66701716 | None:intergenic | 35.0% | |
| !!! | TTTTAAAAGGCACCGAGAAA+GGG | + | chr1_2:66701891-66701910 | None:intergenic | 35.0% |
| !!! | TTTTTAAAAGGCACCGAGAA+AGG | + | chr1_2:66701892-66701911 | None:intergenic | 35.0% |
| !! | TTTCTCAAAGTGCTGGTTAT+TGG | - | chr1_2:66701984-66702003 | Msa0086120:intron | 35.0% |
| !! | TTCTCAAAGTGCTGGTTATT+GGG | - | chr1_2:66701985-66702004 | Msa0086120:intron | 35.0% |
| AACAGGTTTGTCAATAAGGA+AGG | + | chr1_2:66702075-66702094 | None:intergenic | 35.0% | |
| TTGGAACAGGTTTGTCAATA+AGG | + | chr1_2:66702079-66702098 | None:intergenic | 35.0% | |
| TGCAAATGGCAAGGAAATAT+TGG | + | chr1_2:66702098-66702117 | None:intergenic | 35.0% | |
| GCAGCTGTCTTATATAATTG+TGG | - | chr1_2:66702115-66702134 | Msa0086120:intron | 35.0% | |
| TACATGCTGAAGTATGCAAT+AGG | + | chr1_2:66702209-66702228 | None:intergenic | 35.0% | |
| ATTTACCAACTGCCTATATG+TGG | - | chr1_2:66702246-66702265 | Msa0086120:intron | 35.0% | |
| AAGCACCATAAGGTTATTTG+TGG | - | chr1_2:66702580-66702599 | Msa0086120:intron | 35.0% | |
| CTTAGAAGAATTGGTCCTTA+AGG | - | chr1_2:66702670-66702689 | Msa0086120:CDS | 35.0% | |
| !! | CTTTTAACTCATTTGCAGAC+TGG | - | chr1_2:66702700-66702719 | Msa0086120:CDS | 35.0% |
| TTTAACTCATTTGCAGACTG+GGG | - | chr1_2:66702702-66702721 | Msa0086120:CDS | 35.0% | |
| ! | TTGTTGGTTACTGTTTCTTG+AGG | - | chr1_2:66702739-66702758 | Msa0086120:CDS | 35.0% |
| ATGAGTCAAACTATCAACCA+CGG | - | chr1_2:66702763-66702782 | Msa0086120:intron | 35.0% | |
| !!! | GTGGTCCTTTTTTAATCCAT+TGG | + | chr1_2:66702800-66702819 | None:intergenic | 35.0% |
| !! | ATATTTTGGATTTGGGAGCA+TGG | - | chr1_2:66702827-66702846 | Msa0086120:intron | 35.0% |
| GACAAATATGATACCTCAGT+TGG | - | chr1_2:66703081-66703100 | Msa0086120:intron | 35.0% | |
| AAAATACACTATGCCAACTG+AGG | + | chr1_2:66703097-66703116 | None:intergenic | 35.0% | |
| !!! | TTTTTTGCCCACTACATGTT+TGG | - | chr1_2:66703113-66703132 | Msa0086120:intron | 35.0% |
| !! | GTTTTCATGTTCTAGACAAG+GGG | + | chr1_2:66703216-66703235 | None:intergenic | 35.0% |
| !!! | GCTGTTTTTATAAGCTATCC+TGG | - | chr1_2:66703537-66703556 | Msa0086120:intron | 35.0% |
| !! | CTTATTTTCATAAGCTCTCC+AGG | + | chr1_2:66703558-66703577 | None:intergenic | 35.0% |
| CACTAAAAGAGACAGAACAA+CGG | - | chr1_2:66703830-66703849 | Msa0086120:intron | 35.0% | |
| ACTAAAAGAGACAGAACAAC+GGG | - | chr1_2:66703831-66703850 | Msa0086120:intron | 35.0% | |
| TTGATCTCGAGCTGAAAAAA+AGG | - | chr1_2:66704125-66704144 | Msa0086120:intron | 35.0% | |
| AATATGGTCAAAATTAGGGC+TGG | + | chr1_2:66704237-66704256 | None:intergenic | 35.0% | |
| TCTTCCTTTCACTCAAATCT+AGG | - | chr1_2:66704551-66704570 | Msa0086120:intron | 35.0% | |
| AAATCTAGGCATGAATTTGC+AGG | - | chr1_2:66704565-66704584 | Msa0086120:intron | 35.0% | |
| TGGATTTGTATTACCGTGTT+AGG | - | chr1_2:66704694-66704713 | Msa0086120:intron | 35.0% | |
| TTGTTGGACACTGCAAATTA+AGG | + | chr1_2:66704804-66704823 | None:intergenic | 35.0% | |
| AAGAATGGGACTATTGTTGT+TGG | + | chr1_2:66704820-66704839 | None:intergenic | 35.0% | |
| ACAACAATAGTCCCATTCTT+TGG | - | chr1_2:66704820-66704839 | Msa0086120:intron | 35.0% | |
| ! | AAGTTGATTGAGAGTGAAGA+TGG | - | chr1_2:66705075-66705094 | Msa0086120:CDS | 35.0% |
| ! | TTTTTGACCAACTTGCAAAG+TGG | - | chr1_2:66705205-66705224 | Msa0086120:five_prime_UTR | 35.0% |
| !!! | GGTAGCATAATGTTTTGGTT+TGG | - | chr1_2:66705346-66705365 | Msa0086120:five_prime_UTR | 35.0% |
| CCTATACAAAATGTTTGAGG+GGG | + | chr1_2:66705466-66705485 | None:intergenic | 35.0% | |
| CCTCCTATACAAAATGTTTG+AGG | + | chr1_2:66705469-66705488 | None:intergenic | 35.0% | |
| ! | CCTCAAACATTTTGTATAGG+AGG | - | chr1_2:66705466-66705485 | Msa0086120:five_prime_UTR | 35.0% |
| AGATCAAGGTGAAGTAGTAG+TGG | + | chr1_2:66697293-66697312 | None:intergenic | 40.0% | |
| !! | GTGATTGTGATGGGTTGTAA+TGG | - | chr1_2:66697621-66697640 | Msa0086120:CDS | 40.0% |
| TGAGCATTTGTGCAAAGAAG+TGG | - | chr1_2:66697647-66697666 | Msa0086120:CDS | 40.0% | |
| !! | GATAAGTTGGTTAGTGTGAG+AGG | - | chr1_2:66697705-66697724 | Msa0086120:intron | 40.0% |
| TTCACCTTCATCTAAGGAGA+GGG | - | chr1_2:66697761-66697780 | Msa0086120:intron | 40.0% | |
| !! | GGCTAAGTCTTGGCTTTAAA+TGG | + | chr1_2:66698286-66698305 | None:intergenic | 40.0% |
| !! | AATTTCAGTGGGCTAAGTCT+TGG | + | chr1_2:66698296-66698315 | None:intergenic | 40.0% |
| AAGACTTAGCCCACTGAAAT+TGG | - | chr1_2:66698295-66698314 | Msa0086120:intron | 40.0% | |
| CACCATTAAACCAACCCAAA+TGG | - | chr1_2:66698377-66698396 | Msa0086120:intron | 40.0% | |
| !! | ACCCATTTGGGTTGGTTTAA+TGG | + | chr1_2:66698382-66698401 | None:intergenic | 40.0% |
| ATAATTAGGTGCATGGGTGT+TGG | - | chr1_2:66698617-66698636 | Msa0086120:intron | 40.0% | |
| AAATAGTGGCTATAGCGTAG+TGG | - | chr1_2:66698641-66698660 | Msa0086120:intron | 40.0% | |
| TCAAATTCCACTACGCTACA+GGG | + | chr1_2:66698748-66698767 | None:intergenic | 40.0% | |
| TTCAAATTCCACTACGCTAC+AGG | + | chr1_2:66698749-66698768 | None:intergenic | 40.0% | |
| !! | CAAAAGCATTCAACCAAGGA+AGG | + | chr1_2:66698818-66698837 | None:intergenic | 40.0% |
| ! | CTTCCTTGGTTGAATGCTTT+TGG | - | chr1_2:66698816-66698835 | Msa0086120:intron | 40.0% |
| !! | AGACCAAAAGCATTCAACCA+AGG | + | chr1_2:66698822-66698841 | None:intergenic | 40.0% |
| GGTTAGAAACAATAGTCCAC+AGG | + | chr1_2:66698849-66698868 | None:intergenic | 40.0% | |
| ! | TCGAAGGCATGACCTAATAT+TGG | - | chr1_2:66699029-66699048 | Msa0086120:intron | 40.0% |
| CTGACAGTCTGTCCAATATT+AGG | + | chr1_2:66699044-66699063 | None:intergenic | 40.0% | |
| AATATTGGACAGACTGTCAG+AGG | - | chr1_2:66699044-66699063 | Msa0086120:intron | 40.0% | |
| CAAGTTTCACTGTATGTGGA+TGG | - | chr1_2:66699082-66699101 | Msa0086120:intron | 40.0% | |
| GTGGATGGCCTAAAATTTCA+AGG | - | chr1_2:66699097-66699116 | Msa0086120:intron | 40.0% | |
| ! | GGTTAGCAATCAGTTTTTGC+TGG | + | chr1_2:66699263-66699282 | None:intergenic | 40.0% |
| !! | CTACCGACTCTTCAAAAGAT+TGG | + | chr1_2:66699365-66699384 | None:intergenic | 40.0% |
| ATACTTGTGGTTGGAACTAG+AGG | - | chr1_2:66699444-66699463 | Msa0086120:intron | 40.0% | |
| GCTCAATAAGGAAAAGCCTA+GGG | + | chr1_2:66699805-66699824 | None:intergenic | 40.0% | |
| AGCTCAATAAGGAAAAGCCT+AGG | + | chr1_2:66699806-66699825 | None:intergenic | 40.0% | |
| AATCGCCAATCAGCTCAATA+AGG | + | chr1_2:66699817-66699836 | None:intergenic | 40.0% | |
| GTAAATTTCTATCCTCTGGG+TGG | - | chr1_2:66700062-66700081 | Msa0086120:intron | 40.0% | |
| CGACATAAAGCAGCTAAAAG+AGG | + | chr1_2:66700203-66700222 | None:intergenic | 40.0% | |
| GTAAGTCCATATGCAGTTCT+AGG | + | chr1_2:66700482-66700501 | None:intergenic | 40.0% | |
| TCTTCACCCTACACTACAAT+TGG | + | chr1_2:66700605-66700624 | None:intergenic | 40.0% | |
| AACAACAACCAAAGCTTAGG+TGG | - | chr1_2:66700696-66700715 | Msa0086120:intron | 40.0% | |
| AATAAAGGTCTGATTCCGTC+TGG | - | chr1_2:66700993-66701012 | Msa0086120:intron | 40.0% | |
| TAACCAAAGAAAGCAGCTGA+AGG | - | chr1_2:66701031-66701050 | Msa0086120:intron | 40.0% | |
| ATAATAGCCTGAGCTGTGAA+GGG | + | chr1_2:66701213-66701232 | None:intergenic | 40.0% | |
| AATAATAGCCTGAGCTGTGA+AGG | + | chr1_2:66701214-66701233 | None:intergenic | 40.0% | |
| TCTAATCACTCACCATATGC+GGG | + | chr1_2:66701246-66701265 | None:intergenic | 40.0% | |
| CCATGAATGTTGTGTTTACG+AGG | + | chr1_2:66701421-66701440 | None:intergenic | 40.0% | |
| CCTCGTAAACACAACATTCA+TGG | - | chr1_2:66701418-66701437 | Msa0086120:intron | 40.0% | |
| AAATTATGTGCTAGGAGCCT+TGG | + | chr1_2:66701589-66701608 | None:intergenic | 40.0% | |
| ACATCTTCTTCACAATGCCA+TGG | - | chr1_2:66701677-66701696 | Msa0086120:intron | 40.0% | |
| !!! | TTTTTTACCACCCCCTTTCT+CGG | - | chr1_2:66701876-66701895 | Msa0086120:intron | 40.0% |
| !! | TTTAAAAGGCACCGAGAAAG+GGG | + | chr1_2:66701890-66701909 | None:intergenic | 40.0% |
| TGGCAAGGAAATATTGGAAC+AGG | + | chr1_2:66702092-66702111 | None:intergenic | 40.0% | |
| TTGTGGATCTACTGATATGG+TGG | - | chr1_2:66702132-66702151 | Msa0086120:intron | 40.0% | |
| TGTGGATCTACTGATATGGT+GGG | - | chr1_2:66702133-66702152 | Msa0086120:intron | 40.0% | |
| AAGATGAGGACTCCACATAT+AGG | + | chr1_2:66702261-66702280 | None:intergenic | 40.0% | |
| !!! | CTTGGTTTTGGAACAAGATG+AGG | + | chr1_2:66702275-66702294 | None:intergenic | 40.0% |
| CATCTTGTTCCAAAACCAAG+TGG | - | chr1_2:66702275-66702294 | Msa0086120:intron | 40.0% | |
| TGTTCCAAAACCAAGTGGTA+TGG | - | chr1_2:66702280-66702299 | Msa0086120:intron | 40.0% | |
| ! | TTGTCCATACCACTTGGTTT+TGG | + | chr1_2:66702287-66702306 | None:intergenic | 40.0% |
| AAAACCAAGTGGTATGGACA+AGG | - | chr1_2:66702286-66702305 | Msa0086120:intron | 40.0% | |
| ! | GGCTCTTTAGTTGATGTTGT+TGG | - | chr1_2:66702723-66702742 | Msa0086120:CDS | 40.0% |
| TGAGTCAAACTATCAACCAC+GGG | - | chr1_2:66702764-66702783 | Msa0086120:intron | 40.0% | |
| ! | GGACCACCTCCTTTATATTT+TGG | - | chr1_2:66702813-66702832 | Msa0086120:intron | 40.0% |
| AATAAGCTGTAGCCAGCTTA+TGG | - | chr1_2:66703572-66703591 | Msa0086120:intron | 40.0% | |
| CTTATGACATGTCCATAAGC+TGG | + | chr1_2:66703587-66703606 | None:intergenic | 40.0% | |
| CTAAAAGAGACAGAACAACG+GGG | - | chr1_2:66703832-66703851 | Msa0086120:intron | 40.0% | |
| !!! | GCTTTTTTCAGATGCTGTTG+AGG | - | chr1_2:66703930-66703949 | Msa0086120:intron | 40.0% |
| ! | TGACAACGTTTTCCTTCTTG+AGG | - | chr1_2:66704399-66704418 | Msa0086120:intron | 40.0% |
| AAAAATTGGAGGGGTCACAA+GGG | - | chr1_2:66704513-66704532 | Msa0086120:intron | 40.0% | |
| CATGCCTAGATTTGAGTGAA+AGG | + | chr1_2:66704558-66704577 | None:intergenic | 40.0% | |
| ATGAATTTGCAGGTGCATCA+TGG | - | chr1_2:66704575-66704594 | Msa0086120:intron | 40.0% | |
| !! | AGATTTTAATCCTGTAGCCG+TGG | + | chr1_2:66704612-66704631 | None:intergenic | 40.0% |
| ACGGCTACAGGATTAAAATC+TGG | - | chr1_2:66704611-66704630 | Msa0086120:intron | 40.0% | |
| CGGCTACAGGATTAAAATCT+GGG | - | chr1_2:66704612-66704631 | Msa0086120:intron | 40.0% | |
| GGCTACAGGATTAAAATCTG+GGG | - | chr1_2:66704613-66704632 | Msa0086120:intron | 40.0% | |
| TTGAGCTCGGATATTGGAAT+TGG | + | chr1_2:66704898-66704917 | None:intergenic | 40.0% | |
| TCAACATTGAGCTCGGATAT+TGG | + | chr1_2:66704904-66704923 | None:intergenic | 40.0% | |
| GATGACTACACATTTACCTC+TGG | + | chr1_2:66704961-66704980 | None:intergenic | 40.0% | |
| ACCACTCAAGTCCTCTTAAT+TGG | - | chr1_2:66705181-66705200 | Msa0086120:five_prime_UTR | 40.0% | |
| ACCAATTAAGAGGACTTGAG+TGG | + | chr1_2:66705185-66705204 | None:intergenic | 40.0% | |
| AACAACACCACTTTGCAAGT+TGG | + | chr1_2:66705215-66705234 | None:intergenic | 40.0% | |
| AAAATCTACACACCACCACA+AGG | + | chr1_2:66705240-66705259 | None:intergenic | 40.0% | |
| ACAAAATGTTTGAGGGGGAA+GGG | + | chr1_2:66705461-66705480 | None:intergenic | 40.0% | |
| TACAAAATGTTTGAGGGGGA+AGG | + | chr1_2:66705462-66705481 | None:intergenic | 40.0% | |
| ! | CCCCCTCAAACATTTTGTAT+AGG | - | chr1_2:66705463-66705482 | Msa0086120:five_prime_UTR | 40.0% |
| AGGTGAAGTAGTAGTGGTAG+TGG | + | chr1_2:66697287-66697306 | None:intergenic | 45.0% | |
| CAATGACTGTTGGGTAGTAG+TGG | - | chr1_2:66697396-66697415 | Msa0086120:three_prime_UTR | 45.0% | |
| TGACGGTTCACCTTCATCTA+AGG | - | chr1_2:66697755-66697774 | Msa0086120:intron | 45.0% | |
| GTTCACCTTCATCTAAGGAG+AGG | - | chr1_2:66697760-66697779 | Msa0086120:intron | 45.0% | |
| TCACCTTCATCTAAGGAGAG+GGG | - | chr1_2:66697762-66697781 | Msa0086120:intron | 45.0% | |
| GTTACTTCTTTGCCACACAG+AGG | - | chr1_2:66697801-66697820 | Msa0086120:intron | 45.0% | |
| AATGAGCACAAACCTCTGTG+TGG | + | chr1_2:66697816-66697835 | None:intergenic | 45.0% | |
| TGCATGCTTACATCCTTCCT+TGG | - | chr1_2:66698802-66698821 | Msa0086120:intron | 45.0% | |
| !!! | TGCTTTTGGTCTTGTTCCTG+TGG | - | chr1_2:66698830-66698849 | Msa0086120:intron | 45.0% |
| CATTGCATCACAGCTCCTAT+TGG | - | chr1_2:66698934-66698953 | Msa0086120:CDS | 45.0% | |
| GGGTTTCTCTCAGTTCCAAT+AGG | + | chr1_2:66698952-66698971 | None:intergenic | 45.0% | |
| ! | AGGCGATGTACAACCTTTTG+TGG | - | chr1_2:66699464-66699483 | Msa0086120:intron | 45.0% |
| ! | TTTGTAAGTTGGGGATCCCT+AGG | - | chr1_2:66699786-66699805 | Msa0086120:intron | 45.0% |
| TTACATCCTGCCAATACTCG+AGG | + | chr1_2:66700092-66700111 | None:intergenic | 45.0% | |
| !! | GAGTATTGGCAGGATGTAAG+AGG | - | chr1_2:66700093-66700112 | Msa0086120:intron | 45.0% |
| TAAAGCAGCTAAAAGAGGGC+TGG | + | chr1_2:66700198-66700217 | None:intergenic | 45.0% | |
| AACCAAAGCTTAGGTGGAGT+TGG | - | chr1_2:66700702-66700721 | Msa0086120:intron | 45.0% | |
| AACCAACTCCACCTAAGCTT+TGG | + | chr1_2:66700707-66700726 | None:intergenic | 45.0% | |
| GATATTTCAGTCGGTCCAGA+CGG | + | chr1_2:66701011-66701030 | None:intergenic | 45.0% | |
| ! | TGACCTTCAGCTGCTTTCTT+TGG | + | chr1_2:66701037-66701056 | None:intergenic | 45.0% |
| TGCCATCTAAAAAGGCTTGG+CGG | + | chr1_2:66701390-66701409 | None:intergenic | 45.0% | |
| !! | TATTTTTGATTCCGGCCTGC+AGG | - | chr1_2:66701616-66701635 | Msa0086120:intron | 45.0% |
| !! | ATTTTTGATTCCGGCCTGCA+GGG | - | chr1_2:66701617-66701636 | Msa0086120:intron | 45.0% |
| TACATCTTGCTGAAGCCCTT+GGG | - | chr1_2:66701644-66701663 | Msa0086120:intron | 45.0% | |
| !! | TTAAAAGGCACCGAGAAAGG+GGG | + | chr1_2:66701889-66701908 | None:intergenic | 45.0% |
| ATATGCATTTCCCCACCCTT+TGG | - | chr1_2:66701955-66701974 | Msa0086120:intron | 45.0% | |
| TTTGAGAAACACGCGCCAAA+GGG | + | chr1_2:66701973-66701992 | None:intergenic | 45.0% | |
| TAAGACAGCTGCAAATGGCA+AGG | + | chr1_2:66702107-66702126 | None:intergenic | 45.0% | |
| GTGGATCTACTGATATGGTG+GGG | - | chr1_2:66702134-66702153 | Msa0086120:intron | 45.0% | |
| GCATACTTCAGCATGTATCG+TGG | - | chr1_2:66702212-66702231 | Msa0086120:intron | 45.0% | |
| CATAAGTAACGACCAACTCC+TGG | + | chr1_2:66703048-66703067 | None:intergenic | 45.0% | |
| GGGAATTATAGACCGAGGTT+GGG | - | chr1_2:66703852-66703871 | Msa0086120:intron | 45.0% | |
| GGAATTATAGACCGAGGTTG+GGG | - | chr1_2:66703853-66703872 | Msa0086120:intron | 45.0% | |
| CAAACTTGAATCAGTCCGAC+TGG | + | chr1_2:66704196-66704215 | None:intergenic | 45.0% | |
| TTGAGGAATGCCCTCATGAT+TGG | - | chr1_2:66704416-66704435 | Msa0086120:intron | 45.0% | |
| GAGGAAACAGCCAATCATGA+GGG | + | chr1_2:66704429-66704448 | None:intergenic | 45.0% | |
| TGAGGAAACAGCCAATCATG+AGG | + | chr1_2:66704430-66704449 | None:intergenic | 45.0% | |
| GTTTCCTCAATGTTCTGCTG+TGG | - | chr1_2:66704441-66704460 | Msa0086120:intron | 45.0% | |
| CTAACCACAGCAGAACATTG+AGG | + | chr1_2:66704448-66704467 | None:intergenic | 45.0% | |
| GAAAAATTGGAGGGGTCACA+AGG | - | chr1_2:66704512-66704531 | Msa0086120:intron | 45.0% | |
| AATTTGCAGGTGCATCATGG+TGG | - | chr1_2:66704578-66704597 | Msa0086120:intron | 45.0% | |
| TCGGATATTGGAATTGGAGC+AGG | + | chr1_2:66704892-66704911 | None:intergenic | 45.0% | |
| AAAATTCATGCTCCAGCCAG+AGG | - | chr1_2:66704942-66704961 | Msa0086120:intron | 45.0% | |
| ACTACACATTTACCTCTGGC+TGG | + | chr1_2:66704957-66704976 | None:intergenic | 45.0% | |
| TCAGGTGAAATCTCGGACAA+TGG | - | chr1_2:66705044-66705063 | Msa0086120:CDS | 45.0% | |
| TCTTCCACATGAGATGGAGT+TGG | + | chr1_2:66705156-66705175 | None:intergenic | 45.0% | |
| !! | AAGTGGTGTTGTTTGCCTTG+TGG | - | chr1_2:66705222-66705241 | Msa0086120:five_prime_UTR | 45.0% |
| !! | CTTACATGAAGAGCGTTGCT+AGG | - | chr1_2:66705527-66705546 | Msa0086120:five_prime_UTR | 45.0% |
| !! | TTCTTAAAATTATATAAAAA+TGG | - | chr1_2:66697219-66697238 | Msa0086120:three_prime_UTR | 5.0% |
| !!! | GAAAAAATTATTTTTTTAAA+AGG | + | chr1_2:66701904-66701923 | None:intergenic | 5.0% |
| !!! | AATATATATTTTCTATTATT+AGG | - | chr1_2:66704015-66704034 | Msa0086120:intron | 5.0% |
| CTTCCCCTCTCCTTAGATGA+AGG | + | chr1_2:66697768-66697787 | None:intergenic | 50.0% | |
| CCAATCACACCTTCCACTTG+CGG | - | chr1_2:66698257-66698276 | Msa0086120:intron | 50.0% | |
| CAATCACACCTTCCACTTGC+GGG | - | chr1_2:66698258-66698277 | Msa0086120:intron | 50.0% | |
| AATCACACCTTCCACTTGCG+GGG | - | chr1_2:66698259-66698278 | Msa0086120:intron | 50.0% | |
| ! | ACCCTGGTGCCAATTTCAGT+GGG | + | chr1_2:66698307-66698326 | None:intergenic | 50.0% |
| ! | TACCCTGGTGCCAATTTCAG+TGG | + | chr1_2:66698308-66698327 | None:intergenic | 50.0% |
| GGTCTCAGGTTTGATTACCC+TGG | + | chr1_2:66698323-66698342 | None:intergenic | 50.0% | |
| CAAACCTGAGACCTTGAGAG+CGG | - | chr1_2:66698330-66698349 | Msa0086120:CDS | 50.0% | |
| !! | TGGTGTTTGACTTGGGACCT+TGG | + | chr1_2:66698362-66698381 | None:intergenic | 50.0% |
| !! | GCATGGGTGTTGGCAAATAG+TGG | - | chr1_2:66698627-66698646 | Msa0086120:intron | 50.0% |
| CAGAAAAGAGAGGGCTTCGA+AGG | - | chr1_2:66699013-66699032 | Msa0086120:intron | 50.0% | |
| CAGACTGTCAGAGGATGAGA+AGG | - | chr1_2:66699053-66699072 | Msa0086120:intron | 50.0% | |
| TTTGAAGAGTCGGTAGCGAG+CGG | - | chr1_2:66699369-66699388 | Msa0086120:intron | 50.0% | |
| CTCTTCGCAATGGCCACAAA+AGG | + | chr1_2:66699480-66699499 | None:intergenic | 50.0% | |
| TGCCTGAAGTCTCTTCGCAA+TGG | + | chr1_2:66699490-66699509 | None:intergenic | 50.0% | |
| ! | AGGAGTATGGTCATCGCGTT+AGG | - | chr1_2:66699994-66700013 | Msa0086120:CDS | 50.0% |
| TGCCAGCCTAGAACTGCATA+TGG | - | chr1_2:66700473-66700492 | Msa0086120:CDS | 50.0% | |
| !! | GTCCATATGCAGTTCTAGGC+TGG | + | chr1_2:66700478-66700497 | None:intergenic | 50.0% |
| ! | NNCCAAATCAGGTGCTGTGC+AGG | + | chr1_2:66701081-66701100 | None:intergenic | 50.0% |
| ATTGCAAACCCTCCCGCATA+TGG | - | chr1_2:66701231-66701250 | Msa0086120:intron | 50.0% | |
| ATCACTCACCATATGCGGGA+GGG | + | chr1_2:66701242-66701261 | None:intergenic | 50.0% | |
| AATCACTCACCATATGCGGG+AGG | + | chr1_2:66701243-66701262 | None:intergenic | 50.0% | |
| GTACATCTTGCTGAAGCCCT+TGG | - | chr1_2:66701643-66701662 | Msa0086120:intron | 50.0% | |
| ACATCTTGCTGAAGCCCTTG+GGG | - | chr1_2:66701645-66701664 | Msa0086120:intron | 50.0% | |
| GATGTGAATAGGCACCCCAA+GGG | + | chr1_2:66701662-66701681 | None:intergenic | 50.0% | |
| AGATGTGAATAGGCACCCCA+AGG | + | chr1_2:66701663-66701682 | None:intergenic | 50.0% | |
| GGGTGGGGAAATGCATATGT+TGG | + | chr1_2:66701953-66701972 | None:intergenic | 50.0% | |
| ! | CTTTGAGAAACACGCGCCAA+AGG | + | chr1_2:66701974-66701993 | None:intergenic | 50.0% |
| GGACTCCACATATAGGCAGT+TGG | + | chr1_2:66702254-66702273 | None:intergenic | 50.0% | |
| GCATCCTTGTCCATACCACT+TGG | + | chr1_2:66702293-66702312 | None:intergenic | 50.0% | |
| GTCAAACTATCAACCACGGG+AGG | - | chr1_2:66702767-66702786 | Msa0086120:intron | 50.0% | |
| CATTGGAGAAAATCCTCCCG+TGG | + | chr1_2:66702783-66702802 | None:intergenic | 50.0% | |
| ! | CACGGGAGGATTTTCTCCAA+TGG | - | chr1_2:66702781-66702800 | Msa0086120:intron | 50.0% |
| CAACGGGGAATTATAGACCG+AGG | - | chr1_2:66703847-66703866 | Msa0086120:intron | 50.0% | |
| GGGGAATTATAGACCGAGGT+TGG | - | chr1_2:66703851-66703870 | Msa0086120:intron | 50.0% | |
| !! | CATGAGGGCATTCCTCAAGA+AGG | + | chr1_2:66704414-66704433 | None:intergenic | 50.0% |
| TCCATCTCATGTGGAAGACG+AGG | - | chr1_2:66705158-66705177 | Msa0086120:five_prime_UTR | 50.0% | |
| TCCTCGTCTTCCACATGAGA+TGG | + | chr1_2:66705162-66705181 | None:intergenic | 50.0% | |
| !! | TGGTGTTGTTTGCCTTGTGG+TGG | - | chr1_2:66705225-66705244 | Msa0086120:five_prime_UTR | 50.0% |
| GGAGAGGGGAAGCCAATCAT+CGG | - | chr1_2:66697776-66697795 | Msa0086120:intron | 55.0% | |
| ! | CCGCAAGTGGAAGGTGTGAT+TGG | + | chr1_2:66698260-66698279 | None:intergenic | 55.0% |
| CTTTAAATGGGCCCCGCAAG+TGG | + | chr1_2:66698273-66698292 | None:intergenic | 55.0% | |
| AGCCCACTGAAATTGGCACC+AGG | - | chr1_2:66698302-66698321 | Msa0086120:intron | 55.0% | |
| GCCCACTGAAATTGGCACCA+GGG | - | chr1_2:66698303-66698322 | Msa0086120:CDS | 55.0% | |
| ! | CTTGGATTGTGCCGCTCTCA+AGG | + | chr1_2:66698344-66698363 | None:intergenic | 55.0% |
| CTTGAGAGCGGCACAATCCA+AGG | - | chr1_2:66698342-66698361 | Msa0086120:CDS | 55.0% | |
| AGTGTAGCCCTGTAGCGTAG+TGG | - | chr1_2:66698738-66698757 | Msa0086120:intron | 55.0% | |
| AGGATGTAAGCATGCACCCC+CGG | + | chr1_2:66698798-66698817 | None:intergenic | 55.0% | |
| GGCCATTGCGAAGAGACTTC+AGG | - | chr1_2:66699485-66699504 | Msa0086120:intron | 55.0% | |
| GGGTGGTGATCCTCGAGTAT+TGG | - | chr1_2:66700079-66700098 | Msa0086120:intron | 55.0% | |
| !! | GGTGATCCTCGAGTATTGGC+AGG | - | chr1_2:66700083-66700102 | Msa0086120:intron | 55.0% |
| ! | AAATCAGGTGCTGTGCAGGC+TGG | + | chr1_2:66701077-66701096 | None:intergenic | 55.0% |
| AGCCTGCACAGCACCTGATT+TGG | - | chr1_2:66701076-66701095 | Msa0086120:CDS | 55.0% | |
| CTGAGCTGTGAAGGGAATGC+CGG | + | chr1_2:66701205-66701224 | None:intergenic | 55.0% | |
| ! | CGCCGCCAAGCCTTTTTAGA+TGG | - | chr1_2:66701385-66701404 | Msa0086120:intron | 55.0% |
| GCAAGATGTACATGCCCTGC+AGG | + | chr1_2:66701634-66701653 | None:intergenic | 55.0% | |
| AGAAACACGCGCCAAAGGGT+GGG | + | chr1_2:66701969-66701988 | None:intergenic | 55.0% | |
| GCGCGTGTTTCTCAAAGTGC+TGG | - | chr1_2:66701977-66701996 | Msa0086120:intron | 55.0% | |
| ! | CTGATATGGTGGGGAATGCG+AGG | - | chr1_2:66702143-66702162 | Msa0086120:intron | 55.0% |
| ! | ATGGTGGGATTTCGCATGCC+AGG | - | chr1_2:66703027-66703046 | Msa0086120:intron | 55.0% |
| GGATTTCGCATGCCAGGAGT+TGG | - | chr1_2:66703033-66703052 | Msa0086120:intron | 55.0% | |
| ACCGAGGTTGGGGCAATCTA+GGG | - | chr1_2:66703863-66703882 | Msa0086120:intron | 55.0% | |
| TCCCTAGATTGCCCCAACCT+CGG | + | chr1_2:66703867-66703886 | None:intergenic | 55.0% | |
| GTTGGCAGCAGTAGCTCATC+AGG | + | chr1_2:66705138-66705157 | None:intergenic | 55.0% | |
| GCTGCCAACTCCATCTCATG+TGG | - | chr1_2:66705149-66705168 | Msa0086120:five_prime_UTR | 55.0% | |
| AAATGGGCCCCGCAAGTGGA+AGG | + | chr1_2:66698269-66698288 | None:intergenic | 60.0% | |
| ! | TGTGCCGCTCTCAAGGTCTC+AGG | + | chr1_2:66698337-66698356 | None:intergenic | 60.0% |
| ACTCGAGGATCACCACCCAG+AGG | + | chr1_2:66700077-66700096 | None:intergenic | 60.0% | |
| CGGCATTCCCTTCACAGCTC+AGG | - | chr1_2:66701203-66701222 | Msa0086120:intron | 60.0% | |
| GATGTACATGCCCTGCAGGC+CGG | + | chr1_2:66701630-66701649 | None:intergenic | 60.0% | |
| !! | AAAGGCACCGAGAAAGGGGG+TGG | + | chr1_2:66701886-66701905 | None:intergenic | 60.0% |
| GAAACACGCGCCAAAGGGTG+GGG | + | chr1_2:66701968-66701987 | None:intergenic | 60.0% | |
| GAGAAACACGCGCCAAAGGG+TGG | + | chr1_2:66701970-66701989 | None:intergenic | 60.0% | |
| GACCGAGGTTGGGGCAATCT+AGG | - | chr1_2:66703862-66703881 | Msa0086120:intron | 60.0% | |
| TGGAGGGGTCACAAGGGTTC+TGG | - | chr1_2:66704519-66704538 | Msa0086120:intron | 60.0% | |
| ! | GCAGGTGCATCATGGTGGAG+CGG | - | chr1_2:66704583-66704602 | Msa0086120:intron | 60.0% |
| ! | CAGGTGCATCATGGTGGAGC+GGG | - | chr1_2:66704584-66704603 | Msa0086120:intron | 60.0% |
| ! | TCATGGTGGAGCGGGAACCA+CGG | - | chr1_2:66704592-66704611 | Msa0086120:intron | 60.0% |
| GCAGTAGCTCATCAGGCAGG+TGG | + | chr1_2:66705131-66705150 | None:intergenic | 60.0% | |
| GCAGCAGTAGCTCATCAGGC+AGG | + | chr1_2:66705134-66705153 | None:intergenic | 60.0% | |
| GGAGCGGGAACCACGGCTAC+AGG | - | chr1_2:66704599-66704618 | Msa0086120:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 66697197 | 66705568 | 66697197 | ID=Msa0086120;Name=Msa0086120 |
| chr1_2 | mRNA | 66697197 | 66705568 | 66697197 | ID=Msa0086120-mRNA-1;Parent=Msa0086120;Name=Msa0086120-mRNA-1;_AED=0.12;_eAED=0.12;_QI=433|0.83|0.92|1|1|1|13|314|563 |
| chr1_2 | exon | 66697197 | 66697717 | 66697197 | ID=Msa0086120-mRNA-1:exon:22549;Parent=Msa0086120-mRNA-1 |
| chr1_2 | exon | 66697802 | 66697951 | 66697802 | ID=Msa0086120-mRNA-1:exon:22548;Parent=Msa0086120-mRNA-1 |
| chr1_2 | exon | 66698131 | 66698178 | 66698131 | ID=Msa0086120-mRNA-1:exon:22547;Parent=Msa0086120-mRNA-1 |
| chr1_2 | exon | 66698303 | 66698379 | 66698303 | ID=Msa0086120-mRNA-1:exon:22546;Parent=Msa0086120-mRNA-1 |
| chr1_2 | exon | 66698876 | 66698978 | 66698876 | ID=Msa0086120-mRNA-1:exon:22545;Parent=Msa0086120-mRNA-1 |
| chr1_2 | exon | 66699917 | 66700047 | 66699917 | ID=Msa0086120-mRNA-1:exon:22544;Parent=Msa0086120-mRNA-1 |
| chr1_2 | exon | 66700469 | 66700646 | 66700469 | ID=Msa0086120-mRNA-1:exon:22543;Parent=Msa0086120-mRNA-1 |
| chr1_2 | exon | 66700759 | 66700816 | 66700759 | ID=Msa0086120-mRNA-1:exon:22542;Parent=Msa0086120-mRNA-1 |
| chr1_2 | exon | 66701064 | 66701127 | 66701064 | ID=Msa0086120-mRNA-1:exon:22541;Parent=Msa0086120-mRNA-1 |
| chr1_2 | exon | 66702658 | 66702769 | 66702658 | ID=Msa0086120-mRNA-1:exon:22540;Parent=Msa0086120-mRNA-1 |
| chr1_2 | exon | 66703259 | 66703501 | 66703259 | ID=Msa0086120-mRNA-1:exon:22539;Parent=Msa0086120-mRNA-1 |
| chr1_2 | exon | 66703691 | 66703818 | 66703691 | ID=Msa0086120-mRNA-1:exon:22538;Parent=Msa0086120-mRNA-1 |
| chr1_2 | exon | 66704943 | 66705568 | 66704943 | ID=Msa0086120-mRNA-1:exon:22537;Parent=Msa0086120-mRNA-1 |
| chr1_2 | five_prime_UTR | 66705136 | 66705568 | 66705136 | ID=Msa0086120-mRNA-1:five_prime_utr;Parent=Msa0086120-mRNA-1 |
| chr1_2 | CDS | 66704943 | 66705135 | 66704943 | ID=Msa0086120-mRNA-1:cds;Parent=Msa0086120-mRNA-1 |
| chr1_2 | CDS | 66703691 | 66703818 | 66703691 | ID=Msa0086120-mRNA-1:cds;Parent=Msa0086120-mRNA-1 |
| chr1_2 | CDS | 66703259 | 66703501 | 66703259 | ID=Msa0086120-mRNA-1:cds;Parent=Msa0086120-mRNA-1 |
| chr1_2 | CDS | 66702658 | 66702769 | 66702658 | ID=Msa0086120-mRNA-1:cds;Parent=Msa0086120-mRNA-1 |
| chr1_2 | CDS | 66701064 | 66701127 | 66701064 | ID=Msa0086120-mRNA-1:cds;Parent=Msa0086120-mRNA-1 |
| chr1_2 | CDS | 66700759 | 66700816 | 66700759 | ID=Msa0086120-mRNA-1:cds;Parent=Msa0086120-mRNA-1 |
| chr1_2 | CDS | 66700469 | 66700646 | 66700469 | ID=Msa0086120-mRNA-1:cds;Parent=Msa0086120-mRNA-1 |
| chr1_2 | CDS | 66699917 | 66700047 | 66699917 | ID=Msa0086120-mRNA-1:cds;Parent=Msa0086120-mRNA-1 |
| chr1_2 | CDS | 66698876 | 66698978 | 66698876 | ID=Msa0086120-mRNA-1:cds;Parent=Msa0086120-mRNA-1 |
| chr1_2 | CDS | 66698303 | 66698379 | 66698303 | ID=Msa0086120-mRNA-1:cds;Parent=Msa0086120-mRNA-1 |
| chr1_2 | CDS | 66698131 | 66698178 | 66698131 | ID=Msa0086120-mRNA-1:cds;Parent=Msa0086120-mRNA-1 |
| chr1_2 | CDS | 66697802 | 66697951 | 66697802 | ID=Msa0086120-mRNA-1:cds;Parent=Msa0086120-mRNA-1 |
| chr1_2 | CDS | 66697511 | 66697717 | 66697511 | ID=Msa0086120-mRNA-1:cds;Parent=Msa0086120-mRNA-1 |
| chr1_2 | three_prime_UTR | 66697197 | 66697510 | 66697197 | ID=Msa0086120-mRNA-1:three_prime_utr;Parent=Msa0086120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
