Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118440 | XP_003624695.1 | 98.872 | 266 | 3 | 0 | 1 | 266 | 1 | 266 | 0.0 | 532 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118440 | sp|Q2G6G9|RL25_NOVAD | 29.480 | 173 | 100 | 3 | 56 | 228 | 9 | 159 | 3.61e-19 | 86.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118440 | Q2HVB5 | 98.872 | 266 | 3 | 0 | 1 | 266 | 1 | 266 | 0.0 | 532 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0088610 | Msa1118440 | 0.827211 | 1.772894e-54 | -8.615850e-47 |
| Msa0621210 | Msa1118440 | 0.824317 | 8.617700e-54 | -8.615850e-47 |
| Msa1071040 | Msa1118440 | 0.993458 | 7.060628e-200 | -8.615850e-47 |
| Msa0291960 | Msa1118440 | 0.830894 | 2.270873e-55 | -8.615850e-47 |
| Msa0329930 | Msa1118440 | 0.847209 | 1.336523e-59 | -8.615850e-47 |
| Msa0333220 | Msa1118440 | 0.854268 | 1.378084e-61 | -8.615850e-47 |
| Msa1118440 | Msa1159030 | 0.982084 | 3.432800e-154 | -8.615850e-47 |
| Msa1118440 | Msa1279780 | 0.802755 | 4.825040e-49 | -8.615850e-47 |
| Msa1118440 | Msa1321200 | 0.815171 | 1.059748e-51 | -8.615850e-47 |
| Msa1118440 | Msa1340560 | 0.970443 | 1.263755e-131 | -8.615850e-47 |
| Msa1118440 | Msa1428870 | 0.821172 | 4.649689e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118440 | MtrunA17_Chr7g0253991 | 98.872 | 266 | 3 | 0 | 1 | 266 | 1 | 266 | 0.0 | 532 |
| Msa1118440 | MtrunA17_Chr8g0374611 | 37.981 | 208 | 116 | 3 | 53 | 253 | 32 | 233 | 7.56e-43 | 146 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118440 | AT4G23620.1 | 66.794 | 262 | 77 | 3 | 5 | 265 | 7 | 259 | 2.72e-121 | 347 |
| Msa1118440 | AT4G23620.2 | 63.636 | 275 | 77 | 4 | 5 | 265 | 7 | 272 | 1.09e-117 | 338 |
| Msa1118440 | AT5G66860.1 | 40.476 | 210 | 112 | 4 | 52 | 254 | 34 | 237 | 1.68e-44 | 151 |
Find 104 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGCTGTTTGTAAAATTA+TGG | 0.157665 | 7_3:-67102854 | Msa1118440:CDS |
| CTTTGAATGTGACATTTATA+AGG | 0.212828 | 7_3:-67106637 | Msa1118440:CDS |
| CTTAAATCCACATCAATATA+TGG | 0.221639 | 7_3:+67102955 | None:intergenic |
| TTACAAACAGCTTCATCTTT+TGG | 0.245961 | 7_3:+67102862 | None:intergenic |
| GTAACTACTTATTGTATCTT+TGG | 0.251706 | 7_3:-67102794 | Msa1118440:exon |
| TCGATGATGTCTTCGTCATT+AGG | 0.273733 | 7_3:+67106797 | None:intergenic |
| CCATCTTATTAGTTGATTCT+TGG | 0.275557 | 7_3:-67102718 | Msa1118440:three_prime_UTR |
| TCGTACTTTGGGTTAGGTTT+TGG | 0.283728 | 7_3:+67107064 | None:intergenic |
| CGATGATGTCTTCGTCATTA+GGG | 0.292294 | 7_3:+67106798 | None:intergenic |
| TACCGACCTTGTATGTTTAT+CGG | 0.318046 | 7_3:-67102558 | Msa1118440:three_prime_UTR |
| GGATGGTTTCGTCGTACTTT+GGG | 0.321382 | 7_3:+67107053 | None:intergenic |
| GCCATTCCCCGCAAAGATTC+CGG | 0.324964 | 7_3:-67107028 | Msa1118440:CDS |
| GGTTTGAATCTGAATCAAAT+TGG | 0.344633 | 7_3:+67106819 | None:intergenic |
| AGTGGCGGCGGTGGAGGAAG+GGG | 0.363667 | 7_3:+67107167 | None:intergenic |
| GAAAGCCGTCGAGGTAGGTT+AGG | 0.367957 | 7_3:+67107086 | None:intergenic |
| TTTGAATGTGACATTTATAA+GGG | 0.368199 | 7_3:-67106636 | Msa1118440:CDS |
| ACTTGCTCAATATAAATGTT+TGG | 0.372718 | 7_3:+67102479 | None:intergenic |
| TGGCTCTGGAGTGTGGATTA+AGG | 0.373199 | 7_3:+67107126 | None:intergenic |
| GGAAGGGGCGGAGGAGTGTG+CGG | 0.375525 | 7_3:+67107182 | None:intergenic |
| GGCGGTGGAGGAAGGGGCGG+AGG | 0.376055 | 7_3:+67107173 | None:intergenic |
| TGGCGGAGAAGTGGCGGCGG+TGG | 0.378382 | 7_3:+67107158 | None:intergenic |
| CCGTTCGTTCCGATCAGATC+AGG | 0.382550 | 7_3:-67106907 | Msa1118440:CDS |
| CGGAGAAGTGGCGGCGGTGG+AGG | 0.383273 | 7_3:+67107161 | None:intergenic |
| GAAGCTGTTTGTAAAATTAT+GGG | 0.386857 | 7_3:-67102853 | Msa1118440:CDS |
| GTTTCGTCGTACTTTGGGTT+AGG | 0.390733 | 7_3:+67107058 | None:intergenic |
| TGTAGTATGTGGTCTGGCTC+TGG | 0.392426 | 7_3:+67107112 | None:intergenic |
| GATCACCCATGAGCACCTTC+TGG | 0.393208 | 7_3:+67102917 | None:intergenic |
| GCCGGAATCTTTGCGGGGAA+TGG | 0.394527 | 7_3:+67107027 | None:intergenic |
| AGGATGGTTTCGTCGTACTT+TGG | 0.396008 | 7_3:+67107052 | None:intergenic |
| GCGGCCAACTTTACGCTCCT+TGG | 0.414214 | 7_3:+67106991 | None:intergenic |
| GTTGTGTTTCAGAAACCCTT+TGG | 0.419943 | 7_3:+67102830 | None:intergenic |
| GTGGTGAAGAGAAAGGGTTT+TGG | 0.428880 | 7_3:+67107217 | None:intergenic |
| TCATCTCCTCTGAATACAAT+AGG | 0.430682 | 7_3:+67106581 | None:intergenic |
| TTAAATCCACATCAATATAT+GGG | 0.431795 | 7_3:+67102956 | None:intergenic |
| GAAGTGGCGGCGGTGGAGGA+AGG | 0.435729 | 7_3:+67107165 | None:intergenic |
| GAAGGGGCGGAGGAGTGTGC+GGG | 0.438831 | 7_3:+67107183 | None:intergenic |
| AGAGGAGATGATATATCTCC+TGG | 0.439796 | 7_3:-67106569 | Msa1118440:CDS |
| AAGGGGCGGAGGAGTGTGCG+GGG | 0.441342 | 7_3:+67107184 | None:intergenic |
| TCCGAGCATCGTCTTCGAAC+AGG | 0.442178 | 7_3:-67106966 | Msa1118440:CDS |
| TGACAGATTCATTTGAAAGC+TGG | 0.443599 | 7_3:-67106671 | Msa1118440:intron |
| AAAGCCGTCGAGGTAGGTTA+GGG | 0.451004 | 7_3:+67107087 | None:intergenic |
| AGGGGTTGTAGTATGTGGTC+TGG | 0.453043 | 7_3:+67107106 | None:intergenic |
| AGATACAATAAGTAGTTACT+TGG | 0.457131 | 7_3:+67102798 | None:intergenic |
| TGTGGGCCAGAAGGTGCTCA+TGG | 0.458165 | 7_3:-67102923 | Msa1118440:CDS |
| ATCTAACCTTTCTTGAGTCC+AGG | 0.460897 | 7_3:+67106551 | None:intergenic |
| GGCGGCGGTGGAGGAAGGGG+CGG | 0.466194 | 7_3:+67107170 | None:intergenic |
| TGAGGATAGTTGAGAGGAGA+GGG | 0.466577 | 7_3:+67107259 | None:intergenic |
| TGATGTGGATTTAAGTGAGT+TGG | 0.469740 | 7_3:-67102947 | Msa1118440:CDS |
| TGCATTGTGGTGAAGAGAAA+GGG | 0.471889 | 7_3:+67107211 | None:intergenic |
| TAAGGGCTCCGTCAGATGCT+TGG | 0.483656 | 7_3:-67106619 | Msa1118440:CDS |
| TGTAGAGCTTTGTGTAACTC+AGG | 0.486448 | 7_3:+67102604 | None:intergenic |
| AGGGGCGGAGGAGTGTGCGG+GGG | 0.489766 | 7_3:+67107185 | None:intergenic |
| CAGTTATTGTGAACAAAACT+AGG | 0.490000 | 7_3:+67102669 | None:intergenic |
| TCCTGTTCGAAGACGATGCT+CGG | 0.491020 | 7_3:+67106965 | None:intergenic |
| CTTATAAATGTCACATTCAA+AGG | 0.498069 | 7_3:+67106638 | None:intergenic |
| CCAAGAATCAACTAATAAGA+TGG | 0.498429 | 7_3:+67102718 | None:intergenic |
| ACTACTTATTGTATCTTTGG+TGG | 0.503503 | 7_3:-67102791 | Msa1118440:three_prime_UTR |
| TTGTAAAATTATGGGCCAAA+GGG | 0.504390 | 7_3:-67102845 | Msa1118440:CDS |
| CGGTAGTGAGGATAGTTGAG+AGG | 0.505122 | 7_3:+67107253 | None:intergenic |
| GGATTTAAGTGAGTTGGATG+TGG | 0.507332 | 7_3:-67102941 | Msa1118440:CDS |
| GCCAACTTTACGCTCCTTGG+CGG | 0.509358 | 7_3:+67106994 | None:intergenic |
| ATGCATTGTGGTGAAGAGAA+AGG | 0.514185 | 7_3:+67107210 | None:intergenic |
| AAGTGGCGGCGGTGGAGGAA+GGG | 0.515170 | 7_3:+67107166 | None:intergenic |
| ATATCTCCTGGACTCAAGAA+AGG | 0.519847 | 7_3:-67106557 | Msa1118440:intron |
| TTTGTAAAATTATGGGCCAA+AGG | 0.522313 | 7_3:-67102846 | Msa1118440:CDS |
| TCCGCCAAGGAGCGTAAAGT+TGG | 0.526882 | 7_3:-67106995 | Msa1118440:CDS |
| TGTGGTCTGGCTCTGGAGTG+TGG | 0.529733 | 7_3:+67107119 | None:intergenic |
| CTTCCTTGAATACCATCAAA+AGG | 0.531879 | 7_3:-67103014 | Msa1118440:CDS |
| TGCTCTTCAATACTACGCTC+AGG | 0.532561 | 7_3:+67107302 | None:intergenic |
| ATTGGTGAAGAACTTGAAGA+TGG | 0.535306 | 7_3:+67106837 | None:intergenic |
| AGGTTAGGGGTTGTAGTATG+TGG | 0.536070 | 7_3:+67107101 | None:intergenic |
| GAAGATGGAAGAGGCGTGAG+AGG | 0.537822 | 7_3:+67106852 | None:intergenic |
| GATCGGAACGAACGGAAATG+AGG | 0.538932 | 7_3:+67106915 | None:intergenic |
| GTGAGGATAGTTGAGAGGAG+AGG | 0.539122 | 7_3:+67107258 | None:intergenic |
| TTTGCGGGGAATGGCGAGGA+TGG | 0.546947 | 7_3:+67107036 | None:intergenic |
| CGTTTGCGATGGCGGAGAAG+TGG | 0.551652 | 7_3:+67107149 | None:intergenic |
| GAAGAGGCGTGAGAGGAAGA+AGG | 0.552327 | 7_3:+67106859 | None:intergenic |
| GTGGATTAAGGCGTTTGCGA+TGG | 0.554431 | 7_3:+67107138 | None:intergenic |
| GGCGTGAGAGGAAGAAGGAA+CGG | 0.555683 | 7_3:+67106864 | None:intergenic |
| TTGCGATGGCGGAGAAGTGG+CGG | 0.560803 | 7_3:+67107152 | None:intergenic |
| TAAATCCACATCAATATATG+GGG | 0.566905 | 7_3:+67102957 | None:intergenic |
| GAAGAACTTGAAGATGGAAG+AGG | 0.567823 | 7_3:+67106843 | None:intergenic |
| GACGTTCCTATTGTATTCAG+AGG | 0.569099 | 7_3:-67106587 | Msa1118440:CDS |
| GGAAGAAGGAACGGCCGAGA+TGG | 0.569332 | 7_3:+67106873 | None:intergenic |
| GATTAAGGCGTTTGCGATGG+CGG | 0.573246 | 7_3:+67107141 | None:intergenic |
| ATCGTCTTCGAACAGGAAGA+CGG | 0.582891 | 7_3:-67106959 | Msa1118440:CDS |
| AGGAAACTCGTTAACCATCT+CGG | 0.585561 | 7_3:-67106887 | Msa1118440:CDS |
| GTGGGCCAGAAGGTGCTCAT+GGG | 0.586262 | 7_3:-67102922 | Msa1118440:CDS |
| CCTGATCTGATCGGAACGAA+CGG | 0.594704 | 7_3:+67106907 | None:intergenic |
| AACGAGTTTCCTGATCTGAT+CGG | 0.599141 | 7_3:+67106898 | None:intergenic |
| CGATGGCGGAGAAGTGGCGG+CGG | 0.608841 | 7_3:+67107155 | None:intergenic |
| CGAAGACGATGCTCGGAACG+CGG | 0.618391 | 7_3:+67106972 | None:intergenic |
| TGAGTTGGATGTGGGCCAGA+AGG | 0.624190 | 7_3:-67102932 | Msa1118440:CDS |
| GATTTAAGTGAGTTGGATGT+GGG | 0.629473 | 7_3:-67102940 | Msa1118440:CDS |
| ACTTTCAACCAAGCATCTGA+CGG | 0.637239 | 7_3:+67106611 | None:intergenic |
| AATCTTTGCGGGGAATGGCG+AGG | 0.644316 | 7_3:+67107032 | None:intergenic |
| ATCCGATAAACATACAAGGT+CGG | 0.652992 | 7_3:+67102556 | None:intergenic |
| ACATATCCGATAAACATACA+AGG | 0.655811 | 7_3:+67102552 | None:intergenic |
| AAGCCGTCGAGGTAGGTTAG+GGG | 0.664900 | 7_3:+67107088 | None:intergenic |
| GAACAGGAAGACGGTCAGCA+CGG | 0.669527 | 7_3:-67106950 | Msa1118440:CDS |
| CAACCCCTAACCTACCTCGA+CGG | 0.677651 | 7_3:-67107091 | Msa1118440:CDS |
| AAATCCACATCAATATATGG+GGG | 0.690982 | 7_3:+67102958 | None:intergenic |
| ACTCAAATGCATACACTGCG+AGG | 0.694977 | 7_3:+67106758 | None:intergenic |
| CAGGAAGACGGTCAGCACGG+TGG | 0.739041 | 7_3:-67106947 | Msa1118440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTTATTTTATTGCA+TGG | + | chr7_3:67103621-67103640 | None:intergenic | 10.0% |
| !!! | ATCAATTAATTGTAATTTTA+TGG | - | chr7_3:67103852-67103871 | Msa1118440:intron | 10.0% |
| !!! | AGATTTTTTATAATGAAAAT+AGG | + | chr7_3:67104210-67104229 | None:intergenic | 10.0% |
| !! | ATCATCATTATAAAAAATAT+CGG | + | chr7_3:67105329-67105348 | None:intergenic | 10.0% |
| !! | AAATGCAAATTGATATTAAA+GGG | + | chr7_3:67104619-67104638 | None:intergenic | 15.0% |
| !! | AAAATGCAAATTGATATTAA+AGG | + | chr7_3:67104620-67104639 | None:intergenic | 15.0% |
| !! | ATTTGAAAACATAAAATTGA+TGG | - | chr7_3:67104869-67104888 | Msa1118440:intron | 15.0% |
| !! | AATATATAAAACCAATTTCA+TGG | - | chr7_3:67104966-67104985 | Msa1118440:intron | 15.0% |
| !! | AATTCAGTTACTAATTTAAT+GGG | + | chr7_3:67105036-67105055 | None:intergenic | 15.0% |
| !! | AAATTCAGTTACTAATTTAA+TGG | + | chr7_3:67105037-67105056 | None:intergenic | 15.0% |
| !! | AATATTCACTTAAAATTGAA+TGG | + | chr7_3:67105138-67105157 | None:intergenic | 15.0% |
| !! | TATATATATAGTTAGTACTT+AGG | + | chr7_3:67105213-67105232 | None:intergenic | 15.0% |
| !! | TCATCATTATAAAAAATATC+GGG | + | chr7_3:67105328-67105347 | None:intergenic | 15.0% |
| !! | TTAGTATTTGGTAAATAAAT+AGG | - | chr7_3:67105609-67105628 | Msa1118440:intron | 15.0% |
| !! | ATAATCATTTAATGTTTGAA+TGG | - | chr7_3:67105711-67105730 | Msa1118440:intron | 15.0% |
| !! | AATAATGAAAACATTAATAG+TGG | + | chr7_3:67106262-67106281 | None:intergenic | 15.0% |
| !! | TCTTTGAATAATTGAATTGA+TGG | - | chr7_3:67103040-67103059 | Msa1118440:intron | 20.0% |
| !! | TTTGAATGTGACATTTATAA+GGG | - | chr7_3:67103113-67103132 | Msa1118440:intron | 20.0% |
| !! | GATTGAATTATAGTAAACTA+AGG | - | chr7_3:67103654-67103673 | Msa1118440:intron | 20.0% |
| !! | TTATAGTAAACTAAGGTTAA+TGG | - | chr7_3:67103661-67103680 | Msa1118440:intron | 20.0% |
| !! | AATGCAAATTGATATTAAAG+GGG | + | chr7_3:67104618-67104637 | None:intergenic | 20.0% |
| !!! | AAAGATTTAGACCAATTTTA+TGG | + | chr7_3:67104922-67104941 | None:intergenic | 20.0% |
| !!! | ATTAAATTGGTTTAATCTAG+AGG | + | chr7_3:67105166-67105185 | None:intergenic | 20.0% |
| !! | TCTAGATTAAACCAATTTAA+TGG | - | chr7_3:67105165-67105184 | Msa1118440:intron | 20.0% |
| !! | ACTAACTATATATATATGCT+AGG | - | chr7_3:67105217-67105236 | Msa1118440:intron | 20.0% |
| !! | TTATAATGATGATTAGCATT+TGG | - | chr7_3:67105336-67105355 | Msa1118440:intron | 20.0% |
| !! | TTATCATGATAGTTAGTATT+TGG | - | chr7_3:67105597-67105616 | Msa1118440:intron | 20.0% |
| !! | TAACATATAGTATGTATTGT+AGG | - | chr7_3:67105902-67105921 | Msa1118440:intron | 20.0% |
| !! | ATACAAAGTAAGATTTGTAT+CGG | - | chr7_3:67105925-67105944 | Msa1118440:intron | 20.0% |
| !!! | TTCAAAAATTGATTTCCTTA+TGG | - | chr7_3:67106469-67106488 | Msa1118440:intron | 20.0% |
| !! | ATATATTAATATCCATACCA+AGG | + | chr7_3:67106611-67106630 | None:intergenic | 20.0% |
| !! | TTAAATCCACATCAATATAT+GGG | + | chr7_3:67106796-67106815 | None:intergenic | 20.0% |
| ! | GATTAAACTCACAAATCAAA+AGG | + | chr7_3:67103022-67103041 | None:intergenic | 25.0% |
| !!! | ATTGAATTGATGGATTGTAT+TGG | - | chr7_3:67103050-67103069 | Msa1118440:intron | 25.0% |
| ! | CTTATAAATGTCACATTCAA+AGG | + | chr7_3:67103114-67103133 | None:intergenic | 25.0% |
| ! | CTTTGAATGTGACATTTATA+AGG | - | chr7_3:67103112-67103131 | Msa1118440:intron | 25.0% |
| ! | ACCAAAAATGTCACAAATTA+GGG | + | chr7_3:67103229-67103248 | None:intergenic | 25.0% |
| !!! | TTTTTGGTGTAATAATGTAC+TGG | - | chr7_3:67103241-67103260 | Msa1118440:intron | 25.0% |
| ! | AGAAAAAACAGACAAATTGT+CGG | + | chr7_3:67103365-67103384 | None:intergenic | 25.0% |
| !!! | AGGAGTATTTAACTCTAAAA+AGG | + | chr7_3:67103413-67103432 | None:intergenic | 25.0% |
| ! | AGCTAATGAATTAAAGAAGT+TGG | - | chr7_3:67103522-67103541 | Msa1118440:intron | 25.0% |
| ! | GCTAATGAATTAAAGAAGTT+GGG | - | chr7_3:67103523-67103542 | Msa1118440:intron | 25.0% |
| ! | AATTCAGTAAAGCTCAATTA+CGG | + | chr7_3:67103710-67103729 | None:intergenic | 25.0% |
| ! | TACAAAATCTAATATCCCTT+TGG | - | chr7_3:67103729-67103748 | Msa1118440:intron | 25.0% |
| ! | AGAAGGAAAAATTGTAAACA+TGG | + | chr7_3:67103780-67103799 | None:intergenic | 25.0% |
| !!! | TGATTTTTTGTCATTCTCAA+CGG | + | chr7_3:67103836-67103855 | None:intergenic | 25.0% |
| ! | AATCTTACAAATGAATCCAT+TGG | + | chr7_3:67103920-67103939 | None:intergenic | 25.0% |
| ! | TTCATTTGTAAGATTTGTCA+TGG | - | chr7_3:67103925-67103944 | Msa1118440:intron | 25.0% |
| ! | TTTGTAATTGTATGTCTGTA+TGG | + | chr7_3:67104010-67104029 | None:intergenic | 25.0% |
| ! | CGTAGTTTACTATAATTCAA+TGG | - | chr7_3:67104240-67104259 | Msa1118440:intron | 25.0% |
| ! | TGTATGCATATATATGAGTT+AGG | - | chr7_3:67104371-67104390 | Msa1118440:intron | 25.0% |
| !!! | GTAGGTTTTTGTTTTATTCT+TGG | - | chr7_3:67104494-67104513 | Msa1118440:intron | 25.0% |
| !!! | ATAAGAATTTGTTGGAATAG+AGG | + | chr7_3:67104573-67104592 | None:intergenic | 25.0% |
| ! | CTATTCCAACAAATTCTTAT+AGG | - | chr7_3:67104573-67104592 | Msa1118440:intron | 25.0% |
| ! | CAATTCCTATAAGAATTTGT+TGG | + | chr7_3:67104581-67104600 | None:intergenic | 25.0% |
| ! | ATGCAAATTGATATTAAAGG+GGG | + | chr7_3:67104617-67104636 | None:intergenic | 25.0% |
| !!! | AATTTGCATTTTAAGTCACA+AGG | - | chr7_3:67104628-67104647 | Msa1118440:intron | 25.0% |
| ! | CAATTACTAAAAGCGAAATT+TGG | - | chr7_3:67104681-67104700 | Msa1118440:intron | 25.0% |
| !! | TTTTTATCTGTCCAAAGAAA+GGG | + | chr7_3:67104762-67104781 | None:intergenic | 25.0% |
| !!! | TTTTTTATCTGTCCAAAGAA+AGG | + | chr7_3:67104763-67104782 | None:intergenic | 25.0% |
| ! | AACTTAAAAATTTGTACGAC+AGG | + | chr7_3:67104792-67104811 | None:intergenic | 25.0% |
| !!! | CGTACAAATTTTTAAGTTCA+TGG | - | chr7_3:67104794-67104813 | Msa1118440:intron | 25.0% |
| !! | AAACATAAAATTGATGGCAA+CGG | - | chr7_3:67104875-67104894 | Msa1118440:intron | 25.0% |
| ! | TTTAAGAGGATCCATAAAAT+TGG | - | chr7_3:67104908-67104927 | Msa1118440:intron | 25.0% |
| ! | TTTCATCAAAACCATGAAAT+TGG | + | chr7_3:67104980-67104999 | None:intergenic | 25.0% |
| ! | TGATGAAATTGAAAACTTCA+TGG | - | chr7_3:67104992-67105011 | Msa1118440:intron | 25.0% |
| ! | AACTATATATATATGCTAGG+TGG | - | chr7_3:67105220-67105239 | Msa1118440:intron | 25.0% |
| ! | TTAGCATTTGGTAGATAAAT+AGG | - | chr7_3:67105348-67105367 | Msa1118440:intron | 25.0% |
| !! | GATAAATAGGTTTAAGACTT+TGG | - | chr7_3:67105361-67105380 | Msa1118440:intron | 25.0% |
| ! | ATAACCATTTAATGTATGAG+TGG | - | chr7_3:67105422-67105441 | Msa1118440:intron | 25.0% |
| ! | ATAACCACTCATACATTAAA+TGG | + | chr7_3:67105429-67105448 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTGACAGAGTCT+TGG | + | chr7_3:67105636-67105655 | None:intergenic | 25.0% |
| ! | GACTCTGTCAAAAAAAAAAT+AGG | - | chr7_3:67105637-67105656 | Msa1118440:intron | 25.0% |
| !! | AAAAAATAGGTCTAAGACTT+TGG | - | chr7_3:67105650-67105669 | Msa1118440:intron | 25.0% |
| ! | TAGTTTATACAAAGATCATG+CGG | + | chr7_3:67105785-67105804 | None:intergenic | 25.0% |
| !! | TAAGTCCTTGTTTATATGTT+TGG | + | chr7_3:67105877-67105896 | None:intergenic | 25.0% |
| ! | TTTAGTCAATAAAACGCAAA+AGG | + | chr7_3:67106049-67106068 | None:intergenic | 25.0% |
| !! | TGCTTACAATAGTTTTTACT+TGG | - | chr7_3:67106677-67106696 | Msa1118440:intron | 25.0% |
| ! | TAAATCCACATCAATATATG+GGG | + | chr7_3:67106795-67106814 | None:intergenic | 25.0% |
| ! | CTTAAATCCACATCAATATA+TGG | + | chr7_3:67106797-67106816 | None:intergenic | 25.0% |
| ! | TGAAGCTGTTTGTAAAATTA+TGG | - | chr7_3:67106895-67106914 | Msa1118440:CDS | 25.0% |
| ! | GAAGCTGTTTGTAAAATTAT+GGG | - | chr7_3:67106896-67106915 | Msa1118440:CDS | 25.0% |
| ! | AGATACAATAAGTAGTTACT+TGG | + | chr7_3:67106954-67106973 | None:intergenic | 25.0% |
| ! | GTAACTACTTATTGTATCTT+TGG | - | chr7_3:67106955-67106974 | Msa1118440:CDS | 25.0% |
| ! | ACTTGCTCAATATAAATGTT+TGG | + | chr7_3:67107273-67107292 | None:intergenic | 25.0% |
| GGTTTGAATCTGAATCAAAT+TGG | + | chr7_3:67102933-67102952 | None:intergenic | 30.0% | |
| CAAAAATGTCACAAATTAGG+GGG | + | chr7_3:67103227-67103246 | None:intergenic | 30.0% | |
| CCAAAAATGTCACAAATTAG+GGG | + | chr7_3:67103228-67103247 | None:intergenic | 30.0% | |
| CACCAAAAATGTCACAAATT+AGG | + | chr7_3:67103230-67103249 | None:intergenic | 30.0% | |
| TTGTTTGTCACAATAGTGAA+CGG | + | chr7_3:67103453-67103472 | None:intergenic | 30.0% | |
| AAATTGTAAACATGGTAGGA+GGG | + | chr7_3:67103772-67103791 | None:intergenic | 30.0% | |
| AAAATTGTAAACATGGTAGG+AGG | + | chr7_3:67103773-67103792 | None:intergenic | 30.0% | |
| GGAAAAATTGTAAACATGGT+AGG | + | chr7_3:67103776-67103795 | None:intergenic | 30.0% | |
| ATCGCAAAATGATACATCAA+TGG | + | chr7_3:67103975-67103994 | None:intergenic | 30.0% | |
| ! | ATTGATGTATCATTTTGCGA+TGG | - | chr7_3:67103974-67103993 | Msa1118440:intron | 30.0% |
| GCACAAAATTATCACAAACA+TGG | - | chr7_3:67104063-67104082 | Msa1118440:intron | 30.0% | |
| CAAAATTATCACAAACATGG+CGG | - | chr7_3:67104066-67104085 | Msa1118440:intron | 30.0% | |
| ACAAATTAGGAGAGAAATCA+GGG | + | chr7_3:67104132-67104151 | None:intergenic | 30.0% | |
| AACAAATTAGGAGAGAAATC+AGG | + | chr7_3:67104133-67104152 | None:intergenic | 30.0% | |
| !! | TCCTAATTTGTTTGCCAAAA+CGG | - | chr7_3:67104141-67104160 | Msa1118440:intron | 30.0% |
| ! | AAAATTTGATATCCCCGTTT+TGG | + | chr7_3:67104158-67104177 | None:intergenic | 30.0% |
| GAAACGAGAACAATTAATCA+TGG | + | chr7_3:67104266-67104285 | None:intergenic | 30.0% | |
| TCGCTCCCTATATATATTAA+AGG | - | chr7_3:67104314-67104333 | Msa1118440:intron | 30.0% | |
| CGCTCCCTATATATATTAAA+GGG | - | chr7_3:67104315-67104334 | Msa1118440:intron | 30.0% | |
| GCTGCCCTTTAATATATATA+GGG | + | chr7_3:67104322-67104341 | None:intergenic | 30.0% | |
| TATGCATACAATACACCAAA+TGG | + | chr7_3:67104361-67104380 | None:intergenic | 30.0% | |
| GATTAAAAGTTTAGACCGTT+TGG | + | chr7_3:67104414-67104433 | None:intergenic | 30.0% | |
| GAATAGAGGTGAAATTTCAT+CGG | + | chr7_3:67104559-67104578 | None:intergenic | 30.0% | |
| AAATTGATATTAAAGGGGGA+AGG | + | chr7_3:67104613-67104632 | None:intergenic | 30.0% | |
| !! | AGCTAATTGAAGAGAGTATT+AGG | - | chr7_3:67104654-67104673 | Msa1118440:intron | 30.0% |
| TAAAAGCGAAATTTGGACAA+AGG | - | chr7_3:67104688-67104707 | Msa1118440:intron | 30.0% | |
| ATGGATCCTCTTAAAGATTT+AGG | + | chr7_3:67104903-67104922 | None:intergenic | 30.0% | |
| TTAGTAACTGAATTTCTGTG+CGG | - | chr7_3:67105042-67105061 | Msa1118440:intron | 30.0% | |
| CCAAATCTCATCCATTAAAT+TGG | + | chr7_3:67105179-67105198 | None:intergenic | 30.0% | |
| ! | CCAATTTAATGGATGAGATT+TGG | - | chr7_3:67105176-67105195 | Msa1118440:intron | 30.0% |
| ATAAGCTGTTTAATGCTTAC+AGG | - | chr7_3:67105451-67105470 | Msa1118440:intron | 30.0% | |
| TAAGCTGTTTAATGCTTACA+GGG | - | chr7_3:67105452-67105471 | Msa1118440:intron | 30.0% | |
| CTCTTCCAAACATATAAACA+AGG | - | chr7_3:67105869-67105888 | Msa1118440:intron | 30.0% | |
| AAAACCTGAGTTTATGTGAT+GGG | - | chr7_3:67106427-67106446 | Msa1118440:intron | 30.0% | |
| GAATAGTGAAAAACTCCATA+AGG | + | chr7_3:67106487-67106506 | None:intergenic | 30.0% | |
| AAGATTTATGCCTATGTTGA+TGG | - | chr7_3:67106514-67106533 | Msa1118440:intron | 30.0% | |
| AAGTCAGAAATGTCCAATAA+TGG | + | chr7_3:67106554-67106573 | None:intergenic | 30.0% | |
| ! | ATACTTAACAGTCCTTTTGA+TGG | + | chr7_3:67106750-67106769 | None:intergenic | 30.0% |
| AAATCCACATCAATATATGG+GGG | + | chr7_3:67106794-67106813 | None:intergenic | 30.0% | |
| ! | TACAAACAGCTTCATCTTTT+GGG | + | chr7_3:67106889-67106908 | None:intergenic | 30.0% |
| ! | TTACAAACAGCTTCATCTTT+TGG | + | chr7_3:67106890-67106909 | None:intergenic | 30.0% |
| TTTGTAAAATTATGGGCCAA+AGG | - | chr7_3:67106903-67106922 | Msa1118440:CDS | 30.0% | |
| TTGTAAAATTATGGGCCAAA+GGG | - | chr7_3:67106904-67106923 | Msa1118440:CDS | 30.0% | |
| !! | AGTAGTTACTTGGTTTTCTT+TGG | + | chr7_3:67106944-67106963 | None:intergenic | 30.0% |
| ACTACTTATTGTATCTTTGG+TGG | - | chr7_3:67106958-67106977 | Msa1118440:CDS | 30.0% | |
| CCAAGAATCAACTAATAAGA+TGG | + | chr7_3:67107034-67107053 | None:intergenic | 30.0% | |
| ! | CCATCTTATTAGTTGATTCT+TGG | - | chr7_3:67107031-67107050 | Msa1118440:CDS | 30.0% |
| CAGTTATTGTGAACAAAACT+AGG | + | chr7_3:67107083-67107102 | None:intergenic | 30.0% | |
| ACATATCCGATAAACATACA+AGG | + | chr7_3:67107200-67107219 | None:intergenic | 30.0% | |
| !! | TATTTTTGCCGGAATCTTTG+CGG | + | chr7_3:67102732-67102751 | None:intergenic | 35.0% |
| ATTGGTGAAGAACTTGAAGA+TGG | + | chr7_3:67102915-67102934 | None:intergenic | 35.0% | |
| TGACAGATTCATTTGAAAGC+TGG | - | chr7_3:67103078-67103097 | Msa1118440:intron | 35.0% | |
| TCATCTCCTCTGAATACAAT+AGG | + | chr7_3:67103171-67103190 | None:intergenic | 35.0% | |
| !! | CCCCTAATTTGTGACATTTT+TGG | - | chr7_3:67103225-67103244 | Msa1118440:intron | 35.0% |
| ! | GAGTTAAATACTCCTGCTTT+TGG | - | chr7_3:67103418-67103437 | Msa1118440:intron | 35.0% |
| TATCCCTTTGGCAAACAAAT+AGG | - | chr7_3:67103741-67103760 | Msa1118440:intron | 35.0% | |
| CTAAAGCAACGATCATAAGA+AGG | + | chr7_3:67103797-67103816 | None:intergenic | 35.0% | |
| ! | CTTCTTATGATCGTTGCTTT+AGG | - | chr7_3:67103795-67103814 | Msa1118440:intron | 35.0% |
| TACTATTTGCCAAATGCCAA+TGG | - | chr7_3:67103901-67103920 | Msa1118440:intron | 35.0% | |
| CAAATGAATCCATTGGCATT+TGG | + | chr7_3:67103913-67103932 | None:intergenic | 35.0% | |
| !! | CCTAATTTGTTTGCCAAAAC+GGG | - | chr7_3:67104142-67104161 | Msa1118440:intron | 35.0% |
| !! | CTAATTTGTTTGCCAAAACG+GGG | - | chr7_3:67104143-67104162 | Msa1118440:intron | 35.0% |
| GGCTGCCCTTTAATATATAT+AGG | + | chr7_3:67104323-67104342 | None:intergenic | 35.0% | |
| ATATATATTAAAGGGCAGCC+CGG | - | chr7_3:67104323-67104342 | Msa1118440:intron | 35.0% | |
| CATACAATACACCAAATGGT+GGG | + | chr7_3:67104357-67104376 | None:intergenic | 35.0% | |
| AAGTTTAGACCGTTTGGATT+TGG | + | chr7_3:67104408-67104427 | None:intergenic | 35.0% | |
| ! | GGTCTAAACTTTTAATCGAG+CGG | - | chr7_3:67104417-67104436 | Msa1118440:intron | 35.0% |
| CATCTACATGATAACTTGAG+TGG | - | chr7_3:67104449-67104468 | Msa1118440:intron | 35.0% | |
| CAAAGGTTATACCCTTTCTT+TGG | - | chr7_3:67104748-67104767 | Msa1118440:intron | 35.0% | |
| AAAAATTTGTACGACAGGCA+TGG | + | chr7_3:67104787-67104806 | None:intergenic | 35.0% | |
| GATCTTAAAGATGAACGCAA+GGG | + | chr7_3:67104840-67104859 | None:intergenic | 35.0% | |
| AGATCTTAAAGATGAACGCA+AGG | + | chr7_3:67104841-67104860 | None:intergenic | 35.0% | |
| ACGGATCCTAAATCTTTAAG+AGG | - | chr7_3:67104894-67104913 | Msa1118440:intron | 35.0% | |
| ATGAAGTTCTCTGTTCCATA+TGG | - | chr7_3:67105266-67105285 | Msa1118440:intron | 35.0% | |
| GTTATGGATATCCAACCATA+TGG | + | chr7_3:67105284-67105303 | None:intergenic | 35.0% | |
| TGGATATCCATAACAAAGTG+TGG | - | chr7_3:67105290-67105309 | Msa1118440:intron | 35.0% | |
| ! | TTCAAGTTCTCTGTTCCATA+TGG | - | chr7_3:67105524-67105543 | Msa1118440:intron | 35.0% |
| TGTTCCATATGGCTATTCAT+AGG | - | chr7_3:67105535-67105554 | Msa1118440:intron | 35.0% | |
| CTTTCCTATGAATAGCCATA+TGG | + | chr7_3:67105542-67105561 | None:intergenic | 35.0% | |
| !! | TCTAAGACTTTGGAGTTGTT+TGG | - | chr7_3:67105660-67105679 | Msa1118440:intron | 35.0% |
| ACTGAAGTGTAAACAGTGTA+TGG | - | chr7_3:67105821-67105840 | Msa1118440:intron | 35.0% | |
| CTGAAGTGTAAACAGTGTAT+GGG | - | chr7_3:67105822-67105841 | Msa1118440:intron | 35.0% | |
| TGAAGTGTAAACAGTGTATG+GGG | - | chr7_3:67105823-67105842 | Msa1118440:intron | 35.0% | |
| ! | AGTAAGATTTGTATCGGTGA+AGG | - | chr7_3:67105931-67105950 | Msa1118440:intron | 35.0% |
| ! | GTAAGATTTGTATCGGTGAA+GGG | - | chr7_3:67105932-67105951 | Msa1118440:intron | 35.0% |
| !! | AGCAGCATTCTAAAATTCAG+AGG | + | chr7_3:67106294-67106313 | None:intergenic | 35.0% |
| ! | TTTAGAATGCTGCTCTGTAT+TGG | - | chr7_3:67106300-67106319 | Msa1118440:intron | 35.0% |
| TTAGAATGCTGCTCTGTATT+GGG | - | chr7_3:67106301-67106320 | Msa1118440:intron | 35.0% | |
| GTAACAATAACTAGCACAAC+AGG | + | chr7_3:67106383-67106402 | None:intergenic | 35.0% | |
| GAAAACCTGAGTTTATGTGA+TGG | - | chr7_3:67106426-67106445 | Msa1118440:intron | 35.0% | |
| AAACCTGAGTTTATGTGATG+GGG | - | chr7_3:67106428-67106447 | Msa1118440:intron | 35.0% | |
| CTTCCTTGAATACCATCAAA+AGG | - | chr7_3:67106735-67106754 | Msa1118440:intron | 35.0% | |
| !! | AGTCCTTTTGATGGTATTCA+AGG | + | chr7_3:67106741-67106760 | None:intergenic | 35.0% |
| TATTCCCCCATATATTGATG+TGG | - | chr7_3:67106787-67106806 | Msa1118440:CDS | 35.0% | |
| TGATGTGGATTTAAGTGAGT+TGG | - | chr7_3:67106802-67106821 | Msa1118440:CDS | 35.0% | |
| ! | GATTTAAGTGAGTTGGATGT+GGG | - | chr7_3:67106809-67106828 | Msa1118440:CDS | 35.0% |
| TACCGACCTTGTATGTTTAT+CGG | - | chr7_3:67107191-67107210 | Msa1118440:CDS | 35.0% | |
| ATCCGATAAACATACAAGGT+CGG | + | chr7_3:67107196-67107215 | None:intergenic | 35.0% | |
| !!! | GTTTTGGGTTTTGGGTTTTG+CGG | + | chr7_3:67102519-67102538 | None:intergenic | 40.0% |
| !!! | GAGAAAGGGTTTTGGGTTTT+GGG | + | chr7_3:67102527-67102546 | None:intergenic | 40.0% |
| !!! | AGAGAAAGGGTTTTGGGTTT+TGG | + | chr7_3:67102528-67102547 | None:intergenic | 40.0% |
| ! | TGGTGAAGAGAAAGGGTTTT+GGG | + | chr7_3:67102534-67102553 | None:intergenic | 40.0% |
| TGCATTGTGGTGAAGAGAAA+GGG | + | chr7_3:67102541-67102560 | None:intergenic | 40.0% | |
| ATGCATTGTGGTGAAGAGAA+AGG | + | chr7_3:67102542-67102561 | None:intergenic | 40.0% | |
| !! | TCGTACTTTGGGTTAGGTTT+TGG | + | chr7_3:67102688-67102707 | None:intergenic | 40.0% |
| ! | ATTTTTGCCGGAATCTTTGC+GGG | + | chr7_3:67102731-67102750 | None:intergenic | 40.0% |
| AACGAGTTTCCTGATCTGAT+CGG | + | chr7_3:67102854-67102873 | None:intergenic | 40.0% | |
| AGGAAACTCGTTAACCATCT+CGG | - | chr7_3:67102862-67102881 | Msa1118440:CDS | 40.0% | |
| GAAGAACTTGAAGATGGAAG+AGG | + | chr7_3:67102909-67102928 | None:intergenic | 40.0% | |
| CGATGATGTCTTCGTCATTA+GGG | + | chr7_3:67102954-67102973 | None:intergenic | 40.0% | |
| TCGATGATGTCTTCGTCATT+AGG | + | chr7_3:67102955-67102974 | None:intergenic | 40.0% | |
| ACTTTCAACCAAGCATCTGA+CGG | + | chr7_3:67103141-67103160 | None:intergenic | 40.0% | |
| GACGTTCCTATTGTATTCAG+AGG | - | chr7_3:67103162-67103181 | Msa1118440:intron | 40.0% | |
| AGAGGAGATGATATATCTCC+TGG | - | chr7_3:67103180-67103199 | Msa1118440:intron | 40.0% | |
| ATATCTCCTGGACTCAAGAA+AGG | - | chr7_3:67103192-67103211 | Msa1118440:intron | 40.0% | |
| ATCTAACCTTTCTTGAGTCC+AGG | + | chr7_3:67103201-67103220 | None:intergenic | 40.0% | |
| TTGTCACAATAGTGAACGGA+AGG | + | chr7_3:67103449-67103468 | None:intergenic | 40.0% | |
| AGCAGTTAATCATAGCAGCT+TGG | - | chr7_3:67103474-67103493 | Msa1118440:intron | 40.0% | |
| GCAGTTAATCATAGCAGCTT+GGG | - | chr7_3:67103475-67103494 | Msa1118440:intron | 40.0% | |
| ! | TAAAGTCCAGCTTTCAAGTC+TGG | - | chr7_3:67103550-67103569 | Msa1118440:intron | 40.0% |
| CCTCCTATTTGTTTGCCAAA+GGG | + | chr7_3:67103747-67103766 | None:intergenic | 40.0% | |
| CCTTTGGCAAACAAATAGGA+GGG | - | chr7_3:67103745-67103764 | Msa1118440:intron | 40.0% | |
| ! | GATGTATCATTTTGCGATGG+TGG | - | chr7_3:67103977-67103996 | Msa1118440:intron | 40.0% |
| CAAGTTCTATTGCACATCGT+TGG | + | chr7_3:67104100-67104119 | None:intergenic | 40.0% | |
| CAACGATGTGCAATAGAACT+TGG | - | chr7_3:67104098-67104117 | Msa1118440:intron | 40.0% | |
| !! | CCCGTTTTGGCAAACAAATT+AGG | + | chr7_3:67104145-67104164 | None:intergenic | 40.0% |
| ATATATATAGGGAGCGACTC+AGG | + | chr7_3:67104311-67104330 | None:intergenic | 40.0% | |
| TATATATTAAAGGGCAGCCC+GGG | - | chr7_3:67104324-67104343 | Msa1118440:intron | 40.0% | |
| GCATACAATACACCAAATGG+TGG | + | chr7_3:67104358-67104377 | None:intergenic | 40.0% | |
| !! | TTGGTAGTGATTACGTTTCC+AGG | - | chr7_3:67104513-67104532 | Msa1118440:intron | 40.0% |
| ! | AAAGGGTATAACCTTTGTCC+AGG | + | chr7_3:67104745-67104764 | None:intergenic | 40.0% |
| AATTTCTGTGCGGTCAATTC+TGG | - | chr7_3:67105052-67105071 | Msa1118440:intron | 40.0% | |
| ATTTCTGTGCGGTCAATTCT+GGG | - | chr7_3:67105053-67105072 | Msa1118440:intron | 40.0% | |
| ! | GGGAGTGTAGAAATTGAGAT+CGG | - | chr7_3:67105073-67105092 | Msa1118440:intron | 40.0% |
| AGAAATTGAGATCGGTGAAG+AGG | - | chr7_3:67105081-67105100 | Msa1118440:intron | 40.0% | |
| !! | TGGATGAGATTTGGTGTCAA+TGG | - | chr7_3:67105185-67105204 | Msa1118440:intron | 40.0% |
| AGTTCTCTGTTCCATATGGT+TGG | - | chr7_3:67105270-67105289 | Msa1118440:intron | 40.0% | |
| CACTGTACCACACTTTGTTA+TGG | + | chr7_3:67105300-67105319 | None:intergenic | 40.0% | |
| !! | TGCTTACAGGGTTTTATGCT+AGG | - | chr7_3:67105464-67105483 | Msa1118440:intron | 40.0% |
| !! | TTACAGGGTTTTATGCTAGG+TGG | - | chr7_3:67105467-67105486 | Msa1118440:intron | 40.0% |
| TAAAACGCAAAAGGACCGTT+CGG | + | chr7_3:67106040-67106059 | None:intergenic | 40.0% | |
| TTTGATGCCTTGTAACCTAG+CGG | + | chr7_3:67106193-67106212 | None:intergenic | 40.0% | |
| ! | AGTTTATGTGATGGGGTAGA+CGG | - | chr7_3:67106435-67106454 | Msa1118440:intron | 40.0% |
| TCACTTTGCACCATCAACAT+AGG | + | chr7_3:67106527-67106546 | None:intergenic | 40.0% | |
| ! | CTCATCACCACAATTTTTGC+AGG | - | chr7_3:67106710-67106729 | Msa1118440:intron | 40.0% |
| ! | GGATTTAAGTGAGTTGGATG+TGG | - | chr7_3:67106808-67106827 | Msa1118440:CDS | 40.0% |
| !! | GGGTGAAGAAGTTTTAATGC+AGG | + | chr7_3:67106869-67106888 | None:intergenic | 40.0% |
| GTTGTGTTTCAGAAACCCTT+TGG | + | chr7_3:67106922-67106941 | None:intergenic | 40.0% | |
| ! | TGTAGAGCTTTGTGTAACTC+AGG | + | chr7_3:67107148-67107167 | None:intergenic | 40.0% |
| TGAGGATAGTTGAGAGGAGA+GGG | + | chr7_3:67102493-67102512 | None:intergenic | 45.0% | |
| !!! | TTTTGGGTTTTGCGGTAGTG+AGG | + | chr7_3:67102511-67102530 | None:intergenic | 45.0% |
| ! | GTGGTGAAGAGAAAGGGTTT+TGG | + | chr7_3:67102535-67102554 | None:intergenic | 45.0% |
| AGGTTAGGGGTTGTAGTATG+TGG | + | chr7_3:67102651-67102670 | None:intergenic | 45.0% | |
| ! | GTTTCGTCGTACTTTGGGTT+AGG | + | chr7_3:67102694-67102713 | None:intergenic | 45.0% |
| GGATGGTTTCGTCGTACTTT+GGG | + | chr7_3:67102699-67102718 | None:intergenic | 45.0% | |
| AGGATGGTTTCGTCGTACTT+TGG | + | chr7_3:67102700-67102719 | None:intergenic | 45.0% | |
| ! | TTTTTGCCGGAATCTTTGCG+GGG | + | chr7_3:67102730-67102749 | None:intergenic | 45.0% |
| !! | CTTGGCGGAGATATTTTTGC+CGG | + | chr7_3:67102743-67102762 | None:intergenic | 45.0% |
| ATCGTCTTCGAACAGGAAGA+CGG | - | chr7_3:67102790-67102809 | Msa1118440:three_prime_UTR | 45.0% | |
| ACTCAAATGCATACACTGCG+AGG | + | chr7_3:67102994-67103013 | None:intergenic | 45.0% | |
| GTTAATCATAGCAGCTTGGG+CGG | - | chr7_3:67103478-67103497 | Msa1118440:intron | 45.0% | |
| CCCTTTGGCAAACAAATAGG+AGG | - | chr7_3:67103744-67103763 | Msa1118440:intron | 45.0% | |
| CCCTCCTATTTGTTTGCCAA+AGG | + | chr7_3:67103748-67103767 | None:intergenic | 45.0% | |
| GTTCTATTGCACATCGTTGG+TGG | + | chr7_3:67104097-67104116 | None:intergenic | 45.0% | |
| !! | CCGTTTGGATTTGGTGTCAA+CGG | + | chr7_3:67104399-67104418 | None:intergenic | 45.0% |
| CCGTTGACACCAAATCCAAA+CGG | - | chr7_3:67104396-67104415 | Msa1118440:intron | 45.0% | |
| TACAACACGTGAGTACAGAG+GGG | + | chr7_3:67104477-67104496 | None:intergenic | 45.0% | |
| CTACAACACGTGAGTACAGA+GGG | + | chr7_3:67104478-67104497 | None:intergenic | 45.0% | |
| ! | ATTTCATCGGCTGCAGAAGA+GGG | + | chr7_3:67104546-67104565 | None:intergenic | 45.0% |
| ! | AATTTCATCGGCTGCAGAAG+AGG | + | chr7_3:67104547-67104566 | None:intergenic | 45.0% |
| AGAGGAATGTTCCTGGACAA+AGG | - | chr7_3:67104731-67104750 | Msa1118440:intron | 45.0% | |
| !! | AGATCGGTGAAGAGGTACTA+AGG | - | chr7_3:67105089-67105108 | Msa1118440:intron | 45.0% |
| ATGCTAGGTGGTATGTGCAA+TGG | - | chr7_3:67105232-67105251 | Msa1118440:intron | 45.0% | |
| TGCTAGGTGGTATGTGCAAT+GGG | - | chr7_3:67105480-67105499 | Msa1118440:intron | 45.0% | |
| TGGCTATTCATAGGAAAGCG+TGG | - | chr7_3:67105544-67105563 | Msa1118440:intron | 45.0% | |
| CCTCAATAAGCTCTTCCGAA+CGG | - | chr7_3:67106022-67106041 | Msa1118440:intron | 45.0% | |
| AATACTCCAGTCACCACTGT+GGG | - | chr7_3:67106096-67106115 | Msa1118440:intron | 45.0% | |
| ATAACCTTACCATGAGCGTC+AGG | - | chr7_3:67106141-67106160 | Msa1118440:intron | 45.0% | |
| TAGAAACAACCTGACGCTCA+TGG | + | chr7_3:67106153-67106172 | None:intergenic | 45.0% | |
| TGCTCTGTATTGGGATGACA+AGG | - | chr7_3:67106310-67106329 | Msa1118440:intron | 45.0% | |
| CTACCCCATCACATAAACTC+AGG | + | chr7_3:67106434-67106453 | None:intergenic | 45.0% | |
| !! | TGTTGATGGTGCAAAGTGAC+TGG | - | chr7_3:67106528-67106547 | Msa1118440:intron | 45.0% |
| ! | GCAAAGTGACTGGCCATTAT+TGG | - | chr7_3:67106538-67106557 | Msa1118440:intron | 45.0% |
| GTCCATATCAGTTAGAGCAG+GGG | + | chr7_3:67106587-67106606 | None:intergenic | 45.0% | |
| CGTCCATATCAGTTAGAGCA+GGG | + | chr7_3:67106588-67106607 | None:intergenic | 45.0% | |
| TCTAACTGATATGGACGCCT+TGG | - | chr7_3:67106591-67106610 | Msa1118440:CDS | 45.0% | |
| !! | GGAAGCACCTGCAAAAATTG+TGG | + | chr7_3:67106720-67106739 | None:intergenic | 45.0% |
| ATGGGGGAATAATGTCTGCA+GGG | + | chr7_3:67106778-67106797 | None:intergenic | 45.0% | |
| TATGGGGGAATAATGTCTGC+AGG | + | chr7_3:67106779-67106798 | None:intergenic | 45.0% | |
| GTGAGGATAGTTGAGAGGAG+AGG | + | chr7_3:67102494-67102513 | None:intergenic | 50.0% | |
| CGGTAGTGAGGATAGTTGAG+AGG | + | chr7_3:67102499-67102518 | None:intergenic | 50.0% | |
| ! | GATTAAGGCGTTTGCGATGG+CGG | + | chr7_3:67102611-67102630 | None:intergenic | 50.0% |
| ! | GTGGATTAAGGCGTTTGCGA+TGG | + | chr7_3:67102614-67102633 | None:intergenic | 50.0% |
| !! | TGGCTCTGGAGTGTGGATTA+AGG | + | chr7_3:67102626-67102645 | None:intergenic | 50.0% |
| ! | TGTAGTATGTGGTCTGGCTC+TGG | + | chr7_3:67102640-67102659 | None:intergenic | 50.0% |
| AGGGGTTGTAGTATGTGGTC+TGG | + | chr7_3:67102646-67102665 | None:intergenic | 50.0% | |
| AAAGCCGTCGAGGTAGGTTA+GGG | + | chr7_3:67102665-67102684 | None:intergenic | 50.0% | |
| !! | TTTTGGAAAGCCGTCGAGGT+AGG | + | chr7_3:67102671-67102690 | None:intergenic | 50.0% |
| !!! | TAGGTTTTGGAAAGCCGTCG+AGG | + | chr7_3:67102675-67102694 | None:intergenic | 50.0% |
| CGGCAAAAATATCTCCGCCA+AGG | - | chr7_3:67102741-67102760 | Msa1118440:three_prime_UTR | 50.0% | |
| TCCTGTTCGAAGACGATGCT+CGG | + | chr7_3:67102787-67102806 | None:intergenic | 50.0% | |
| GATCGGAACGAACGGAAATG+AGG | + | chr7_3:67102837-67102856 | None:intergenic | 50.0% | |
| CCTGATCTGATCGGAACGAA+CGG | + | chr7_3:67102845-67102864 | None:intergenic | 50.0% | |
| CGGAAGGAAAGACCAAAAGC+AGG | + | chr7_3:67103433-67103452 | None:intergenic | 50.0% | |
| ! | TCCAGCTTTCAAGTCTGGCA+GGG | - | chr7_3:67103555-67103574 | Msa1118440:intron | 50.0% |
| ACAACACGTGAGTACAGAGG+GGG | + | chr7_3:67104476-67104495 | None:intergenic | 50.0% | |
| CCTACAACACGTGAGTACAG+AGG | + | chr7_3:67104479-67104498 | None:intergenic | 50.0% | |
| CCTCTGTACTCACGTGTTGT+AGG | - | chr7_3:67104476-67104495 | Msa1118440:intron | 50.0% | |
| !! | GGACAAAGGCATTTACGTCG+TGG | - | chr7_3:67104702-67104721 | Msa1118440:intron | 50.0% |
| TTTACGTCGTGGTTGTGCAG+AGG | - | chr7_3:67104713-67104732 | Msa1118440:intron | 50.0% | |
| GTTGTGCAGAGGAATGTTCC+TGG | - | chr7_3:67104724-67104743 | Msa1118440:intron | 50.0% | |
| TGCTAGGTGGTATGTGCAAC+AGG | - | chr7_3:67105233-67105252 | Msa1118440:intron | 50.0% | |
| CCGTTCGGAAGAGCTTATTG+AGG | + | chr7_3:67106025-67106044 | None:intergenic | 50.0% | |
| GAATACTCCAGTCACCACTG+TGG | - | chr7_3:67106095-67106114 | Msa1118440:intron | 50.0% | |
| ATACTCCAGTCACCACTGTG+GGG | - | chr7_3:67106097-67106116 | Msa1118440:intron | 50.0% | |
| ACTCTCACTAAACCCCACAG+TGG | + | chr7_3:67106112-67106131 | None:intergenic | 50.0% | |
| ACAACCTGACGCTCATGGTA+AGG | + | chr7_3:67106148-67106167 | None:intergenic | 50.0% | |
| GACCCCTGCTCTAACTGATA+TGG | - | chr7_3:67106582-67106601 | Msa1118440:CDS | 50.0% | |
| GCGTCCATATCAGTTAGAGC+AGG | + | chr7_3:67106589-67106608 | None:intergenic | 50.0% | |
| CTGATATGGACGCCTTGGTA+TGG | - | chr7_3:67106596-67106615 | Msa1118440:CDS | 50.0% | |
| CAACCCCTAACCTACCTCGA+CGG | - | chr7_3:67102658-67102677 | Msa1118440:three_prime_UTR | 55.0% | |
| AAGCCGTCGAGGTAGGTTAG+GGG | + | chr7_3:67102664-67102683 | None:intergenic | 55.0% | |
| GAAAGCCGTCGAGGTAGGTT+AGG | + | chr7_3:67102666-67102685 | None:intergenic | 55.0% | |
| AATCTTTGCGGGGAATGGCG+AGG | + | chr7_3:67102720-67102739 | None:intergenic | 55.0% | |
| GCCATTCCCCGCAAAGATTC+CGG | - | chr7_3:67102721-67102740 | Msa1118440:three_prime_UTR | 55.0% | |
| ! | TCCGCCAAGGAGCGTAAAGT+TGG | - | chr7_3:67102754-67102773 | Msa1118440:three_prime_UTR | 55.0% |
| GCCAACTTTACGCTCCTTGG+CGG | + | chr7_3:67102758-67102777 | None:intergenic | 55.0% | |
| ! | TCCGAGCATCGTCTTCGAAC+AGG | - | chr7_3:67102783-67102802 | Msa1118440:three_prime_UTR | 55.0% |
| GAACAGGAAGACGGTCAGCA+CGG | - | chr7_3:67102799-67102818 | Msa1118440:exon | 55.0% | |
| CCGTTCGTTCCGATCAGATC+AGG | - | chr7_3:67102842-67102861 | Msa1118440:CDS | 55.0% | |
| GGCGTGAGAGGAAGAAGGAA+CGG | + | chr7_3:67102888-67102907 | None:intergenic | 55.0% | |
| ! | GAAGAGGCGTGAGAGGAAGA+AGG | + | chr7_3:67102893-67102912 | None:intergenic | 55.0% |
| ! | GAAGATGGAAGAGGCGTGAG+AGG | + | chr7_3:67102900-67102919 | None:intergenic | 55.0% |
| TAAGGGCTCCGTCAGATGCT+TGG | - | chr7_3:67103130-67103149 | Msa1118440:intron | 55.0% | |
| ATCATAGCAGCTTGGGCGGT+TGG | - | chr7_3:67103482-67103501 | Msa1118440:intron | 55.0% | |
| GGGCGGTTGGATAGCTCAAT+TGG | - | chr7_3:67103495-67103514 | Msa1118440:intron | 55.0% | |
| ! | GTCCAGCTTTCAAGTCTGGC+AGG | - | chr7_3:67103554-67103573 | Msa1118440:intron | 55.0% |
| TCCCTGCCAGACTTGAAAGC+TGG | + | chr7_3:67103559-67103578 | None:intergenic | 55.0% | |
| TATTAAAGGGCAGCCCGGGA+AGG | - | chr7_3:67104328-67104347 | Msa1118440:intron | 55.0% | |
| ATTAAAGGGCAGCCCGGGAA+GGG | - | chr7_3:67104329-67104348 | Msa1118440:intron | 55.0% | |
| GCAGAAGAGGGAGGTAAACC+TGG | + | chr7_3:67104534-67104553 | None:intergenic | 55.0% | |
| CTAAACCCCACAGTGGTGAC+TGG | + | chr7_3:67106105-67106124 | None:intergenic | 55.0% | |
| GCTGAAAAGCCATGACCGCT+AGG | - | chr7_3:67106175-67106194 | Msa1118440:intron | 55.0% | |
| GCCATGACCGCTAGGTTACA+AGG | - | chr7_3:67106183-67106202 | Msa1118440:intron | 55.0% | |
| GCCTTGTAACCTAGCGGTCA+TGG | + | chr7_3:67106187-67106206 | None:intergenic | 55.0% | |
| ! | TGAGTTGGATGTGGGCCAGA+AGG | - | chr7_3:67106817-67106836 | Msa1118440:CDS | 55.0% |
| GATCACCCATGAGCACCTTC+TGG | + | chr7_3:67106835-67106854 | None:intergenic | 55.0% | |
| TGTGCGGGGGAGATGCATTG+TGG | + | chr7_3:67102554-67102573 | None:intergenic | 60.0% | |
| !! | TTGCGATGGCGGAGAAGTGG+CGG | + | chr7_3:67102600-67102619 | None:intergenic | 60.0% |
| !! | CGTTTGCGATGGCGGAGAAG+TGG | + | chr7_3:67102603-67102622 | None:intergenic | 60.0% |
| !! | TGTGGTCTGGCTCTGGAGTG+TGG | + | chr7_3:67102633-67102652 | None:intergenic | 60.0% |
| TTTGCGGGGAATGGCGAGGA+TGG | + | chr7_3:67102716-67102735 | None:intergenic | 60.0% | |
| GCCGGAATCTTTGCGGGGAA+TGG | + | chr7_3:67102725-67102744 | None:intergenic | 60.0% | |
| GCGGCCAACTTTACGCTCCT+TGG | + | chr7_3:67102761-67102780 | None:intergenic | 60.0% | |
| CGAAGACGATGCTCGGAACG+CGG | + | chr7_3:67102780-67102799 | None:intergenic | 60.0% | |
| GGAAGAAGGAACGGCCGAGA+TGG | + | chr7_3:67102879-67102898 | None:intergenic | 60.0% | |
| TTAAAGGGCAGCCCGGGAAG+GGG | - | chr7_3:67104330-67104349 | Msa1118440:intron | 60.0% | |
| ! | AAATGGTGGGACCCCTTCCC+GGG | + | chr7_3:67104344-67104363 | None:intergenic | 60.0% |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr7_3:67104345-67104364 | None:intergenic | 60.0% |
| ! | TCATCGGCTGCAGAAGAGGG+AGG | + | chr7_3:67104543-67104562 | None:intergenic | 60.0% |
| !! | TGTGGGCCAGAAGGTGCTCA+TGG | - | chr7_3:67106826-67106845 | Msa1118440:CDS | 60.0% |
| !! | GTGGGCCAGAAGGTGCTCAT+GGG | - | chr7_3:67106827-67106846 | Msa1118440:CDS | 60.0% |
| AAGTGGCGGCGGTGGAGGAA+GGG | + | chr7_3:67102586-67102605 | None:intergenic | 65.0% | |
| CAGGAAGACGGTCAGCACGG+TGG | - | chr7_3:67102802-67102821 | Msa1118440:exon | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr7_3:67104343-67104362 | Msa1118440:intron | 65.0% | |
| ! | AAGGGGCGGAGGAGTGTGCG+GGG | + | chr7_3:67102568-67102587 | None:intergenic | 70.0% |
| ! | GAAGGGGCGGAGGAGTGTGC+GGG | + | chr7_3:67102569-67102588 | None:intergenic | 70.0% |
| ! | GGAAGGGGCGGAGGAGTGTG+CGG | + | chr7_3:67102570-67102589 | None:intergenic | 70.0% |
| AGTGGCGGCGGTGGAGGAAG+GGG | + | chr7_3:67102585-67102604 | None:intergenic | 70.0% | |
| GAAGTGGCGGCGGTGGAGGA+AGG | + | chr7_3:67102587-67102606 | None:intergenic | 70.0% | |
| !! | CGATGGCGGAGAAGTGGCGG+CGG | + | chr7_3:67102597-67102616 | None:intergenic | 70.0% |
| ! | AGGGGCGGAGGAGTGTGCGG+GGG | + | chr7_3:67102567-67102586 | None:intergenic | 75.0% |
| CGGAGAAGTGGCGGCGGTGG+AGG | + | chr7_3:67102591-67102610 | None:intergenic | 75.0% | |
| TGGCGGAGAAGTGGCGGCGG+TGG | + | chr7_3:67102594-67102613 | None:intergenic | 75.0% | |
| ! | GGCGGTGGAGGAAGGGGCGG+AGG | + | chr7_3:67102579-67102598 | None:intergenic | 80.0% |
| ! | GGCGGCGGTGGAGGAAGGGG+CGG | + | chr7_3:67102582-67102601 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 67102448 | 67107323 | 67102448 | ID=Msa1118440;Name=Msa1118440 |
| chr7_3 | mRNA | 67102448 | 67107323 | 67102448 | ID=Msa1118440-mRNA-1;Parent=Msa1118440;Name=Msa1118440-mRNA-1;_AED=0.05;_eAED=0.05;_QI=108|1|1|1|1|1|3|365|266 |
| chr7_3 | exon | 67102448 | 67103039 | 67102448 | ID=Msa1118440-mRNA-1:exon:16422;Parent=Msa1118440-mRNA-1 |
| chr7_3 | exon | 67106558 | 67106687 | 67106558 | ID=Msa1118440-mRNA-1:exon:16421;Parent=Msa1118440-mRNA-1 |
| chr7_3 | exon | 67106772 | 67107323 | 67106772 | ID=Msa1118440-mRNA-1:exon:16420;Parent=Msa1118440-mRNA-1 |
| chr7_3 | five_prime_UTR | 67107216 | 67107323 | 67107216 | ID=Msa1118440-mRNA-1:five_prime_utr;Parent=Msa1118440-mRNA-1 |
| chr7_3 | CDS | 67106772 | 67107215 | 67106772 | ID=Msa1118440-mRNA-1:cds;Parent=Msa1118440-mRNA-1 |
| chr7_3 | CDS | 67106558 | 67106687 | 67106558 | ID=Msa1118440-mRNA-1:cds;Parent=Msa1118440-mRNA-1 |
| chr7_3 | CDS | 67102813 | 67103039 | 67102813 | ID=Msa1118440-mRNA-1:cds;Parent=Msa1118440-mRNA-1 |
| chr7_3 | three_prime_UTR | 67102448 | 67102812 | 67102448 | ID=Msa1118440-mRNA-1:three_prime_utr;Parent=Msa1118440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
