Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071040 | XP_003624695.1 | 98.872 | 266 | 3 | 0 | 1 | 266 | 1 | 266 | 0.0 | 532 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071040 | sp|Q2G6G9|RL25_NOVAD | 29.480 | 173 | 100 | 3 | 56 | 228 | 9 | 159 | 3.61e-19 | 86.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071040 | Q2HVB5 | 98.872 | 266 | 3 | 0 | 1 | 266 | 1 | 266 | 0.0 | 532 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0088610 | Msa1071040 | 0.818132 | 2.299247e-52 | -8.615850e-47 |
| Msa0621210 | Msa1071040 | 0.808410 | 3.139733e-50 | -8.615850e-47 |
| Msa0743920 | Msa1071040 | 0.805904 | 1.065731e-49 | -8.615850e-47 |
| Msa0748180 | Msa1071040 | 0.807880 | 4.072200e-50 | -8.615850e-47 |
| Msa0139110 | Msa1071040 | 0.802967 | 4.363639e-49 | -8.615850e-47 |
| Msa1071040 | Msa1118440 | 0.993458 | 7.060628e-200 | -8.615850e-47 |
| Msa1071040 | Msa1159030 | 0.979431 | 5.947909e-148 | -8.615850e-47 |
| Msa1071040 | Msa1163980 | 0.803093 | 4.109690e-49 | -8.615850e-47 |
| Msa1071040 | Msa1279780 | 0.811643 | 6.316990e-51 | -8.615850e-47 |
| Msa1071040 | Msa1321200 | 0.832482 | 9.219668e-56 | -8.615850e-47 |
| Msa1071040 | Msa1340560 | 0.975752 | 1.564412e-140 | -8.615850e-47 |
| Msa1071040 | Msa1428870 | 0.823922 | 1.067198e-53 | -8.615850e-47 |
| Msa0291960 | Msa1071040 | 0.844965 | 5.453008e-59 | -8.615850e-47 |
| Msa0329930 | Msa1071040 | 0.861144 | 1.261335e-63 | -8.615850e-47 |
| Msa0333220 | Msa1071040 | 0.855773 | 5.036450e-62 | -8.615850e-47 |
| Msa0864230 | Msa1071040 | 0.806783 | 6.956150e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071040 | MtrunA17_Chr7g0253991 | 98.872 | 266 | 3 | 0 | 1 | 266 | 1 | 266 | 0.0 | 532 |
| Msa1071040 | MtrunA17_Chr8g0374611 | 37.981 | 208 | 116 | 3 | 53 | 253 | 32 | 233 | 7.56e-43 | 146 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071040 | AT4G23620.1 | 66.794 | 262 | 77 | 3 | 5 | 265 | 7 | 259 | 2.72e-121 | 347 |
| Msa1071040 | AT4G23620.2 | 63.636 | 275 | 77 | 4 | 5 | 265 | 7 | 272 | 1.09e-117 | 338 |
| Msa1071040 | AT5G66860.1 | 40.476 | 210 | 112 | 4 | 52 | 254 | 34 | 237 | 1.68e-44 | 151 |
Find 104 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGCTGTTTGTAAAATTA+TGG | 0.157665 | 7_2:-67436755 | Msa1071040:CDS |
| CTTTGAATGTGACATTTATA+AGG | 0.212828 | 7_2:-67440540 | Msa1071040:CDS |
| CTTAAATCCACATCAATATA+TGG | 0.221639 | 7_2:+67436856 | None:intergenic |
| TTACAAACAGCTTCATCTTT+TGG | 0.245961 | 7_2:+67436763 | None:intergenic |
| GTAACTACTTATTGTATCTT+TGG | 0.251706 | 7_2:-67436695 | Msa1071040:exon |
| TCGATGATGTCTTCGTCATT+AGG | 0.273733 | 7_2:+67440700 | None:intergenic |
| CCATCTTATTAGTTGATTCT+TGG | 0.275557 | 7_2:-67436619 | Msa1071040:three_prime_UTR |
| TCGTACTTTGGGTTAGGTTT+TGG | 0.283728 | 7_2:+67440967 | None:intergenic |
| CGATGATGTCTTCGTCATTA+GGG | 0.292294 | 7_2:+67440701 | None:intergenic |
| TACCGACCTTGTATGTTTAT+CGG | 0.318046 | 7_2:-67436459 | Msa1071040:three_prime_UTR |
| GGATGGTTTCGTCGTACTTT+GGG | 0.321382 | 7_2:+67440956 | None:intergenic |
| GCCATTCCCCGCAAAGATTC+CGG | 0.324964 | 7_2:-67440931 | Msa1071040:CDS |
| GGTTTGAATCTGAATCAAAT+TGG | 0.344633 | 7_2:+67440722 | None:intergenic |
| AGTGGCGGCGGTGGAGGAAG+GGG | 0.363667 | 7_2:+67441070 | None:intergenic |
| GAAAGCCGTCGAGGTAGGTT+AGG | 0.367957 | 7_2:+67440989 | None:intergenic |
| TTTGAATGTGACATTTATAA+GGG | 0.368199 | 7_2:-67440539 | Msa1071040:CDS |
| ACTTGCTCAATATAAATGTT+TGG | 0.372718 | 7_2:+67436380 | None:intergenic |
| TGGCTCTGGAGTGTGGATTA+AGG | 0.373199 | 7_2:+67441029 | None:intergenic |
| GGAAGGGGCGGAGGAGTGTG+CGG | 0.375525 | 7_2:+67441085 | None:intergenic |
| GGCGGTGGAGGAAGGGGCGG+AGG | 0.376055 | 7_2:+67441076 | None:intergenic |
| TGGCGGAGAAGTGGCGGCGG+TGG | 0.378382 | 7_2:+67441061 | None:intergenic |
| CCGTTCGTTCCGATCAGATC+AGG | 0.382550 | 7_2:-67440810 | Msa1071040:CDS |
| CGGAGAAGTGGCGGCGGTGG+AGG | 0.383273 | 7_2:+67441064 | None:intergenic |
| GAAGCTGTTTGTAAAATTAT+GGG | 0.386857 | 7_2:-67436754 | Msa1071040:CDS |
| GTTTCGTCGTACTTTGGGTT+AGG | 0.390733 | 7_2:+67440961 | None:intergenic |
| TGTAGTATGTGGTCTGGCTC+TGG | 0.392426 | 7_2:+67441015 | None:intergenic |
| GATCACCCATGAGCACCTTC+TGG | 0.393208 | 7_2:+67436818 | None:intergenic |
| GCCGGAATCTTTGCGGGGAA+TGG | 0.394527 | 7_2:+67440930 | None:intergenic |
| AGGATGGTTTCGTCGTACTT+TGG | 0.396008 | 7_2:+67440955 | None:intergenic |
| GCGGCCAACTTTACGCTCCT+TGG | 0.414214 | 7_2:+67440894 | None:intergenic |
| GTTGTGTTTCAGAAACCCTT+TGG | 0.419943 | 7_2:+67436731 | None:intergenic |
| GTGGTGAAGAGAAAGGGTTT+TGG | 0.428880 | 7_2:+67441120 | None:intergenic |
| TCATCTCCTCTGAATACAAT+AGG | 0.430682 | 7_2:+67440484 | None:intergenic |
| TTAAATCCACATCAATATAT+GGG | 0.431795 | 7_2:+67436857 | None:intergenic |
| GAAGTGGCGGCGGTGGAGGA+AGG | 0.435729 | 7_2:+67441068 | None:intergenic |
| GAAGGGGCGGAGGAGTGTGC+GGG | 0.438831 | 7_2:+67441086 | None:intergenic |
| AGAGGAGATGATATATCTCC+TGG | 0.439796 | 7_2:-67440472 | Msa1071040:CDS |
| AAGGGGCGGAGGAGTGTGCG+GGG | 0.441342 | 7_2:+67441087 | None:intergenic |
| TCCGAGCATCGTCTTCGAAC+AGG | 0.442178 | 7_2:-67440869 | Msa1071040:CDS |
| TGACAGATTCATTTGAAAGC+TGG | 0.443599 | 7_2:-67440574 | Msa1071040:intron |
| AAAGCCGTCGAGGTAGGTTA+GGG | 0.451004 | 7_2:+67440990 | None:intergenic |
| AGGGGTTGTAGTATGTGGTC+TGG | 0.453043 | 7_2:+67441009 | None:intergenic |
| AGATACAATAAGTAGTTACT+TGG | 0.457131 | 7_2:+67436699 | None:intergenic |
| TGTGGGCCAGAAGGTGCTCA+TGG | 0.458165 | 7_2:-67436824 | Msa1071040:CDS |
| ATCTAACCTTTCTTGAGTCC+AGG | 0.460897 | 7_2:+67440454 | None:intergenic |
| GGCGGCGGTGGAGGAAGGGG+CGG | 0.466194 | 7_2:+67441073 | None:intergenic |
| TGAGGATAGTTGAGAGGAGA+GGG | 0.466577 | 7_2:+67441162 | None:intergenic |
| TGATGTGGATTTAAGTGAGT+TGG | 0.469740 | 7_2:-67436848 | Msa1071040:CDS |
| TGCATTGTGGTGAAGAGAAA+GGG | 0.471889 | 7_2:+67441114 | None:intergenic |
| TAAGGGCTCCGTCAGATGCT+TGG | 0.483656 | 7_2:-67440522 | Msa1071040:CDS |
| TGTAGAGCTTTGTGTAACTC+AGG | 0.486448 | 7_2:+67436505 | None:intergenic |
| AGGGGCGGAGGAGTGTGCGG+GGG | 0.489766 | 7_2:+67441088 | None:intergenic |
| CAGTTATTGTGAACAAAACT+AGG | 0.490000 | 7_2:+67436570 | None:intergenic |
| TCCTGTTCGAAGACGATGCT+CGG | 0.491020 | 7_2:+67440868 | None:intergenic |
| CTTATAAATGTCACATTCAA+AGG | 0.498069 | 7_2:+67440541 | None:intergenic |
| CCAAGAATCAACTAATAAGA+TGG | 0.498429 | 7_2:+67436619 | None:intergenic |
| ACTACTTATTGTATCTTTGG+TGG | 0.503503 | 7_2:-67436692 | Msa1071040:three_prime_UTR |
| TTGTAAAATTATGGGCCAAA+GGG | 0.504390 | 7_2:-67436746 | Msa1071040:CDS |
| CGGTAGTGAGGATAGTTGAG+AGG | 0.505122 | 7_2:+67441156 | None:intergenic |
| GGATTTAAGTGAGTTGGATG+TGG | 0.507332 | 7_2:-67436842 | Msa1071040:CDS |
| GCCAACTTTACGCTCCTTGG+CGG | 0.509358 | 7_2:+67440897 | None:intergenic |
| ATGCATTGTGGTGAAGAGAA+AGG | 0.514185 | 7_2:+67441113 | None:intergenic |
| AAGTGGCGGCGGTGGAGGAA+GGG | 0.515170 | 7_2:+67441069 | None:intergenic |
| ATATCTCCTGGACTCAAGAA+AGG | 0.519847 | 7_2:-67440460 | Msa1071040:intron |
| TTTGTAAAATTATGGGCCAA+AGG | 0.522313 | 7_2:-67436747 | Msa1071040:CDS |
| TCCGCCAAGGAGCGTAAAGT+TGG | 0.526882 | 7_2:-67440898 | Msa1071040:CDS |
| TGTGGTCTGGCTCTGGAGTG+TGG | 0.529733 | 7_2:+67441022 | None:intergenic |
| CTTCCTTGAATACCATCAAA+AGG | 0.531879 | 7_2:-67436915 | Msa1071040:CDS |
| TGCTCTTCAATACTACGCTC+AGG | 0.532561 | 7_2:+67441205 | None:intergenic |
| ATTGGTGAAGAACTTGAAGA+TGG | 0.535306 | 7_2:+67440740 | None:intergenic |
| AGGTTAGGGGTTGTAGTATG+TGG | 0.536070 | 7_2:+67441004 | None:intergenic |
| GAAGATGGAAGAGGCGTGAG+AGG | 0.537822 | 7_2:+67440755 | None:intergenic |
| GATCGGAACGAACGGAAATG+AGG | 0.538932 | 7_2:+67440818 | None:intergenic |
| GTGAGGATAGTTGAGAGGAG+AGG | 0.539122 | 7_2:+67441161 | None:intergenic |
| TTTGCGGGGAATGGCGAGGA+TGG | 0.546947 | 7_2:+67440939 | None:intergenic |
| CGTTTGCGATGGCGGAGAAG+TGG | 0.551652 | 7_2:+67441052 | None:intergenic |
| GAAGAGGCGTGAGAGGAAGA+AGG | 0.552327 | 7_2:+67440762 | None:intergenic |
| GTGGATTAAGGCGTTTGCGA+TGG | 0.554431 | 7_2:+67441041 | None:intergenic |
| GGCGTGAGAGGAAGAAGGAA+CGG | 0.555683 | 7_2:+67440767 | None:intergenic |
| TTGCGATGGCGGAGAAGTGG+CGG | 0.560803 | 7_2:+67441055 | None:intergenic |
| TAAATCCACATCAATATATG+GGG | 0.566905 | 7_2:+67436858 | None:intergenic |
| GAAGAACTTGAAGATGGAAG+AGG | 0.567823 | 7_2:+67440746 | None:intergenic |
| GACGTTCCTATTGTATTCAG+AGG | 0.569099 | 7_2:-67440490 | Msa1071040:CDS |
| GGAAGAAGGAACGGCCGAGA+TGG | 0.569332 | 7_2:+67440776 | None:intergenic |
| GATTAAGGCGTTTGCGATGG+CGG | 0.573246 | 7_2:+67441044 | None:intergenic |
| ATCGTCTTCGAACAGGAAGA+CGG | 0.582891 | 7_2:-67440862 | Msa1071040:CDS |
| AGGAAACTCGTTAACCATCT+CGG | 0.585561 | 7_2:-67440790 | Msa1071040:CDS |
| GTGGGCCAGAAGGTGCTCAT+GGG | 0.586262 | 7_2:-67436823 | Msa1071040:CDS |
| CCTGATCTGATCGGAACGAA+CGG | 0.594704 | 7_2:+67440810 | None:intergenic |
| AACGAGTTTCCTGATCTGAT+CGG | 0.599141 | 7_2:+67440801 | None:intergenic |
| CGATGGCGGAGAAGTGGCGG+CGG | 0.608841 | 7_2:+67441058 | None:intergenic |
| CGAAGACGATGCTCGGAACG+CGG | 0.618391 | 7_2:+67440875 | None:intergenic |
| TGAGTTGGATGTGGGCCAGA+AGG | 0.624190 | 7_2:-67436833 | Msa1071040:CDS |
| GATTTAAGTGAGTTGGATGT+GGG | 0.629473 | 7_2:-67436841 | Msa1071040:CDS |
| ACTTTCAACCAAGCATCTGA+CGG | 0.637239 | 7_2:+67440514 | None:intergenic |
| AATCTTTGCGGGGAATGGCG+AGG | 0.644316 | 7_2:+67440935 | None:intergenic |
| ATCCGATAAACATACAAGGT+CGG | 0.652992 | 7_2:+67436457 | None:intergenic |
| ACATATCCGATAAACATACA+AGG | 0.655811 | 7_2:+67436453 | None:intergenic |
| AAGCCGTCGAGGTAGGTTAG+GGG | 0.664900 | 7_2:+67440991 | None:intergenic |
| GAACAGGAAGACGGTCAGCA+CGG | 0.669527 | 7_2:-67440853 | Msa1071040:CDS |
| CAACCCCTAACCTACCTCGA+CGG | 0.677651 | 7_2:-67440994 | Msa1071040:CDS |
| AAATCCACATCAATATATGG+GGG | 0.690982 | 7_2:+67436859 | None:intergenic |
| ACTCAAATGCATACACTGCG+AGG | 0.694977 | 7_2:+67440661 | None:intergenic |
| CAGGAAGACGGTCAGCACGG+TGG | 0.739041 | 7_2:-67440850 | Msa1071040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTTATTTTATTGCA+TGG | + | chr7_2:67437524-67437543 | None:intergenic | 10.0% |
| !!! | ATCAATTAATTGTAATTTTA+TGG | - | chr7_2:67437755-67437774 | Msa1071040:intron | 10.0% |
| !!! | AGATTTTTTATAATGAAAAT+AGG | + | chr7_2:67438113-67438132 | None:intergenic | 10.0% |
| !! | ATCATCATTATAAAAAATAT+CGG | + | chr7_2:67439232-67439251 | None:intergenic | 10.0% |
| !! | AAATGCAAATTGATATTAAA+GGG | + | chr7_2:67438522-67438541 | None:intergenic | 15.0% |
| !! | AAAATGCAAATTGATATTAA+AGG | + | chr7_2:67438523-67438542 | None:intergenic | 15.0% |
| !! | ATTTGAAAACATAAAATTGA+TGG | - | chr7_2:67438772-67438791 | Msa1071040:intron | 15.0% |
| !! | AATATATAAAACCAATTTCA+TGG | - | chr7_2:67438869-67438888 | Msa1071040:intron | 15.0% |
| !! | AATTCAGTTACTAATTTAAT+GGG | + | chr7_2:67438939-67438958 | None:intergenic | 15.0% |
| !! | AAATTCAGTTACTAATTTAA+TGG | + | chr7_2:67438940-67438959 | None:intergenic | 15.0% |
| !! | AATATTCACTTAAAATTGAA+TGG | + | chr7_2:67439041-67439060 | None:intergenic | 15.0% |
| !! | TATATATATAGTTAGTACTT+AGG | + | chr7_2:67439116-67439135 | None:intergenic | 15.0% |
| !! | TCATCATTATAAAAAATATC+GGG | + | chr7_2:67439231-67439250 | None:intergenic | 15.0% |
| !! | TTAGTATTTGGTAAATAAAT+AGG | - | chr7_2:67439512-67439531 | Msa1071040:intron | 15.0% |
| !! | ATAATCATTTAATGTTTGAA+TGG | - | chr7_2:67439614-67439633 | Msa1071040:intron | 15.0% |
| !! | AATAATGAAAACATTAATAG+TGG | + | chr7_2:67440165-67440184 | None:intergenic | 15.0% |
| !! | TCTTTGAATAATTGAATTGA+TGG | - | chr7_2:67436941-67436960 | Msa1071040:intron | 20.0% |
| !! | TTTGAATGTGACATTTATAA+GGG | - | chr7_2:67437014-67437033 | Msa1071040:intron | 20.0% |
| !! | AAAAAACAAACACAAATTGT+CGG | + | chr7_2:67437266-67437285 | None:intergenic | 20.0% |
| !! | GATTGAATTATAGTAAACTA+AGG | - | chr7_2:67437557-67437576 | Msa1071040:intron | 20.0% |
| !! | TTATAGTAAACTAAGGTTAA+TGG | - | chr7_2:67437564-67437583 | Msa1071040:intron | 20.0% |
| !!! | TGATTTTTTTTCATTCTCAA+CGG | + | chr7_2:67437739-67437758 | None:intergenic | 20.0% |
| !! | AATGCAAATTGATATTAAAG+GGG | + | chr7_2:67438521-67438540 | None:intergenic | 20.0% |
| !!! | AAAGATTTAGACCAATTTTA+TGG | + | chr7_2:67438825-67438844 | None:intergenic | 20.0% |
| !!! | ATTAAATTGGTTTAATCTAG+AGG | + | chr7_2:67439069-67439088 | None:intergenic | 20.0% |
| !! | TCTAGATTAAACCAATTTAA+TGG | - | chr7_2:67439068-67439087 | Msa1071040:intron | 20.0% |
| !! | ACTAACTATATATATATGCT+AGG | - | chr7_2:67439120-67439139 | Msa1071040:intron | 20.0% |
| !! | TTATAATGATGATTAGCATT+TGG | - | chr7_2:67439239-67439258 | Msa1071040:intron | 20.0% |
| !! | TTATCATGATAGTTAGTATT+TGG | - | chr7_2:67439500-67439519 | Msa1071040:intron | 20.0% |
| !! | TAACATATAGTATGTATTGT+AGG | - | chr7_2:67439805-67439824 | Msa1071040:intron | 20.0% |
| !! | ATACAAAGTAAGATTTGTAT+CGG | - | chr7_2:67439828-67439847 | Msa1071040:intron | 20.0% |
| !!! | TTCAAAAATTGATTTCCTTA+TGG | - | chr7_2:67440372-67440391 | Msa1071040:intron | 20.0% |
| !! | ATATATTAATATCCATACCA+AGG | + | chr7_2:67440514-67440533 | None:intergenic | 20.0% |
| !! | TTAAATCCACATCAATATAT+GGG | + | chr7_2:67440699-67440718 | None:intergenic | 20.0% |
| ! | GATTAAACTCACAAATCAAA+AGG | + | chr7_2:67436923-67436942 | None:intergenic | 25.0% |
| !!! | ATTGAATTGATGGATTGTAT+TGG | - | chr7_2:67436951-67436970 | Msa1071040:intron | 25.0% |
| ! | CTTATAAATGTCACATTCAA+AGG | + | chr7_2:67437015-67437034 | None:intergenic | 25.0% |
| ! | CTTTGAATGTGACATTTATA+AGG | - | chr7_2:67437013-67437032 | Msa1071040:intron | 25.0% |
| ! | ACCAAAAATGTCACAAATTA+GGG | + | chr7_2:67437130-67437149 | None:intergenic | 25.0% |
| !!! | TTTTTGGTGTAATAATGTAC+TGG | - | chr7_2:67437142-67437161 | Msa1071040:intron | 25.0% |
| ! | AATTCAGTAAAGCTCAATTA+CGG | + | chr7_2:67437613-67437632 | None:intergenic | 25.0% |
| ! | TACAAAATCTAATATCCCTT+TGG | - | chr7_2:67437632-67437651 | Msa1071040:intron | 25.0% |
| ! | AGAAGGAAAAATTGTAAACA+TGG | + | chr7_2:67437683-67437702 | None:intergenic | 25.0% |
| ! | AATCTTACAAATGAATCCAT+TGG | + | chr7_2:67437823-67437842 | None:intergenic | 25.0% |
| ! | TTCATTTGTAAGATTTGTCA+TGG | - | chr7_2:67437828-67437847 | Msa1071040:intron | 25.0% |
| ! | TTTGTAATTGTATGTCTGTA+TGG | + | chr7_2:67437913-67437932 | None:intergenic | 25.0% |
| ! | CGTAGTTTACTATAATTCAA+TGG | - | chr7_2:67438143-67438162 | Msa1071040:intron | 25.0% |
| ! | TGTATGCATATATATGAGTT+AGG | - | chr7_2:67438274-67438293 | Msa1071040:intron | 25.0% |
| !!! | GTAGGTTTTTGTTTTATTCT+TGG | - | chr7_2:67438397-67438416 | Msa1071040:intron | 25.0% |
| !!! | ATAAGAATTTGTTGGAATAG+AGG | + | chr7_2:67438476-67438495 | None:intergenic | 25.0% |
| ! | CTATTCCAACAAATTCTTAT+AGG | - | chr7_2:67438476-67438495 | Msa1071040:intron | 25.0% |
| ! | CAATTCCTATAAGAATTTGT+TGG | + | chr7_2:67438484-67438503 | None:intergenic | 25.0% |
| ! | ATGCAAATTGATATTAAAGG+GGG | + | chr7_2:67438520-67438539 | None:intergenic | 25.0% |
| !!! | AATTTGCATTTTAAGTCACA+AGG | - | chr7_2:67438531-67438550 | Msa1071040:intron | 25.0% |
| ! | CAATTACTAAAAGCGAAATT+TGG | - | chr7_2:67438584-67438603 | Msa1071040:intron | 25.0% |
| !! | TTTTTATCTGTCCAAAGAAA+GGG | + | chr7_2:67438665-67438684 | None:intergenic | 25.0% |
| !!! | TTTTTTATCTGTCCAAAGAA+AGG | + | chr7_2:67438666-67438685 | None:intergenic | 25.0% |
| ! | AACTTAAAAATTTGTACGAC+AGG | + | chr7_2:67438695-67438714 | None:intergenic | 25.0% |
| !!! | CGTACAAATTTTTAAGTTCA+TGG | - | chr7_2:67438697-67438716 | Msa1071040:intron | 25.0% |
| !! | AAACATAAAATTGATGGCAA+CGG | - | chr7_2:67438778-67438797 | Msa1071040:intron | 25.0% |
| ! | TTTAAGAGGATCCATAAAAT+TGG | - | chr7_2:67438811-67438830 | Msa1071040:intron | 25.0% |
| ! | TTTCATCAAAACCATGAAAT+TGG | + | chr7_2:67438883-67438902 | None:intergenic | 25.0% |
| ! | TGATGAAATTGAAAACTTCA+TGG | - | chr7_2:67438895-67438914 | Msa1071040:intron | 25.0% |
| ! | AACTATATATATATGCTAGG+TGG | - | chr7_2:67439123-67439142 | Msa1071040:intron | 25.0% |
| ! | TTAGCATTTGGTAGATAAAT+AGG | - | chr7_2:67439251-67439270 | Msa1071040:intron | 25.0% |
| !! | GATAAATAGGTTTAAGACTT+TGG | - | chr7_2:67439264-67439283 | Msa1071040:intron | 25.0% |
| ! | ATAACCATTTAATGTATGAG+TGG | - | chr7_2:67439325-67439344 | Msa1071040:intron | 25.0% |
| ! | ATAACCACTCATACATTAAA+TGG | + | chr7_2:67439332-67439351 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTGACAGAGTCT+TGG | + | chr7_2:67439539-67439558 | None:intergenic | 25.0% |
| ! | GACTCTGTCAAAAAAAAAAT+AGG | - | chr7_2:67439540-67439559 | Msa1071040:intron | 25.0% |
| !! | AAAAAATAGGTCTAAGACTT+TGG | - | chr7_2:67439553-67439572 | Msa1071040:intron | 25.0% |
| ! | TAGTTTATACAAAGATCATG+CGG | + | chr7_2:67439688-67439707 | None:intergenic | 25.0% |
| !! | TAAGTCCTTGTTTATATGTT+TGG | + | chr7_2:67439780-67439799 | None:intergenic | 25.0% |
| ! | TTTAGTCAATAAAACGCAAA+AGG | + | chr7_2:67439952-67439971 | None:intergenic | 25.0% |
| ! | AAGTCAGAAATGTTCAATAA+TGG | + | chr7_2:67440457-67440476 | None:intergenic | 25.0% |
| ! | TAAATCCACATCAATATATG+GGG | + | chr7_2:67440698-67440717 | None:intergenic | 25.0% |
| ! | CTTAAATCCACATCAATATA+TGG | + | chr7_2:67440700-67440719 | None:intergenic | 25.0% |
| ! | TGAAGCTGTTTGTAAAATTA+TGG | - | chr7_2:67440798-67440817 | Msa1071040:CDS | 25.0% |
| ! | GAAGCTGTTTGTAAAATTAT+GGG | - | chr7_2:67440799-67440818 | Msa1071040:CDS | 25.0% |
| ! | AGATACAATAAGTAGTTACT+TGG | + | chr7_2:67440857-67440876 | None:intergenic | 25.0% |
| ! | GTAACTACTTATTGTATCTT+TGG | - | chr7_2:67440858-67440877 | Msa1071040:CDS | 25.0% |
| ! | ACTTGCTCAATATAAATGTT+TGG | + | chr7_2:67441176-67441195 | None:intergenic | 25.0% |
| GGTTTGAATCTGAATCAAAT+TGG | + | chr7_2:67436834-67436853 | None:intergenic | 30.0% | |
| CAAAAATGTCACAAATTAGG+GGG | + | chr7_2:67437128-67437147 | None:intergenic | 30.0% | |
| CCAAAAATGTCACAAATTAG+GGG | + | chr7_2:67437129-67437148 | None:intergenic | 30.0% | |
| CACCAAAAATGTCACAAATT+AGG | + | chr7_2:67437131-67437150 | None:intergenic | 30.0% | |
| !! | AGGAGTATTTAACTCTAAAG+AGG | + | chr7_2:67437316-67437335 | None:intergenic | 30.0% |
| TTGTTTGTCACAATAGTGAA+CGG | + | chr7_2:67437356-67437375 | None:intergenic | 30.0% | |
| GGTTTGAGCTAATGAATTAA+AGG | - | chr7_2:67437419-67437438 | Msa1071040:intron | 30.0% | |
| AGCTAATGAATTAAAGGAGT+TGG | - | chr7_2:67437425-67437444 | Msa1071040:intron | 30.0% | |
| GCTAATGAATTAAAGGAGTT+GGG | - | chr7_2:67437426-67437445 | Msa1071040:intron | 30.0% | |
| AAATTGTAAACATGGTAGGA+GGG | + | chr7_2:67437675-67437694 | None:intergenic | 30.0% | |
| AAAATTGTAAACATGGTAGG+AGG | + | chr7_2:67437676-67437695 | None:intergenic | 30.0% | |
| GGAAAAATTGTAAACATGGT+AGG | + | chr7_2:67437679-67437698 | None:intergenic | 30.0% | |
| ATCGCAAAATGATACATCAA+TGG | + | chr7_2:67437878-67437897 | None:intergenic | 30.0% | |
| ! | ATTGATGTATCATTTTGCGA+TGG | - | chr7_2:67437877-67437896 | Msa1071040:intron | 30.0% |
| GCACAAAATTATCACAAACA+TGG | - | chr7_2:67437966-67437985 | Msa1071040:intron | 30.0% | |
| CAAAATTATCACAAACATGG+CGG | - | chr7_2:67437969-67437988 | Msa1071040:intron | 30.0% | |
| ACAAATTAGGAGAGAAATCA+GGG | + | chr7_2:67438035-67438054 | None:intergenic | 30.0% | |
| AACAAATTAGGAGAGAAATC+AGG | + | chr7_2:67438036-67438055 | None:intergenic | 30.0% | |
| !! | TCCTAATTTGTTTGCCAAAA+CGG | - | chr7_2:67438044-67438063 | Msa1071040:intron | 30.0% |
| ! | AAAATTTGATATCCCCGTTT+TGG | + | chr7_2:67438061-67438080 | None:intergenic | 30.0% |
| GAAACGAGAACAATTAATCA+TGG | + | chr7_2:67438169-67438188 | None:intergenic | 30.0% | |
| TCGCTCCCTATATATATTAA+AGG | - | chr7_2:67438217-67438236 | Msa1071040:intron | 30.0% | |
| CGCTCCCTATATATATTAAA+GGG | - | chr7_2:67438218-67438237 | Msa1071040:intron | 30.0% | |
| GCTGCCCTTTAATATATATA+GGG | + | chr7_2:67438225-67438244 | None:intergenic | 30.0% | |
| TATGCATACAATACACCAAA+TGG | + | chr7_2:67438264-67438283 | None:intergenic | 30.0% | |
| GAATAGAGGTGAAATTTCAT+CGG | + | chr7_2:67438462-67438481 | None:intergenic | 30.0% | |
| AAATTGATATTAAAGGGGGA+AGG | + | chr7_2:67438516-67438535 | None:intergenic | 30.0% | |
| !! | AGCTAATTGAAGAGAGTATT+AGG | - | chr7_2:67438557-67438576 | Msa1071040:intron | 30.0% |
| TAAAAGCGAAATTTGGACAA+AGG | - | chr7_2:67438591-67438610 | Msa1071040:intron | 30.0% | |
| ATGGATCCTCTTAAAGATTT+AGG | + | chr7_2:67438806-67438825 | None:intergenic | 30.0% | |
| TTAGTAACTGAATTTCTGTG+TGG | - | chr7_2:67438945-67438964 | Msa1071040:intron | 30.0% | |
| CCAAATCTCATCCATTAAAT+TGG | + | chr7_2:67439082-67439101 | None:intergenic | 30.0% | |
| ! | CCAATTTAATGGATGAGATT+TGG | - | chr7_2:67439079-67439098 | Msa1071040:intron | 30.0% |
| ATAAGCTGTTTAATGCTTAC+AGG | - | chr7_2:67439354-67439373 | Msa1071040:intron | 30.0% | |
| TAAGCTGTTTAATGCTTACA+GGG | - | chr7_2:67439355-67439374 | Msa1071040:intron | 30.0% | |
| CTCTTCCAAACATATAAACA+AGG | - | chr7_2:67439772-67439791 | Msa1071040:intron | 30.0% | |
| AAAACCTGAGTTTATGTGAT+GGG | - | chr7_2:67440330-67440349 | Msa1071040:intron | 30.0% | |
| GAATAGTGAAAAACTCCATA+AGG | + | chr7_2:67440390-67440409 | None:intergenic | 30.0% | |
| AAGATTTATGCCTATGTTGA+TGG | - | chr7_2:67440417-67440436 | Msa1071040:intron | 30.0% | |
| TGCTTACAATAGTCTTTACT+TGG | - | chr7_2:67440580-67440599 | Msa1071040:intron | 30.0% | |
| ! | ATACTTAACAGTCCTTTTGA+TGG | + | chr7_2:67440653-67440672 | None:intergenic | 30.0% |
| AAATCCACATCAATATATGG+GGG | + | chr7_2:67440697-67440716 | None:intergenic | 30.0% | |
| ! | TACAAACAGCTTCATCTTTT+GGG | + | chr7_2:67440792-67440811 | None:intergenic | 30.0% |
| ! | TTACAAACAGCTTCATCTTT+TGG | + | chr7_2:67440793-67440812 | None:intergenic | 30.0% |
| TTTGTAAAATTATGGGCCAA+AGG | - | chr7_2:67440806-67440825 | Msa1071040:CDS | 30.0% | |
| TTGTAAAATTATGGGCCAAA+GGG | - | chr7_2:67440807-67440826 | Msa1071040:CDS | 30.0% | |
| !! | AGTAGTTACTTGGTTTTCTT+TGG | + | chr7_2:67440847-67440866 | None:intergenic | 30.0% |
| ACTACTTATTGTATCTTTGG+TGG | - | chr7_2:67440861-67440880 | Msa1071040:CDS | 30.0% | |
| CCAAGAATCAACTAATAAGA+TGG | + | chr7_2:67440937-67440956 | None:intergenic | 30.0% | |
| ! | CCATCTTATTAGTTGATTCT+TGG | - | chr7_2:67440934-67440953 | Msa1071040:CDS | 30.0% |
| CAGTTATTGTGAACAAAACT+AGG | + | chr7_2:67440986-67441005 | None:intergenic | 30.0% | |
| ACATATCCGATAAACATACA+AGG | + | chr7_2:67441103-67441122 | None:intergenic | 30.0% | |
| !! | TATTTTTGCCGGAATCTTTG+CGG | + | chr7_2:67436633-67436652 | None:intergenic | 35.0% |
| ATTGGTGAAGAACTTGAAGA+TGG | + | chr7_2:67436816-67436835 | None:intergenic | 35.0% | |
| TGACAGATTCATTTGAAAGC+TGG | - | chr7_2:67436979-67436998 | Msa1071040:intron | 35.0% | |
| TCATCTCCTCTGAATACAAT+AGG | + | chr7_2:67437072-67437091 | None:intergenic | 35.0% | |
| !! | CCCCTAATTTGTGACATTTT+TGG | - | chr7_2:67437126-67437145 | Msa1071040:intron | 35.0% |
| ! | GAGTTAAATACTCCTGCTTT+TGG | - | chr7_2:67437321-67437340 | Msa1071040:intron | 35.0% |
| TATCCCTTTGGCAAACAAAT+AGG | - | chr7_2:67437644-67437663 | Msa1071040:intron | 35.0% | |
| CTAAAGCAACGATCATAAGA+AGG | + | chr7_2:67437700-67437719 | None:intergenic | 35.0% | |
| ! | CTTCTTATGATCGTTGCTTT+AGG | - | chr7_2:67437698-67437717 | Msa1071040:intron | 35.0% |
| TACTATTTGCCAAATGCCAA+TGG | - | chr7_2:67437804-67437823 | Msa1071040:intron | 35.0% | |
| CAAATGAATCCATTGGCATT+TGG | + | chr7_2:67437816-67437835 | None:intergenic | 35.0% | |
| !! | CCTAATTTGTTTGCCAAAAC+GGG | - | chr7_2:67438045-67438064 | Msa1071040:intron | 35.0% |
| !! | CTAATTTGTTTGCCAAAACG+GGG | - | chr7_2:67438046-67438065 | Msa1071040:intron | 35.0% |
| GGCTGCCCTTTAATATATAT+AGG | + | chr7_2:67438226-67438245 | None:intergenic | 35.0% | |
| ATATATATTAAAGGGCAGCC+CGG | - | chr7_2:67438226-67438245 | Msa1071040:intron | 35.0% | |
| CATACAATACACCAAATGGT+GGG | + | chr7_2:67438260-67438279 | None:intergenic | 35.0% | |
| GATTAAAAGTTTAGACCGTC+TGG | + | chr7_2:67438317-67438336 | None:intergenic | 35.0% | |
| ! | GGTCTAAACTTTTAATCGAG+CGG | - | chr7_2:67438320-67438339 | Msa1071040:intron | 35.0% |
| CATCTACATGATAACTTGAG+TGG | - | chr7_2:67438352-67438371 | Msa1071040:intron | 35.0% | |
| CAAAGGTTATACCCTTTCTT+TGG | - | chr7_2:67438651-67438670 | Msa1071040:intron | 35.0% | |
| AAAAATTTGTACGACAGGCA+TGG | + | chr7_2:67438690-67438709 | None:intergenic | 35.0% | |
| GATCTTAAAGATGAACGCAA+GGG | + | chr7_2:67438743-67438762 | None:intergenic | 35.0% | |
| AGATCTTAAAGATGAACGCA+AGG | + | chr7_2:67438744-67438763 | None:intergenic | 35.0% | |
| ACGGATCCTAAATCTTTAAG+AGG | - | chr7_2:67438797-67438816 | Msa1071040:intron | 35.0% | |
| AATTTCTGTGTGGTCAATTC+TGG | - | chr7_2:67438955-67438974 | Msa1071040:intron | 35.0% | |
| ATTTCTGTGTGGTCAATTCT+GGG | - | chr7_2:67438956-67438975 | Msa1071040:intron | 35.0% | |
| ATGAAGTTCTCTGTTCCATA+TGG | - | chr7_2:67439169-67439188 | Msa1071040:intron | 35.0% | |
| TGGATATCCATAACAAAGTG+TGG | - | chr7_2:67439193-67439212 | Msa1071040:intron | 35.0% | |
| ! | TTCAAGTTCTCTGTTCCATA+TGG | - | chr7_2:67439427-67439446 | Msa1071040:intron | 35.0% |
| TGTTCCATATGGCTATTCAT+AGG | - | chr7_2:67439438-67439457 | Msa1071040:intron | 35.0% | |
| CTTTCCTATGAATAGCCATA+TGG | + | chr7_2:67439445-67439464 | None:intergenic | 35.0% | |
| !! | TCTAAGACTTTGGAGTTGTT+TGG | - | chr7_2:67439563-67439582 | Msa1071040:intron | 35.0% |
| ACTGAAGTGTAAACAGTGTA+TGG | - | chr7_2:67439724-67439743 | Msa1071040:intron | 35.0% | |
| CTGAAGTGTAAACAGTGTAT+GGG | - | chr7_2:67439725-67439744 | Msa1071040:intron | 35.0% | |
| TGAAGTGTAAACAGTGTATG+GGG | - | chr7_2:67439726-67439745 | Msa1071040:intron | 35.0% | |
| ! | AGTAAGATTTGTATCGGTGA+AGG | - | chr7_2:67439834-67439853 | Msa1071040:intron | 35.0% |
| ! | GTAAGATTTGTATCGGTGAA+GGG | - | chr7_2:67439835-67439854 | Msa1071040:intron | 35.0% |
| !! | AGCAGCATTCTAAAATTCAG+AGG | + | chr7_2:67440197-67440216 | None:intergenic | 35.0% |
| ! | TTTAGAATGCTGCTCTGTAT+TGG | - | chr7_2:67440203-67440222 | Msa1071040:intron | 35.0% |
| TTAGAATGCTGCTCTGTATT+GGG | - | chr7_2:67440204-67440223 | Msa1071040:intron | 35.0% | |
| GTAACAATAACTAGCACAAC+AGG | + | chr7_2:67440286-67440305 | None:intergenic | 35.0% | |
| GAAAACCTGAGTTTATGTGA+TGG | - | chr7_2:67440329-67440348 | Msa1071040:intron | 35.0% | |
| AAACCTGAGTTTATGTGATG+GGG | - | chr7_2:67440331-67440350 | Msa1071040:intron | 35.0% | |
| CTTCCTTGAATACCATCAAA+AGG | - | chr7_2:67440638-67440657 | Msa1071040:intron | 35.0% | |
| !! | AGTCCTTTTGATGGTATTCA+AGG | + | chr7_2:67440644-67440663 | None:intergenic | 35.0% |
| TATTCCCCCATATATTGATG+TGG | - | chr7_2:67440690-67440709 | Msa1071040:CDS | 35.0% | |
| TGATGTGGATTTAAGTGAGT+TGG | - | chr7_2:67440705-67440724 | Msa1071040:CDS | 35.0% | |
| ! | GATTTAAGTGAGTTGGATGT+GGG | - | chr7_2:67440712-67440731 | Msa1071040:CDS | 35.0% |
| TACCGACCTTGTATGTTTAT+CGG | - | chr7_2:67441094-67441113 | Msa1071040:CDS | 35.0% | |
| ATCCGATAAACATACAAGGT+CGG | + | chr7_2:67441099-67441118 | None:intergenic | 35.0% | |
| !!! | GTTTTGGGTTTTGGGTTTTG+CGG | + | chr7_2:67436420-67436439 | None:intergenic | 40.0% |
| !!! | GAGAAAGGGTTTTGGGTTTT+GGG | + | chr7_2:67436428-67436447 | None:intergenic | 40.0% |
| !!! | AGAGAAAGGGTTTTGGGTTT+TGG | + | chr7_2:67436429-67436448 | None:intergenic | 40.0% |
| ! | TGGTGAAGAGAAAGGGTTTT+GGG | + | chr7_2:67436435-67436454 | None:intergenic | 40.0% |
| TGCATTGTGGTGAAGAGAAA+GGG | + | chr7_2:67436442-67436461 | None:intergenic | 40.0% | |
| ATGCATTGTGGTGAAGAGAA+AGG | + | chr7_2:67436443-67436462 | None:intergenic | 40.0% | |
| !! | TCGTACTTTGGGTTAGGTTT+TGG | + | chr7_2:67436589-67436608 | None:intergenic | 40.0% |
| ! | ATTTTTGCCGGAATCTTTGC+GGG | + | chr7_2:67436632-67436651 | None:intergenic | 40.0% |
| AACGAGTTTCCTGATCTGAT+CGG | + | chr7_2:67436755-67436774 | None:intergenic | 40.0% | |
| AGGAAACTCGTTAACCATCT+CGG | - | chr7_2:67436763-67436782 | Msa1071040:CDS | 40.0% | |
| GAAGAACTTGAAGATGGAAG+AGG | + | chr7_2:67436810-67436829 | None:intergenic | 40.0% | |
| CGATGATGTCTTCGTCATTA+GGG | + | chr7_2:67436855-67436874 | None:intergenic | 40.0% | |
| TCGATGATGTCTTCGTCATT+AGG | + | chr7_2:67436856-67436875 | None:intergenic | 40.0% | |
| ACTTTCAACCAAGCATCTGA+CGG | + | chr7_2:67437042-67437061 | None:intergenic | 40.0% | |
| GACGTTCCTATTGTATTCAG+AGG | - | chr7_2:67437063-67437082 | Msa1071040:intron | 40.0% | |
| AGAGGAGATGATATATCTCC+TGG | - | chr7_2:67437081-67437100 | Msa1071040:intron | 40.0% | |
| ATATCTCCTGGACTCAAGAA+AGG | - | chr7_2:67437093-67437112 | Msa1071040:intron | 40.0% | |
| ATCTAACCTTTCTTGAGTCC+AGG | + | chr7_2:67437102-67437121 | None:intergenic | 40.0% | |
| TTGTCACAATAGTGAACGGA+AGG | + | chr7_2:67437352-67437371 | None:intergenic | 40.0% | |
| AGCAGTTAATCATAGCAGCT+TGG | - | chr7_2:67437377-67437396 | Msa1071040:intron | 40.0% | |
| GCAGTTAATCATAGCAGCTT+GGG | - | chr7_2:67437378-67437397 | Msa1071040:intron | 40.0% | |
| ! | TAAAGTCCAGCTTTCAAGTC+TGG | - | chr7_2:67437453-67437472 | Msa1071040:intron | 40.0% |
| CCTCCTATTTGTTTGCCAAA+GGG | + | chr7_2:67437650-67437669 | None:intergenic | 40.0% | |
| CCTTTGGCAAACAAATAGGA+GGG | - | chr7_2:67437648-67437667 | Msa1071040:intron | 40.0% | |
| ! | GATGTATCATTTTGCGATGG+TGG | - | chr7_2:67437880-67437899 | Msa1071040:intron | 40.0% |
| CAAGTTCTATTGCACATCGT+TGG | + | chr7_2:67438003-67438022 | None:intergenic | 40.0% | |
| CAACGATGTGCAATAGAACT+TGG | - | chr7_2:67438001-67438020 | Msa1071040:intron | 40.0% | |
| !! | CCCGTTTTGGCAAACAAATT+AGG | + | chr7_2:67438048-67438067 | None:intergenic | 40.0% |
| ATATATATAGGGAGCGACTC+AGG | + | chr7_2:67438214-67438233 | None:intergenic | 40.0% | |
| TATATATTAAAGGGCAGCCC+GGG | - | chr7_2:67438227-67438246 | Msa1071040:intron | 40.0% | |
| GCATACAATACACCAAATGG+TGG | + | chr7_2:67438261-67438280 | None:intergenic | 40.0% | |
| AAGTTTAGACCGTCTGGATT+TGG | + | chr7_2:67438311-67438330 | None:intergenic | 40.0% | |
| !! | TTGGTAGTGATTACGTTTCC+AGG | - | chr7_2:67438416-67438435 | Msa1071040:intron | 40.0% |
| ! | AAAGGGTATAACCTTTGTCC+AGG | + | chr7_2:67438648-67438667 | None:intergenic | 40.0% |
| ! | GGGAGTGTAGAAATTGAGAT+CGG | - | chr7_2:67438976-67438995 | Msa1071040:intron | 40.0% |
| AGAAATTGAGATCGGTGAAG+AGG | - | chr7_2:67438984-67439003 | Msa1071040:intron | 40.0% | |
| !! | TGGATGAGATTTGGTGTCAA+TGG | - | chr7_2:67439088-67439107 | Msa1071040:intron | 40.0% |
| GTTATGGATATCCAGCCATA+TGG | + | chr7_2:67439187-67439206 | None:intergenic | 40.0% | |
| CACTGTACCACACTTTGTTA+TGG | + | chr7_2:67439203-67439222 | None:intergenic | 40.0% | |
| !! | TGCTTACAGGGTTTTATGCT+AGG | - | chr7_2:67439367-67439386 | Msa1071040:intron | 40.0% |
| !! | TTACAGGGTTTTATGCTAGG+TGG | - | chr7_2:67439370-67439389 | Msa1071040:intron | 40.0% |
| TAAAACGCAAAAGGACCGTT+CGG | + | chr7_2:67439943-67439962 | None:intergenic | 40.0% | |
| TTTGATGCCTTGTAACCTAG+CGG | + | chr7_2:67440096-67440115 | None:intergenic | 40.0% | |
| ! | AGTTTATGTGATGGGGTAGA+CGG | - | chr7_2:67440338-67440357 | Msa1071040:intron | 40.0% |
| TCACTTTGCACCATCAACAT+AGG | + | chr7_2:67440430-67440449 | None:intergenic | 40.0% | |
| ! | CTCATCACCACAATTTTTGC+AGG | - | chr7_2:67440613-67440632 | Msa1071040:intron | 40.0% |
| ! | GGATTTAAGTGAGTTGGATG+TGG | - | chr7_2:67440711-67440730 | Msa1071040:CDS | 40.0% |
| !! | GGGTGAAGAAGTTTTAATGC+AGG | + | chr7_2:67440772-67440791 | None:intergenic | 40.0% |
| GTTGTGTTTCAGAAACCCTT+TGG | + | chr7_2:67440825-67440844 | None:intergenic | 40.0% | |
| ! | TGTAGAGCTTTGTGTAACTC+AGG | + | chr7_2:67441051-67441070 | None:intergenic | 40.0% |
| TGAGGATAGTTGAGAGGAGA+GGG | + | chr7_2:67436394-67436413 | None:intergenic | 45.0% | |
| !!! | TTTTGGGTTTTGCGGTAGTG+AGG | + | chr7_2:67436412-67436431 | None:intergenic | 45.0% |
| ! | GTGGTGAAGAGAAAGGGTTT+TGG | + | chr7_2:67436436-67436455 | None:intergenic | 45.0% |
| AGGTTAGGGGTTGTAGTATG+TGG | + | chr7_2:67436552-67436571 | None:intergenic | 45.0% | |
| ! | GTTTCGTCGTACTTTGGGTT+AGG | + | chr7_2:67436595-67436614 | None:intergenic | 45.0% |
| GGATGGTTTCGTCGTACTTT+GGG | + | chr7_2:67436600-67436619 | None:intergenic | 45.0% | |
| AGGATGGTTTCGTCGTACTT+TGG | + | chr7_2:67436601-67436620 | None:intergenic | 45.0% | |
| ! | TTTTTGCCGGAATCTTTGCG+GGG | + | chr7_2:67436631-67436650 | None:intergenic | 45.0% |
| !! | CTTGGCGGAGATATTTTTGC+CGG | + | chr7_2:67436644-67436663 | None:intergenic | 45.0% |
| ATCGTCTTCGAACAGGAAGA+CGG | - | chr7_2:67436691-67436710 | Msa1071040:three_prime_UTR | 45.0% | |
| ACTCAAATGCATACACTGCG+AGG | + | chr7_2:67436895-67436914 | None:intergenic | 45.0% | |
| GTTAATCATAGCAGCTTGGG+CGG | - | chr7_2:67437381-67437400 | Msa1071040:intron | 45.0% | |
| CCCTTTGGCAAACAAATAGG+AGG | - | chr7_2:67437647-67437666 | Msa1071040:intron | 45.0% | |
| CCCTCCTATTTGTTTGCCAA+AGG | + | chr7_2:67437651-67437670 | None:intergenic | 45.0% | |
| GTTCTATTGCACATCGTTGG+TGG | + | chr7_2:67438000-67438019 | None:intergenic | 45.0% | |
| TACAACACGTGAGTACAGAG+GGG | + | chr7_2:67438380-67438399 | None:intergenic | 45.0% | |
| CTACAACACGTGAGTACAGA+GGG | + | chr7_2:67438381-67438400 | None:intergenic | 45.0% | |
| ! | ATTTCATCGGCTGCAGAAGA+GGG | + | chr7_2:67438449-67438468 | None:intergenic | 45.0% |
| ! | AATTTCATCGGCTGCAGAAG+AGG | + | chr7_2:67438450-67438469 | None:intergenic | 45.0% |
| AGAGGAATGTTCCTGGACAA+AGG | - | chr7_2:67438634-67438653 | Msa1071040:intron | 45.0% | |
| !! | AGATCGGTGAAGAGGTACTA+AGG | - | chr7_2:67438992-67439011 | Msa1071040:intron | 45.0% |
| AGTTCTCTGTTCCATATGGC+TGG | - | chr7_2:67439173-67439192 | Msa1071040:intron | 45.0% | |
| ATGCTAGGTGGTATGTGCAA+TGG | - | chr7_2:67439135-67439154 | Msa1071040:intron | 45.0% | |
| TGCTAGGTGGTATGTGCAAT+GGG | - | chr7_2:67439383-67439402 | Msa1071040:intron | 45.0% | |
| TGGCTATTCATAGGAAAGCG+TGG | - | chr7_2:67439447-67439466 | Msa1071040:intron | 45.0% | |
| CCTCAATAAGCTCTTCCGAA+CGG | - | chr7_2:67439925-67439944 | Msa1071040:intron | 45.0% | |
| AATACTCCAGTCACCACTGT+GGG | - | chr7_2:67439999-67440018 | Msa1071040:intron | 45.0% | |
| ATAACCTTACCATGAGCGTC+AGG | - | chr7_2:67440044-67440063 | Msa1071040:intron | 45.0% | |
| TAGAAACAACCTGACGCTCA+TGG | + | chr7_2:67440056-67440075 | None:intergenic | 45.0% | |
| TGCTCTGTATTGGGATGACA+AGG | - | chr7_2:67440213-67440232 | Msa1071040:intron | 45.0% | |
| CTACCCCATCACATAAACTC+AGG | + | chr7_2:67440337-67440356 | None:intergenic | 45.0% | |
| !! | TGTTGATGGTGCAAAGTGAC+TGG | - | chr7_2:67440431-67440450 | Msa1071040:intron | 45.0% |
| GTCCATATCAGTTAGAGCAG+GGG | + | chr7_2:67440490-67440509 | None:intergenic | 45.0% | |
| CGTCCATATCAGTTAGAGCA+GGG | + | chr7_2:67440491-67440510 | None:intergenic | 45.0% | |
| TCTAACTGATATGGACGCCT+TGG | - | chr7_2:67440494-67440513 | Msa1071040:CDS | 45.0% | |
| !! | GGAAGCACCTGCAAAAATTG+TGG | + | chr7_2:67440623-67440642 | None:intergenic | 45.0% |
| ATGGGGGAATAATGTCTGCA+GGG | + | chr7_2:67440681-67440700 | None:intergenic | 45.0% | |
| TATGGGGGAATAATGTCTGC+AGG | + | chr7_2:67440682-67440701 | None:intergenic | 45.0% | |
| GTGAGGATAGTTGAGAGGAG+AGG | + | chr7_2:67436395-67436414 | None:intergenic | 50.0% | |
| CGGTAGTGAGGATAGTTGAG+AGG | + | chr7_2:67436400-67436419 | None:intergenic | 50.0% | |
| ! | GATTAAGGCGTTTGCGATGG+CGG | + | chr7_2:67436512-67436531 | None:intergenic | 50.0% |
| ! | GTGGATTAAGGCGTTTGCGA+TGG | + | chr7_2:67436515-67436534 | None:intergenic | 50.0% |
| !! | TGGCTCTGGAGTGTGGATTA+AGG | + | chr7_2:67436527-67436546 | None:intergenic | 50.0% |
| ! | TGTAGTATGTGGTCTGGCTC+TGG | + | chr7_2:67436541-67436560 | None:intergenic | 50.0% |
| AGGGGTTGTAGTATGTGGTC+TGG | + | chr7_2:67436547-67436566 | None:intergenic | 50.0% | |
| AAAGCCGTCGAGGTAGGTTA+GGG | + | chr7_2:67436566-67436585 | None:intergenic | 50.0% | |
| !! | TTTTGGAAAGCCGTCGAGGT+AGG | + | chr7_2:67436572-67436591 | None:intergenic | 50.0% |
| !!! | TAGGTTTTGGAAAGCCGTCG+AGG | + | chr7_2:67436576-67436595 | None:intergenic | 50.0% |
| CGGCAAAAATATCTCCGCCA+AGG | - | chr7_2:67436642-67436661 | Msa1071040:three_prime_UTR | 50.0% | |
| TCCTGTTCGAAGACGATGCT+CGG | + | chr7_2:67436688-67436707 | None:intergenic | 50.0% | |
| GATCGGAACGAACGGAAATG+AGG | + | chr7_2:67436738-67436757 | None:intergenic | 50.0% | |
| CCTGATCTGATCGGAACGAA+CGG | + | chr7_2:67436746-67436765 | None:intergenic | 50.0% | |
| CGGAAGGAAAGACCAAAAGC+AGG | + | chr7_2:67437336-67437355 | None:intergenic | 50.0% | |
| ! | TCCAGCTTTCAAGTCTGGCA+GGG | - | chr7_2:67437458-67437477 | Msa1071040:intron | 50.0% |
| !! | CCGTCTGGATTTGGTGTCAA+CGG | + | chr7_2:67438302-67438321 | None:intergenic | 50.0% |
| CCGTTGACACCAAATCCAGA+CGG | - | chr7_2:67438299-67438318 | Msa1071040:intron | 50.0% | |
| ACAACACGTGAGTACAGAGG+GGG | + | chr7_2:67438379-67438398 | None:intergenic | 50.0% | |
| CCTACAACACGTGAGTACAG+AGG | + | chr7_2:67438382-67438401 | None:intergenic | 50.0% | |
| CCTCTGTACTCACGTGTTGT+AGG | - | chr7_2:67438379-67438398 | Msa1071040:intron | 50.0% | |
| !! | GGACAAAGGCATTTACGTCG+TGG | - | chr7_2:67438605-67438624 | Msa1071040:intron | 50.0% |
| TTTACGTCGTGGTTGTGCAG+AGG | - | chr7_2:67438616-67438635 | Msa1071040:intron | 50.0% | |
| GTTGTGCAGAGGAATGTTCC+TGG | - | chr7_2:67438627-67438646 | Msa1071040:intron | 50.0% | |
| TGCTAGGTGGTATGTGCAAC+AGG | - | chr7_2:67439136-67439155 | Msa1071040:intron | 50.0% | |
| CCGTTCGGAAGAGCTTATTG+AGG | + | chr7_2:67439928-67439947 | None:intergenic | 50.0% | |
| GAATACTCCAGTCACCACTG+TGG | - | chr7_2:67439998-67440017 | Msa1071040:intron | 50.0% | |
| ATACTCCAGTCACCACTGTG+GGG | - | chr7_2:67440000-67440019 | Msa1071040:intron | 50.0% | |
| ACTCTCACTAAACCCCACAG+TGG | + | chr7_2:67440015-67440034 | None:intergenic | 50.0% | |
| ACAACCTGACGCTCATGGTA+AGG | + | chr7_2:67440051-67440070 | None:intergenic | 50.0% | |
| GACCCCTGCTCTAACTGATA+TGG | - | chr7_2:67440485-67440504 | Msa1071040:CDS | 50.0% | |
| GCGTCCATATCAGTTAGAGC+AGG | + | chr7_2:67440492-67440511 | None:intergenic | 50.0% | |
| CTGATATGGACGCCTTGGTA+TGG | - | chr7_2:67440499-67440518 | Msa1071040:CDS | 50.0% | |
| CAACCCCTAACCTACCTCGA+CGG | - | chr7_2:67436559-67436578 | Msa1071040:three_prime_UTR | 55.0% | |
| AAGCCGTCGAGGTAGGTTAG+GGG | + | chr7_2:67436565-67436584 | None:intergenic | 55.0% | |
| GAAAGCCGTCGAGGTAGGTT+AGG | + | chr7_2:67436567-67436586 | None:intergenic | 55.0% | |
| AATCTTTGCGGGGAATGGCG+AGG | + | chr7_2:67436621-67436640 | None:intergenic | 55.0% | |
| GCCATTCCCCGCAAAGATTC+CGG | - | chr7_2:67436622-67436641 | Msa1071040:three_prime_UTR | 55.0% | |
| ! | TCCGCCAAGGAGCGTAAAGT+TGG | - | chr7_2:67436655-67436674 | Msa1071040:three_prime_UTR | 55.0% |
| GCCAACTTTACGCTCCTTGG+CGG | + | chr7_2:67436659-67436678 | None:intergenic | 55.0% | |
| ! | TCCGAGCATCGTCTTCGAAC+AGG | - | chr7_2:67436684-67436703 | Msa1071040:three_prime_UTR | 55.0% |
| GAACAGGAAGACGGTCAGCA+CGG | - | chr7_2:67436700-67436719 | Msa1071040:exon | 55.0% | |
| CCGTTCGTTCCGATCAGATC+AGG | - | chr7_2:67436743-67436762 | Msa1071040:CDS | 55.0% | |
| GGCGTGAGAGGAAGAAGGAA+CGG | + | chr7_2:67436789-67436808 | None:intergenic | 55.0% | |
| ! | GAAGAGGCGTGAGAGGAAGA+AGG | + | chr7_2:67436794-67436813 | None:intergenic | 55.0% |
| ! | GAAGATGGAAGAGGCGTGAG+AGG | + | chr7_2:67436801-67436820 | None:intergenic | 55.0% |
| TAAGGGCTCCGTCAGATGCT+TGG | - | chr7_2:67437031-67437050 | Msa1071040:intron | 55.0% | |
| ATCATAGCAGCTTGGGCGGT+TGG | - | chr7_2:67437385-67437404 | Msa1071040:intron | 55.0% | |
| GGGCGGTTGGATAGCTCAAT+TGG | - | chr7_2:67437398-67437417 | Msa1071040:intron | 55.0% | |
| ! | GTCCAGCTTTCAAGTCTGGC+AGG | - | chr7_2:67437457-67437476 | Msa1071040:intron | 55.0% |
| TCCCTGCCAGACTTGAAAGC+TGG | + | chr7_2:67437462-67437481 | None:intergenic | 55.0% | |
| TATTAAAGGGCAGCCCGGGA+AGG | - | chr7_2:67438231-67438250 | Msa1071040:intron | 55.0% | |
| ATTAAAGGGCAGCCCGGGAA+GGG | - | chr7_2:67438232-67438251 | Msa1071040:intron | 55.0% | |
| GCAGAAGAGGGAGGTAAACC+TGG | + | chr7_2:67438437-67438456 | None:intergenic | 55.0% | |
| CTAAACCCCACAGTGGTGAC+TGG | + | chr7_2:67440008-67440027 | None:intergenic | 55.0% | |
| GCTGAAAAGCCATGACCGCT+AGG | - | chr7_2:67440078-67440097 | Msa1071040:intron | 55.0% | |
| GCCATGACCGCTAGGTTACA+AGG | - | chr7_2:67440086-67440105 | Msa1071040:intron | 55.0% | |
| GCCTTGTAACCTAGCGGTCA+TGG | + | chr7_2:67440090-67440109 | None:intergenic | 55.0% | |
| ! | TGAGTTGGATGTGGGCCAGA+AGG | - | chr7_2:67440720-67440739 | Msa1071040:CDS | 55.0% |
| GATCACCCATGAGCACCTTC+TGG | + | chr7_2:67440738-67440757 | None:intergenic | 55.0% | |
| TGTGCGGGGGAGATGCATTG+TGG | + | chr7_2:67436455-67436474 | None:intergenic | 60.0% | |
| !! | TTGCGATGGCGGAGAAGTGG+CGG | + | chr7_2:67436501-67436520 | None:intergenic | 60.0% |
| !! | CGTTTGCGATGGCGGAGAAG+TGG | + | chr7_2:67436504-67436523 | None:intergenic | 60.0% |
| !! | TGTGGTCTGGCTCTGGAGTG+TGG | + | chr7_2:67436534-67436553 | None:intergenic | 60.0% |
| TTTGCGGGGAATGGCGAGGA+TGG | + | chr7_2:67436617-67436636 | None:intergenic | 60.0% | |
| GCCGGAATCTTTGCGGGGAA+TGG | + | chr7_2:67436626-67436645 | None:intergenic | 60.0% | |
| GCGGCCAACTTTACGCTCCT+TGG | + | chr7_2:67436662-67436681 | None:intergenic | 60.0% | |
| CGAAGACGATGCTCGGAACG+CGG | + | chr7_2:67436681-67436700 | None:intergenic | 60.0% | |
| GGAAGAAGGAACGGCCGAGA+TGG | + | chr7_2:67436780-67436799 | None:intergenic | 60.0% | |
| TTAAAGGGCAGCCCGGGAAG+GGG | - | chr7_2:67438233-67438252 | Msa1071040:intron | 60.0% | |
| ! | AAATGGTGGGACCCCTTCCC+GGG | + | chr7_2:67438247-67438266 | None:intergenic | 60.0% |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr7_2:67438248-67438267 | None:intergenic | 60.0% |
| ! | TCATCGGCTGCAGAAGAGGG+AGG | + | chr7_2:67438446-67438465 | None:intergenic | 60.0% |
| !! | TGTGGGCCAGAAGGTGCTCA+TGG | - | chr7_2:67440729-67440748 | Msa1071040:CDS | 60.0% |
| !! | GTGGGCCAGAAGGTGCTCAT+GGG | - | chr7_2:67440730-67440749 | Msa1071040:CDS | 60.0% |
| AAGTGGCGGCGGTGGAGGAA+GGG | + | chr7_2:67436487-67436506 | None:intergenic | 65.0% | |
| CAGGAAGACGGTCAGCACGG+TGG | - | chr7_2:67436703-67436722 | Msa1071040:exon | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr7_2:67438246-67438265 | Msa1071040:intron | 65.0% | |
| ! | AAGGGGCGGAGGAGTGTGCG+GGG | + | chr7_2:67436469-67436488 | None:intergenic | 70.0% |
| ! | GAAGGGGCGGAGGAGTGTGC+GGG | + | chr7_2:67436470-67436489 | None:intergenic | 70.0% |
| ! | GGAAGGGGCGGAGGAGTGTG+CGG | + | chr7_2:67436471-67436490 | None:intergenic | 70.0% |
| AGTGGCGGCGGTGGAGGAAG+GGG | + | chr7_2:67436486-67436505 | None:intergenic | 70.0% | |
| GAAGTGGCGGCGGTGGAGGA+AGG | + | chr7_2:67436488-67436507 | None:intergenic | 70.0% | |
| !! | CGATGGCGGAGAAGTGGCGG+CGG | + | chr7_2:67436498-67436517 | None:intergenic | 70.0% |
| ! | AGGGGCGGAGGAGTGTGCGG+GGG | + | chr7_2:67436468-67436487 | None:intergenic | 75.0% |
| CGGAGAAGTGGCGGCGGTGG+AGG | + | chr7_2:67436492-67436511 | None:intergenic | 75.0% | |
| TGGCGGAGAAGTGGCGGCGG+TGG | + | chr7_2:67436495-67436514 | None:intergenic | 75.0% | |
| ! | GGCGGTGGAGGAAGGGGCGG+AGG | + | chr7_2:67436480-67436499 | None:intergenic | 80.0% |
| ! | GGCGGCGGTGGAGGAAGGGG+CGG | + | chr7_2:67436483-67436502 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 67436349 | 67441226 | 67436349 | ID=Msa1071040;Name=Msa1071040 |
| chr7_2 | mRNA | 67436349 | 67441226 | 67436349 | ID=Msa1071040-mRNA-1;Parent=Msa1071040;Name=Msa1071040-mRNA-1;_AED=0.05;_eAED=0.05;_QI=108|1|1|1|1|1|3|365|266 |
| chr7_2 | exon | 67436349 | 67436940 | 67436349 | ID=Msa1071040-mRNA-1:exon:14604;Parent=Msa1071040-mRNA-1 |
| chr7_2 | exon | 67440461 | 67440590 | 67440461 | ID=Msa1071040-mRNA-1:exon:14603;Parent=Msa1071040-mRNA-1 |
| chr7_2 | exon | 67440675 | 67441226 | 67440675 | ID=Msa1071040-mRNA-1:exon:14602;Parent=Msa1071040-mRNA-1 |
| chr7_2 | five_prime_UTR | 67441119 | 67441226 | 67441119 | ID=Msa1071040-mRNA-1:five_prime_utr;Parent=Msa1071040-mRNA-1 |
| chr7_2 | CDS | 67440675 | 67441118 | 67440675 | ID=Msa1071040-mRNA-1:cds;Parent=Msa1071040-mRNA-1 |
| chr7_2 | CDS | 67440461 | 67440590 | 67440461 | ID=Msa1071040-mRNA-1:cds;Parent=Msa1071040-mRNA-1 |
| chr7_2 | CDS | 67436714 | 67436940 | 67436714 | ID=Msa1071040-mRNA-1:cds;Parent=Msa1071040-mRNA-1 |
| chr7_2 | three_prime_UTR | 67436349 | 67436713 | 67436349 | ID=Msa1071040-mRNA-1:three_prime_utr;Parent=Msa1071040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
