AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0435570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0435570 MtrunA17_Chr3g0142381 99.816 543 1 0 1 543 1 543 0.0 1111
Msa0435570 MtrunA17_Chr3g0130621 31.214 346 206 10 69 405 26 348 8.49e-36 139
Msa0435570 MtrunA17_Chr3g0130621 29.739 306 187 7 30 329 94 377 2.25e-33 132
Msa0435570 MtrunA17_Chr3g0130621 28.313 332 198 11 47 365 58 362 6.20e-26 110
Msa0435570 MtrunA17_Chr8g0384631 27.941 272 174 4 43 314 37 286 8.59e-33 129
Msa0435570 MtrunA17_Chr8g0384631 28.618 304 182 10 86 379 26 304 1.46e-23 102
Msa0435570 MtrunA17_Chr8g0362061 26.343 391 226 13 40 399 269 628 1.75e-24 108
Msa0435570 MtrunA17_Chr8g0362061 27.179 195 126 5 220 404 276 464 5.44e-16 81.6
Msa0435570 MtrunA17_Chr4g0013271 26.854 391 237 15 39 406 49 413 5.61e-24 106
Msa0435570 MtrunA17_Chr4g0013271 28.409 264 156 8 58 310 173 414 5.62e-16 81.6
Msa0435570 MtrunA17_Chr1g0167471 26.873 387 231 14 39 399 257 617 1.80e-23 105
Msa0435570 MtrunA17_Chr1g0167471 25.633 316 181 13 118 405 282 571 1.77e-12 70.1
Msa0435570 MtrunA17_Chr7g0244411 26.649 379 225 14 39 392 247 597 3.02e-23 104
Msa0435570 MtrunA17_Chr7g0244411 26.692 266 159 11 47 299 361 603 1.02e-17 87.0
Msa0435570 MtrunA17_Chr7g0244411 27.083 192 124 5 220 401 255 440 2.70e-13 73.2
Msa0435570 MtrunA17_Chr1g0202151 26.579 380 231 13 43 399 266 620 5.31e-23 103
Msa0435570 MtrunA17_Chr1g0202151 25.000 192 128 5 220 401 270 455 8.87e-14 74.7
Msa0435570 MtrunA17_Chr1g0202151 27.572 243 131 9 20 244 405 620 2.75e-12 69.7
Msa0435570 MtrunA17_Chr3g0123301 29.779 272 158 8 56 310 132 387 5.85e-23 102
Msa0435570 MtrunA17_Chr3g0123301 27.742 310 182 12 114 405 150 435 3.06e-18 87.8
Msa0435570 MtrunA17_Chr3g0123301 25.000 240 153 8 52 277 306 532 2.38e-11 66.2
Msa0435570 MtrunA17_Chr3g0123301 22.034 295 177 6 47 296 189 475 8.37e-11 64.7
Msa0435570 MtrunA17_Chr3g0094741 26.649 379 225 14 47 399 310 661 1.22e-22 102
Msa0435570 MtrunA17_Chr3g0094741 25.521 192 127 4 220 401 310 495 2.26e-15 79.7
Msa0435570 MtrunA17_Chr6g0457381 30.952 252 145 9 39 289 134 357 3.68e-22 99.0
Msa0435570 MtrunA17_Chr6g0457381 26.727 333 217 10 82 405 8 322 7.36e-21 94.7
Msa0435570 MtrunA17_Chr6g0457381 26.829 369 224 13 58 401 38 385 5.22e-20 92.4
Msa0435570 MtrunA17_Chr6g0457381 27.869 305 175 11 20 311 55 327 8.26e-20 91.7
Msa0435570 MtrunA17_Chr6g0457381 27.758 281 182 7 130 405 4 268 4.67e-19 89.4
Msa0435570 MtrunA17_Chr6g0457381 32.143 196 117 7 57 244 196 383 1.07e-17 85.5
Msa0435570 MtrunA17_Chr5g0442001 26.302 384 223 15 45 399 298 650 4.85e-22 100
Msa0435570 MtrunA17_Chr5g0442001 27.027 259 155 6 41 283 397 637 5.21e-18 88.2
Msa0435570 MtrunA17_Chr5g0442001 27.083 192 124 4 220 401 300 485 9.97e-17 84.0
Msa0435570 MtrunA17_Chr6g0463421 25.459 381 236 13 42 399 262 617 7.41e-21 97.1
Msa0435570 MtrunA17_Chr6g0463421 28.646 192 121 5 220 401 267 452 9.64e-16 80.9
Msa0435570 MtrunA17_Chr7g0253611 27.719 285 153 9 47 309 177 430 8.80e-20 93.6
Msa0435570 MtrunA17_Chr7g0253611 24.107 336 183 9 75 401 151 423 3.16e-15 79.3
Msa0435570 MtrunA17_Chr3g0109811 23.016 378 242 12 45 399 293 644 8.63e-19 90.5
Msa0435570 MtrunA17_Chr3g0109811 30.126 239 138 8 198 424 279 500 7.46e-17 84.3
Msa0435570 MtrunA17_Chr5g0415871 26.257 358 214 13 65 399 53 383 9.48e-19 88.6
Msa0435570 MtrunA17_Chr5g0415871 27.138 269 161 9 78 332 15 262 7.00e-14 73.6
Msa0435570 MtrunA17_Chr7g0220131 25.854 410 227 17 43 407 42 419 2.28e-16 81.6
Msa0435570 MtrunA17_Chr7g0220131 23.836 365 217 15 80 405 24 366 3.54e-12 68.6
Msa0435570 MtrunA17_Chr3g0140201 29.339 242 134 9 61 275 102 333 1.56e-15 79.3
Msa0435570 MtrunA17_Chr7g0239601 25.434 173 114 2 105 277 32 189 5.91e-15 73.9
Msa0435570 MtrunA17_Chr7g0239601 28.495 186 119 6 224 402 32 210 1.30e-14 73.2
Msa0435570 MtrunA17_Chr7g0239601 30.939 181 107 4 65 244 44 207 2.68e-14 72.0
Msa0435570 MtrunA17_Chr2g0317861 27.152 302 182 9 20 310 182 456 4.41e-14 74.7
Msa0435570 MtrunA17_Chr3g0130871 24.925 333 208 12 95 403 15 329 2.88e-12 68.2
Msa0435570 MtrunA17_Chr3g0130871 27.165 254 137 9 47 275 74 304 7.28e-12 67.0
Msa0435570 MtrunA17_Chr5g0404371 25.962 312 138 10 61 284 121 427 4.93e-12 68.2
Msa0435570 MtrunA17_Chr3g0112381 35.922 103 62 2 45 145 27 127 1.34e-11 63.2
Msa0435570 MtrunA17_Chr7g0233601 27.715 267 162 8 57 315 151 394 2.71e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0435570 AT1G19880.1 68.727 550 149 8 1 543 5 538 0.0 746
Msa0435570 AT5G63860.1 31.322 348 208 10 67 405 24 349 4.08e-34 134
Msa0435570 AT5G63860.1 27.972 286 183 5 30 314 94 357 9.15e-31 125
Msa0435570 AT5G63860.1 26.923 182 121 5 231 405 17 193 1.91e-12 69.7
Msa0435570 AT5G16040.1 27.545 334 212 11 82 405 10 323 2.90e-25 108
Msa0435570 AT5G16040.1 29.719 249 148 9 39 287 135 356 4.68e-20 92.8
Msa0435570 AT5G16040.1 27.704 379 212 16 56 401 38 387 2.44e-19 90.9
Msa0435570 AT5G16040.1 27.437 277 161 9 46 311 81 328 3.49e-19 90.1
Msa0435570 AT3G23270.2 27.273 374 221 13 43 392 242 588 1.61e-23 105
Msa0435570 AT3G23270.1 27.273 374 221 13 43 392 238 584 1.85e-23 105
Msa0435570 AT3G02510.1 25.581 387 254 11 82 457 10 373 4.48e-23 102
Msa0435570 AT3G02510.1 28.623 276 157 9 47 311 82 328 2.95e-20 93.6
Msa0435570 AT3G02510.1 28.042 378 210 16 57 401 39 387 1.28e-18 88.6
Msa0435570 AT5G11580.1 25.745 369 205 9 56 399 14 338 5.73e-23 103
Msa0435570 AT4G14368.4 26.738 374 223 14 43 392 257 603 5.74e-23 103
Msa0435570 AT4G14368.4 27.907 215 114 7 47 244 420 610 1.79e-12 70.9
Msa0435570 AT4G14368.3 26.738 374 223 14 43 392 250 596 6.14e-23 103
Msa0435570 AT4G14368.3 27.907 215 114 7 47 244 413 603 1.83e-12 70.9
Msa0435570 AT4G14368.2 26.738 374 223 14 43 392 255 601 7.09e-23 103
Msa0435570 AT4G14368.2 27.907 215 114 7 47 244 418 608 2.00e-12 70.9
Msa0435570 AT3G47660.3 26.902 368 228 12 47 399 287 628 1.01e-22 103
Msa0435570 AT3G47660.3 28.272 191 121 4 220 400 287 471 6.32e-15 78.6
Msa0435570 AT3G47660.5 26.902 368 228 12 47 399 287 628 1.01e-22 103
Msa0435570 AT3G47660.5 28.272 191 121 4 220 400 287 471 6.32e-15 78.6
Msa0435570 AT3G47660.1 26.902 368 228 12 47 399 290 631 1.12e-22 103
Msa0435570 AT3G47660.1 28.272 191 121 4 220 400 290 474 5.95e-15 78.6
Msa0435570 AT3G47660.2 26.902 368 228 12 47 399 290 631 1.17e-22 103
Msa0435570 AT3G47660.2 28.272 191 121 4 220 400 290 474 6.33e-15 78.6
Msa0435570 AT3G47660.7 26.902 368 228 12 47 399 145 486 1.60e-22 102
Msa0435570 AT3G47660.7 28.272 191 121 4 220 400 145 329 8.81e-15 78.2
Msa0435570 AT4G14368.1 26.738 374 223 14 43 392 257 603 1.88e-22 102
Msa0435570 AT4G14368.1 27.907 215 114 7 47 244 420 610 4.12e-12 69.7
Msa0435570 AT5G12350.1 25.469 373 235 11 47 399 299 648 2.66e-22 102
Msa0435570 AT5G12350.1 28.421 190 122 5 220 401 299 482 1.36e-16 84.0
Msa0435570 AT5G12350.1 28.372 215 115 6 58 256 465 656 1.05e-13 74.7
Msa0435570 AT3G47660.6 26.902 368 228 12 47 399 212 553 3.49e-22 101
Msa0435570 AT3G47660.6 28.272 191 121 4 220 400 212 396 1.25e-14 77.8
Msa0435570 AT3G47660.4 26.902 368 228 12 47 399 326 667 6.21e-22 100
Msa0435570 AT3G47660.4 28.272 191 121 4 220 400 326 510 1.72e-14 77.4
Msa0435570 AT5G16040.2 27.500 320 198 12 82 389 10 307 8.21e-22 97.4
Msa0435570 AT5G16040.2 28.400 250 143 8 46 284 81 305 8.19e-18 85.5
Msa0435570 AT5G60870.1 28.866 291 173 8 34 314 129 395 1.61e-21 97.8
Msa0435570 AT5G60870.1 25.862 348 183 11 75 405 46 335 5.25e-17 84.0
Msa0435570 AT5G60870.1 25.604 207 135 5 42 244 249 440 5.14e-12 68.6
Msa0435570 AT3G03790.1 27.056 377 204 13 47 399 174 503 2.41e-21 99.0
Msa0435570 AT3G03790.1 29.293 198 121 6 216 399 170 362 1.04e-13 74.7
Msa0435570 AT3G03790.1 26.971 241 147 7 79 310 152 372 2.11e-11 67.4
Msa0435570 AT3G03790.2 27.056 377 204 13 47 399 177 506 2.63e-21 99.0
Msa0435570 AT3G03790.2 29.293 198 121 6 216 399 173 365 9.91e-14 74.7
Msa0435570 AT3G03790.2 26.939 245 150 7 75 310 151 375 1.53e-11 67.8
Msa0435570 AT5G19420.1 25.201 373 236 11 47 399 303 652 2.68e-21 99.0
Msa0435570 AT5G19420.1 28.421 190 122 5 220 401 303 486 1.56e-16 84.0
Msa0435570 AT3G02510.3 31.660 259 143 12 31 287 72 298 2.87e-21 95.5
Msa0435570 AT3G02510.3 28.623 276 157 9 47 311 24 270 1.10e-20 94.0
Msa0435570 AT3G02510.3 27.606 355 197 15 80 401 2 329 5.38e-17 82.8
Msa0435570 AT3G02510.3 26.113 337 215 12 132 457 2 315 1.52e-14 75.5
Msa0435570 AT3G02510.3 29.592 196 123 6 57 244 139 327 3.10e-14 74.7
Msa0435570 AT5G19420.2 25.201 373 236 11 47 399 337 686 3.71e-21 98.6
Msa0435570 AT5G19420.2 28.421 190 122 5 220 401 337 520 1.86e-16 83.6
Msa0435570 AT3G03790.3 27.056 377 204 13 47 399 177 506 4.13e-21 98.2
Msa0435570 AT3G03790.3 29.293 198 121 6 216 399 173 365 1.47e-13 74.3
Msa0435570 AT3G03790.3 26.939 245 150 7 75 310 151 375 1.90e-11 67.4
Msa0435570 AT3G26100.5 30.182 275 153 10 56 310 129 384 8.31e-21 96.3
Msa0435570 AT3G26100.5 24.737 380 198 12 50 380 189 529 7.88e-15 77.8
Msa0435570 AT3G26100.6 30.182 275 153 10 56 310 129 384 8.31e-21 96.3
Msa0435570 AT3G26100.6 24.737 380 198 12 50 380 189 529 7.88e-15 77.8
Msa0435570 AT3G26100.2 30.182 275 153 10 56 310 129 384 8.31e-21 96.3
Msa0435570 AT3G26100.2 24.737 380 198 12 50 380 189 529 7.88e-15 77.8
Msa0435570 AT3G26100.3 30.182 275 153 10 56 310 29 284 8.36e-21 95.5
Msa0435570 AT3G26100.3 24.737 380 198 12 50 380 89 429 6.20e-15 77.4
Msa0435570 AT3G26100.4 30.182 275 153 10 56 310 29 284 8.36e-21 95.5
Msa0435570 AT3G26100.4 24.737 380 198 12 50 380 89 429 6.20e-15 77.4
Msa0435570 AT3G26100.1 30.182 275 153 10 56 310 29 284 8.36e-21 95.5
Msa0435570 AT3G26100.1 24.737 380 198 12 50 380 89 429 6.20e-15 77.4
Msa0435570 AT5G19420.3 25.410 366 230 11 47 392 303 645 1.54e-20 96.3
Msa0435570 AT5G19420.3 28.421 190 122 5 220 401 303 486 4.13e-16 82.4
Msa0435570 AT5G19420.3 30.814 172 96 4 77 244 500 652 3.49e-13 73.2
Msa0435570 AT5G42140.2 25.401 374 229 14 43 392 264 611 4.33e-20 95.1
Msa0435570 AT5G42140.2 25.000 192 128 5 220 401 268 453 1.55e-13 74.3
Msa0435570 AT5G42140.2 27.273 242 133 8 20 244 403 618 6.18e-12 68.9
Msa0435570 AT5G42140.1 25.401 374 229 14 43 392 264 611 4.33e-20 95.1
Msa0435570 AT5G42140.1 25.000 192 128 5 220 401 268 453 1.55e-13 74.3
Msa0435570 AT5G42140.1 27.273 242 133 8 20 244 403 618 6.18e-12 68.9
Msa0435570 AT5G60870.2 28.956 297 172 9 34 314 129 402 4.59e-20 93.6
Msa0435570 AT5G60870.2 25.862 348 183 11 75 405 46 335 8.76e-17 83.6
Msa0435570 AT3G02510.2 26.498 317 205 9 82 389 10 307 4.70e-20 91.7
Msa0435570 AT3G02510.2 29.719 249 139 8 47 284 82 305 2.45e-19 89.4
Msa0435570 AT1G76950.1 26.053 380 235 11 43 399 268 624 1.43e-19 93.6
Msa0435570 AT1G76950.1 26.562 192 126 5 220 401 272 458 3.27e-15 79.7
Msa0435570 AT1G69710.2 26.615 387 216 15 47 399 278 630 1.05e-18 90.5
Msa0435570 AT1G69710.2 27.848 237 147 6 198 424 263 485 5.55e-11 65.9
Msa0435570 AT1G69710.1 26.615 387 216 15 47 399 291 643 1.26e-18 90.5
Msa0435570 AT1G69710.1 27.848 237 147 6 198 424 276 498 6.02e-11 65.9
Msa0435570 AT3G55580.1 27.626 257 146 6 48 277 222 465 2.38e-17 85.5
Msa0435570 AT3G55580.1 28.452 239 121 7 101 310 225 442 2.45e-12 69.7
Msa0435570 AT1G65920.2 23.969 388 246 10 41 406 231 591 2.61e-17 86.3
Msa0435570 AT1G27060.1 30.392 204 125 5 57 259 49 236 3.38e-17 84.0
Msa0435570 AT1G27060.1 26.100 341 209 10 78 405 16 326 1.09e-13 73.6
Msa0435570 AT1G65920.1 23.969 388 246 10 41 406 277 637 3.45e-17 85.9
Msa0435570 AT3G15430.6 27.007 274 171 7 44 310 204 455 3.78e-17 84.7
Msa0435570 AT3G15430.6 26.284 331 181 8 77 405 182 451 3.17e-15 79.0
Msa0435570 AT3G15430.4 27.007 274 171 7 44 310 204 455 3.78e-17 84.7
Msa0435570 AT3G15430.4 26.284 331 181 8 77 405 182 451 3.17e-15 79.0
Msa0435570 AT3G15430.2 27.007 274 171 7 44 310 204 455 3.78e-17 84.7
Msa0435570 AT3G15430.2 26.284 331 181 8 77 405 182 451 3.17e-15 79.0
Msa0435570 AT3G15430.3 27.007 274 171 7 44 310 204 455 3.78e-17 84.7
Msa0435570 AT3G15430.3 26.284 331 181 8 77 405 182 451 3.17e-15 79.0
Msa0435570 AT3G15430.5 27.007 274 171 7 44 310 204 455 3.78e-17 84.7
Msa0435570 AT3G15430.5 26.284 331 181 8 77 405 182 451 3.17e-15 79.0
Msa0435570 AT3G15430.1 27.007 274 171 7 44 310 204 455 3.78e-17 84.7
Msa0435570 AT3G15430.1 26.284 331 181 8 77 405 182 451 3.17e-15 79.0
Msa0435570 AT5G60870.4 25.862 348 183 11 75 405 46 335 5.74e-17 83.6
Msa0435570 AT5G60870.4 28.070 285 172 8 34 308 129 390 9.81e-17 82.8
Msa0435570 AT3G02300.2 24.528 371 225 13 71 405 25 376 1.13e-16 83.2
Msa0435570 AT3G02300.2 26.303 403 238 16 41 407 50 429 1.82e-15 79.3
Msa0435570 AT3G02300.1 24.528 371 225 13 71 405 14 365 1.18e-16 83.2
Msa0435570 AT3G02300.1 26.303 403 238 16 41 407 39 418 1.73e-15 79.3
Msa0435570 AT5G08710.1 26.154 390 238 14 42 402 65 433 8.51e-16 80.1
Msa0435570 AT5G60870.3 26.695 236 142 6 88 314 13 226 2.41e-15 77.0
Msa0435570 AT5G60870.3 25.604 207 135 5 42 244 80 271 1.68e-12 68.6
Msa0435570 AT3G53830.3 33.158 190 106 5 59 244 295 467 4.19e-15 78.2
Msa0435570 AT3G53830.3 25.070 359 175 13 45 401 203 469 4.23e-15 78.2
Msa0435570 AT3G53830.4 32.632 190 107 4 59 244 323 495 5.79e-15 78.2
Msa0435570 AT3G53830.4 25.140 358 174 13 46 401 232 497 8.04e-15 77.4
Msa0435570 AT5G48330.2 24.324 370 232 13 69 400 93 452 3.28e-12 69.3
Msa0435570 AT5G08710.2 33.051 236 138 7 82 311 54 275 8.09e-12 67.0
Msa0435570 AT3G53830.1 26.724 232 128 7 46 276 204 394 9.53e-12 67.4
Msa0435570 AT5G48330.1 23.989 371 233 13 69 400 93 453 9.57e-12 67.8
Msa0435570 AT3G53830.2 26.724 232 128 7 46 276 232 422 1.28e-11 67.4

Find 193 sgRNAs with CRISPR-Local

Find 509 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAACTAAGTCATGACTTTC+TGG 0.129930 3_2:-88759009 None:intergenic
CTAAGCCTCTAATGGATTTA+AGG 0.137896 3_2:+88755799 Msa0435570:CDS
AACAGTGTTGCTTGTGGTTT+GGG 0.263671 3_2:+88756899 Msa0435570:intron
TAATTTCACAGAACTGTCTT+TGG 0.265905 3_2:-88754518 None:intergenic
AATATACGATGCATGGATTC+AGG 0.280176 3_2:+88755953 Msa0435570:CDS
CTCAAGTATATCCACCTTCT+TGG 0.292087 3_2:-88756157 None:intergenic
CATAACCTTAAATCCATTAG+AGG 0.299264 3_2:-88755804 None:intergenic
CGAGCAATAGCTTCCCTTGC+TGG 0.299714 3_2:+88754565 Msa0435570:CDS
AAACAAGAGTTCACCTCCTT+TGG 0.302920 3_2:-88752402 None:intergenic
CCGACACAAGACAGCGAATA+GGG 0.309068 3_2:-88753485 None:intergenic
CTTAAATCCATTAGAGGCTT+AGG 0.314409 3_2:-88755798 None:intergenic
TTAGAACTGCTGTTATTTGC+AGG 0.316206 3_2:-88758948 None:intergenic
AGGTCACCAGCCGCTGATTA+AGG 0.316326 3_2:-88759207 None:intergenic
TAAAACTCAAGTGCCTAAAA+AGG 0.316886 3_2:+88758674 Msa0435570:CDS
ACTGCTGGGCTTCCACAGTA+TGG 0.317692 3_2:+88753702 Msa0435570:CDS
TTCCACAGTATGGGCAGCTT+GGG 0.334508 3_2:+88753712 Msa0435570:CDS
ATGAGAGGAGAGAAGGAGAT+TGG 0.334653 3_2:-88752188 None:intergenic
AAACAGTGTTGCTTGTGGTT+TGG 0.350838 3_2:+88756898 Msa0435570:intron
CTTCCACAGTATGGGCAGCT+TGG 0.357567 3_2:+88753711 Msa0435570:CDS
CCGCTGATTAAGGTTCTATT+AGG 0.370665 3_2:-88759197 None:intergenic
AGGTCCTGCCGAGGGTAATT+TGG 0.372205 3_2:+88752463 Msa0435570:CDS
TGATTCCTCGTGCATAAGTT+GGG 0.374540 3_2:+88756000 Msa0435570:CDS
TGTTGTGCAGAAAGGGCAAC+TGG 0.376822 3_2:+88752830 Msa0435570:intron
GATGGAAATTCCCTAGCATT+TGG 0.384805 3_2:+88753145 Msa0435570:CDS
AGGAATCAGCCCCAACAAAA+TGG 0.390112 3_2:-88755985 None:intergenic
AGGTGGGGTTATGGTGGTTA+TGG 0.398844 3_2:+88754822 Msa0435570:intron
ATTATGATTGCTAGGACTGC+TGG 0.399237 3_2:+88753687 Msa0435570:intron
GTGAATTCTGCTTGTACTGC+AGG 0.412241 3_2:+88755084 Msa0435570:CDS
GAGATACCATTCAGCGTGAT+AGG 0.414029 3_2:+88752859 Msa0435570:CDS
AATAGCGAGGATGAAGTTAA+TGG 0.414274 3_2:+88758810 Msa0435570:CDS
CATGTGTACAGGTGGGGTTA+TGG 0.421071 3_2:+88754813 Msa0435570:intron
GATGTACCCTAAGCCTCTAA+TGG 0.423368 3_2:+88755791 Msa0435570:CDS
CTGATTCCTCGTGCATAAGT+TGG 0.424200 3_2:+88755999 Msa0435570:CDS
AACAAGAGTTCACCTCCTTT+GGG 0.425944 3_2:-88752401 None:intergenic
AATTCTGTAGGCTAGGACAT+CGG 0.429206 3_2:+88754971 Msa0435570:intron
ATTCTGTAGGCTAGGACATC+GGG 0.434303 3_2:+88754972 Msa0435570:intron
CCTCTGTAACAACTACAGTA+TGG 0.436175 3_2:-88753123 None:intergenic
TACACATACTTCTGTCCATT+AGG 0.440187 3_2:-88756055 None:intergenic
AAAATTGTTCAAGCTGGAGC+TGG 0.440882 3_2:+88753094 Msa0435570:CDS
TAAAGAACACCGGTGATGAC+TGG 0.444787 3_2:+88755769 Msa0435570:CDS
TTCTGGCAAGGGCCGGGGTA+AGG 0.449517 3_2:+88758869 Msa0435570:CDS
TATTGCTGATAGACTTGATC+AGG 0.451116 3_2:+88756952 Msa0435570:CDS
CTCTTACCAGTTGACTTCAC+TGG 0.451296 3_2:-88758978 None:intergenic
CCTGATGCAATTATTTCAGC+AGG 0.451970 3_2:+88755057 Msa0435570:CDS
ATGAAGTGAAGAGGGTGTTA+AGG 0.456364 3_2:-88752225 None:intergenic
AATTGCAATTAATAGTTAGC+TGG 0.460870 3_2:-88759067 None:intergenic
TTGAAGGGCGTTGCTATACA+TGG 0.462322 3_2:+88752716 Msa0435570:CDS
AAACTAAGTCATGACTTTCT+GGG 0.463390 3_2:-88759008 None:intergenic
TCTTCTCCAGTGAAGTCAAC+TGG 0.463789 3_2:+88758972 Msa0435570:CDS
GGGGTTATGGTGGTTATGGA+AGG 0.464165 3_2:+88754826 Msa0435570:CDS
TCAAGTATATCCACCTTCTT+GGG 0.467755 3_2:-88756156 None:intergenic
TGAAGAGGGTGTTAAGGAAA+TGG 0.468015 3_2:-88752219 None:intergenic
GAGCTGGGATACGGACCTAA+TGG 0.470385 3_2:+88756040 Msa0435570:CDS
GCCGACGAGAGGACGGAGGC+GGG 0.472359 3_2:-88752495 None:intergenic
GAGTCTGAGGGTAAAGGCTC+TGG 0.474002 3_2:+88758906 Msa0435570:CDS
TTAAATCCATTAGAGGCTTA+GGG 0.474350 3_2:-88755797 None:intergenic
GATGAGAAATGAAGTGAAGA+GGG 0.474646 3_2:-88752233 None:intergenic
AAAGGCTCTGGCCGAGGACG+TGG 0.475426 3_2:+88758918 Msa0435570:CDS
TGCCGACGAGAGGACGGAGG+CGG 0.476627 3_2:-88752496 None:intergenic
CTGGAGGGCAGCTGTATATG+TGG 0.476947 3_2:+88755739 Msa0435570:CDS
TTGTGGTTTGGGTCATTCCA+TGG 0.477559 3_2:+88756910 Msa0435570:CDS
ACCCTCAGACTCCGACACTT+TGG 0.484222 3_2:-88758895 None:intergenic
TGCGTGGCATTGGACGTTGA+AGG 0.485102 3_2:+88752700 Msa0435570:CDS
TTTGGGTCATTCCATGGTTG+TGG 0.487755 3_2:+88756916 Msa0435570:CDS
GTCTTCAGCTGTTCCCAAGA+AGG 0.489874 3_2:+88756143 Msa0435570:CDS
TCCGACACAAGACAGCGAAT+AGG 0.491538 3_2:-88753486 None:intergenic
AGATACAAAATTGTTCAAGC+TGG 0.495929 3_2:+88753088 Msa0435570:intron
TTCGTGTCATTGCGTGGCAT+TGG 0.496071 3_2:+88752690 Msa0435570:CDS
TCATGCTCAGAATGGAGAGC+TGG 0.497285 3_2:+88756024 Msa0435570:CDS
CCTGCTGAAATAATTGCATC+AGG 0.498802 3_2:-88755057 None:intergenic
GTTTGTTCCATCCAAATGCT+AGG 0.499233 3_2:-88753156 None:intergenic
ACTGTAGTTGTTACAGAGGA+TGG 0.504285 3_2:+88753127 Msa0435570:CDS
AAAAGTTCTGGCAAGGGCCG+GGG 0.506111 3_2:+88758864 Msa0435570:CDS
ACGGATCTAACGGCTAGTAT+TGG 0.506979 3_2:-88752259 None:intergenic
ATATACGATGCATGGATTCA+GGG 0.509327 3_2:+88755954 Msa0435570:CDS
CAGTATGGGCAGCTTGGGCA+TGG 0.510523 3_2:+88753717 Msa0435570:CDS
GCGTGGCATTGGACGTTGAA+GGG 0.510601 3_2:+88752701 Msa0435570:CDS
GGGAAAGATGAGAGGAGAGA+AGG 0.512060 3_2:-88752195 None:intergenic
CGATACGTTGCATCGGGCTG+CGG 0.513309 3_2:+88752527 Msa0435570:CDS
TTAATCAGCGGCTGGTGACC+TGG 0.514638 3_2:+88759209 Msa0435570:three_prime_UTR
TTCTCAAACAGTGTTGCTTG+TGG 0.516140 3_2:+88756893 Msa0435570:intron
TTAAGGTTCTATTAGGCTGA+TGG 0.516173 3_2:-88759190 None:intergenic
TTATGATTGCTAGGACTGCT+GGG 0.519649 3_2:+88753688 Msa0435570:intron
CAGAATGGAGAGCTGGGATA+CGG 0.520391 3_2:+88756031 Msa0435570:CDS
CTGCAGCTTGATACACATGA+TGG 0.522680 3_2:+88758200 Msa0435570:intron
GAGCAATAGCTTCCCTTGCT+GGG 0.523599 3_2:+88754566 Msa0435570:CDS
AGCATTCGATACGTTGCATC+GGG 0.523617 3_2:+88752521 Msa0435570:CDS
ACGAGAGGACGGAGGCGGGA+AGG 0.524041 3_2:-88752491 None:intergenic
AGTTGGCCTATCACGCTGAA+TGG 0.524912 3_2:-88752865 None:intergenic
GAAGCTATTGCTCGAGGACG+TGG 0.526893 3_2:-88754556 None:intergenic
GAAATTCCCTAGCATTTGGA+TGG 0.527337 3_2:+88753149 Msa0435570:CDS
TGAAGTTAATGGTGAGGCTG+AGG 0.529067 3_2:+88758821 Msa0435570:CDS
CCCTATTCGCTGTCTTGTGT+CGG 0.529834 3_2:+88753485 Msa0435570:CDS
GACAATGGTTTCCCCAGCAA+GGG 0.529979 3_2:-88754578 None:intergenic
CAGAAAGGGCAACTGGGTCA+TGG 0.531028 3_2:+88752837 Msa0435570:intron
TGCTGATGCCGACGAGAGGA+CGG 0.531162 3_2:-88752502 None:intergenic
GAGGGTAAAGGCTCTGGCCG+AGG 0.531410 3_2:+88758912 Msa0435570:CDS
GTGTCGGAGTCTGAGGGTAA+AGG 0.532240 3_2:+88758900 Msa0435570:CDS
TACATCAGAAGTTGAGAAGA+AGG 0.535425 3_2:+88752358 Msa0435570:CDS
GGCTGATGGAAAACTGAAGA+AGG 0.537426 3_2:-88759176 None:intergenic
AAGAAGGTGGATATACTTGA+GGG 0.539093 3_2:+88756159 Msa0435570:CDS
CAGGAGCGCGACCACGTCCT+CGG 0.540964 3_2:-88758929 None:intergenic
CTGCTGGGCTTCCACAGTAT+GGG 0.542164 3_2:+88753703 Msa0435570:CDS
ATCCAAAGTGTCGGAGTCTG+AGG 0.546995 3_2:+88758893 Msa0435570:CDS
AGATGAGAAATGAAGTGAAG+AGG 0.548620 3_2:-88752234 None:intergenic
GAGACCAAATTACCCTCGGC+AGG 0.551043 3_2:-88752467 None:intergenic
GCTAGGACATCGGGAGCAGA+AGG 0.552867 3_2:+88754981 Msa0435570:CDS
TTTGTTCCATCCAAATGCTA+GGG 0.553881 3_2:-88753155 None:intergenic
AGTTGGGGTCATGCTCAGAA+TGG 0.554049 3_2:+88756016 Msa0435570:CDS
GAGGGTGTTAAGGAAATGGC+GGG 0.554499 3_2:-88752215 None:intergenic
CAAGAAGGTGGATATACTTG+AGG 0.555096 3_2:+88756158 Msa0435570:CDS
ATAGAACCTTAATCAGCGGC+TGG 0.555756 3_2:+88759201 Msa0435570:three_prime_UTR
CGGTTGGAATATACGATGCA+TGG 0.556512 3_2:+88755946 Msa0435570:CDS
TGACAATGGTTTCCCCAGCA+AGG 0.558824 3_2:-88754579 None:intergenic
GCATGTGGAACAAATCATAC+AGG 0.562044 3_2:+88754607 Msa0435570:CDS
GTGTACAGGTGGGGTTATGG+TGG 0.562157 3_2:+88754816 Msa0435570:intron
CTCAGAAGAAGAGCAAGAAG+AGG 0.566436 3_2:+88758773 Msa0435570:CDS
TGGAACAAACATGGACAGCT+AGG 0.566459 3_2:+88753169 Msa0435570:CDS
GAAAGTTCAGAAACCACAGT+TGG 0.572182 3_2:-88752882 None:intergenic
TGGAGGGCAGCTGTATATGT+GGG 0.572789 3_2:+88755740 Msa0435570:CDS
GTGAAGTCAACTGGTAAGAG+AGG 0.577873 3_2:+88758981 Msa0435570:CDS
AAATTGTTCAAGCTGGAGCT+GGG 0.578150 3_2:+88753095 Msa0435570:CDS
ACACTTTGGATGCCTTACCC+CGG 0.579617 3_2:-88758881 None:intergenic
GATATCGTTGGTCGTCGCAA+AGG 0.579977 3_2:+88752443 Msa0435570:CDS
CATGCTCAGAATGGAGAGCT+GGG 0.581451 3_2:+88756025 Msa0435570:CDS
ACCATTGTCAAGGTGGCATG+TGG 0.582156 3_2:+88754592 Msa0435570:CDS
AAACATGGACAGCTAGGTTC+CGG 0.582193 3_2:+88753175 Msa0435570:CDS
TGTGAAAATGACGGATCTAA+CGG 0.582429 3_2:-88752269 None:intergenic
TCCCGCCTCCGTCCTCTCGT+CGG 0.582568 3_2:+88752494 Msa0435570:CDS
TGAAGGGCGTTGCTATACAT+GGG 0.582917 3_2:+88752717 Msa0435570:CDS
AAGCTGACAGCTCAAAGAAG+AGG 0.584051 3_2:+88758727 Msa0435570:CDS
TCCACATGCCACCTTGACAA+TGG 0.585101 3_2:-88754593 None:intergenic
TGCTGGGGAAACCATTGTCA+AGG 0.586213 3_2:+88754582 Msa0435570:CDS
TCGTCGCAAAGGTCCTGCCG+AGG 0.586450 3_2:+88752454 Msa0435570:CDS
CGAATGCTGATGCCGACGAG+AGG 0.587089 3_2:-88752506 None:intergenic
AGAAGTTGAGAAGAAGGTCG+AGG 0.591344 3_2:+88752364 Msa0435570:CDS
AGGGTACATCCAGTCATCAC+CGG 0.591794 3_2:-88755778 None:intergenic
CAGCATTCGATACGTTGCAT+CGG 0.592841 3_2:+88752520 Msa0435570:CDS
GAAGGGCGTTGCTATACATG+GGG 0.593326 3_2:+88752718 Msa0435570:CDS
GAAATGGCGGGAAAGATGAG+AGG 0.594991 3_2:-88752203 None:intergenic
TATACGATGCATGGATTCAG+GGG 0.595200 3_2:+88755955 Msa0435570:CDS
AGACATTTCACCGTTCACTC+CGG 0.598445 3_2:-88752336 None:intergenic
AGAGGGTGTTAAGGAAATGG+CGG 0.600012 3_2:-88752216 None:intergenic
GTGTGGCTATCTTCAGTCGA+AGG 0.600472 3_2:+88753543 Msa0435570:CDS
GAGAATCAAGCTCCCAAAGG+AGG 0.604298 3_2:+88752389 Msa0435570:CDS
TTTCGTTGCAACTCAAAATG+CGG 0.610173 3_2:+88759043 Msa0435570:three_prime_UTR
CGTCGCAAAGGTCCTGCCGA+GGG 0.610410 3_2:+88752455 Msa0435570:CDS
TTCATCAATAACATCTCACC+AGG 0.612461 3_2:-88759227 None:intergenic
TTCAGCTGTTCCCAAGAAGG+TGG 0.612636 3_2:+88756146 Msa0435570:CDS
GTTACTCTCGCCGGAGTGAA+CGG 0.612669 3_2:+88752326 Msa0435570:five_prime_UTR
GCCACGTGCTGGGATATCGT+TGG 0.616073 3_2:+88752431 Msa0435570:CDS
CGACACAAGACAGCGAATAG+GGG 0.616819 3_2:-88753484 None:intergenic
GTTCACTCCGGCGAGAGTAA+CGG 0.618782 3_2:-88752324 None:intergenic
GATTCCTCGTGCATAAGTTG+GGG 0.619534 3_2:+88756001 Msa0435570:CDS
TTGAGGGTATGCATGTAATG+AGG 0.620851 3_2:+88756175 Msa0435570:CDS
TGCTCTGTCAACCACAACCA+TGG 0.623155 3_2:-88756927 None:intergenic
CGAGGATGAAGTTAATGGTG+AGG 0.626334 3_2:+88758815 Msa0435570:CDS
AGGAGAGACCAAATTACCCT+CGG 0.628341 3_2:-88752471 None:intergenic
GCAAGGGAAGCTATTGCTCG+AGG 0.628727 3_2:-88754562 None:intergenic
GGGTAAGGCATCCAAAGTGT+CGG 0.631380 3_2:+88758884 Msa0435570:CDS
GCAGTGGCGGTGGATAAGAA+TGG 0.633901 3_2:+88754702 Msa0435570:intron
TGCCCAAGCTGCCCATACTG+TGG 0.634362 3_2:-88753714 None:intergenic
TGCAGCTTCGTGTCATTGCG+TGG 0.634876 3_2:+88752684 Msa0435570:intron
GTTGTGCAGAAAGGGCAACT+GGG 0.636990 3_2:+88752831 Msa0435570:intron
ACACATGATGGCAAAGCTGT+TGG 0.637999 3_2:+88758212 Msa0435570:CDS
TCCAAAGTGTCGGAGTCTGA+GGG 0.639192 3_2:+88758894 Msa0435570:CDS
GCATTTGGATGGAACAAACA+TGG 0.639496 3_2:+88753160 Msa0435570:CDS
AGCAATAGCTTCCCTTGCTG+GGG 0.642390 3_2:+88754567 Msa0435570:CDS
GATGGCAAAGCTGTTGGTGA+AGG 0.646025 3_2:+88758218 Msa0435570:CDS
GAAGAGAATCAAGCTCCCAA+AGG 0.653323 3_2:+88752386 Msa0435570:CDS
CCATACTGTAGTTGTTACAG+AGG 0.653376 3_2:+88753123 Msa0435570:CDS
CCTAATAGAACCTTAATCAG+CGG 0.662077 3_2:+88759197 Msa0435570:three_prime_UTR
GAAGTTACATATGCTACATG+TGG 0.662656 3_2:+88753507 Msa0435570:CDS
GTTACATATGCTACATGTGG+TGG 0.668990 3_2:+88753510 Msa0435570:CDS
TGGGGAAACCATTGTCAAGG+TGG 0.671803 3_2:+88754585 Msa0435570:CDS
TCAGCGTGATAGGCCAACTG+TGG 0.672141 3_2:+88752869 Msa0435570:CDS
GCTGAAATAATTGCATCAGG+AGG 0.676604 3_2:-88755054 None:intergenic
GGAGGGCAGCTGTATATGTG+GGG 0.682771 3_2:+88755741 Msa0435570:CDS
TGGGGCAAAATAAAGAACAC+CGG 0.685495 3_2:+88755759 Msa0435570:CDS
TGAAGAAAGTGACAATAGCG+AGG 0.689085 3_2:+88758797 Msa0435570:CDS
TGATGCCGACGAGAGGACGG+AGG 0.696844 3_2:-88752499 None:intergenic
GAGGTTAAAACATCACGTGG+TGG 0.705714 3_2:+88758840 Msa0435570:CDS
TATTCGTGAAAATATCAACA+CGG 0.705910 3_2:-88755020 None:intergenic
GTGAAAATATCAACACGGCG+TGG 0.706015 3_2:-88755015 None:intergenic
ATACGATGCATGGATTCAGG+GGG 0.708960 3_2:+88755956 Msa0435570:CDS
GCTGAGGTTAAAACATCACG+TGG 0.716701 3_2:+88758837 Msa0435570:CDS
GATGTTATTGATGAAACTTG+AGG 0.723067 3_2:+88759235 Msa0435570:three_prime_UTR
ACCAACGATATCCCAGCACG+TGG 0.723780 3_2:-88752432 None:intergenic
ATGACCCCAACTTATGCACG+AGG 0.724767 3_2:-88756005 None:intergenic
GATACTACTACAGTGAGGTG+CGG 0.727168 3_2:-88752156 None:intergenic
AAGGGCGTTGCTATACATGG+GGG 0.736643 3_2:+88752719 Msa0435570:CDS
TGGGCATGGAACAGATAACG+AGG 0.759223 3_2:+88753731 Msa0435570:CDS
GCGCAGATACTACTACAGTG+AGG 0.793093 3_2:-88752161 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTATAAAAAAAAA+AGG - chr3_2:88754953-88754972 None:intergenic 0.0%
!!! TAGTTTTAGATATATATTAT+TGG + chr3_2:88754054-88754073 Msa0435570:intron 10.0%
!! TATAGAAAACAAAAATAATA+AGG - chr3_2:88754681-88754700 None:intergenic 10.0%
!! TTTATAAAAAAAAATTCTGT+AGG + chr3_2:88754959-88754978 Msa0435570:intron 10.0%
!!! TCTTTTTAAAAAGAAAAATT+GGG + chr3_2:88755397-88755416 Msa0435570:intron 10.0%
!!! GAAATTTTTATTAATTTAAG+TGG + chr3_2:88755426-88755445 Msa0435570:intron 10.0%
!! AAATATATAATACTTTAATC+AGG - chr3_2:88755912-88755931 None:intergenic 10.0%
!! TTATATACACTTTATAAAAT+TGG - chr3_2:88756522-88756541 None:intergenic 10.0%
!! TTAGAAAGAAAAATTGAATT+AGG + chr3_2:88752118-88752137 Msa0435570:five_prime_UTR 15.0%
!! TAGAAAGAAAAATTGAATTA+GGG + chr3_2:88752119-88752138 Msa0435570:five_prime_UTR 15.0%
!! AAAAAAATATGTGAAAATGA+CGG - chr3_2:88752281-88752300 None:intergenic 15.0%
!! AGAAACAATAACAATATATA+TGG - chr3_2:88753389-88753408 None:intergenic 15.0%
!!! TTTTTTAAATTATGATTGCT+AGG + chr3_2:88753679-88753698 Msa0435570:intron 15.0%
!! AAATTACAAAACAATCAATT+AGG + chr3_2:88754109-88754128 Msa0435570:intron 15.0%
!! GATAATATGCTTAAATATAA+AGG + chr3_2:88754315-88754334 Msa0435570:intron 15.0%
!! TTATAAAAAAAAAAGGTAGT+TGG - chr3_2:88754946-88754965 None:intergenic 15.0%
!!! CTCTTTTTAAAAAGAAAAAT+TGG + chr3_2:88755396-88755415 Msa0435570:intron 15.0%
!! GGTAAAAATTTATATGTAAA+AGG - chr3_2:88755625-88755644 None:intergenic 15.0%
!! TAATAATGAAAAGTTATTAG+TGG + chr3_2:88757960-88757979 Msa0435570:intron 15.0%
!! AATAATGAAAAGTTATTAGT+GGG + chr3_2:88757961-88757980 Msa0435570:intron 15.0%
!!! TATTTTTCTTTTACAAGTTA+AGG + chr3_2:88758424-88758443 Msa0435570:intron 15.0%
!! AAAAATTAAAACAACAGAAT+GGG - chr3_2:88759261-88759280 None:intergenic 15.0%
!! AAAAAATTAAAACAACAGAA+TGG - chr3_2:88759262-88759281 None:intergenic 15.0%
!!! TGTTTGTGTTTTCAATTTTA+TGG + chr3_2:88752995-88753014 Msa0435570:intron 20.0%
!! TGACAAGAAATAATAACAAA+AGG - chr3_2:88753039-88753058 None:intergenic 20.0%
!! ACAGATTATTCTGTAAAATT+AGG + chr3_2:88753221-88753240 Msa0435570:intron 20.0%
!! CATTATTCAAATTCAAACAT+GGG - chr3_2:88753915-88753934 None:intergenic 20.0%
!! ACATTATTCAAATTCAAACA+TGG - chr3_2:88753916-88753935 None:intergenic 20.0%
!! TAGATATATATTATTGGACA+AGG + chr3_2:88754060-88754079 Msa0435570:intron 20.0%
!!! GCATGAACATATATTTTTTA+TGG - chr3_2:88754216-88754235 None:intergenic 20.0%
!! ATACAAACATGTATTATCAT+GGG - chr3_2:88754442-88754461 None:intergenic 20.0%
!! ATAAGGAATAGTAATATACA+AGG - chr3_2:88754664-88754683 None:intergenic 20.0%
!! TTTAAAAAGAAAAATTGGGA+AGG + chr3_2:88755401-88755420 Msa0435570:intron 20.0%
!! TTAAAAAGAAAAATTGGGAA+GGG + chr3_2:88755402-88755421 Msa0435570:intron 20.0%
!! ATGAATTATTATTCAAACCA+TGG - chr3_2:88755837-88755856 None:intergenic 20.0%
!!! ATATTTATTTTGGTAAACAG+CGG + chr3_2:88755926-88755945 Msa0435570:intron 20.0%
!! AATGTAGAAATTGAATCTAT+TGG + chr3_2:88756329-88756348 Msa0435570:intron 20.0%
!! ATGTAGAAATTGAATCTATT+GGG + chr3_2:88756330-88756349 Msa0435570:intron 20.0%
!!! TTTTTTATATAACAATGGAC+TGG + chr3_2:88756545-88756564 Msa0435570:intron 20.0%
!!! CATGATTTTGAAAATTTAGT+GGG + chr3_2:88756568-88756587 Msa0435570:intron 20.0%
!!! ATGATTTTGAAAATTTAGTG+GGG + chr3_2:88756569-88756588 Msa0435570:intron 20.0%
!!! GATAAGTAGTTGTTTATTTT+TGG - chr3_2:88756774-88756793 None:intergenic 20.0%
!!! ATTGTCTGATATTATGTTTT+AGG + chr3_2:88757051-88757070 Msa0435570:intron 20.0%
!! CTATTGGATAAGAAATAATA+GGG + chr3_2:88757811-88757830 Msa0435570:intron 20.0%
!! TCTATCTCTTGAATAAATTT+GGG + chr3_2:88757869-88757888 Msa0435570:intron 20.0%
!!! TTTTTAAGAGTATGTTTCAA+TGG + chr3_2:88758380-88758399 Msa0435570:intron 20.0%
!!! TGTTAATTTGTGTTTTTTGA+GGG - chr3_2:88758588-88758607 None:intergenic 20.0%
!!! TTTAAATTGTAACCCTTTTT+TGG + chr3_2:88759109-88759128 Msa0435570:three_prime_UTR 20.0%
!! TAACGGTCAAAAAGTTATTT+TGG - chr3_2:88752310-88752329 None:intergenic 25.0%
!! TAGGCTATGTTTCATTTTAA+TGG + chr3_2:88753240-88753259 Msa0435570:intron 25.0%
!! GGTTTCTGAAAATTGTATTA+AGG + chr3_2:88753582-88753601 Msa0435570:intron 25.0%
! AATAATGTTATCCATTGTTG+AGG + chr3_2:88753928-88753947 Msa0435570:intron 25.0%
! ATATATATTATTGGACAAGG+AGG + chr3_2:88754063-88754082 Msa0435570:intron 25.0%
! TGAAATAAACTCATTCTACA+AGG - chr3_2:88754291-88754310 None:intergenic 25.0%
! AAAGAAAAAATAAAATGCCC+AGG - chr3_2:88754360-88754379 None:intergenic 25.0%
! CATACAAACATGTATTATCA+TGG - chr3_2:88754443-88754462 None:intergenic 25.0%
! ATAATACATGTTTGTATGTG+TGG + chr3_2:88754445-88754464 Msa0435570:intron 25.0%
!!! TTTTTGTTTTCTATATGCAG+TGG + chr3_2:88754686-88754705 Msa0435570:intron 25.0%
! AATTTGAGAATCCAAATTTG+AGG - chr3_2:88754894-88754913 None:intergenic 25.0%
! CAAATTTGGATTCTCAAATT+CGG + chr3_2:88754894-88754913 Msa0435570:intron 25.0%
! AAAAAAAAATTCTGTAGGCT+AGG + chr3_2:88754964-88754983 Msa0435570:intron 25.0%
! TATTCGTGAAAATATCAACA+CGG - chr3_2:88755023-88755042 None:intergenic 25.0%
!!! GTGAACATTTTTTGAAAAGT+AGG - chr3_2:88755146-88755165 None:intergenic 25.0%
! AAATGATACTGATATCATGA+GGG + chr3_2:88755330-88755349 Msa0435570:intron 25.0%
! CATAATTCCTCAATAGTTAT+GGG - chr3_2:88755376-88755395 None:intergenic 25.0%
! GAAGGATATAAAAAAATGGT+CGG - chr3_2:88755646-88755665 None:intergenic 25.0%
! GCTTGAAGGATATAAAAAAA+TGG - chr3_2:88755650-88755669 None:intergenic 25.0%
!!! GGTTTATTTTTCATTTTAGC+TGG + chr3_2:88755720-88755739 Msa0435570:intron 25.0%
!!! TTATTTTTCATTTTAGCTGG+AGG + chr3_2:88755723-88755742 Msa0435570:intron 25.0%
!!! TATTTTTCATTTTAGCTGGA+GGG + chr3_2:88755724-88755743 Msa0435570:intron 25.0%
! TGCTATATATAAAATACGTC+AGG + chr3_2:88755856-88755875 Msa0435570:intron 25.0%
!! AATCATAGTGTTGCTAAAAA+GGG - chr3_2:88756086-88756105 None:intergenic 25.0%
!! AAATCATAGTGTTGCTAAAA+AGG - chr3_2:88756087-88756106 None:intergenic 25.0%
! TTTCTACATTTGATAAGTTG+AGG - chr3_2:88756319-88756338 None:intergenic 25.0%
! ATTCAGTAGTTGAATTGTAA+TGG - chr3_2:88756371-88756390 None:intergenic 25.0%
!! TTTTTCTATCAAGTGATTGA+GGG - chr3_2:88756450-88756469 None:intergenic 25.0%
!! ATTTTTCTATCAAGTGATTG+AGG - chr3_2:88756451-88756470 None:intergenic 25.0%
!!! GCATGATTTTGAAAATTTAG+TGG + chr3_2:88756567-88756586 Msa0435570:intron 25.0%
! TATAAACTGAAGATACTAAG+TGG - chr3_2:88756668-88756687 None:intergenic 25.0%
! TAGTATCTTCAGTTTATAAC+TGG + chr3_2:88756670-88756689 Msa0435570:intron 25.0%
!!! TAAGATTCTTTTTCAACAAG+AGG - chr3_2:88756828-88756847 None:intergenic 25.0%
! AGATCAATTCTCATTTATGT+CGG - chr3_2:88756860-88756879 None:intergenic 25.0%
!! CATCTGATTTAGTATGTTTT+AGG + chr3_2:88757087-88757106 Msa0435570:intron 25.0%
!!! TGAATCTTTTTTCACAATGA+TGG + chr3_2:88757131-88757150 Msa0435570:intron 25.0%
! ATTGATTAAAGTAAGTGTAG+CGG + chr3_2:88757318-88757337 Msa0435570:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG + chr3_2:88757434-88757453 Msa0435570:intron 25.0%
! GTTCTATCAAAAACCATATT+TGG - chr3_2:88757616-88757635 None:intergenic 25.0%
!! CCTATTATTTCTTATCCAAT+AGG - chr3_2:88757813-88757832 None:intergenic 25.0%
! CCTATTGGATAAGAAATAAT+AGG + chr3_2:88757810-88757829 Msa0435570:intron 25.0%
!! AAATAATAGGGATTGCTATT+GGG + chr3_2:88757823-88757842 Msa0435570:intron 25.0%
! GTCTATCTCTTGAATAAATT+TGG + chr3_2:88757868-88757887 Msa0435570:intron 25.0%
!!! TAATAATTTTCTAGAGTGAC+TGG + chr3_2:88757991-88758010 Msa0435570:intron 25.0%
!!! AATAATTTTCTAGAGTGACT+GGG + chr3_2:88757992-88758011 Msa0435570:intron 25.0%
! TTGAGACAACTATTATTAAC+TGG - chr3_2:88758293-88758312 None:intergenic 25.0%
!! AATTTTTCCGATCTTTTTGT+TGG + chr3_2:88758345-88758364 Msa0435570:intron 25.0%
!!! CTCCTGATTTTTTAAAATCT+CGG + chr3_2:88758513-88758532 Msa0435570:intron 25.0%
!!! ATCCGAGATTTTAAAAAATC+AGG - chr3_2:88758518-88758537 None:intergenic 25.0%
!!! CTGTTAATTTGTGTTTTTTG+AGG - chr3_2:88758589-88758608 None:intergenic 25.0%
! AAAAACACAAATTAACAGTC+TGG + chr3_2:88758591-88758610 Msa0435570:intron 25.0%
! AATTGCAATTAATAGTTAGC+TGG - chr3_2:88759070-88759089 None:intergenic 25.0%
ATGAAATTGTTGTGCAGAAA+GGG + chr3_2:88752823-88752842 Msa0435570:intron 30.0%
CAAACATAAACATGTATGCA+AGG - chr3_2:88752981-88753000 None:intergenic 30.0%
AGATACAAAATTGTTCAAGC+TGG + chr3_2:88753088-88753107 Msa0435570:intron 30.0%
TTAATGTTCAAAGTTGACCT+GGG + chr3_2:88754340-88754359 Msa0435570:intron 30.0%
TAATTTCACAGAACTGTCTT+TGG - chr3_2:88754521-88754540 None:intergenic 30.0%
ATATTGAGCTAAGACACTAA+AGG - chr3_2:88754749-88754768 None:intergenic 30.0%
! AATTTGAGGTTCACAAAACA+TGG - chr3_2:88754880-88754899 None:intergenic 30.0%
! TGTTTTGTGAACCTCAAATT+TGG + chr3_2:88754880-88754899 Msa0435570:intron 30.0%
AGTTACACTCAAAAGGAATA+GGG - chr3_2:88754921-88754940 None:intergenic 30.0%
AAGTTACACTCAAAAGGAAT+AGG - chr3_2:88754922-88754941 None:intergenic 30.0%
TAACAGATGCATTATCAGAA+AGG - chr3_2:88755222-88755241 None:intergenic 30.0%
GATATCATGATCCTATTTCA+TGG + chr3_2:88755257-88755276 Msa0435570:intron 30.0%
ATAGAATACAGCCATGAAAT+AGG - chr3_2:88755271-88755290 None:intergenic 30.0%
TAACAGATGCATTATCAGAA+AGG - chr3_2:88755222-88755241 None:intergenic 30.0%
CAAATGATACTGATATCATG+AGG + chr3_2:88755329-88755348 Msa0435570:intron 30.0%
GCATAATTCCTCAATAGTTA+TGG - chr3_2:88755377-88755396 None:intergenic 30.0%
CAAATTATATCGTAGCTTGA+AGG - chr3_2:88755664-88755683 None:intergenic 30.0%
AAATTATAGCGTGCTGAATA+GGG - chr3_2:88755700-88755719 None:intergenic 30.0%
TTAAATCCATTAGAGGCTTA+GGG - chr3_2:88755800-88755819 None:intergenic 30.0%
CATAACCTTAAATCCATTAG+AGG - chr3_2:88755807-88755826 None:intergenic 30.0%
! TAAGGTTATGCTTTATTCCA+TGG + chr3_2:88755817-88755836 Msa0435570:intron 30.0%
AGGATGAAGAAGTAAATGAA+GGG - chr3_2:88755892-88755911 None:intergenic 30.0%
ATTCAGAAATTGCTTAGTAG+TGG + chr3_2:88756208-88756227 Msa0435570:intron 30.0%
! GTTTTCTTCTGTTGAACTTT+TGG - chr3_2:88756264-88756283 None:intergenic 30.0%
TCAACAGAAGAAAACTTTGA+AGG + chr3_2:88756269-88756288 Msa0435570:intron 30.0%
AGAATGTGAACATTCAAAAG+TGG - chr3_2:88756640-88756659 None:intergenic 30.0%
! TCTACCAACTTTTCTACTAT+AGG - chr3_2:88757430-88757449 None:intergenic 30.0%
TTGATCTACTCTTCTAACAA+AGG - chr3_2:88757500-88757519 None:intergenic 30.0%
TGTTAGAAGAGTAGATCAAA+TGG + chr3_2:88757501-88757520 Msa0435570:intron 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG - chr3_2:88757559-88757578 None:intergenic 30.0%
CTTTCTAATGGTTTCTCTAA+TGG - chr3_2:88757569-88757588 None:intergenic 30.0%
CATTAGAGAAACCATTAGAA+AGG + chr3_2:88757567-88757586 Msa0435570:intron 30.0%
AACCATTAGAAAGGATTTAG+AGG + chr3_2:88757576-88757595 Msa0435570:intron 30.0%
! TGGTTTTTGATAGAACACTA+TGG + chr3_2:88757620-88757639 Msa0435570:intron 30.0%
GAAATAATAGGGATTGCTAT+TGG + chr3_2:88757822-88757841 Msa0435570:intron 30.0%
TTACTAAGAGATAGCTTAAC+TGG - chr3_2:88758087-88758106 None:intergenic 30.0%
! TACATTTAGAACTTCTCCAA+TGG - chr3_2:88758115-88758134 None:intergenic 30.0%
CGGAAAAATTCATCTACAAT+TGG - chr3_2:88758335-88758354 None:intergenic 30.0%
TGAACATCCAACAAAAAGAT+CGG - chr3_2:88758355-88758374 None:intergenic 30.0%
! TTAAGAGTATGTTTCAATGG+AGG + chr3_2:88758383-88758402 Msa0435570:intron 30.0%
!! TTTCAATGGAGGTTTTTAGA+GGG + chr3_2:88758394-88758413 Msa0435570:intron 30.0%
!!! GTTTTTTGAGGGTTTTGAAA+GGG - chr3_2:88758577-88758596 None:intergenic 30.0%
!!! TGTTTTTTGAGGGTTTTGAA+AGG - chr3_2:88758578-88758597 None:intergenic 30.0%
TAAAACTCAAGTGCCTAAAA+AGG + chr3_2:88758674-88758693 Msa0435570:CDS 30.0%
AAACTAAGTCATGACTTTCT+GGG - chr3_2:88759011-88759030 None:intergenic 30.0%
AAAACTAAGTCATGACTTTC+TGG - chr3_2:88759012-88759031 None:intergenic 30.0%
!!! GTCATGACTTAGTTTTTAGT+TGG + chr3_2:88759016-88759035 Msa0435570:exon 30.0%
!!! AGGCTTAAGTTTTTTGTGAA+GGG + chr3_2:88759139-88759158 Msa0435570:three_prime_UTR 30.0%
GATGTTATTGATGAAACTTG+AGG + chr3_2:88759235-88759254 Msa0435570:three_prime_UTR 30.0%
GATGAGAAATGAAGTGAAGA+GGG - chr3_2:88752236-88752255 None:intergenic 35.0%
AGATGAGAAATGAAGTGAAG+AGG - chr3_2:88752237-88752256 None:intergenic 35.0%
!! TGTGAAAATGACGGATCTAA+CGG - chr3_2:88752272-88752291 None:intergenic 35.0%
TACATCAGAAGTTGAGAAGA+AGG + chr3_2:88752358-88752377 Msa0435570:CDS 35.0%
!!! TGTTGTGTTGATTTTTTCCG+TGG + chr3_2:88752651-88752670 Msa0435570:intron 35.0%
TAATGAGGTATATGACTGTG+AGG + chr3_2:88752744-88752763 Msa0435570:intron 35.0%
CATGAAATTGTTGTGCAGAA+AGG + chr3_2:88752822-88752841 Msa0435570:intron 35.0%
CTGAACTTTCAAAGTGAGTT+TGG + chr3_2:88752895-88752914 Msa0435570:intron 35.0%
TTTGTTCCATCCAAATGCTA+GGG - chr3_2:88753158-88753177 None:intergenic 35.0%
! TATCTTAGGCTTGGTTTAGA+TGG + chr3_2:88753298-88753317 Msa0435570:intron 35.0%
TTAGATGGTTACATGGTTGA+TGG + chr3_2:88753313-88753332 Msa0435570:intron 35.0%
TGGTAAATAGTGCAATGCAA+TGG + chr3_2:88753345-88753364 Msa0435570:intron 35.0%
GAAGTTACATATGCTACATG+TGG + chr3_2:88753507-88753526 Msa0435570:CDS 35.0%
GAAGGATCTTCTATACTGTA+TGG + chr3_2:88753561-88753580 Msa0435570:intron 35.0%
AGAACAGATATCCATGATCA+CGG - chr3_2:88753624-88753643 None:intergenic 35.0%
!! TGATAGTATTTGTTGTCCCA+AGG + chr3_2:88753779-88753798 Msa0435570:intron 35.0%
CCAATTAGCATCTGATCAAT+CGG - chr3_2:88753823-88753842 None:intergenic 35.0%
CGATTGATCAGATGCTAATT+GGG + chr3_2:88753821-88753840 Msa0435570:intron 35.0%
GATTGATCAGATGCTAATTG+GGG + chr3_2:88753822-88753841 Msa0435570:intron 35.0%
TGAGCTCAATGGTAATTCAA+TGG - chr3_2:88753854-88753873 None:intergenic 35.0%
! AACTGATGCATTGACAACAA+CGG - chr3_2:88754003-88754022 None:intergenic 35.0%
AAAAACGCAAGAGAAAAGGA+TGG - chr3_2:88754168-88754187 None:intergenic 35.0%
! ATCCTTTTCTCTTGCGTTTT+TGG + chr3_2:88754167-88754186 Msa0435570:intron 35.0%
ATCCAAAAACGCAAGAGAAA+AGG - chr3_2:88754172-88754191 None:intergenic 35.0%
TCTGATGCTCATATTTCATG+AGG - chr3_2:88754238-88754257 None:intergenic 35.0%
GTTAATGTTCAAAGTTGACC+TGG + chr3_2:88754339-88754358 Msa0435570:intron 35.0%
! TTGTTTTCTATATGCAGTGG+CGG + chr3_2:88754689-88754708 Msa0435570:intron 35.0%
! CTTGTGTTATTCATGTGTAC+AGG + chr3_2:88754802-88754821 Msa0435570:intron 35.0%
TGTTATTCATGTGTACAGGT+GGG + chr3_2:88754806-88754825 Msa0435570:intron 35.0%
!!! TTGGTTGGTAGTTTTCAGAT+TGG + chr3_2:88754849-88754868 Msa0435570:intron 35.0%
!!! TGGTTGGTAGTTTTCAGATT+GGG + chr3_2:88754850-88754869 Msa0435570:intron 35.0%
GTTGGAAAGTTACACTCAAA+AGG - chr3_2:88754928-88754947 None:intergenic 35.0%
TAGTTATGGGCTTGAAACAT+TGG - chr3_2:88755363-88755382 None:intergenic 35.0%
TTTCAAGCCCATAACTATTG+AGG + chr3_2:88755366-88755385 Msa0435570:intron 35.0%
GCATCAAATTCCTACACTTA+AGG - chr3_2:88755541-88755560 None:intergenic 35.0%
CAAATTATAGCGTGCTGAAT+AGG - chr3_2:88755701-88755720 None:intergenic 35.0%
CTATTCAGCACGCTATAATT+TGG + chr3_2:88755699-88755718 Msa0435570:intron 35.0%
CTTAAATCCATTAGAGGCTT+AGG - chr3_2:88755801-88755820 None:intergenic 35.0%
!! CTAAGCCTCTAATGGATTTA+AGG + chr3_2:88755799-88755818 Msa0435570:CDS 35.0%
GGATGAAGAAGTAAATGAAG+GGG - chr3_2:88755891-88755910 None:intergenic 35.0%
CAGGATGAAGAAGTAAATGA+AGG - chr3_2:88755893-88755912 None:intergenic 35.0%
!!! TTATTTTGGTAAACAGCGGT+TGG + chr3_2:88755930-88755949 Msa0435570:intron 35.0%
AATATACGATGCATGGATTC+AGG + chr3_2:88755953-88755972 Msa0435570:CDS 35.0%
ATATACGATGCATGGATTCA+GGG + chr3_2:88755954-88755973 Msa0435570:CDS 35.0%
TACACATACTTCTGTCCATT+AGG - chr3_2:88756058-88756077 None:intergenic 35.0%
TCAAGTATATCCACCTTCTT+GGG - chr3_2:88756159-88756178 None:intergenic 35.0%
AAGAAGGTGGATATACTTGA+GGG + chr3_2:88756159-88756178 Msa0435570:CDS 35.0%
ACAAATCTGTGTGCATGTAT+GGG - chr3_2:88756603-88756622 None:intergenic 35.0%
ATGTGAACATTCAAAAGTGG+AGG - chr3_2:88756637-88756656 None:intergenic 35.0%
!!! AGTTACCATTTTTTTCCCCA+AGG + chr3_2:88756732-88756751 Msa0435570:intron 35.0%
!!! CGCTTTGAAATAGCTTCTTT+TGG - chr3_2:88756796-88756815 None:intergenic 35.0%
TATTGCTGATAGACTTGATC+AGG + chr3_2:88756952-88756971 Msa0435570:CDS 35.0%
TCATTGCACTGAATTCACAA+AGG + chr3_2:88757020-88757039 Msa0435570:intron 35.0%
CATTGCACTGAATTCACAAA+GGG + chr3_2:88757021-88757040 Msa0435570:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG + chr3_2:88757423-88757442 Msa0435570:intron 35.0%
TGGTAGAAAATAGGCTTAGA+TGG + chr3_2:88757443-88757462 Msa0435570:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG + chr3_2:88757448-88757467 Msa0435570:intron 35.0%
!! CTTCTAACAAAGGCATCTAA+GGG - chr3_2:88757490-88757509 None:intergenic 35.0%
!! TCTTCTAACAAAGGCATCTA+AGG - chr3_2:88757491-88757510 None:intergenic 35.0%
TAGAAGAGTAGATCAAATGG+AGG + chr3_2:88757504-88757523 Msa0435570:intron 35.0%
GACCTCTAAATCCTTTCTAA+TGG - chr3_2:88757581-88757600 None:intergenic 35.0%
GCTACATGCTATTACAATGT+GGG - chr3_2:88757776-88757795 None:intergenic 35.0%
!! TCTCTTAGTAAGAGTACCAT+TGG + chr3_2:88758096-88758115 Msa0435570:intron 35.0%
ATAGTTGTCTCAAATGCATC+AGG + chr3_2:88758300-88758319 Msa0435570:intron 35.0%
!! GTTTCAATGGAGGTTTTTAG+AGG + chr3_2:88758393-88758412 Msa0435570:intron 35.0%
!! TTCAATGGAGGTTTTTAGAG+GGG + chr3_2:88758395-88758414 Msa0435570:intron 35.0%
!!! AGGCACTTGAGTTTTATTCA+CGG - chr3_2:88758670-88758689 None:intergenic 35.0%
!!! TTTGCAGTTGCACCTTTTTT+TGG - chr3_2:88758705-88758724 None:intergenic 35.0%
AATAGCGAGGATGAAGTTAA+TGG + chr3_2:88758810-88758829 Msa0435570:CDS 35.0%
! TTAGAACTGCTGTTATTTGC+AGG - chr3_2:88758951-88758970 None:intergenic 35.0%
TTTCGTTGCAACTCAAAATG+CGG + chr3_2:88759043-88759062 Msa0435570:three_prime_UTR 35.0%
!!! AACCCTTTTTTGGAATGTAG+AGG + chr3_2:88759119-88759138 Msa0435570:three_prime_UTR 35.0%
AGCCTCTACATTCCAAAAAA+GGG - chr3_2:88759124-88759143 None:intergenic 35.0%
AAGCCTCTACATTCCAAAAA+AGG - chr3_2:88759125-88759144 None:intergenic 35.0%
!!! GAGGCTTAAGTTTTTTGTGA+AGG + chr3_2:88759138-88759157 Msa0435570:three_prime_UTR 35.0%
!!! CTTAAGTTTTTTGTGAAGGG+AGG + chr3_2:88759142-88759161 Msa0435570:three_prime_UTR 35.0%
!! TTTTTGTGAAGGGAGGTATA+CGG + chr3_2:88759149-88759168 Msa0435570:three_prime_UTR 35.0%
TTAAGGTTCTATTAGGCTGA+TGG - chr3_2:88759193-88759212 None:intergenic 35.0%
CCTAATAGAACCTTAATCAG+CGG + chr3_2:88759197-88759216 Msa0435570:three_prime_UTR 35.0%
TTCATCAATAACATCTCACC+AGG - chr3_2:88759230-88759249 None:intergenic 35.0%
!! TGAAGAGGGTGTTAAGGAAA+TGG - chr3_2:88752222-88752241 None:intergenic 40.0%
!! ATGAAGTGAAGAGGGTGTTA+AGG - chr3_2:88752228-88752247 None:intergenic 40.0%
AACAAGAGTTCACCTCCTTT+GGG - chr3_2:88752404-88752423 None:intergenic 40.0%
AAACAAGAGTTCACCTCCTT+TGG - chr3_2:88752405-88752424 None:intergenic 40.0%
GAAAGTTCAGAAACCACAGT+TGG - chr3_2:88752885-88752904 None:intergenic 40.0%
AAAATTGTTCAAGCTGGAGC+TGG + chr3_2:88753094-88753113 Msa0435570:CDS 40.0%
AAATTGTTCAAGCTGGAGCT+GGG + chr3_2:88753095-88753114 Msa0435570:CDS 40.0%
CCTCTGTAACAACTACAGTA+TGG - chr3_2:88753126-88753145 None:intergenic 40.0%
CCATACTGTAGTTGTTACAG+AGG + chr3_2:88753123-88753142 Msa0435570:CDS 40.0%
ACTGTAGTTGTTACAGAGGA+TGG + chr3_2:88753127-88753146 Msa0435570:CDS 40.0%
GATGGAAATTCCCTAGCATT+TGG + chr3_2:88753145-88753164 Msa0435570:CDS 40.0%
GAAATTCCCTAGCATTTGGA+TGG + chr3_2:88753149-88753168 Msa0435570:CDS 40.0%
GTTTGTTCCATCCAAATGCT+AGG - chr3_2:88753159-88753178 None:intergenic 40.0%
GCATTTGGATGGAACAAACA+TGG + chr3_2:88753160-88753179 Msa0435570:CDS 40.0%
! CATACCAGTTTTTGCAGAAC+CGG - chr3_2:88753197-88753216 None:intergenic 40.0%
GATCCATGCATGCATATCTT+AGG + chr3_2:88753284-88753303 Msa0435570:intron 40.0%
AAGCCTAAGATATGCATGCA+TGG - chr3_2:88753290-88753309 None:intergenic 40.0%
ATGCATGCATATCTTAGGCT+TGG + chr3_2:88753289-88753308 Msa0435570:intron 40.0%
GCTTGGTTTAGATGGTTACA+TGG + chr3_2:88753306-88753325 Msa0435570:intron 40.0%
GTTACATATGCTACATGTGG+TGG + chr3_2:88753510-88753529 Msa0435570:CDS 40.0%
TGATTCTCTATCCGTGATCA+TGG + chr3_2:88753610-88753629 Msa0435570:intron 40.0%
ATTATGATTGCTAGGACTGC+TGG + chr3_2:88753687-88753706 Msa0435570:intron 40.0%
TTATGATTGCTAGGACTGCT+GGG + chr3_2:88753688-88753707 Msa0435570:intron 40.0%
CAGATAACGAGGTATGATTG+AGG + chr3_2:88753742-88753761 Msa0435570:intron 40.0%
AGTTAAGACACTCACACCTT+GGG - chr3_2:88753798-88753817 None:intergenic 40.0%
AAGTTAAGACACTCACACCT+TGG - chr3_2:88753799-88753818 None:intergenic 40.0%
CCGATTGATCAGATGCTAAT+TGG + chr3_2:88753820-88753839 Msa0435570:intron 40.0%
GAAAGCTAGTATGAGCTCAA+TGG - chr3_2:88753865-88753884 None:intergenic 40.0%
!! TTGAGCTCATACTAGCTTTC+AGG + chr3_2:88753865-88753884 Msa0435570:intron 40.0%
!! TGAGCTCATACTAGCTTTCA+GGG + chr3_2:88753866-88753885 Msa0435570:intron 40.0%
ATGTTATCCATTGTTGAGGC+AGG + chr3_2:88753932-88753951 Msa0435570:intron 40.0%
AGACGAATATCAAGCGATCA+TGG + chr3_2:88754255-88754274 Msa0435570:intron 40.0%
GACGAATATCAAGCGATCAT+GGG + chr3_2:88754256-88754275 Msa0435570:intron 40.0%
GCATGTGGAACAAATCATAC+AGG + chr3_2:88754607-88754626 Msa0435570:CDS 40.0%
! GTGTTATTCATGTGTACAGG+TGG + chr3_2:88754805-88754824 Msa0435570:intron 40.0%
GTTATTCATGTGTACAGGTG+GGG + chr3_2:88754807-88754826 Msa0435570:intron 40.0%
TTATGGTGGTTATGGAAGGT+TGG + chr3_2:88754830-88754849 Msa0435570:intron 40.0%
AATTCTGTAGGCTAGGACAT+CGG + chr3_2:88754971-88754990 Msa0435570:intron 40.0%
GCTGAAATAATTGCATCAGG+AGG - chr3_2:88755057-88755076 None:intergenic 40.0%
CCTGCTGAAATAATTGCATC+AGG - chr3_2:88755060-88755079 None:intergenic 40.0%
CCTGATGCAATTATTTCAGC+AGG + chr3_2:88755057-88755076 Msa0435570:CDS 40.0%
CATCTCTAACACACATTCTC+TGG + chr3_2:88755119-88755138 Msa0435570:intron 40.0%
AATATGACGTGCCTCTTTCA+TGG + chr3_2:88755167-88755186 Msa0435570:intron 40.0%
GATACTGATATCATGAGGGT+TGG + chr3_2:88755334-88755353 Msa0435570:intron 40.0%
!! AGCTTAGCCTTAGAAACTCT+AGG - chr3_2:88755500-88755519 None:intergenic 40.0%
! ACTTAAGGTGCTAGCTCAAT+GGG - chr3_2:88755526-88755545 None:intergenic 40.0%
TGGGGCAAAATAAAGAACAC+CGG + chr3_2:88755759-88755778 Msa0435570:CDS 40.0%
TATACGATGCATGGATTCAG+GGG + chr3_2:88755955-88755974 Msa0435570:CDS 40.0%
TGATTCCTCGTGCATAAGTT+GGG + chr3_2:88756000-88756019 Msa0435570:CDS 40.0%
CTCAAGTATATCCACCTTCT+TGG - chr3_2:88756160-88756179 None:intergenic 40.0%
CAAGAAGGTGGATATACTTG+AGG + chr3_2:88756158-88756177 Msa0435570:CDS 40.0%
! TTGAGGGTATGCATGTAATG+AGG + chr3_2:88756175-88756194 Msa0435570:CDS 40.0%
CAGAAATTGCTTAGTAGTGG+AGG + chr3_2:88756211-88756230 Msa0435570:intron 40.0%
CAAATCTGTGTGCATGTATG+GGG - chr3_2:88756602-88756621 None:intergenic 40.0%
GACAAATCTGTGTGCATGTA+TGG - chr3_2:88756604-88756623 None:intergenic 40.0%
GAAAGCCTTGGGGAAAAAAA+TGG - chr3_2:88756740-88756759 None:intergenic 40.0%
!! TTCTCAAACAGTGTTGCTTG+TGG + chr3_2:88756893-88756912 Msa0435570:intron 40.0%
!! AAACAGTGTTGCTTGTGGTT+TGG + chr3_2:88756898-88756917 Msa0435570:intron 40.0%
!! AACAGTGTTGCTTGTGGTTT+GGG + chr3_2:88756899-88756918 Msa0435570:intron 40.0%
!! GCTTGTGATTCTGAGATGAT+AGG - chr3_2:88756994-88757013 None:intergenic 40.0%
ATGAACAAACTGACGAGAGA+AGG - chr3_2:88757228-88757247 None:intergenic 40.0%
AGACTAGACAGGATAGGATT+AGG + chr3_2:88757371-88757390 Msa0435570:intron 40.0%
TAGATCAAATGGAGGAGAGT+CGG + chr3_2:88757512-88757531 Msa0435570:intron 40.0%
! CAACGAGTTGGATCCAAATA+TGG + chr3_2:88757600-88757619 Msa0435570:intron 40.0%
! AAGCCTTATCCCACTAAGTT+GGG - chr3_2:88757669-88757688 None:intergenic 40.0%
TGTACGAAACTGACTGTCAT+TGG + chr3_2:88757726-88757745 Msa0435570:intron 40.0%
CGCTACATGCTATTACAATG+TGG - chr3_2:88757777-88757796 None:intergenic 40.0%
! CGTTGATTAGCTACTCCTAT+TGG + chr3_2:88757795-88757814 Msa0435570:intron 40.0%
!!! ATTTTCTAGAGTGACTGGGT+TGG + chr3_2:88757996-88758015 Msa0435570:intron 40.0%
GGAGTGAATGAGTGCTTATT+AGG + chr3_2:88758017-88758036 Msa0435570:intron 40.0%
CAACGAAATCAGTACCAGTT+TGG - chr3_2:88758624-88758643 None:intergenic 40.0%
AACTCAAGTGCCTAAAAAGG+CGG + chr3_2:88758677-88758696 Msa0435570:CDS 40.0%
!!! TTTTTTGGTGCCGCCTTTTT+AGG - chr3_2:88758690-88758709 None:intergenic 40.0%
AAAAAGGCGGCACCAAAAAA+AGG + chr3_2:88758690-88758709 Msa0435570:CDS 40.0%
TGAAGAAAGTGACAATAGCG+AGG + chr3_2:88758797-88758816 Msa0435570:CDS 40.0%
! CCGCTGATTAAGGTTCTATT+AGG - chr3_2:88759200-88759219 None:intergenic 40.0%
GATACTACTACAGTGAGGTG+CGG - chr3_2:88752159-88752178 None:intergenic 45.0%
ATGAGAGGAGAGAAGGAGAT+TGG - chr3_2:88752191-88752210 None:intergenic 45.0%
!! AGAGGGTGTTAAGGAAATGG+CGG - chr3_2:88752219-88752238 None:intergenic 45.0%
ACGGATCTAACGGCTAGTAT+TGG - chr3_2:88752262-88752281 None:intergenic 45.0%
! TTTTTGACCGTTACTCTCGC+CGG + chr3_2:88752317-88752336 Msa0435570:five_prime_UTR 45.0%
AGACATTTCACCGTTCACTC+CGG - chr3_2:88752339-88752358 None:intergenic 45.0%
AGAAGTTGAGAAGAAGGTCG+AGG + chr3_2:88752364-88752383 Msa0435570:CDS 45.0%
GAAGAGAATCAAGCTCCCAA+AGG + chr3_2:88752386-88752405 Msa0435570:CDS 45.0%
!!! GGAGGTGAACTCTTGTTTTG+TGG + chr3_2:88752407-88752426 Msa0435570:CDS 45.0%
AGGAGAGACCAAATTACCCT+CGG - chr3_2:88752474-88752493 None:intergenic 45.0%
CAGCATTCGATACGTTGCAT+CGG + chr3_2:88752520-88752539 Msa0435570:CDS 45.0%
AGCATTCGATACGTTGCATC+GGG + chr3_2:88752521-88752540 Msa0435570:CDS 45.0%
!! TTGAAGGGCGTTGCTATACA+TGG + chr3_2:88752716-88752735 Msa0435570:CDS 45.0%
!! TGAAGGGCGTTGCTATACAT+GGG + chr3_2:88752717-88752736 Msa0435570:CDS 45.0%
GAGATACCATTCAGCGTGAT+AGG + chr3_2:88752859-88752878 Msa0435570:CDS 45.0%
TGGAACAAACATGGACAGCT+AGG + chr3_2:88753169-88753188 Msa0435570:CDS 45.0%
AAACATGGACAGCTAGGTTC+CGG + chr3_2:88753175-88753194 Msa0435570:CDS 45.0%
!! GATGGTTACATGGTTGATGG+TGG + chr3_2:88753316-88753335 Msa0435570:intron 45.0%
!! ATGGTTGATGGTGGAGTGAA+TGG + chr3_2:88753325-88753344 Msa0435570:intron 45.0%
ATCAGATGCTAATTGGGGCT+GGG + chr3_2:88753827-88753846 Msa0435570:intron 45.0%
AAATGAGCCTGCCTCAACAA+TGG - chr3_2:88753942-88753961 None:intergenic 45.0%
! TTTTCTATATGCAGTGGCGG+TGG + chr3_2:88754692-88754711 Msa0435570:intron 45.0%
ATTCTGTAGGCTAGGACATC+GGG + chr3_2:88754972-88754991 Msa0435570:intron 45.0%
GTGAAAATATCAACACGGCG+TGG - chr3_2:88755018-88755037 None:intergenic 45.0%
GTGAATTCTGCTTGTACTGC+AGG + chr3_2:88755084-88755103 Msa0435570:CDS 45.0%
! CATTTTACAACCGACCACGA+GGG + chr3_2:88755459-88755478 Msa0435570:intron 45.0%
! ATTTTACAACCGACCACGAG+GGG + chr3_2:88755460-88755479 Msa0435570:intron 45.0%
CTCAGCACCTAGAGTTTCTA+AGG + chr3_2:88755490-88755509 Msa0435570:intron 45.0%
! CACTTAAGGTGCTAGCTCAA+TGG - chr3_2:88755527-88755546 None:intergenic 45.0%
TGAGCTAGCACCTTAAGTGT+AGG + chr3_2:88755528-88755547 Msa0435570:intron 45.0%
TAAAGAACACCGGTGATGAC+TGG + chr3_2:88755769-88755788 Msa0435570:CDS 45.0%
GATGTACCCTAAGCCTCTAA+TGG + chr3_2:88755791-88755810 Msa0435570:CDS 45.0%
CGGTTGGAATATACGATGCA+TGG + chr3_2:88755946-88755965 Msa0435570:CDS 45.0%
ATACGATGCATGGATTCAGG+GGG + chr3_2:88755956-88755975 Msa0435570:CDS 45.0%
! GGGGTATGCACCATTTTGTT+GGG + chr3_2:88755975-88755994 Msa0435570:CDS 45.0%
! GGGTATGCACCATTTTGTTG+GGG + chr3_2:88755976-88755995 Msa0435570:CDS 45.0%
AGGAATCAGCCCCAACAAAA+TGG - chr3_2:88755988-88756007 None:intergenic 45.0%
CTGATTCCTCGTGCATAAGT+TGG + chr3_2:88755999-88756018 Msa0435570:CDS 45.0%
GATTCCTCGTGCATAAGTTG+GGG + chr3_2:88756001-88756020 Msa0435570:CDS 45.0%
GGAACAGCTGAAGACCTAAA+GGG - chr3_2:88756138-88756157 None:intergenic 45.0%
AGCTTACTGAGAAAGCCTTG+GGG - chr3_2:88756750-88756769 None:intergenic 45.0%
CAGCTTACTGAGAAAGCCTT+GGG - chr3_2:88756751-88756770 None:intergenic 45.0%
! TTGTGGTTTGGGTCATTCCA+TGG + chr3_2:88756910-88756929 Msa0435570:CDS 45.0%
TTTGGGTCATTCCATGGTTG+TGG + chr3_2:88756916-88756935 Msa0435570:CDS 45.0%
! AAGTAAGTGTAGCGGAGATG+TGG + chr3_2:88757326-88757345 Msa0435570:intron 45.0%
GATGAGTGGTAAGACTAGAC+AGG + chr3_2:88757360-88757379 Msa0435570:intron 45.0%
GTGGTAAGACTAGACAGGAT+AGG + chr3_2:88757365-88757384 Msa0435570:intron 45.0%
TGACACCATTAGAGAGAGAG+TGG + chr3_2:88757396-88757415 Msa0435570:intron 45.0%
GACACCATTAGAGAGAGAGT+GGG + chr3_2:88757397-88757416 Msa0435570:intron 45.0%
ACACCATTAGAGAGAGAGTG+GGG + chr3_2:88757398-88757417 Msa0435570:intron 45.0%
AGATCAAATGGAGGAGAGTC+GGG + chr3_2:88757513-88757532 Msa0435570:intron 45.0%
AGTCGGGTTAAAAGAGGTAG+AGG + chr3_2:88757529-88757548 Msa0435570:intron 45.0%
GGATTTAGAGGTCAACGAGT+TGG + chr3_2:88757588-88757607 Msa0435570:intron 45.0%
! CTTATCCCACTAAGTTGGGT+CGG - chr3_2:88757665-88757684 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+TGG - chr3_2:88757670-88757689 None:intergenic 45.0%
CAACTTAGTGGGATAAGGCT+TGG + chr3_2:88757668-88757687 Msa0435570:intron 45.0%
AGAGTAAGTGATGTGACTCG+TGG + chr3_2:88758058-88758077 Msa0435570:intron 45.0%
GAGTAAGTGATGTGACTCGT+GGG + chr3_2:88758059-88758078 Msa0435570:intron 45.0%
AGTAAGTGATGTGACTCGTG+GGG + chr3_2:88758060-88758079 Msa0435570:intron 45.0%
CTGCAGCTTGATACACATGA+TGG + chr3_2:88758200-88758219 Msa0435570:intron 45.0%
ACACATGATGGCAAAGCTGT+TGG + chr3_2:88758212-88758231 Msa0435570:CDS 45.0%
TTGAAAGGGAGAGTCTTGGA+GGG - chr3_2:88758563-88758582 None:intergenic 45.0%
TTTGAAAGGGAGAGTCTTGG+AGG - chr3_2:88758564-88758583 None:intergenic 45.0%
!!! GGTTTTGAAAGGGAGAGTCT+TGG - chr3_2:88758567-88758586 None:intergenic 45.0%
TTTCGTTGTGTTCTTGCTGC+AGG + chr3_2:88758636-88758655 Msa0435570:intron 45.0%
AAGCTGACAGCTCAAAGAAG+AGG + chr3_2:88758727-88758746 Msa0435570:CDS 45.0%
CTCAGAAGAAGAGCAAGAAG+AGG + chr3_2:88758773-88758792 Msa0435570:CDS 45.0%
CGAGGATGAAGTTAATGGTG+AGG + chr3_2:88758815-88758834 Msa0435570:CDS 45.0%
TGAAGTTAATGGTGAGGCTG+AGG + chr3_2:88758821-88758840 Msa0435570:CDS 45.0%
GCTGAGGTTAAAACATCACG+TGG + chr3_2:88758837-88758856 Msa0435570:CDS 45.0%
GAGGTTAAAACATCACGTGG+TGG + chr3_2:88758840-88758859 Msa0435570:CDS 45.0%
! TCACGTGGTGGAAAAAGTTC+TGG + chr3_2:88758852-88758871 Msa0435570:CDS 45.0%
! TGGTGGAAAAAGTTCTGGCA+AGG + chr3_2:88758857-88758876 Msa0435570:CDS 45.0%
! GGTGGAAAAAGTTCTGGCAA+GGG + chr3_2:88758858-88758877 Msa0435570:CDS 45.0%
TCTTCTCCAGTGAAGTCAAC+TGG + chr3_2:88758972-88758991 Msa0435570:CDS 45.0%
! CTCTTACCAGTTGACTTCAC+TGG - chr3_2:88758981-88759000 None:intergenic 45.0%
GTGAAGTCAACTGGTAAGAG+AGG + chr3_2:88758981-88759000 Msa0435570:CDS 45.0%
GGCTGATGGAAAACTGAAGA+AGG - chr3_2:88759179-88759198 None:intergenic 45.0%
ATAGAACCTTAATCAGCGGC+TGG + chr3_2:88759201-88759220 Msa0435570:three_prime_UTR 45.0%
!!! AAAGTATTATATATTTATTT+TGG + chr3_2:88755916-88755935 Msa0435570:intron 5.0%
!!! AATATTTTTTTATATAACAA+TGG + chr3_2:88756540-88756559 Msa0435570:intron 5.0%
!! AAAAAAAAAATATATAAGTT+AGG - chr3_2:88758176-88758195 None:intergenic 5.0%
GCGCAGATACTACTACAGTG+AGG - chr3_2:88752164-88752183 None:intergenic 50.0%
GGGAAAGATGAGAGGAGAGA+AGG - chr3_2:88752198-88752217 None:intergenic 50.0%
! GAAATGGCGGGAAAGATGAG+AGG - chr3_2:88752206-88752225 None:intergenic 50.0%
!! GAGGGTGTTAAGGAAATGGC+GGG - chr3_2:88752218-88752237 None:intergenic 50.0%
GAGAATCAAGCTCCCAAAGG+AGG + chr3_2:88752389-88752408 Msa0435570:CDS 50.0%
GATATCGTTGGTCGTCGCAA+AGG + chr3_2:88752443-88752462 Msa0435570:CDS 50.0%
AGCTGCATTCATCGCAACCA+CGG - chr3_2:88752671-88752690 None:intergenic 50.0%
! TTCGTGTCATTGCGTGGCAT+TGG + chr3_2:88752690-88752709 Msa0435570:CDS 50.0%
!! GAAGGGCGTTGCTATACATG+GGG + chr3_2:88752718-88752737 Msa0435570:CDS 50.0%
!! AAGGGCGTTGCTATACATGG+GGG + chr3_2:88752719-88752738 Msa0435570:CDS 50.0%
! CTATACATGGGGGCGTAATG+AGG + chr3_2:88752729-88752748 Msa0435570:CDS 50.0%
TGTTGTGCAGAAAGGGCAAC+TGG + chr3_2:88752830-88752849 Msa0435570:intron 50.0%
GTTGTGCAGAAAGGGCAACT+GGG + chr3_2:88752831-88752850 Msa0435570:intron 50.0%
! AGTTGGCCTATCACGCTGAA+TGG - chr3_2:88752868-88752887 None:intergenic 50.0%
GGTTCCGGTTCTGCAAAAAC+TGG + chr3_2:88753190-88753209 Msa0435570:CDS 50.0%
CGACACAAGACAGCGAATAG+GGG - chr3_2:88753487-88753506 None:intergenic 50.0%
CCGACACAAGACAGCGAATA+GGG - chr3_2:88753488-88753507 None:intergenic 50.0%
CCCTATTCGCTGTCTTGTGT+CGG + chr3_2:88753485-88753504 Msa0435570:CDS 50.0%
TCCGACACAAGACAGCGAAT+AGG - chr3_2:88753489-88753508 None:intergenic 50.0%
GTGTGGCTATCTTCAGTCGA+AGG + chr3_2:88753543-88753562 Msa0435570:CDS 50.0%
TTCCACAGTATGGGCAGCTT+GGG + chr3_2:88753712-88753731 Msa0435570:CDS 50.0%
TGGGCATGGAACAGATAACG+AGG + chr3_2:88753731-88753750 Msa0435570:CDS 50.0%
GATCAGATGCTAATTGGGGC+TGG + chr3_2:88753826-88753845 Msa0435570:intron 50.0%
GAGCAATAGCTTCCCTTGCT+GGG + chr3_2:88754566-88754585 Msa0435570:CDS 50.0%
AGCAATAGCTTCCCTTGCTG+GGG + chr3_2:88754567-88754586 Msa0435570:CDS 50.0%
GACAATGGTTTCCCCAGCAA+GGG - chr3_2:88754581-88754600 None:intergenic 50.0%
TGACAATGGTTTCCCCAGCA+AGG - chr3_2:88754582-88754601 None:intergenic 50.0%
TGCTGGGGAAACCATTGTCA+AGG + chr3_2:88754582-88754601 Msa0435570:CDS 50.0%
TGGGGAAACCATTGTCAAGG+TGG + chr3_2:88754585-88754604 Msa0435570:CDS 50.0%
ACCATTGTCAAGGTGGCATG+TGG + chr3_2:88754592-88754611 Msa0435570:CDS 50.0%
TCCACATGCCACCTTGACAA+TGG - chr3_2:88754596-88754615 None:intergenic 50.0%
CATGTGTACAGGTGGGGTTA+TGG + chr3_2:88754813-88754832 Msa0435570:intron 50.0%
AGGTGGGGTTATGGTGGTTA+TGG + chr3_2:88754822-88754841 Msa0435570:intron 50.0%
GGGGTTATGGTGGTTATGGA+AGG + chr3_2:88754826-88754845 Msa0435570:CDS 50.0%
! GGTGGTTATGGAAGGTTGGT+TGG + chr3_2:88754834-88754853 Msa0435570:intron 50.0%
ACAGCCATCAGCCATGAAAG+AGG - chr3_2:88755181-88755200 None:intergenic 50.0%
CCTCGTGGTCGGTTGTAAAA+TGG - chr3_2:88755461-88755480 None:intergenic 50.0%
! CCATTTTACAACCGACCACG+AGG + chr3_2:88755458-88755477 Msa0435570:intron 50.0%
AGTTTGAATCCCCTCGTGGT+CGG - chr3_2:88755472-88755491 None:intergenic 50.0%
TGGAGGGCAGCTGTATATGT+GGG + chr3_2:88755740-88755759 Msa0435570:CDS 50.0%
AGGGTACATCCAGTCATCAC+CGG - chr3_2:88755781-88755800 None:intergenic 50.0%
!! GGGGGTATGCACCATTTTGT+TGG + chr3_2:88755974-88755993 Msa0435570:CDS 50.0%
ATGACCCCAACTTATGCACG+AGG - chr3_2:88756008-88756027 None:intergenic 50.0%
AGTTGGGGTCATGCTCAGAA+TGG + chr3_2:88756016-88756035 Msa0435570:CDS 50.0%
TCATGCTCAGAATGGAGAGC+TGG + chr3_2:88756024-88756043 Msa0435570:CDS 50.0%
CATGCTCAGAATGGAGAGCT+GGG + chr3_2:88756025-88756044 Msa0435570:CDS 50.0%
CAGAATGGAGAGCTGGGATA+CGG + chr3_2:88756031-88756050 Msa0435570:CDS 50.0%
CCTAAAGGGCAAGTGCAAAC+AGG - chr3_2:88756124-88756143 None:intergenic 50.0%
CCTGTTTGCACTTGCCCTTT+AGG + chr3_2:88756121-88756140 Msa0435570:intron 50.0%
GGGAACAGCTGAAGACCTAA+AGG - chr3_2:88756139-88756158 None:intergenic 50.0%
GTCTTCAGCTGTTCCCAAGA+AGG + chr3_2:88756143-88756162 Msa0435570:CDS 50.0%
TTCAGCTGTTCCCAAGAAGG+TGG + chr3_2:88756146-88756165 Msa0435570:CDS 50.0%
! GTGTGCATGTATGGGGCATT+TGG - chr3_2:88756595-88756614 None:intergenic 50.0%
GCAGCTTACTGAGAAAGCCT+TGG - chr3_2:88756752-88756771 None:intergenic 50.0%
TGCTCTGTCAACCACAACCA+TGG - chr3_2:88756930-88756949 None:intergenic 50.0%
TGGATGTTGCACTGGATGAG+TGG + chr3_2:88757346-88757365 Msa0435570:intron 50.0%
CACCATTAGAGAGAGAGTGG+GGG + chr3_2:88757399-88757418 Msa0435570:intron 50.0%
TACCCCCACTCTCTCTCTAA+TGG - chr3_2:88757404-88757423 None:intergenic 50.0%
GAGGAGAGTCGGGTTAAAAG+AGG + chr3_2:88757523-88757542 Msa0435570:intron 50.0%
! ACTAAGTTGGGTCGGCTACA+TGG - chr3_2:88757657-88757676 None:intergenic 50.0%
ATGTAGCCGACCCAACTTAG+TGG + chr3_2:88757656-88757675 Msa0435570:intron 50.0%
TGTAGCCGACCCAACTTAGT+GGG + chr3_2:88757657-88757676 Msa0435570:intron 50.0%
CGACCCAACTTAGTGGGATA+AGG + chr3_2:88757663-88757682 Msa0435570:intron 50.0%
! GATGGCAAAGCTGTTGGTGA+AGG + chr3_2:88758218-88758237 Msa0435570:CDS 50.0%
AGTCTGGTCTGTGTCCAAAC+TGG + chr3_2:88758607-88758626 Msa0435570:intron 50.0%
! GAAAAAGTTCTGGCAAGGGC+CGG + chr3_2:88758862-88758881 Msa0435570:CDS 50.0%
! AAAAAGTTCTGGCAAGGGCC+GGG + chr3_2:88758863-88758882 Msa0435570:CDS 50.0%
ACACTTTGGATGCCTTACCC+CGG - chr3_2:88758884-88758903 None:intergenic 50.0%
! GGGTAAGGCATCCAAAGTGT+CGG + chr3_2:88758884-88758903 Msa0435570:CDS 50.0%
!! ATCCAAAGTGTCGGAGTCTG+AGG + chr3_2:88758893-88758912 Msa0435570:CDS 50.0%
!! TCCAAAGTGTCGGAGTCTGA+GGG + chr3_2:88758894-88758913 Msa0435570:CDS 50.0%
GTTCACTCCGGCGAGAGTAA+CGG - chr3_2:88752327-88752346 None:intergenic 55.0%
GTTACTCTCGCCGGAGTGAA+CGG + chr3_2:88752326-88752345 Msa0435570:five_prime_UTR 55.0%
!!! TGTTTTGTGGTGCCACGTGC+TGG + chr3_2:88752420-88752439 Msa0435570:CDS 55.0%
!!! GTTTTGTGGTGCCACGTGCT+GGG + chr3_2:88752421-88752440 Msa0435570:CDS 55.0%
ACCAACGATATCCCAGCACG+TGG - chr3_2:88752435-88752454 None:intergenic 55.0%
AGGTCCTGCCGAGGGTAATT+TGG + chr3_2:88752463-88752482 Msa0435570:CDS 55.0%
GAGACCAAATTACCCTCGGC+AGG - chr3_2:88752470-88752489 None:intergenic 55.0%
! TGCAGCTTCGTGTCATTGCG+TGG + chr3_2:88752684-88752703 Msa0435570:intron 55.0%
! TGCGTGGCATTGGACGTTGA+AGG + chr3_2:88752700-88752719 Msa0435570:CDS 55.0%
! GCGTGGCATTGGACGTTGAA+GGG + chr3_2:88752701-88752720 Msa0435570:CDS 55.0%
CAGAAAGGGCAACTGGGTCA+TGG + chr3_2:88752837-88752856 Msa0435570:intron 55.0%
TCAGCGTGATAGGCCAACTG+TGG + chr3_2:88752869-88752888 Msa0435570:CDS 55.0%
!! GTGGTGGCGACTTTTCTGTG+TGG + chr3_2:88753526-88753545 Msa0435570:CDS 55.0%
ACTGCTGGGCTTCCACAGTA+TGG + chr3_2:88753702-88753721 Msa0435570:CDS 55.0%
CTGCTGGGCTTCCACAGTAT+GGG + chr3_2:88753703-88753722 Msa0435570:CDS 55.0%
CTTCCACAGTATGGGCAGCT+TGG + chr3_2:88753711-88753730 Msa0435570:CDS 55.0%
GAAGCTATTGCTCGAGGACG+TGG - chr3_2:88754559-88754578 None:intergenic 55.0%
GCAAGGGAAGCTATTGCTCG+AGG - chr3_2:88754565-88754584 None:intergenic 55.0%
CGAGCAATAGCTTCCCTTGC+TGG + chr3_2:88754565-88754584 Msa0435570:CDS 55.0%
GCAGTGGCGGTGGATAAGAA+TGG + chr3_2:88754702-88754721 Msa0435570:intron 55.0%
GTGTACAGGTGGGGTTATGG+TGG + chr3_2:88754816-88754835 Msa0435570:intron 55.0%
CGTGCCTCTTTCATGGCTGA+TGG + chr3_2:88755174-88755193 Msa0435570:intron 55.0%
GCTGAGTTTGAATCCCCTCG+TGG - chr3_2:88755476-88755495 None:intergenic 55.0%
CTGGAGGGCAGCTGTATATG+TGG + chr3_2:88755739-88755758 Msa0435570:CDS 55.0%
GGAGGGCAGCTGTATATGTG+GGG + chr3_2:88755741-88755760 Msa0435570:CDS 55.0%
GAGCTGGGATACGGACCTAA+TGG + chr3_2:88756040-88756059 Msa0435570:CDS 55.0%
CGGAGATGTGGATGTTGCAC+TGG + chr3_2:88757338-88757357 Msa0435570:intron 55.0%
! AAAAGTTCTGGCAAGGGCCG+GGG + chr3_2:88758864-88758883 Msa0435570:CDS 55.0%
ACCCTCAGACTCCGACACTT+TGG - chr3_2:88758898-88758917 None:intergenic 55.0%
GTGTCGGAGTCTGAGGGTAA+AGG + chr3_2:88758900-88758919 Msa0435570:CDS 55.0%
GAGTCTGAGGGTAAAGGCTC+TGG + chr3_2:88758906-88758925 Msa0435570:CDS 55.0%
! AGGTCACCAGCCGCTGATTA+AGG - chr3_2:88759210-88759229 None:intergenic 55.0%
TTAATCAGCGGCTGGTGACC+TGG + chr3_2:88759209-88759228 Msa0435570:three_prime_UTR 55.0%
GCCACGTGCTGGGATATCGT+TGG + chr3_2:88752431-88752450 Msa0435570:CDS 60.0%
TGCTGATGCCGACGAGAGGA+CGG - chr3_2:88752505-88752524 None:intergenic 60.0%
CGAATGCTGATGCCGACGAG+AGG - chr3_2:88752509-88752528 None:intergenic 60.0%
CGATACGTTGCATCGGGCTG+CGG + chr3_2:88752527-88752546 Msa0435570:CDS 60.0%
TGCCCAAGCTGCCCATACTG+TGG - chr3_2:88753717-88753736 None:intergenic 60.0%
CAGTATGGGCAGCTTGGGCA+TGG + chr3_2:88753717-88753736 Msa0435570:CDS 60.0%
GCTAGGACATCGGGAGCAGA+AGG + chr3_2:88754981-88755000 Msa0435570:CDS 60.0%
TCGTCGCAAAGGTCCTGCCG+AGG + chr3_2:88752454-88752473 Msa0435570:CDS 65.0%
CGTCGCAAAGGTCCTGCCGA+GGG + chr3_2:88752455-88752474 Msa0435570:CDS 65.0%
TGATGCCGACGAGAGGACGG+AGG - chr3_2:88752502-88752521 None:intergenic 65.0%
TTCTGGCAAGGGCCGGGGTA+AGG + chr3_2:88758869-88758888 Msa0435570:CDS 65.0%
! GAGGGTAAAGGCTCTGGCCG+AGG + chr3_2:88758912-88758931 Msa0435570:CDS 65.0%
! AAAGGCTCTGGCCGAGGACG+TGG + chr3_2:88758918-88758937 Msa0435570:CDS 65.0%
ACGAGAGGACGGAGGCGGGA+AGG - chr3_2:88752494-88752513 None:intergenic 70.0%
TCCCGCCTCCGTCCTCTCGT+CGG + chr3_2:88752494-88752513 Msa0435570:CDS 70.0%
TGCCGACGAGAGGACGGAGG+CGG - chr3_2:88752499-88752518 None:intergenic 70.0%
! CAGGAGCGCGACCACGTCCT+CGG - chr3_2:88758932-88758951 None:intergenic 70.0%
GCCGACGAGAGGACGGAGGC+GGG - chr3_2:88752498-88752517 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 88752117 88759324 88752117 ID=Msa0435570;Name=Msa0435570
chr3_2 mRNA 88752117 88759324 88752117 ID=Msa0435570-mRNA-1;Parent=Msa0435570;Name=Msa0435570-mRNA-1;_AED=0.09;_eAED=0.09;_QI=236|1|1|1|1|1|16|302|543
chr3_2 exon 88752117 88752548 88752117 ID=Msa0435570-mRNA-1:exon:26153;Parent=Msa0435570-mRNA-1
chr3_2 exon 88752689 88752750 88752689 ID=Msa0435570-mRNA-1:exon:26154;Parent=Msa0435570-mRNA-1
chr3_2 exon 88752840 88752907 88752840 ID=Msa0435570-mRNA-1:exon:26155;Parent=Msa0435570-mRNA-1
chr3_2 exon 88753090 88753211 88753090 ID=Msa0435570-mRNA-1:exon:26156;Parent=Msa0435570-mRNA-1
chr3_2 exon 88753472 88753577 88753472 ID=Msa0435570-mRNA-1:exon:26157;Parent=Msa0435570-mRNA-1
chr3_2 exon 88753701 88753752 88753701 ID=Msa0435570-mRNA-1:exon:26158;Parent=Msa0435570-mRNA-1
chr3_2 exon 88754511 88754628 88754511 ID=Msa0435570-mRNA-1:exon:26159;Parent=Msa0435570-mRNA-1
chr3_2 exon 88754706 88754736 88754706 ID=Msa0435570-mRNA-1:exon:26160;Parent=Msa0435570-mRNA-1
chr3_2 exon 88754824 88754847 88754824 ID=Msa0435570-mRNA-1:exon:26161;Parent=Msa0435570-mRNA-1
chr3_2 exon 88754981 88755105 88754981 ID=Msa0435570-mRNA-1:exon:26162;Parent=Msa0435570-mRNA-1
chr3_2 exon 88755739 88755820 88755739 ID=Msa0435570-mRNA-1:exon:26163;Parent=Msa0435570-mRNA-1
chr3_2 exon 88755946 88756068 88755946 ID=Msa0435570-mRNA-1:exon:26164;Parent=Msa0435570-mRNA-1
chr3_2 exon 88756143 88756196 88756143 ID=Msa0435570-mRNA-1:exon:26165;Parent=Msa0435570-mRNA-1
chr3_2 exon 88756904 88756973 88756904 ID=Msa0435570-mRNA-1:exon:26166;Parent=Msa0435570-mRNA-1
chr3_2 exon 88758206 88758239 88758206 ID=Msa0435570-mRNA-1:exon:26167;Parent=Msa0435570-mRNA-1
chr3_2 exon 88758658 88759324 88758658 ID=Msa0435570-mRNA-1:exon:26168;Parent=Msa0435570-mRNA-1
chr3_2 five_prime_UTR 88752117 88752352 88752117 ID=Msa0435570-mRNA-1:five_prime_utr;Parent=Msa0435570-mRNA-1
chr3_2 CDS 88752353 88752548 88752353 ID=Msa0435570-mRNA-1:cds;Parent=Msa0435570-mRNA-1
chr3_2 CDS 88752689 88752750 88752689 ID=Msa0435570-mRNA-1:cds;Parent=Msa0435570-mRNA-1
chr3_2 CDS 88752840 88752907 88752840 ID=Msa0435570-mRNA-1:cds;Parent=Msa0435570-mRNA-1
chr3_2 CDS 88753090 88753211 88753090 ID=Msa0435570-mRNA-1:cds;Parent=Msa0435570-mRNA-1
chr3_2 CDS 88753472 88753577 88753472 ID=Msa0435570-mRNA-1:cds;Parent=Msa0435570-mRNA-1
chr3_2 CDS 88753701 88753752 88753701 ID=Msa0435570-mRNA-1:cds;Parent=Msa0435570-mRNA-1
chr3_2 CDS 88754511 88754628 88754511 ID=Msa0435570-mRNA-1:cds;Parent=Msa0435570-mRNA-1
chr3_2 CDS 88754706 88754736 88754706 ID=Msa0435570-mRNA-1:cds;Parent=Msa0435570-mRNA-1
chr3_2 CDS 88754824 88754847 88754824 ID=Msa0435570-mRNA-1:cds;Parent=Msa0435570-mRNA-1
chr3_2 CDS 88754981 88755105 88754981 ID=Msa0435570-mRNA-1:cds;Parent=Msa0435570-mRNA-1
chr3_2 CDS 88755739 88755820 88755739 ID=Msa0435570-mRNA-1:cds;Parent=Msa0435570-mRNA-1
chr3_2 CDS 88755946 88756068 88755946 ID=Msa0435570-mRNA-1:cds;Parent=Msa0435570-mRNA-1
chr3_2 CDS 88756143 88756196 88756143 ID=Msa0435570-mRNA-1:cds;Parent=Msa0435570-mRNA-1
chr3_2 CDS 88756904 88756973 88756904 ID=Msa0435570-mRNA-1:cds;Parent=Msa0435570-mRNA-1
chr3_2 CDS 88758206 88758239 88758206 ID=Msa0435570-mRNA-1:cds;Parent=Msa0435570-mRNA-1
chr3_2 CDS 88758658 88759022 88758658 ID=Msa0435570-mRNA-1:cds;Parent=Msa0435570-mRNA-1
chr3_2 three_prime_UTR 88759023 88759324 88759023 ID=Msa0435570-mRNA-1:three_prime_utr;Parent=Msa0435570-mRNA-1
Gene Sequence

>Msa0435570

ATGTCTACATCAGAAGTTGAGAAGAAGGTCGAGGAAGAGAATCAAGCTCCCAAAGGAGGTGAACTCTTGTTTTGTGGTGCCACGTGCTGGGATATCGTTGGTCGTCGCAAAGGTCCTGCCGAGGGTAATTTGGTCTCTCCTTCCCGCCTCCGTCCTCTCGTCGGCATCAGCATTCGATACGTTGCATCGGGCTGCGCTTCGTGTCATTGCGTGGCATTGGACGTTGAAGGGCGTTGCTATACATGGGGGCGTAATGAGAAAGGGCAACTGGGTCATGGAGATACCATTCAGCGTGATAGGCCAACTGTGGTTTCTGAACTTTCAAAATACAAAATTGTTCAAGCTGGAGCTGGGAAGAGCCATACTGTAGTTGTTACAGAGGATGGAAATTCCCTAGCATTTGGATGGAACAAACATGGACAGCTAGGTTCCGGTTCTGCAAAAACTGAAATTGAATCATCCCCTATTCGCTGTCTTGTGTCGGAAGTTACATATGCTACATGTGGTGGCGACTTTTCTGTGTGGCTATCTTCAGTCGAAGGATCTTCTATACTGACTGCTGGGCTTCCACAGTATGGGCAGCTTGGGCATGGAACAGATAACGAGTATAATTCCAAAGACAGTTCTGTGAAATTAGTTTATGAAGCACAGCCACGTCCTCGAGCAATAGCTTCCCTTGCTGGGGAAACCATTGTCAAGGTGGCATGTGGAACAAATCATACAGTGGCGGTGGATAAGAATGGTTTTGTCTACACGTGGGGTTATGGTGGTTATGGAAGGCTAGGACATCGGGAGCAGAAGGATGAATTCGCTCCACGCCGTGTTGATATTTTCACGAATAGAAACGTGTTGCCTCCTGATGCAATTATTTCAGCAGGTTCTGTGAATTCTGCTTGTACTGCAGCTGGAGGGCAGCTGTATATGTGGGGCAAAATAAAGAACACCGGTGATGACTGGATGTACCCTAAGCCTCTAATGGATTTAAGCGGTTGGAATATACGATGCATGGATTCAGGGGGTATGCACCATTTTGTTGGGGCTGATTCCTCGTGCATAAGTTGGGGTCATGCTCAGAATGGAGAGCTGGGATACGGACCTAATGGACAGAAGTCTTCAGCTGTTCCCAAGAAGGTGGATATACTTGAGGGTATGCATGTAATGAGTGTTGCTTGTGGTTTGGGTCATTCCATGGTTGTGGTTGACAGAGCAAATATTGCTGATAGACTTGATCAGCTTGATACACATGATGGCAAAGCTGTTGGTGAAGGTAATGAGACCGTGAATAAAACTCAAGTGCCTAAAAAGGCGGCACCAAAAAAAGGTGCAACTGCAAAGAAAGCTGACAGCTCAAAGAAGAGGAAAAAAGCAAAAGATGCATCTGACTCAGAAGAAGAGCAAGAAGAGGCTGAAGAAAGTGACAATAGCGAGGATGAAGTTAATGGTGAGGCTGAGGTTAAAACATCACGTGGTGGAAAAAGTTCTGGCAAGGGCCGGGGTAAGGCATCCAAAGTGTCGGAGTCTGAGGGTAAAGGCTCTGGCCGAGGACGTGGTCGCGCTCCTGCAAATAACAGCAGTTCTAAATCTTCTCCAGTGAAGTCAACTGGTAAGAGAGGAAGACCCAGAAAGTCATGA
Protein sequence

>Msa0435570

MSTSEVEKKVEEENQAPKGGELLFCGATCWDIVGRRKGPAEGNLVSPSRLRPLVGISIRYVASGCASCHCVALDVEGRCYTWGRNEKGQLGHGDTIQRDRPTVVSELSKYKIVQAGAGKSHTVVVTEDGNSLAFGWNKHGQLGSGSAKTEIESSPIRCLVSEVTYATCGGDFSVWLSSVEGSSILTAGLPQYGQLGHGTDNEYNSKDSSVKLVYEAQPRPRAIASLAGETIVKVACGTNHTVAVDKNGFVYTWGYGGYGRLGHREQKDEFAPRRVDIFTNRNVLPPDAIISAGSVNSACTAAGGQLYMWGKIKNTGDDWMYPKPLMDLSGWNIRCMDSGGMHHFVGADSSCISWGHAQNGELGYGPNGQKSSAVPKKVDILEGMHVMSVACGLGHSMVVVDRANIADRLDQLDTHDGKAVGEGNETVNKTQVPKKAAPKKGATAKKADSSKKRKKAKDASDSEEEQEEAEESDNSEDEVNGEAEVKTSRGGKSSGKGRGKASKVSESEGKGSGRGRGRAPANNSSSKSSPVKSTGKRGRPRKS*