Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0640840 | XP_013455695.1 | 97.321 | 448 | 10 | 2 | 1 | 447 | 1 | 447 | 0.0 | 891 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0640840 | sp|Q66GR0|FLA17_ARATH | 71.047 | 449 | 115 | 5 | 3 | 447 | 1 | 438 | 0.0 | 577 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0640840 | A0A072UJX8 | 97.321 | 448 | 10 | 2 | 1 | 447 | 1 | 447 | 0.0 | 891 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0623900 | Msa0640840 | 0.837928 | 3.891007e-57 | -8.615850e-47 |
| Msa0623910 | Msa0640840 | 0.838485 | 2.796976e-57 | -8.615850e-47 |
| Msa0640840 | Msa0679230 | 0.887873 | 9.729740e-73 | -8.615850e-47 |
| Msa0640840 | Msa0681260 | 0.810025 | 1.415156e-50 | -8.615850e-47 |
| Msa0640840 | Msa0681280 | 0.803104 | 4.087564e-49 | -8.615850e-47 |
| Msa0640840 | Msa1175430 | 0.801731 | 7.839761e-49 | -8.615850e-47 |
| Msa0176900 | Msa0640840 | 0.815802 | 7.671594e-52 | -8.615850e-47 |
| Msa0544480 | Msa0640840 | 0.916007 | 2.987703e-85 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0640840 | MtrunA17_Chr4g0025311 | 97.321 | 448 | 10 | 2 | 1 | 447 | 1 | 447 | 0.0 | 891 |
| Msa0640840 | MtrunA17_Chr2g0322251 | 72.506 | 411 | 101 | 5 | 39 | 447 | 26 | 426 | 0.0 | 555 |
| Msa0640840 | MtrunA17_Chr7g0267811 | 75.787 | 413 | 92 | 6 | 37 | 447 | 27 | 433 | 0.0 | 553 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0640840 | AT5G06390.1 | 71.047 | 449 | 115 | 5 | 3 | 447 | 1 | 438 | 0.0 | 577 |
| Msa0640840 | AT2G35860.1 | 75.795 | 409 | 86 | 5 | 41 | 447 | 33 | 430 | 0.0 | 570 |
| Msa0640840 | AT3G52370.2 | 74.510 | 408 | 88 | 4 | 41 | 447 | 82 | 474 | 0.0 | 560 |
| Msa0640840 | AT3G52370.1 | 74.510 | 408 | 88 | 4 | 41 | 447 | 29 | 421 | 0.0 | 556 |
| Msa0640840 | AT3G11700.1 | 69.095 | 453 | 122 | 5 | 3 | 447 | 1 | 443 | 0.0 | 553 |
| Msa0640840 | AT5G05650.1 | 58.696 | 92 | 34 | 1 | 325 | 416 | 2 | 89 | 4.23e-32 | 119 |
Find 143 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGGTTTACCCTTCCGTTCT+TGG | 0.196546 | 4_3:-40218578 | None:intergenic |
| TATAATGCTGTTAGAAGATT+TGG | 0.205388 | 4_3:+40218351 | Msa0640840:CDS |
| ATTCAAACACTGATACATTA+TGG | 0.268025 | 4_3:+40218114 | Msa0640840:CDS |
| ATCAACCTCCGGTGCACCTT+CGG | 0.276459 | 4_3:-40217700 | None:intergenic |
| GCCATGGATTGCGGCATCTA+TGG | 0.291024 | 4_3:+40217081 | Msa0640840:CDS |
| TAACGAGATGGCGGATATTC+TGG | 0.301192 | 4_3:+40218143 | Msa0640840:CDS |
| TCGCAACAATGGTTGGTTAA+TGG | 0.312344 | 4_3:+40217540 | Msa0640840:CDS |
| GTTTGACCCGGATATTTATA+CGG | 0.315626 | 4_3:+40218473 | Msa0640840:CDS |
| TGATTAAGAGGAGTTTGTTT+AGG | 0.340226 | 4_3:-40216875 | None:intergenic |
| GCTGATGGGTCGGTTAAATT+CGG | 0.358905 | 4_3:+40218426 | Msa0640840:CDS |
| TTAGCCATAGCTTCATCATT+TGG | 0.365438 | 4_3:-40218237 | None:intergenic |
| ATTGGCTCCTGGACCTTCTC+TGG | 0.374989 | 4_3:+40217800 | Msa0640840:CDS |
| TCAACCTCCGGTGCACCTTC+GGG | 0.377012 | 4_3:-40217699 | None:intergenic |
| CTCCCATCCGTATAAATATC+CGG | 0.383323 | 4_3:-40218480 | None:intergenic |
| CAACGCACCTCTTCTTTGCT+TGG | 0.384525 | 4_3:-40218613 | None:intergenic |
| CCATTACCTGGTGCTGGCGC+CGG | 0.386857 | 4_3:-40217825 | None:intergenic |
| AAAAGAAGAGGTTGTTGATA+AGG | 0.389174 | 4_3:+40218548 | Msa0640840:CDS |
| ACATAAACACAGGTAGCATT+TGG | 0.391397 | 4_3:+40217011 | Msa0640840:five_prime_UTR |
| GGGTTTACCCTTCCGTTCTT+GGG | 0.397284 | 4_3:-40218577 | None:intergenic |
| AGAGATGAATGATTGTTAAA+TGG | 0.399396 | 4_3:-40216922 | None:intergenic |
| CCGCCACCACCGCAGAAGCC+TGG | 0.404968 | 4_3:+40217747 | Msa0640840:CDS |
| GACCCCACCATCATTTCAAC+GGG | 0.406272 | 4_3:+40218070 | Msa0640840:CDS |
| ATTTCTGTGCAAGGGATTGA+TGG | 0.408807 | 4_3:+40218504 | Msa0640840:CDS |
| TGATAGTACATAATTTGTTC+CGG | 0.408846 | 4_3:-40218294 | None:intergenic |
| GGTTGCATTGTGAAAGTCTA+AGG | 0.411365 | 4_3:-40216795 | None:intergenic |
| GTGAACCCGGTTCACTCAAC+TGG | 0.414386 | 4_3:-40218272 | None:intergenic |
| AGACCTGATGGTGTTATTCA+TGG | 0.414707 | 4_3:+40217594 | Msa0640840:CDS |
| TGAGCATCAGTTATTGATAC+AGG | 0.416686 | 4_3:+40217506 | Msa0640840:CDS |
| TCTTCAGCATCAACCTTATG+AGG | 0.417041 | 4_3:-40218402 | None:intergenic |
| ATTCGGGCATGGTGATGGTT+CGG | 0.423960 | 4_3:+40218443 | Msa0640840:CDS |
| ATAATGCTGTTAGAAGATTT+GGG | 0.425540 | 4_3:+40218352 | Msa0640840:CDS |
| AACGGACCAGTTGAGTGAAC+CGG | 0.429059 | 4_3:+40218266 | Msa0640840:CDS |
| TGCTTGGCCACAACCTTAGC+GGG | 0.430153 | 4_3:-40218597 | None:intergenic |
| TCGGGTCGACCCGCCTTTGT+TGG | 0.439908 | 4_3:-40217466 | None:intergenic |
| GGAAGAGCAGGCGGAGAGCC+AGG | 0.439938 | 4_3:-40217765 | None:intergenic |
| AAGGGCCAGGTAGTAGAAGT+TGG | 0.443617 | 4_3:+40216690 | Msa0640840:five_prime_UTR |
| CTGGCACCGGCGCCAGCACC+AGG | 0.447448 | 4_3:+40217819 | Msa0640840:CDS |
| CTCTCTTCAGTTTGATACTC+AGG | 0.448810 | 4_3:-40218324 | None:intergenic |
| ATCTTCATCTTCTTCTTCAA+CGG | 0.450047 | 4_3:+40217173 | Msa0640840:CDS |
| CAAGATCTCGTTCTAGAGCT+TGG | 0.454955 | 4_3:-40217341 | None:intergenic |
| CAGATCCATTGATTCGTGTT+GGG | 0.457295 | 4_3:-40217440 | None:intergenic |
| GTTTGTTTAGGTGGTAATGC+TGG | 0.461023 | 4_3:-40216863 | None:intergenic |
| GTTAAATTCGGGCATGGTGA+TGG | 0.463040 | 4_3:+40218438 | Msa0640840:CDS |
| TGAAGAGATTTAAGATTTCG+TGG | 0.464244 | 4_3:-40217393 | None:intergenic |
| CCAGGCTTCTGCGGTGGTGG+CGG | 0.467825 | 4_3:-40217747 | None:intergenic |
| GATGAGTAGGTTAGTATCAG+AGG | 0.468619 | 4_3:+40218191 | Msa0640840:CDS |
| TCCTGGACCTTCTCTGGCAC+CGG | 0.471775 | 4_3:+40217806 | Msa0640840:CDS |
| ACGTGGCGGGGTATGATTGA+AGG | 0.478943 | 4_3:-40216770 | None:intergenic |
| GAGCCAGGCTTCTGCGGTGG+TGG | 0.479008 | 4_3:-40217750 | None:intergenic |
| TTGTTAATTTGGTGATTAAG+AGG | 0.484592 | 4_3:-40216887 | None:intergenic |
| CTGATGGGTCGGTTAAATTC+GGG | 0.490096 | 4_3:+40218427 | Msa0640840:CDS |
| ATTCCATGAATAACACCATC+AGG | 0.490128 | 4_3:-40217597 | None:intergenic |
| TACACTGAGATTGCCTCATA+AGG | 0.490412 | 4_3:+40218389 | Msa0640840:CDS |
| ATTATCCCAACACGAATCAA+TGG | 0.495473 | 4_3:+40217435 | Msa0640840:CDS |
| AGGGCCAGGTAGTAGAAGTT+GGG | 0.498425 | 4_3:+40216691 | Msa0640840:five_prime_UTR |
| TTTCTGTGCAAGGGATTGAT+GGG | 0.500163 | 4_3:+40218505 | Msa0640840:CDS |
| TAAGATTTCGTGGCTCTAAG+AGG | 0.500509 | 4_3:-40217383 | None:intergenic |
| AAGCGACAATGTTCTATGTC+GGG | 0.503585 | 4_3:-40217484 | None:intergenic |
| ACAGATCCATTGATTCGTGT+TGG | 0.507168 | 4_3:-40217441 | None:intergenic |
| TTGAAAGGCTTCTTATTCCA+AGG | 0.507843 | 4_3:+40217619 | Msa0640840:CDS |
| AAGCTTCCATTACCTGGTGC+TGG | 0.507955 | 4_3:-40217831 | None:intergenic |
| GACCCGGATATTTATACGGA+TGG | 0.509583 | 4_3:+40218477 | Msa0640840:CDS |
| CAACGGGGAGGCACAGGTGA+AGG | 0.509640 | 4_3:+40218086 | Msa0640840:CDS |
| GGGTAAACCCGCTAAGGTTG+TGG | 0.515104 | 4_3:+40218590 | Msa0640840:CDS |
| AAAGTCTAAGGACACGTGGC+GGG | 0.517954 | 4_3:-40216783 | None:intergenic |
| GGCGGAGAGCCAGGCTTCTG+CGG | 0.518421 | 4_3:-40217756 | None:intergenic |
| CTCTCCCAACTTCTACTACC+TGG | 0.518428 | 4_3:-40216695 | None:intergenic |
| GTGTTATTCATGGAATTGAA+AGG | 0.521049 | 4_3:+40217604 | Msa0640840:CDS |
| ACCATAGATGCCGCAATCCA+TGG | 0.521880 | 4_3:-40217082 | None:intergenic |
| AGCACCAAATGATGAAGCTA+TGG | 0.522967 | 4_3:+40218233 | Msa0640840:CDS |
| AAATGATGGTGGGGTCCACC+AGG | 0.523892 | 4_3:-40218063 | None:intergenic |
| GCTGGCGCCGGTGCCAGAGA+AGG | 0.527163 | 4_3:-40217813 | None:intergenic |
| ATAATTTGTTCCGGTGAACC+CGG | 0.528069 | 4_3:-40218285 | None:intergenic |
| CAAGCGACAATGTTCTATGT+CGG | 0.531194 | 4_3:-40217485 | None:intergenic |
| TTGCTTGGCCACAACCTTAG+CGG | 0.531460 | 4_3:-40218598 | None:intergenic |
| TTCGGCTTATTTGTTTGACC+CGG | 0.531979 | 4_3:+40218461 | Msa0640840:CDS |
| ATGAGTAGGTTAGTATCAGA+GGG | 0.533753 | 4_3:+40218192 | Msa0640840:CDS |
| GTGCCTCCCCGTTGAAATGA+TGG | 0.534564 | 4_3:-40218077 | None:intergenic |
| ACCCGGATATTTATACGGAT+GGG | 0.536086 | 4_3:+40218478 | Msa0640840:CDS |
| GTTGAGTGAACCGGGTTCAC+CGG | 0.536161 | 4_3:+40218275 | Msa0640840:CDS |
| GGCTGTGACCCAAGAACGGA+AGG | 0.537283 | 4_3:+40218569 | Msa0640840:CDS |
| TCCCATCCGTATAAATATCC+GGG | 0.540655 | 4_3:-40218479 | None:intergenic |
| TTAAGAGGAGTTTGTTTAGG+TGG | 0.541132 | 4_3:-40216872 | None:intergenic |
| AAGTCATCTTGAACAGACCT+TGG | 0.542381 | 4_3:-40217636 | None:intergenic |
| TTTACCGACAGTGTCTTCTA+GGG | 0.544508 | 4_3:-40217289 | None:intergenic |
| TGAAACATCGCAACAATGGT+TGG | 0.551947 | 4_3:+40217533 | Msa0640840:CDS |
| CTCCCCGTTGAAATGATGGT+GGG | 0.553409 | 4_3:-40218073 | None:intergenic |
| TCATTTCAACGGGGAGGCAC+AGG | 0.554998 | 4_3:+40218080 | Msa0640840:CDS |
| TGAGTCCTCGGATCAACCTC+CGG | 0.557499 | 4_3:-40217711 | None:intergenic |
| TTAGAAGATTTGGGAAGGTG+AGG | 0.560046 | 4_3:+40218361 | Msa0640840:CDS |
| GCCGGTGCCAGAGAAGGTCC+AGG | 0.566022 | 4_3:-40217807 | None:intergenic |
| TTCTGTGCAAGGGATTGATG+GGG | 0.568281 | 4_3:+40218506 | Msa0640840:CDS |
| GGACCCCACCATCATTTCAA+CGG | 0.574499 | 4_3:+40218069 | Msa0640840:CDS |
| CGTGGCGGGGTATGATTGAA+GGG | 0.575222 | 4_3:-40216769 | None:intergenic |
| TATTAAACCCGAAGGTGCAC+CGG | 0.577158 | 4_3:+40217692 | Msa0640840:CDS |
| ACGGACCAGTTGAGTGAACC+GGG | 0.578352 | 4_3:+40218267 | Msa0640840:CDS |
| ATGGGAGGATTTCTGTGCAA+GGG | 0.579676 | 4_3:+40218496 | Msa0640840:CDS |
| TGCTGTTAGAAGATTTGGGA+AGG | 0.581041 | 4_3:+40218356 | Msa0640840:CDS |
| CAAATGAAACATCGCAACAA+TGG | 0.583491 | 4_3:+40217529 | Msa0640840:CDS |
| ACGGAAGGGTAAACCCGCTA+AGG | 0.584103 | 4_3:+40218584 | Msa0640840:CDS |
| TTGAACTAGGAGTTGAGTGT+GGG | 0.586235 | 4_3:-40216726 | None:intergenic |
| ATGGGTAAATTAAGAAGTGT+CGG | 0.587677 | 4_3:-40216816 | None:intergenic |
| GAACTTAACGTCGTTAGCGA+CGG | 0.595166 | 4_3:+40218167 | Msa0640840:CDS |
| GATCTGTATCCAACAAAGGC+GGG | 0.596886 | 4_3:+40217457 | Msa0640840:CDS |
| CCTCCCCGTTGAAATGATGG+TGG | 0.597615 | 4_3:-40218074 | None:intergenic |
| AGGTTGATCCGAGGACTCAT+CGG | 0.600481 | 4_3:+40217715 | Msa0640840:CDS |
| GGGTCGGTTAAATTCGGGCA+TGG | 0.604050 | 4_3:+40218432 | Msa0640840:CDS |
| GGAGAGCCAGGCTTCTGCGG+TGG | 0.606784 | 4_3:-40217753 | None:intergenic |
| ATGATTGAAGGGGAAGAGTG+CGG | 0.612828 | 4_3:-40216758 | None:intergenic |
| TTATGGAGGTTATAACGAGA+TGG | 0.617430 | 4_3:+40218131 | Msa0640840:CDS |
| CGTTAGCGACGGAGATGAGT+AGG | 0.618054 | 4_3:+40218178 | Msa0640840:CDS |
| GATGGGAGGATTTCTGTGCA+AGG | 0.618422 | 4_3:+40218495 | Msa0640840:CDS |
| CGGATATTTATACGGATGGG+AGG | 0.627609 | 4_3:+40218481 | Msa0640840:CDS |
| TCCCCGTTGAAATGATGGTG+GGG | 0.631232 | 4_3:-40218072 | None:intergenic |
| ATAAGGCTGTGACCCAAGAA+CGG | 0.632729 | 4_3:+40218565 | Msa0640840:CDS |
| ATTGCTGCTATTAAACCCGA+AGG | 0.637813 | 4_3:+40217684 | Msa0640840:CDS |
| GTTGATGCTGAAGAAGCTGA+TGG | 0.639771 | 4_3:+40218411 | Msa0640840:CDS |
| AAGATGACTTTAACCGTCGT+AGG | 0.641102 | 4_3:+40217649 | Msa0640840:CDS |
| GGATCTGTATCCAACAAAGG+CGG | 0.643730 | 4_3:+40217456 | Msa0640840:CDS |
| TAGAAACAAGACTCCTACGA+CGG | 0.647653 | 4_3:-40217662 | None:intergenic |
| TAAACCCGAAGGTGCACCGG+AGG | 0.651738 | 4_3:+40217695 | Msa0640840:CDS |
| GCGGTGTGTGACATTGAACT+AGG | 0.652046 | 4_3:-40216739 | None:intergenic |
| AATGATGTTACAAGACCTGA+TGG | 0.654239 | 4_3:+40217582 | Msa0640840:CDS |
| GAAAGTCTAAGGACACGTGG+CGG | 0.661619 | 4_3:-40216784 | None:intergenic |
| AATGGATCTGTATCCAACAA+AGG | 0.662344 | 4_3:+40217453 | Msa0640840:CDS |
| TGCTGAAGAAGCTGATGGGT+CGG | 0.664468 | 4_3:+40218416 | Msa0640840:CDS |
| ATTGAACTAGGAGTTGAGTG+TGG | 0.666024 | 4_3:-40216727 | None:intergenic |
| GTTGTGGCCAAGCAAAGAAG+AGG | 0.666635 | 4_3:+40218606 | Msa0640840:CDS |
| TTGATGCTGAAGAAGCTGAT+GGG | 0.675714 | 4_3:+40218412 | Msa0640840:CDS |
| CAAACACTGATACATTATGG+AGG | 0.675816 | 4_3:+40218117 | Msa0640840:CDS |
| CCACCATCATTTCAACGGGG+AGG | 0.679312 | 4_3:+40218074 | Msa0640840:CDS |
| ATAAACATAAACATAAACAC+AGG | 0.685540 | 4_3:+40217001 | Msa0640840:five_prime_UTR |
| TGAACTAGGAGTTGAGTGTG+GGG | 0.692022 | 4_3:-40216725 | None:intergenic |
| AAGTCTAAGGACACGTGGCG+GGG | 0.692142 | 4_3:-40216782 | None:intergenic |
| GTGGCGGGGTATGATTGAAG+GGG | 0.693098 | 4_3:-40216768 | None:intergenic |
| TGGAGGTTATAACGAGATGG+CGG | 0.695354 | 4_3:+40218134 | Msa0640840:CDS |
| AGCTATGGCTAAGTTAACAA+CGG | 0.711535 | 4_3:+40218248 | Msa0640840:CDS |
| AAGTGAAGAAGAAGAACGTG+CGG | 0.711745 | 4_3:-40217122 | None:intergenic |
| TGTGAAAGTCTAAGGACACG+TGG | 0.716335 | 4_3:-40216787 | None:intergenic |
| GTGCACCGGAGGTTGATCCG+AGG | 0.717893 | 4_3:+40217706 | Msa0640840:CDS |
| CAGACCCTAGAAGACACTGT+CGG | 0.726437 | 4_3:+40217285 | Msa0640840:CDS |
| GCTGTGACCCAAGAACGGAA+GGG | 0.741038 | 4_3:+40218570 | Msa0640840:CDS |
| ACCCCACCATCATTTCAACG+GGG | 0.810320 | 4_3:+40218071 | Msa0640840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTTTTTTTAATCTTTG+GGG | - | chr4_3:40216843-40216862 | None:intergenic | 15.0% |
| !!! | GTTTTGTTTTTTTAATCTTT+GGG | - | chr4_3:40216844-40216863 | None:intergenic | 15.0% |
| !!! | TTTTGTTTTTTTAATCTTTG+GGG | - | chr4_3:40216843-40216862 | None:intergenic | 15.0% |
| !!! | GTTTTGTTTTTTTAATCTTT+GGG | - | chr4_3:40216844-40216863 | None:intergenic | 15.0% |
| !!! | GGTTTTGTTTTTTTAATCTT+TGG | - | chr4_3:40216845-40216864 | None:intergenic | 20.0% |
| !! | ATAAACATAAACATAAACAC+AGG | + | chr4_3:40217001-40217020 | Msa0640840:five_prime_UTR | 20.0% |
| !! | AAAACCAAAACCTTAAAAAA+TGG | + | chr4_3:40217059-40217078 | Msa0640840:exon | 20.0% |
| !! | TTGAATATAATCAGATGTAT+TGG | - | chr4_3:40217942-40217961 | None:intergenic | 20.0% |
| !!! | GGTTTTGTTTTTTTAATCTT+TGG | - | chr4_3:40216845-40216864 | None:intergenic | 20.0% |
| !! | ATAAACATAAACATAAACAC+AGG | + | chr4_3:40217001-40217020 | Msa0640840:five_prime_UTR | 20.0% |
| !! | AAAACCAAAACCTTAAAAAA+TGG | + | chr4_3:40217059-40217078 | Msa0640840:exon | 20.0% |
| !! | TTGAATATAATCAGATGTAT+TGG | - | chr4_3:40217942-40217961 | None:intergenic | 20.0% |
| !!! | TTTTTTAATCTTTGGGGTAT+GGG | - | chr4_3:40216837-40216856 | None:intergenic | 25.0% |
| !!! | TTTTTTTAATCTTTGGGGTA+TGG | - | chr4_3:40216838-40216857 | None:intergenic | 25.0% |
| !! | TTGTTAATTTGGTGATTAAG+AGG | - | chr4_3:40216890-40216909 | None:intergenic | 25.0% |
| !!! | GTTTTGTTGTGTTGTTAATT+TGG | - | chr4_3:40216901-40216920 | None:intergenic | 25.0% |
| ! | AGAGATGAATGATTGTTAAA+TGG | - | chr4_3:40216925-40216944 | None:intergenic | 25.0% |
| !!! | AGAGGAAAGTTTTGAAATTT+GGG | - | chr4_3:40217368-40217387 | None:intergenic | 25.0% |
| !!! | AAGAGGAAAGTTTTGAAATT+TGG | - | chr4_3:40217369-40217388 | None:intergenic | 25.0% |
| !!! | TTGTAACTAACTTGTTTTTC+AGG | + | chr4_3:40218039-40218058 | Msa0640840:intron | 25.0% |
| ! | ATTCAAACACTGATACATTA+TGG | + | chr4_3:40218114-40218133 | Msa0640840:CDS | 25.0% |
| !!! | TGATAGTACATAATTTGTTC+CGG | - | chr4_3:40218297-40218316 | None:intergenic | 25.0% |
| ! | TATAATGCTGTTAGAAGATT+TGG | + | chr4_3:40218351-40218370 | Msa0640840:CDS | 25.0% |
| ! | ATAATGCTGTTAGAAGATTT+GGG | + | chr4_3:40218352-40218371 | Msa0640840:CDS | 25.0% |
| !!! | TTTTTTAATCTTTGGGGTAT+GGG | - | chr4_3:40216837-40216856 | None:intergenic | 25.0% |
| !!! | TTTTTTTAATCTTTGGGGTA+TGG | - | chr4_3:40216838-40216857 | None:intergenic | 25.0% |
| !! | TTGTTAATTTGGTGATTAAG+AGG | - | chr4_3:40216890-40216909 | None:intergenic | 25.0% |
| !!! | GTTTTGTTGTGTTGTTAATT+TGG | - | chr4_3:40216901-40216920 | None:intergenic | 25.0% |
| ! | AGAGATGAATGATTGTTAAA+TGG | - | chr4_3:40216925-40216944 | None:intergenic | 25.0% |
| !!! | AGAGGAAAGTTTTGAAATTT+GGG | - | chr4_3:40217368-40217387 | None:intergenic | 25.0% |
| !!! | AAGAGGAAAGTTTTGAAATT+TGG | - | chr4_3:40217369-40217388 | None:intergenic | 25.0% |
| !!! | TTGTAACTAACTTGTTTTTC+AGG | + | chr4_3:40218039-40218058 | Msa0640840:intron | 25.0% |
| ! | ATTCAAACACTGATACATTA+TGG | + | chr4_3:40218114-40218133 | Msa0640840:CDS | 25.0% |
| !!! | TGATAGTACATAATTTGTTC+CGG | - | chr4_3:40218297-40218316 | None:intergenic | 25.0% |
| ! | TATAATGCTGTTAGAAGATT+TGG | + | chr4_3:40218351-40218370 | Msa0640840:CDS | 25.0% |
| ! | ATAATGCTGTTAGAAGATTT+GGG | + | chr4_3:40218352-40218371 | Msa0640840:CDS | 25.0% |
| ! | ATGGGTAAATTAAGAAGTGT+CGG | - | chr4_3:40216819-40216838 | None:intergenic | 30.0% |
| ! | TGATTAAGAGGAGTTTGTTT+AGG | - | chr4_3:40216878-40216897 | None:intergenic | 30.0% |
| !!! | ATGGCCATTTTTTAAGGTTT+TGG | - | chr4_3:40217066-40217085 | None:intergenic | 30.0% |
| AAAACCTTAAAAAATGGCCA+TGG | + | chr4_3:40217065-40217084 | Msa0640840:exon | 30.0% | |
| ATCTTCATCTTCTTCTTCAA+CGG | + | chr4_3:40217173-40217192 | Msa0640840:CDS | 30.0% | |
| ! | TGAAGAGATTTAAGATTTCG+TGG | - | chr4_3:40217396-40217415 | None:intergenic | 30.0% |
| ! | GTGTTATTCATGGAATTGAA+AGG | + | chr4_3:40217604-40217623 | Msa0640840:CDS | 30.0% |
| !!! | TCTTCCTATTTTTGATGCAT+TGG | + | chr4_3:40217782-40217801 | Msa0640840:CDS | 30.0% |
| AAAAGAAGAGGTTGTTGATA+AGG | + | chr4_3:40218548-40218567 | Msa0640840:CDS | 30.0% | |
| ! | ATGGGTAAATTAAGAAGTGT+CGG | - | chr4_3:40216819-40216838 | None:intergenic | 30.0% |
| ! | TGATTAAGAGGAGTTTGTTT+AGG | - | chr4_3:40216878-40216897 | None:intergenic | 30.0% |
| !!! | ATGGCCATTTTTTAAGGTTT+TGG | - | chr4_3:40217066-40217085 | None:intergenic | 30.0% |
| AAAACCTTAAAAAATGGCCA+TGG | + | chr4_3:40217065-40217084 | Msa0640840:exon | 30.0% | |
| ATCTTCATCTTCTTCTTCAA+CGG | + | chr4_3:40217173-40217192 | Msa0640840:CDS | 30.0% | |
| ! | TGAAGAGATTTAAGATTTCG+TGG | - | chr4_3:40217396-40217415 | None:intergenic | 30.0% |
| ! | GTGTTATTCATGGAATTGAA+AGG | + | chr4_3:40217604-40217623 | Msa0640840:CDS | 30.0% |
| !!! | TCTTCCTATTTTTGATGCAT+TGG | + | chr4_3:40217782-40217801 | Msa0640840:CDS | 30.0% |
| AAAAGAAGAGGTTGTTGATA+AGG | + | chr4_3:40218548-40218567 | Msa0640840:CDS | 30.0% | |
| ! | TTAAGAGGAGTTTGTTTAGG+TGG | - | chr4_3:40216875-40216894 | None:intergenic | 35.0% |
| ACATAAACACAGGTAGCATT+TGG | + | chr4_3:40217011-40217030 | Msa0640840:five_prime_UTR | 35.0% | |
| !!! | CAATCCATGGCCATTTTTTA+AGG | - | chr4_3:40217072-40217091 | None:intergenic | 35.0% |
| ! | TAAAAAATGGCCATGGATTG+CGG | + | chr4_3:40217072-40217091 | Msa0640840:exon | 35.0% |
| ATTATCCCAACACGAATCAA+TGG | + | chr4_3:40217435-40217454 | Msa0640840:CDS | 35.0% | |
| AATGGATCTGTATCCAACAA+AGG | + | chr4_3:40217453-40217472 | Msa0640840:CDS | 35.0% | |
| TGAGCATCAGTTATTGATAC+AGG | + | chr4_3:40217506-40217525 | Msa0640840:CDS | 35.0% | |
| CAAATGAAACATCGCAACAA+TGG | + | chr4_3:40217529-40217548 | Msa0640840:CDS | 35.0% | |
| AATGATGTTACAAGACCTGA+TGG | + | chr4_3:40217582-40217601 | Msa0640840:CDS | 35.0% | |
| ATTCCATGAATAACACCATC+AGG | - | chr4_3:40217600-40217619 | None:intergenic | 35.0% | |
| TTGAAAGGCTTCTTATTCCA+AGG | + | chr4_3:40217619-40217638 | Msa0640840:CDS | 35.0% | |
| GTTAATAAGCTTCCATTACC+TGG | - | chr4_3:40217840-40217859 | None:intergenic | 35.0% | |
| ! | TAATCAGATGTATTGGTGTC+TGG | - | chr4_3:40217935-40217954 | None:intergenic | 35.0% |
| CAAACACTGATACATTATGG+AGG | + | chr4_3:40218117-40218136 | Msa0640840:CDS | 35.0% | |
| TTATGGAGGTTATAACGAGA+TGG | + | chr4_3:40218131-40218150 | Msa0640840:CDS | 35.0% | |
| ATGAGTAGGTTAGTATCAGA+GGG | + | chr4_3:40218192-40218211 | Msa0640840:CDS | 35.0% | |
| TTAGCCATAGCTTCATCATT+TGG | - | chr4_3:40218240-40218259 | None:intergenic | 35.0% | |
| AGCTATGGCTAAGTTAACAA+CGG | + | chr4_3:40218248-40218267 | Msa0640840:CDS | 35.0% | |
| GTTTGACCCGGATATTTATA+CGG | + | chr4_3:40218473-40218492 | Msa0640840:CDS | 35.0% | |
| TCCACATGAAGAAAAAGAAG+AGG | + | chr4_3:40218536-40218555 | Msa0640840:CDS | 35.0% | |
| ! | ACCTCTTCTTTTTCTTCATG+TGG | - | chr4_3:40218540-40218559 | None:intergenic | 35.0% |
| ! | TTAAGAGGAGTTTGTTTAGG+TGG | - | chr4_3:40216875-40216894 | None:intergenic | 35.0% |
| ACATAAACACAGGTAGCATT+TGG | + | chr4_3:40217011-40217030 | Msa0640840:five_prime_UTR | 35.0% | |
| !!! | CAATCCATGGCCATTTTTTA+AGG | - | chr4_3:40217072-40217091 | None:intergenic | 35.0% |
| ! | TAAAAAATGGCCATGGATTG+CGG | + | chr4_3:40217072-40217091 | Msa0640840:exon | 35.0% |
| ATTATCCCAACACGAATCAA+TGG | + | chr4_3:40217435-40217454 | Msa0640840:CDS | 35.0% | |
| AATGGATCTGTATCCAACAA+AGG | + | chr4_3:40217453-40217472 | Msa0640840:CDS | 35.0% | |
| TGAGCATCAGTTATTGATAC+AGG | + | chr4_3:40217506-40217525 | Msa0640840:CDS | 35.0% | |
| CAAATGAAACATCGCAACAA+TGG | + | chr4_3:40217529-40217548 | Msa0640840:CDS | 35.0% | |
| AATGATGTTACAAGACCTGA+TGG | + | chr4_3:40217582-40217601 | Msa0640840:CDS | 35.0% | |
| ATTCCATGAATAACACCATC+AGG | - | chr4_3:40217600-40217619 | None:intergenic | 35.0% | |
| TTGAAAGGCTTCTTATTCCA+AGG | + | chr4_3:40217619-40217638 | Msa0640840:CDS | 35.0% | |
| GTTAATAAGCTTCCATTACC+TGG | - | chr4_3:40217840-40217859 | None:intergenic | 35.0% | |
| ! | TAATCAGATGTATTGGTGTC+TGG | - | chr4_3:40217935-40217954 | None:intergenic | 35.0% |
| CAAACACTGATACATTATGG+AGG | + | chr4_3:40218117-40218136 | Msa0640840:CDS | 35.0% | |
| TTATGGAGGTTATAACGAGA+TGG | + | chr4_3:40218131-40218150 | Msa0640840:CDS | 35.0% | |
| ATGAGTAGGTTAGTATCAGA+GGG | + | chr4_3:40218192-40218211 | Msa0640840:CDS | 35.0% | |
| TTAGCCATAGCTTCATCATT+TGG | - | chr4_3:40218240-40218259 | None:intergenic | 35.0% | |
| AGCTATGGCTAAGTTAACAA+CGG | + | chr4_3:40218248-40218267 | Msa0640840:CDS | 35.0% | |
| GTTTGACCCGGATATTTATA+CGG | + | chr4_3:40218473-40218492 | Msa0640840:CDS | 35.0% | |
| TCCACATGAAGAAAAAGAAG+AGG | + | chr4_3:40218536-40218555 | Msa0640840:CDS | 35.0% | |
| ! | ACCTCTTCTTTTTCTTCATG+TGG | - | chr4_3:40218540-40218559 | None:intergenic | 35.0% |
| TTGAACTAGGAGTTGAGTGT+GGG | - | chr4_3:40216729-40216748 | None:intergenic | 40.0% | |
| ATTGAACTAGGAGTTGAGTG+TGG | - | chr4_3:40216730-40216749 | None:intergenic | 40.0% | |
| GGTTGCATTGTGAAAGTCTA+AGG | - | chr4_3:40216798-40216817 | None:intergenic | 40.0% | |
| ! | GTTTGTTTAGGTGGTAATGC+TGG | - | chr4_3:40216866-40216885 | None:intergenic | 40.0% |
| AAGTGAAGAAGAAGAACGTG+CGG | - | chr4_3:40217125-40217144 | None:intergenic | 40.0% | |
| TTTACCGACAGTGTCTTCTA+GGG | - | chr4_3:40217292-40217311 | None:intergenic | 40.0% | |
| ! | TTTTACCGACAGTGTCTTCT+AGG | - | chr4_3:40217293-40217312 | None:intergenic | 40.0% |
| !!! | CGTTCTAGAGCTTGGTTTTT+TGG | - | chr4_3:40217336-40217355 | None:intergenic | 40.0% |
| !! | TAAGATTTCGTGGCTCTAAG+AGG | - | chr4_3:40217386-40217405 | None:intergenic | 40.0% |
| !! | CAGATCCATTGATTCGTGTT+GGG | - | chr4_3:40217443-40217462 | None:intergenic | 40.0% |
| !! | ACAGATCCATTGATTCGTGT+TGG | - | chr4_3:40217444-40217463 | None:intergenic | 40.0% |
| AAGCGACAATGTTCTATGTC+GGG | - | chr4_3:40217487-40217506 | None:intergenic | 40.0% | |
| CAAGCGACAATGTTCTATGT+CGG | - | chr4_3:40217488-40217507 | None:intergenic | 40.0% | |
| TGAAACATCGCAACAATGGT+TGG | + | chr4_3:40217533-40217552 | Msa0640840:CDS | 40.0% | |
| ! | TCGCAACAATGGTTGGTTAA+TGG | + | chr4_3:40217540-40217559 | Msa0640840:CDS | 40.0% |
| !! | AGACCTGATGGTGTTATTCA+TGG | + | chr4_3:40217594-40217613 | Msa0640840:CDS | 40.0% |
| AAGTCATCTTGAACAGACCT+TGG | - | chr4_3:40217639-40217658 | None:intergenic | 40.0% | |
| AAGATGACTTTAACCGTCGT+AGG | + | chr4_3:40217649-40217668 | Msa0640840:CDS | 40.0% | |
| TAGAAACAAGACTCCTACGA+CGG | - | chr4_3:40217665-40217684 | None:intergenic | 40.0% | |
| ATTGCTGCTATTAAACCCGA+AGG | + | chr4_3:40217684-40217703 | Msa0640840:CDS | 40.0% | |
| !! | TTTTTCAACCGATGAGTCCT+CGG | - | chr4_3:40217726-40217745 | None:intergenic | 40.0% |
| TCAAAAATAGGAAGAGCAGG+CGG | - | chr4_3:40217777-40217796 | None:intergenic | 40.0% | |
| GCATCAAAAATAGGAAGAGC+AGG | - | chr4_3:40217780-40217799 | None:intergenic | 40.0% | |
| GGAGCCAATGCATCAAAAAT+AGG | - | chr4_3:40217789-40217808 | None:intergenic | 40.0% | |
| !!! | ATTTTTGATGCATTGGCTCC+TGG | + | chr4_3:40217789-40217808 | Msa0640840:CDS | 40.0% |
| CATGTCAATTGTGTAGTGTC+TGG | + | chr4_3:40217994-40218013 | Msa0640840:intron | 40.0% | |
| ATTGTGTAGTGTCTGGTGTT+CGG | + | chr4_3:40218001-40218020 | Msa0640840:intron | 40.0% | |
| !!! | CTAACTTGTTTTTCAGGACC+TGG | + | chr4_3:40218045-40218064 | Msa0640840:intron | 40.0% |
| GATGAGTAGGTTAGTATCAG+AGG | + | chr4_3:40218191-40218210 | Msa0640840:CDS | 40.0% | |
| AGCACCAAATGATGAAGCTA+TGG | + | chr4_3:40218233-40218252 | Msa0640840:CDS | 40.0% | |
| !! | ATAATTTGTTCCGGTGAACC+CGG | - | chr4_3:40218288-40218307 | None:intergenic | 40.0% |
| CTCTCTTCAGTTTGATACTC+AGG | - | chr4_3:40218327-40218346 | None:intergenic | 40.0% | |
| TGCTGTTAGAAGATTTGGGA+AGG | + | chr4_3:40218356-40218375 | Msa0640840:CDS | 40.0% | |
| TTAGAAGATTTGGGAAGGTG+AGG | + | chr4_3:40218361-40218380 | Msa0640840:CDS | 40.0% | |
| TACACTGAGATTGCCTCATA+AGG | + | chr4_3:40218389-40218408 | Msa0640840:CDS | 40.0% | |
| TCTTCAGCATCAACCTTATG+AGG | - | chr4_3:40218405-40218424 | None:intergenic | 40.0% | |
| TTGATGCTGAAGAAGCTGAT+GGG | + | chr4_3:40218412-40218431 | Msa0640840:CDS | 40.0% | |
| TTCGGCTTATTTGTTTGACC+CGG | + | chr4_3:40218461-40218480 | Msa0640840:CDS | 40.0% | |
| ACCCGGATATTTATACGGAT+GGG | + | chr4_3:40218478-40218497 | Msa0640840:CDS | 40.0% | |
| TCCCATCCGTATAAATATCC+GGG | - | chr4_3:40218482-40218501 | None:intergenic | 40.0% | |
| CTCCCATCCGTATAAATATC+CGG | - | chr4_3:40218483-40218502 | None:intergenic | 40.0% | |
| ATTTCTGTGCAAGGGATTGA+TGG | + | chr4_3:40218504-40218523 | Msa0640840:CDS | 40.0% | |
| TTTCTGTGCAAGGGATTGAT+GGG | + | chr4_3:40218505-40218524 | Msa0640840:CDS | 40.0% | |
| TTGAACTAGGAGTTGAGTGT+GGG | - | chr4_3:40216729-40216748 | None:intergenic | 40.0% | |
| ATTGAACTAGGAGTTGAGTG+TGG | - | chr4_3:40216730-40216749 | None:intergenic | 40.0% | |
| GGTTGCATTGTGAAAGTCTA+AGG | - | chr4_3:40216798-40216817 | None:intergenic | 40.0% | |
| ! | GTTTGTTTAGGTGGTAATGC+TGG | - | chr4_3:40216866-40216885 | None:intergenic | 40.0% |
| AAGTGAAGAAGAAGAACGTG+CGG | - | chr4_3:40217125-40217144 | None:intergenic | 40.0% | |
| TTTACCGACAGTGTCTTCTA+GGG | - | chr4_3:40217292-40217311 | None:intergenic | 40.0% | |
| ! | TTTTACCGACAGTGTCTTCT+AGG | - | chr4_3:40217293-40217312 | None:intergenic | 40.0% |
| !!! | CGTTCTAGAGCTTGGTTTTT+TGG | - | chr4_3:40217336-40217355 | None:intergenic | 40.0% |
| !! | TAAGATTTCGTGGCTCTAAG+AGG | - | chr4_3:40217386-40217405 | None:intergenic | 40.0% |
| !! | CAGATCCATTGATTCGTGTT+GGG | - | chr4_3:40217443-40217462 | None:intergenic | 40.0% |
| !! | ACAGATCCATTGATTCGTGT+TGG | - | chr4_3:40217444-40217463 | None:intergenic | 40.0% |
| AAGCGACAATGTTCTATGTC+GGG | - | chr4_3:40217487-40217506 | None:intergenic | 40.0% | |
| CAAGCGACAATGTTCTATGT+CGG | - | chr4_3:40217488-40217507 | None:intergenic | 40.0% | |
| TGAAACATCGCAACAATGGT+TGG | + | chr4_3:40217533-40217552 | Msa0640840:CDS | 40.0% | |
| ! | TCGCAACAATGGTTGGTTAA+TGG | + | chr4_3:40217540-40217559 | Msa0640840:CDS | 40.0% |
| !! | AGACCTGATGGTGTTATTCA+TGG | + | chr4_3:40217594-40217613 | Msa0640840:CDS | 40.0% |
| AAGTCATCTTGAACAGACCT+TGG | - | chr4_3:40217639-40217658 | None:intergenic | 40.0% | |
| AAGATGACTTTAACCGTCGT+AGG | + | chr4_3:40217649-40217668 | Msa0640840:CDS | 40.0% | |
| TAGAAACAAGACTCCTACGA+CGG | - | chr4_3:40217665-40217684 | None:intergenic | 40.0% | |
| ATTGCTGCTATTAAACCCGA+AGG | + | chr4_3:40217684-40217703 | Msa0640840:CDS | 40.0% | |
| !! | TTTTTCAACCGATGAGTCCT+CGG | - | chr4_3:40217726-40217745 | None:intergenic | 40.0% |
| TCAAAAATAGGAAGAGCAGG+CGG | - | chr4_3:40217777-40217796 | None:intergenic | 40.0% | |
| GCATCAAAAATAGGAAGAGC+AGG | - | chr4_3:40217780-40217799 | None:intergenic | 40.0% | |
| GGAGCCAATGCATCAAAAAT+AGG | - | chr4_3:40217789-40217808 | None:intergenic | 40.0% | |
| !!! | ATTTTTGATGCATTGGCTCC+TGG | + | chr4_3:40217789-40217808 | Msa0640840:CDS | 40.0% |
| CATGTCAATTGTGTAGTGTC+TGG | + | chr4_3:40217994-40218013 | Msa0640840:intron | 40.0% | |
| ATTGTGTAGTGTCTGGTGTT+CGG | + | chr4_3:40218001-40218020 | Msa0640840:intron | 40.0% | |
| !!! | CTAACTTGTTTTTCAGGACC+TGG | + | chr4_3:40218045-40218064 | Msa0640840:intron | 40.0% |
| GATGAGTAGGTTAGTATCAG+AGG | + | chr4_3:40218191-40218210 | Msa0640840:CDS | 40.0% | |
| AGCACCAAATGATGAAGCTA+TGG | + | chr4_3:40218233-40218252 | Msa0640840:CDS | 40.0% | |
| !! | ATAATTTGTTCCGGTGAACC+CGG | - | chr4_3:40218288-40218307 | None:intergenic | 40.0% |
| CTCTCTTCAGTTTGATACTC+AGG | - | chr4_3:40218327-40218346 | None:intergenic | 40.0% | |
| TGCTGTTAGAAGATTTGGGA+AGG | + | chr4_3:40218356-40218375 | Msa0640840:CDS | 40.0% | |
| TTAGAAGATTTGGGAAGGTG+AGG | + | chr4_3:40218361-40218380 | Msa0640840:CDS | 40.0% | |
| TACACTGAGATTGCCTCATA+AGG | + | chr4_3:40218389-40218408 | Msa0640840:CDS | 40.0% | |
| TCTTCAGCATCAACCTTATG+AGG | - | chr4_3:40218405-40218424 | None:intergenic | 40.0% | |
| TTGATGCTGAAGAAGCTGAT+GGG | + | chr4_3:40218412-40218431 | Msa0640840:CDS | 40.0% | |
| TTCGGCTTATTTGTTTGACC+CGG | + | chr4_3:40218461-40218480 | Msa0640840:CDS | 40.0% | |
| ACCCGGATATTTATACGGAT+GGG | + | chr4_3:40218478-40218497 | Msa0640840:CDS | 40.0% | |
| TCCCATCCGTATAAATATCC+GGG | - | chr4_3:40218482-40218501 | None:intergenic | 40.0% | |
| CTCCCATCCGTATAAATATC+CGG | - | chr4_3:40218483-40218502 | None:intergenic | 40.0% | |
| ATTTCTGTGCAAGGGATTGA+TGG | + | chr4_3:40218504-40218523 | Msa0640840:CDS | 40.0% | |
| TTTCTGTGCAAGGGATTGAT+GGG | + | chr4_3:40218505-40218524 | Msa0640840:CDS | 40.0% | |
| TGAACTAGGAGTTGAGTGTG+GGG | - | chr4_3:40216728-40216747 | None:intergenic | 45.0% | |
| ATGATTGAAGGGGAAGAGTG+CGG | - | chr4_3:40216761-40216780 | None:intergenic | 45.0% | |
| TGTGAAAGTCTAAGGACACG+TGG | - | chr4_3:40216790-40216809 | None:intergenic | 45.0% | |
| !! | CAAGATCTCGTTCTAGAGCT+TGG | - | chr4_3:40217344-40217363 | None:intergenic | 45.0% |
| GGATCTGTATCCAACAAAGG+CGG | + | chr4_3:40217456-40217475 | Msa0640840:CDS | 45.0% | |
| GATCTGTATCCAACAAAGGC+GGG | + | chr4_3:40217457-40217476 | Msa0640840:CDS | 45.0% | |
| ! | TATTAAACCCGAAGGTGCAC+CGG | + | chr4_3:40217692-40217711 | Msa0640840:CDS | 45.0% |
| ! | ACGTCTTCCATCAGAAGTGT+CGG | - | chr4_3:40217868-40217887 | None:intergenic | 45.0% |
| CTTCTGATGGAAGACGTGTT+TGG | + | chr4_3:40217871-40217890 | Msa0640840:intron | 45.0% | |
| ! | ATGTATTGGTGTCTGGTGTC+AGG | - | chr4_3:40217928-40217947 | None:intergenic | 45.0% |
| TTGTGTAGTGTCTGGTGTTC+GGG | + | chr4_3:40218002-40218021 | Msa0640840:intron | 45.0% | |
| !!! | ACTTGTTTTTCAGGACCTGG+TGG | + | chr4_3:40218048-40218067 | Msa0640840:intron | 45.0% |
| TGGAGGTTATAACGAGATGG+CGG | + | chr4_3:40218134-40218153 | Msa0640840:CDS | 45.0% | |
| !! | TAACGAGATGGCGGATATTC+TGG | + | chr4_3:40218143-40218162 | Msa0640840:CDS | 45.0% |
| GAACTTAACGTCGTTAGCGA+CGG | + | chr4_3:40218167-40218186 | Msa0640840:CDS | 45.0% | |
| GTTGATGCTGAAGAAGCTGA+TGG | + | chr4_3:40218411-40218430 | Msa0640840:CDS | 45.0% | |
| ! | GCTGATGGGTCGGTTAAATT+CGG | + | chr4_3:40218426-40218445 | Msa0640840:CDS | 45.0% |
| ! | CTGATGGGTCGGTTAAATTC+GGG | + | chr4_3:40218427-40218446 | Msa0640840:CDS | 45.0% |
| GTTAAATTCGGGCATGGTGA+TGG | + | chr4_3:40218438-40218457 | Msa0640840:CDS | 45.0% | |
| GACCCGGATATTTATACGGA+TGG | + | chr4_3:40218477-40218496 | Msa0640840:CDS | 45.0% | |
| CGGATATTTATACGGATGGG+AGG | + | chr4_3:40218481-40218500 | Msa0640840:CDS | 45.0% | |
| ATGGGAGGATTTCTGTGCAA+GGG | + | chr4_3:40218496-40218515 | Msa0640840:CDS | 45.0% | |
| TTCTGTGCAAGGGATTGATG+GGG | + | chr4_3:40218506-40218525 | Msa0640840:CDS | 45.0% | |
| ATAAGGCTGTGACCCAAGAA+CGG | + | chr4_3:40218565-40218584 | Msa0640840:CDS | 45.0% | |
| TGAACTAGGAGTTGAGTGTG+GGG | - | chr4_3:40216728-40216747 | None:intergenic | 45.0% | |
| ATGATTGAAGGGGAAGAGTG+CGG | - | chr4_3:40216761-40216780 | None:intergenic | 45.0% | |
| TGTGAAAGTCTAAGGACACG+TGG | - | chr4_3:40216790-40216809 | None:intergenic | 45.0% | |
| !! | CAAGATCTCGTTCTAGAGCT+TGG | - | chr4_3:40217344-40217363 | None:intergenic | 45.0% |
| GGATCTGTATCCAACAAAGG+CGG | + | chr4_3:40217456-40217475 | Msa0640840:CDS | 45.0% | |
| GATCTGTATCCAACAAAGGC+GGG | + | chr4_3:40217457-40217476 | Msa0640840:CDS | 45.0% | |
| ! | TATTAAACCCGAAGGTGCAC+CGG | + | chr4_3:40217692-40217711 | Msa0640840:CDS | 45.0% |
| ! | ACGTCTTCCATCAGAAGTGT+CGG | - | chr4_3:40217868-40217887 | None:intergenic | 45.0% |
| CTTCTGATGGAAGACGTGTT+TGG | + | chr4_3:40217871-40217890 | Msa0640840:intron | 45.0% | |
| ! | ATGTATTGGTGTCTGGTGTC+AGG | - | chr4_3:40217928-40217947 | None:intergenic | 45.0% |
| TTGTGTAGTGTCTGGTGTTC+GGG | + | chr4_3:40218002-40218021 | Msa0640840:intron | 45.0% | |
| !!! | ACTTGTTTTTCAGGACCTGG+TGG | + | chr4_3:40218048-40218067 | Msa0640840:intron | 45.0% |
| TGGAGGTTATAACGAGATGG+CGG | + | chr4_3:40218134-40218153 | Msa0640840:CDS | 45.0% | |
| !! | TAACGAGATGGCGGATATTC+TGG | + | chr4_3:40218143-40218162 | Msa0640840:CDS | 45.0% |
| GAACTTAACGTCGTTAGCGA+CGG | + | chr4_3:40218167-40218186 | Msa0640840:CDS | 45.0% | |
| GTTGATGCTGAAGAAGCTGA+TGG | + | chr4_3:40218411-40218430 | Msa0640840:CDS | 45.0% | |
| ! | GCTGATGGGTCGGTTAAATT+CGG | + | chr4_3:40218426-40218445 | Msa0640840:CDS | 45.0% |
| ! | CTGATGGGTCGGTTAAATTC+GGG | + | chr4_3:40218427-40218446 | Msa0640840:CDS | 45.0% |
| GTTAAATTCGGGCATGGTGA+TGG | + | chr4_3:40218438-40218457 | Msa0640840:CDS | 45.0% | |
| GACCCGGATATTTATACGGA+TGG | + | chr4_3:40218477-40218496 | Msa0640840:CDS | 45.0% | |
| CGGATATTTATACGGATGGG+AGG | + | chr4_3:40218481-40218500 | Msa0640840:CDS | 45.0% | |
| ATGGGAGGATTTCTGTGCAA+GGG | + | chr4_3:40218496-40218515 | Msa0640840:CDS | 45.0% | |
| TTCTGTGCAAGGGATTGATG+GGG | + | chr4_3:40218506-40218525 | Msa0640840:CDS | 45.0% | |
| ATAAGGCTGTGACCCAAGAA+CGG | + | chr4_3:40218565-40218584 | Msa0640840:CDS | 45.0% | |
| AAGGGCCAGGTAGTAGAAGT+TGG | + | chr4_3:40216690-40216709 | Msa0640840:five_prime_UTR | 50.0% | |
| AGGGCCAGGTAGTAGAAGTT+GGG | + | chr4_3:40216691-40216710 | Msa0640840:five_prime_UTR | 50.0% | |
| CTCTCCCAACTTCTACTACC+TGG | - | chr4_3:40216698-40216717 | None:intergenic | 50.0% | |
| GCGGTGTGTGACATTGAACT+AGG | - | chr4_3:40216742-40216761 | None:intergenic | 50.0% | |
| AAAGTCTAAGGACACGTGGC+GGG | - | chr4_3:40216786-40216805 | None:intergenic | 50.0% | |
| GAAAGTCTAAGGACACGTGG+CGG | - | chr4_3:40216787-40216806 | None:intergenic | 50.0% | |
| ACCATAGATGCCGCAATCCA+TGG | - | chr4_3:40217085-40217104 | None:intergenic | 50.0% | |
| CAGACCCTAGAAGACACTGT+CGG | + | chr4_3:40217285-40217304 | Msa0640840:CDS | 50.0% | |
| ! | AGGTTGATCCGAGGACTCAT+CGG | + | chr4_3:40217715-40217734 | Msa0640840:CDS | 50.0% |
| AAGCTTCCATTACCTGGTGC+TGG | - | chr4_3:40217834-40217853 | None:intergenic | 50.0% | |
| ACACTGACCGACACTTCTGA+TGG | + | chr4_3:40217858-40217877 | Msa0640840:intron | 50.0% | |
| !! | TGGAAGACGTGTTTGGTGTC+TGG | + | chr4_3:40217878-40217897 | Msa0640840:intron | 50.0% |
| !! | ACGTGTTTGGTGTCTGGTGT+CGG | + | chr4_3:40217884-40217903 | Msa0640840:intron | 50.0% |
| GGACCCCACCATCATTTCAA+CGG | + | chr4_3:40218069-40218088 | Msa0640840:CDS | 50.0% | |
| GACCCCACCATCATTTCAAC+GGG | + | chr4_3:40218070-40218089 | Msa0640840:CDS | 50.0% | |
| ACCCCACCATCATTTCAACG+GGG | + | chr4_3:40218071-40218090 | Msa0640840:CDS | 50.0% | |
| ! | TCCCCGTTGAAATGATGGTG+GGG | - | chr4_3:40218075-40218094 | None:intergenic | 50.0% |
| CTCCCCGTTGAAATGATGGT+GGG | - | chr4_3:40218076-40218095 | None:intergenic | 50.0% | |
| AACGGACCAGTTGAGTGAAC+CGG | + | chr4_3:40218266-40218285 | Msa0640840:CDS | 50.0% | |
| ! | TGCTGAAGAAGCTGATGGGT+CGG | + | chr4_3:40218416-40218435 | Msa0640840:CDS | 50.0% |
| !! | ATTCGGGCATGGTGATGGTT+CGG | + | chr4_3:40218443-40218462 | Msa0640840:CDS | 50.0% |
| GATGGGAGGATTTCTGTGCA+AGG | + | chr4_3:40218495-40218514 | Msa0640840:CDS | 50.0% | |
| GGGTTTACCCTTCCGTTCTT+GGG | - | chr4_3:40218580-40218599 | None:intergenic | 50.0% | |
| TTGCTTGGCCACAACCTTAG+CGG | - | chr4_3:40218601-40218620 | None:intergenic | 50.0% | |
| GTTGTGGCCAAGCAAAGAAG+AGG | + | chr4_3:40218606-40218625 | Msa0640840:CDS | 50.0% | |
| CAACGCACCTCTTCTTTGCT+TGG | - | chr4_3:40218616-40218635 | None:intergenic | 50.0% | |
| AAGGGCCAGGTAGTAGAAGT+TGG | + | chr4_3:40216690-40216709 | Msa0640840:five_prime_UTR | 50.0% | |
| AGGGCCAGGTAGTAGAAGTT+GGG | + | chr4_3:40216691-40216710 | Msa0640840:five_prime_UTR | 50.0% | |
| CTCTCCCAACTTCTACTACC+TGG | - | chr4_3:40216698-40216717 | None:intergenic | 50.0% | |
| GCGGTGTGTGACATTGAACT+AGG | - | chr4_3:40216742-40216761 | None:intergenic | 50.0% | |
| AAAGTCTAAGGACACGTGGC+GGG | - | chr4_3:40216786-40216805 | None:intergenic | 50.0% | |
| GAAAGTCTAAGGACACGTGG+CGG | - | chr4_3:40216787-40216806 | None:intergenic | 50.0% | |
| ACCATAGATGCCGCAATCCA+TGG | - | chr4_3:40217085-40217104 | None:intergenic | 50.0% | |
| CAGACCCTAGAAGACACTGT+CGG | + | chr4_3:40217285-40217304 | Msa0640840:CDS | 50.0% | |
| ! | AGGTTGATCCGAGGACTCAT+CGG | + | chr4_3:40217715-40217734 | Msa0640840:CDS | 50.0% |
| AAGCTTCCATTACCTGGTGC+TGG | - | chr4_3:40217834-40217853 | None:intergenic | 50.0% | |
| ACACTGACCGACACTTCTGA+TGG | + | chr4_3:40217858-40217877 | Msa0640840:intron | 50.0% | |
| !! | TGGAAGACGTGTTTGGTGTC+TGG | + | chr4_3:40217878-40217897 | Msa0640840:intron | 50.0% |
| !! | ACGTGTTTGGTGTCTGGTGT+CGG | + | chr4_3:40217884-40217903 | Msa0640840:intron | 50.0% |
| GGACCCCACCATCATTTCAA+CGG | + | chr4_3:40218069-40218088 | Msa0640840:CDS | 50.0% | |
| GACCCCACCATCATTTCAAC+GGG | + | chr4_3:40218070-40218089 | Msa0640840:CDS | 50.0% | |
| ACCCCACCATCATTTCAACG+GGG | + | chr4_3:40218071-40218090 | Msa0640840:CDS | 50.0% | |
| ! | TCCCCGTTGAAATGATGGTG+GGG | - | chr4_3:40218075-40218094 | None:intergenic | 50.0% |
| CTCCCCGTTGAAATGATGGT+GGG | - | chr4_3:40218076-40218095 | None:intergenic | 50.0% | |
| AACGGACCAGTTGAGTGAAC+CGG | + | chr4_3:40218266-40218285 | Msa0640840:CDS | 50.0% | |
| ! | TGCTGAAGAAGCTGATGGGT+CGG | + | chr4_3:40218416-40218435 | Msa0640840:CDS | 50.0% |
| !! | ATTCGGGCATGGTGATGGTT+CGG | + | chr4_3:40218443-40218462 | Msa0640840:CDS | 50.0% |
| GATGGGAGGATTTCTGTGCA+AGG | + | chr4_3:40218495-40218514 | Msa0640840:CDS | 50.0% | |
| GGGTTTACCCTTCCGTTCTT+GGG | - | chr4_3:40218580-40218599 | None:intergenic | 50.0% | |
| TTGCTTGGCCACAACCTTAG+CGG | - | chr4_3:40218601-40218620 | None:intergenic | 50.0% | |
| GTTGTGGCCAAGCAAAGAAG+AGG | + | chr4_3:40218606-40218625 | Msa0640840:CDS | 50.0% | |
| CAACGCACCTCTTCTTTGCT+TGG | - | chr4_3:40218616-40218635 | None:intergenic | 50.0% | |
| ! | GTGGCGGGGTATGATTGAAG+GGG | - | chr4_3:40216771-40216790 | None:intergenic | 55.0% |
| ! | CGTGGCGGGGTATGATTGAA+GGG | - | chr4_3:40216772-40216791 | None:intergenic | 55.0% |
| ! | ACGTGGCGGGGTATGATTGA+AGG | - | chr4_3:40216773-40216792 | None:intergenic | 55.0% |
| AAGTCTAAGGACACGTGGCG+GGG | - | chr4_3:40216785-40216804 | None:intergenic | 55.0% | |
| ! | GCCATGGATTGCGGCATCTA+TGG | + | chr4_3:40217081-40217100 | Msa0640840:CDS | 55.0% |
| ATCAACCTCCGGTGCACCTT+CGG | - | chr4_3:40217703-40217722 | None:intergenic | 55.0% | |
| TGAGTCCTCGGATCAACCTC+CGG | - | chr4_3:40217714-40217733 | None:intergenic | 55.0% | |
| ! | ATTGGCTCCTGGACCTTCTC+TGG | + | chr4_3:40217800-40217819 | Msa0640840:CDS | 55.0% |
| !! | AAATGATGGTGGGGTCCACC+AGG | - | chr4_3:40218066-40218085 | None:intergenic | 55.0% |
| CCTCCCCGTTGAAATGATGG+TGG | - | chr4_3:40218077-40218096 | None:intergenic | 55.0% | |
| CCACCATCATTTCAACGGGG+AGG | + | chr4_3:40218074-40218093 | Msa0640840:CDS | 55.0% | |
| GTGCCTCCCCGTTGAAATGA+TGG | - | chr4_3:40218080-40218099 | None:intergenic | 55.0% | |
| ! | TCATTTCAACGGGGAGGCAC+AGG | + | chr4_3:40218080-40218099 | Msa0640840:CDS | 55.0% |
| CGTTAGCGACGGAGATGAGT+AGG | + | chr4_3:40218178-40218197 | Msa0640840:CDS | 55.0% | |
| ACGGACCAGTTGAGTGAACC+GGG | + | chr4_3:40218267-40218286 | Msa0640840:CDS | 55.0% | |
| GTGAACCCGGTTCACTCAAC+TGG | - | chr4_3:40218275-40218294 | None:intergenic | 55.0% | |
| GTTGAGTGAACCGGGTTCAC+CGG | + | chr4_3:40218275-40218294 | Msa0640840:CDS | 55.0% | |
| GGGTCGGTTAAATTCGGGCA+TGG | + | chr4_3:40218432-40218451 | Msa0640840:CDS | 55.0% | |
| GCTGTGACCCAAGAACGGAA+GGG | + | chr4_3:40218570-40218589 | Msa0640840:CDS | 55.0% | |
| CGGGTTTACCCTTCCGTTCT+TGG | - | chr4_3:40218581-40218600 | None:intergenic | 55.0% | |
| ACGGAAGGGTAAACCCGCTA+AGG | + | chr4_3:40218584-40218603 | Msa0640840:CDS | 55.0% | |
| GGGTAAACCCGCTAAGGTTG+TGG | + | chr4_3:40218590-40218609 | Msa0640840:CDS | 55.0% | |
| TGCTTGGCCACAACCTTAGC+GGG | - | chr4_3:40218600-40218619 | None:intergenic | 55.0% | |
| ! | GTGGCGGGGTATGATTGAAG+GGG | - | chr4_3:40216771-40216790 | None:intergenic | 55.0% |
| ! | CGTGGCGGGGTATGATTGAA+GGG | - | chr4_3:40216772-40216791 | None:intergenic | 55.0% |
| ! | ACGTGGCGGGGTATGATTGA+AGG | - | chr4_3:40216773-40216792 | None:intergenic | 55.0% |
| AAGTCTAAGGACACGTGGCG+GGG | - | chr4_3:40216785-40216804 | None:intergenic | 55.0% | |
| ! | GCCATGGATTGCGGCATCTA+TGG | + | chr4_3:40217081-40217100 | Msa0640840:CDS | 55.0% |
| ATCAACCTCCGGTGCACCTT+CGG | - | chr4_3:40217703-40217722 | None:intergenic | 55.0% | |
| TGAGTCCTCGGATCAACCTC+CGG | - | chr4_3:40217714-40217733 | None:intergenic | 55.0% | |
| ! | ATTGGCTCCTGGACCTTCTC+TGG | + | chr4_3:40217800-40217819 | Msa0640840:CDS | 55.0% |
| !! | AAATGATGGTGGGGTCCACC+AGG | - | chr4_3:40218066-40218085 | None:intergenic | 55.0% |
| CCTCCCCGTTGAAATGATGG+TGG | - | chr4_3:40218077-40218096 | None:intergenic | 55.0% | |
| CCACCATCATTTCAACGGGG+AGG | + | chr4_3:40218074-40218093 | Msa0640840:CDS | 55.0% | |
| GTGCCTCCCCGTTGAAATGA+TGG | - | chr4_3:40218080-40218099 | None:intergenic | 55.0% | |
| ! | TCATTTCAACGGGGAGGCAC+AGG | + | chr4_3:40218080-40218099 | Msa0640840:CDS | 55.0% |
| CGTTAGCGACGGAGATGAGT+AGG | + | chr4_3:40218178-40218197 | Msa0640840:CDS | 55.0% | |
| ACGGACCAGTTGAGTGAACC+GGG | + | chr4_3:40218267-40218286 | Msa0640840:CDS | 55.0% | |
| GTGAACCCGGTTCACTCAAC+TGG | - | chr4_3:40218275-40218294 | None:intergenic | 55.0% | |
| GTTGAGTGAACCGGGTTCAC+CGG | + | chr4_3:40218275-40218294 | Msa0640840:CDS | 55.0% | |
| GGGTCGGTTAAATTCGGGCA+TGG | + | chr4_3:40218432-40218451 | Msa0640840:CDS | 55.0% | |
| GCTGTGACCCAAGAACGGAA+GGG | + | chr4_3:40218570-40218589 | Msa0640840:CDS | 55.0% | |
| CGGGTTTACCCTTCCGTTCT+TGG | - | chr4_3:40218581-40218600 | None:intergenic | 55.0% | |
| ACGGAAGGGTAAACCCGCTA+AGG | + | chr4_3:40218584-40218603 | Msa0640840:CDS | 55.0% | |
| GGGTAAACCCGCTAAGGTTG+TGG | + | chr4_3:40218590-40218609 | Msa0640840:CDS | 55.0% | |
| TGCTTGGCCACAACCTTAGC+GGG | - | chr4_3:40218600-40218619 | None:intergenic | 55.0% | |
| ! | TAAACCCGAAGGTGCACCGG+AGG | + | chr4_3:40217695-40217714 | Msa0640840:CDS | 60.0% |
| TCAACCTCCGGTGCACCTTC+GGG | - | chr4_3:40217702-40217721 | None:intergenic | 60.0% | |
| TCCTGGACCTTCTCTGGCAC+CGG | + | chr4_3:40217806-40217825 | Msa0640840:CDS | 60.0% | |
| GGCTGTGACCCAAGAACGGA+AGG | + | chr4_3:40218569-40218588 | Msa0640840:CDS | 60.0% | |
| ! | TAAACCCGAAGGTGCACCGG+AGG | + | chr4_3:40217695-40217714 | Msa0640840:CDS | 60.0% |
| TCAACCTCCGGTGCACCTTC+GGG | - | chr4_3:40217702-40217721 | None:intergenic | 60.0% | |
| TCCTGGACCTTCTCTGGCAC+CGG | + | chr4_3:40217806-40217825 | Msa0640840:CDS | 60.0% | |
| GGCTGTGACCCAAGAACGGA+AGG | + | chr4_3:40218569-40218588 | Msa0640840:CDS | 60.0% | |
| TCGGGTCGACCCGCCTTTGT+TGG | - | chr4_3:40217469-40217488 | None:intergenic | 65.0% | |
| ! | GTGCACCGGAGGTTGATCCG+AGG | + | chr4_3:40217706-40217725 | Msa0640840:CDS | 65.0% |
| !! | CCATTACCTGGTGCTGGCGC+CGG | - | chr4_3:40217828-40217847 | None:intergenic | 65.0% |
| ! | CAACGGGGAGGCACAGGTGA+AGG | + | chr4_3:40218086-40218105 | Msa0640840:CDS | 65.0% |
| TCGGGTCGACCCGCCTTTGT+TGG | - | chr4_3:40217469-40217488 | None:intergenic | 65.0% | |
| ! | GTGCACCGGAGGTTGATCCG+AGG | + | chr4_3:40217706-40217725 | Msa0640840:CDS | 65.0% |
| !! | CCATTACCTGGTGCTGGCGC+CGG | - | chr4_3:40217828-40217847 | None:intergenic | 65.0% |
| ! | CAACGGGGAGGCACAGGTGA+AGG | + | chr4_3:40218086-40218105 | Msa0640840:CDS | 65.0% |
| ! | CCAGGCTTCTGCGGTGGTGG+CGG | - | chr4_3:40217750-40217769 | None:intergenic | 70.0% |
| GAGCCAGGCTTCTGCGGTGG+TGG | - | chr4_3:40217753-40217772 | None:intergenic | 70.0% | |
| GGAGAGCCAGGCTTCTGCGG+TGG | - | chr4_3:40217756-40217775 | None:intergenic | 70.0% | |
| GGCGGAGAGCCAGGCTTCTG+CGG | - | chr4_3:40217759-40217778 | None:intergenic | 70.0% | |
| GGAAGAGCAGGCGGAGAGCC+AGG | - | chr4_3:40217768-40217787 | None:intergenic | 70.0% | |
| ! | GCCGGTGCCAGAGAAGGTCC+AGG | - | chr4_3:40217810-40217829 | None:intergenic | 70.0% |
| CCGGCGCCAGCACCAGGTAA+TGG | + | chr4_3:40217825-40217844 | Msa0640840:intron | 70.0% | |
| ! | CCAGGCTTCTGCGGTGGTGG+CGG | - | chr4_3:40217750-40217769 | None:intergenic | 70.0% |
| GAGCCAGGCTTCTGCGGTGG+TGG | - | chr4_3:40217753-40217772 | None:intergenic | 70.0% | |
| GGAGAGCCAGGCTTCTGCGG+TGG | - | chr4_3:40217756-40217775 | None:intergenic | 70.0% | |
| GGCGGAGAGCCAGGCTTCTG+CGG | - | chr4_3:40217759-40217778 | None:intergenic | 70.0% | |
| GGAAGAGCAGGCGGAGAGCC+AGG | - | chr4_3:40217768-40217787 | None:intergenic | 70.0% | |
| ! | GCCGGTGCCAGAGAAGGTCC+AGG | - | chr4_3:40217810-40217829 | None:intergenic | 70.0% |
| CCGGCGCCAGCACCAGGTAA+TGG | + | chr4_3:40217825-40217844 | Msa0640840:intron | 70.0% | |
| CCGCCACCACCGCAGAAGCC+TGG | + | chr4_3:40217747-40217766 | Msa0640840:CDS | 75.0% | |
| !! | GCTGGCGCCGGTGCCAGAGA+AGG | - | chr4_3:40217816-40217835 | None:intergenic | 75.0% |
| CCGCCACCACCGCAGAAGCC+TGG | + | chr4_3:40217747-40217766 | Msa0640840:CDS | 75.0% | |
| !! | GCTGGCGCCGGTGCCAGAGA+AGG | - | chr4_3:40217816-40217835 | None:intergenic | 75.0% |
| !!! | CTGGCACCGGCGCCAGCACC+AGG | + | chr4_3:40217819-40217838 | Msa0640840:CDS | 80.0% |
| !!! | CTGGCACCGGCGCCAGCACC+AGG | + | chr4_3:40217819-40217838 | Msa0640840:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 40216689 | 40218641 | 40216689 | ID=Msa0640840;Name=Msa0640840 |
| chr4_3 | mRNA | 40216689 | 40218641 | 40216689 | ID=Msa0640840-mRNA-1;Parent=Msa0640840;Name=Msa0640840-mRNA-1;_AED=0.18;_eAED=0.18;_QI=389|1|0.5|1|1|1|2|0|447 |
| chr4_3 | exon | 40216689 | 40217840 | 40216689 | ID=Msa0640840-mRNA-1:exon:9042;Parent=Msa0640840-mRNA-1 |
| chr4_3 | exon | 40218061 | 40218641 | 40218061 | ID=Msa0640840-mRNA-1:exon:9043;Parent=Msa0640840-mRNA-1 |
| chr4_3 | five_prime_UTR | 40216689 | 40217077 | 40216689 | ID=Msa0640840-mRNA-1:five_prime_utr;Parent=Msa0640840-mRNA-1 |
| chr4_3 | CDS | 40217078 | 40217840 | 40217078 | ID=Msa0640840-mRNA-1:cds;Parent=Msa0640840-mRNA-1 |
| chr4_3 | CDS | 40218061 | 40218641 | 40218061 | ID=Msa0640840-mRNA-1:cds;Parent=Msa0640840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
