AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0176900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0176900 MtrunA17_Chr1g0199551 94.875 722 37 0 1 722 1 722 0.0 1429
Msa0176900 MtrunA17_Chr1g0181091 81.779 697 127 0 26 722 16 712 0.0 1212
Msa0176900 MtrunA17_Chr7g0264351 82.158 695 124 0 28 722 30 724 0.0 1209
Msa0176900 MtrunA17_Chr7g0264311 82.014 695 125 0 28 722 30 724 0.0 1209
Msa0176900 MtrunA17_Chr7g0264341 81.727 695 127 0 28 722 30 724 0.0 1206
Msa0176900 MtrunA17_Chr2g0326921 72.166 697 186 4 29 721 5 697 0.0 1032
Msa0176900 MtrunA17_Chr5g0448361 69.452 694 210 2 29 721 16 708 0.0 1019
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0176900 AT2G37040.1 77.686 726 157 2 1 722 1 725 0.0 1194
Msa0176900 AT3G53260.1 78.873 710 144 1 19 722 8 717 0.0 1193
Msa0176900 AT3G10340.1 77.542 708 156 3 17 722 1 707 0.0 1159
Msa0176900 AT5G04230.1 71.264 696 184 6 30 722 12 694 0.0 1019
Msa0176900 AT5G04230.2 70.857 700 184 7 30 722 12 698 0.0 1013

Find 187 sgRNAs with CRISPR-Local

Find 413 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTTGGCCTTCCAATTAAA+AGG 0.205075 1_4:+63532131 None:intergenic
CCTCAAAAGCTCCAATCTTT+TGG 0.213487 1_4:+63530925 None:intergenic
TATTGATGTTTCAAGGAATA+TGG 0.225643 1_4:-63531615 Msa0176900:CDS
AATTGAGGCTGCTGCTATTA+TGG 0.231999 1_4:-63531831 Msa0176900:CDS
CAAAGGGTCATTGTTGTTAC+TGG 0.232524 1_4:+63536825 None:intergenic
CTACATTCCTTGATCATATT+AGG 0.256307 1_4:+63530828 None:intergenic
GAAGAAATTGAGGCTGATTA+AGG 0.268813 1_4:+63536949 None:intergenic
TATATATGTTATATTGTATA+GGG 0.269837 1_4:+63537054 None:intergenic
TGCTGACAGGTGAGAAAATT+AGG 0.277184 1_4:-63530758 Msa0176900:CDS
AAATAAACATTACATGAAAA+AGG 0.283789 1_4:+63530564 None:intergenic
CTAAGGGCACAACCGGTTTC+CGG 0.296842 1_4:+63536731 None:intergenic
TCAAAATCTATTGGACCTAA+TGG 0.305142 1_4:-63532109 Msa0176900:CDS
TGGATCAGGTTTGGCTTCAT+TGG 0.306429 1_4:-63531981 Msa0176900:CDS
GCATTCAGAACTTGTCCATT+AGG 0.307197 1_4:+63532094 None:intergenic
GCTAGGGTTCAAGTTGAAAA+TGG 0.308466 1_4:-63530864 Msa0176900:CDS
CAACAATGACCCTTTGAATT+GGG 0.317046 1_4:-63536818 Msa0176900:CDS
ACTAGTGCTAAACCTTCTTT+AGG 0.318031 1_4:+63532019 None:intergenic
CAACTAGCTGGAATTGAAAC+TGG 0.324510 1_4:-63532058 Msa0176900:CDS
TGCTAGCCGCAATCCAAGTT+TGG 0.335095 1_4:-63531441 Msa0176900:CDS
TCCACCATTGCAAAGATTCA+TGG 0.339048 1_4:+63536855 None:intergenic
AACCAAGATGTTAACTCTTT+AGG 0.341255 1_4:-63531314 Msa0176900:CDS
CGCAATCCAAGTTTGGATTA+CGG 0.346277 1_4:-63531434 Msa0176900:CDS
AGGCCAAATTCAAAATCTAT+TGG 0.352492 1_4:-63532118 Msa0176900:CDS
ACAACAATGACCCTTTGAAT+TGG 0.354806 1_4:-63536819 Msa0176900:CDS
ATTCCTTTAGCATATGTTGC+TGG 0.359407 1_4:-63532154 Msa0176900:CDS
TGTCTCAGCTTCTGCATTAG+AGG 0.360021 1_4:+63531011 None:intergenic
AGTTCATAAGAGAAACTTTA+GGG 0.361370 1_4:-63530788 Msa0176900:CDS
TACTGCAGTTGGATCAGGTT+TGG 0.362782 1_4:-63531990 Msa0176900:CDS
GCAGTGATTGTACCTCTTAA+TGG 0.365126 1_4:+63532190 None:intergenic
TGTATAGGGGAGGGATTTGT+GGG 0.365399 1_4:+63537068 None:intergenic
ACATTGCTTCAAGGATATTC+AGG 0.370009 1_4:-63532277 Msa0176900:CDS
AGATGGAAGTTATTATCTTA+AGG 0.370273 1_4:-63531798 Msa0176900:CDS
TCCTTCTCACAAAACCTTGA+TGG 0.371743 1_4:+63531101 None:intergenic
TGCAACAGATTTCTGAATGC+TGG 0.371910 1_4:-63532379 Msa0176900:intron
CCAATCACTACTAGCTTTAA+CGG 0.372093 1_4:+63536618 None:intergenic
TACCGGCGTGGCGGTTGAAC+TGG 0.380657 1_4:-63536659 Msa0176900:CDS
GGGAGGGATTTGTGGGATAT+AGG 0.381923 1_4:+63537075 None:intergenic
ATCCACTTATTGATGTTTCA+AGG 0.393519 1_4:-63531622 Msa0176900:CDS
GTAGCACAATCCTAGCAAAT+AGG 0.399936 1_4:+63530633 None:intergenic
TTGTATAGGGGAGGGATTTG+TGG 0.401116 1_4:+63537067 None:intergenic
TCAAGGAATATGGCACTTCA+TGG 0.407244 1_4:-63531605 Msa0176900:CDS
GTTGATCATGCATTGCAAAA+TGG 0.407281 1_4:-63530981 Msa0176900:CDS
ATCGCGTATCTATCTTGTTT+AGG 0.408011 1_4:+63531737 None:intergenic
TTTCCACCTCTTTAGGCAAA+AGG 0.408359 1_4:+63530889 None:intergenic
CATGCCTGCTCTTGTGGCTG+TGG 0.413922 1_4:+63532315 None:intergenic
AGGAATCAGATTTGAAATCA+TGG 0.416143 1_4:-63532257 Msa0176900:CDS
CGGAAACCGGTTGTGCCCTT+AGG 0.420331 1_4:-63536730 Msa0176900:CDS
TGTGCCAAGCTATTGATCTA+AGG 0.425341 1_4:-63531217 Msa0176900:CDS
ACCTGATGAGTTCACTTTGA+AGG 0.426969 1_4:+63536503 None:intergenic
GATATAGGTGAATGGCAGTT+AGG 0.429241 1_4:+63537090 None:intergenic
AATGGTACTGCAGTTGGATC+AGG 0.429438 1_4:-63531995 Msa0176900:CDS
TTCCTTGAAACATCAATAAG+TGG 0.432083 1_4:+63531620 None:intergenic
AAGTTCATAAGAGAAACTTT+AGG 0.433340 1_4:-63530789 Msa0176900:CDS
TTTCCACCTAAGGGCACAAC+CGG 0.434202 1_4:+63536724 None:intergenic
TGATCATAGGAAATGGGAAA+TGG 0.436122 1_4:+63537174 None:intergenic
CGGCTAGCAGTGAGATTTGA+AGG 0.436480 1_4:+63531455 None:intergenic
GTGGTTGATAGTATGAATAA+AGG 0.440659 1_4:-63536595 Msa0176900:CDS
GGCGGTTGAACTGGCGGAAG+AGG 0.442005 1_4:-63536650 Msa0176900:CDS
GTATTGAAGTTCTGAACAAT+AGG 0.446436 1_4:+63531382 None:intergenic
CTATATATGTTATATTGTAT+AGG 0.447469 1_4:+63537053 None:intergenic
GAAGACATGGTGTTATGTTA+TGG 0.450134 1_4:+63532212 None:intergenic
CGTTTAGCCATTGCTTCCAT+TGG 0.450648 1_4:-63531536 Msa0176900:CDS
AACCAACATGCCTGCTCTTG+TGG 0.452957 1_4:+63532309 None:intergenic
TATGGAGTGACCACTGGGTT+TGG 0.453303 1_4:-63536562 Msa0176900:CDS
TGAGGTGAAGCGTATGGTAG+AGG 0.454428 1_4:-63536758 Msa0176900:CDS
CCGTTAAAGCTAGTAGTGAT+TGG 0.454848 1_4:-63536618 Msa0176900:CDS
ACACCATGTCTTCCATTAAG+AGG 0.455708 1_4:-63532202 Msa0176900:CDS
GTTTCAACTTATGAATCAAA+TGG 0.458671 1_4:+63531867 None:intergenic
AGAGGTACAATCACTGCATC+AGG 0.458933 1_4:-63532184 Msa0176900:CDS
TGCATTGCAAAATGGTGATA+AGG 0.460091 1_4:-63530973 Msa0176900:CDS
ATTCTCACAGTTGGTGTCAA+TGG 0.460157 1_4:-63531134 Msa0176900:CDS
CCCTTCAAAGTGAACTCATC+AGG 0.460498 1_4:-63536504 Msa0176900:intron
CGAACATCACCGCAGTGGCT+TGG 0.467832 1_4:-63531713 Msa0176900:CDS
TTGAAGCCGTAATCCAAACT+TGG 0.469165 1_4:+63531428 None:intergenic
GATTTACTCAATGTTGTTGA+AGG 0.472171 1_4:-63531080 Msa0176900:CDS
TTCCACCTCTTTAGGCAAAA+GGG 0.473173 1_4:+63530890 None:intergenic
GATAGCTATGGAGTGACCAC+TGG 0.474320 1_4:-63536568 Msa0176900:CDS
TGGTTGATAGTATGAATAAA+GGG 0.479080 1_4:-63536594 Msa0176900:CDS
TTTGAGTTGCAACCTAAAGA+AGG 0.487825 1_4:-63532031 Msa0176900:CDS
GTTGTGCCCTTAGGTGGAAA+AGG 0.495345 1_4:-63536721 Msa0176900:CDS
TCCATGAATCTTTGCAATGG+TGG 0.496445 1_4:-63536856 Msa0176900:CDS
CCTGATGAGTTCACTTTGAA+GGG 0.497056 1_4:+63536504 None:intergenic
AGCCTAAAGAGTTAACATCT+TGG 0.498300 1_4:+63531312 None:intergenic
ATGCCTGCTCTTGTGGCTGT+GGG 0.500154 1_4:+63532316 None:intergenic
CTAAAGAGGTGGAAAATGCT+AGG 0.500407 1_4:-63530881 Msa0176900:CDS
TCCCATGTTGGATTGTCTAA+AGG 0.502948 1_4:-63530676 Msa0176900:CDS
CGTTAAAGCTAGTAGTGATT+GGG 0.503606 1_4:-63536617 Msa0176900:CDS
AAATTTACTAGTTGTTCTCT+CGG 0.506721 1_4:-63531945 Msa0176900:CDS
ATAATTAACAAATAAGATCA+TGG 0.506881 1_4:-63536920 Msa0176900:exon
ATCAAATGGTCAGTGAATTG+AGG 0.509685 1_4:+63531881 None:intergenic
TTCAGTTCCTAATATGATCA+AGG 0.512088 1_4:-63530835 Msa0176900:CDS
AACAATGACCCTTTGAATTG+GGG 0.517697 1_4:-63536817 Msa0176900:CDS
ACCAACTGTGAGAATTCTCT+TGG 0.519185 1_4:+63531142 None:intergenic
AGCAAACATAAGTTTACCAA+TGG 0.521443 1_4:+63531520 None:intergenic
AACAATAGCACAAGTGGCTG+CGG 0.522595 1_4:-63536695 Msa0176900:CDS
AGTTTGGATTACGGCTTCAA+AGG 0.525060 1_4:-63531425 Msa0176900:CDS
CCATACGCTTCACCTCATCT+AGG 0.525749 1_4:+63536764 None:intergenic
GGTAGAGGAATACCGGAAAC+CGG 0.526167 1_4:-63536743 Msa0176900:CDS
ACCTGGTGAGGAATGTGATA+AGG 0.527766 1_4:-63530733 Msa0176900:CDS
AAACCGGTTGTGCCCTTAGG+TGG 0.529697 1_4:-63536727 Msa0176900:CDS
CTAGTGAATGGTACTGCAGT+TGG 0.530990 1_4:-63532001 Msa0176900:CDS
TCTTGTTTAGGCTTCTGAAG+TGG 0.531050 1_4:+63531749 None:intergenic
TTAGGGACAAGTTTGCTGAC+AGG 0.531897 1_4:-63530771 Msa0176900:CDS
TCTCTTATGAACTTGTACAA+TGG 0.534620 1_4:+63530798 None:intergenic
ACAAGTTCTGAATGCTAAAG+AGG 0.536880 1_4:-63532086 Msa0176900:CDS
AGCGTATGGTAGAGGAATAC+CGG 0.537269 1_4:-63536750 Msa0176900:CDS
TTGATCATATTAGGAACTGA+AGG 0.538404 1_4:+63530837 None:intergenic
TATGGCTGCAGATTCTATGA+AGG 0.539419 1_4:-63536794 Msa0176900:CDS
CTTTGAACATGAGTGGTGAC+AGG 0.539854 1_4:+63531350 None:intergenic
GAAGGTTTAGCACTAGTGAA+TGG 0.540506 1_4:-63532013 Msa0176900:CDS
TGCTCCTCTACCTATTTGCT+AGG 0.540972 1_4:-63530643 Msa0176900:exon
ACTTCATCCTGGTCAAATTG+AGG 0.542522 1_4:-63531846 Msa0176900:CDS
AGAATCAACACATTGCTTCA+AGG 0.544518 1_4:-63532286 Msa0176900:CDS
CAATCCTAGCAAATAGGTAG+AGG 0.545332 1_4:+63530639 None:intergenic
CCTCCCACAGCCACAAGAGC+AGG 0.545619 1_4:-63532319 Msa0176900:CDS
AGGCCAGCAACATATGCTAA+AGG 0.547360 1_4:+63532151 None:intergenic
TCACAGCATTGTGTGATGGA+AGG 0.547593 1_4:-63530707 Msa0176900:CDS
TCAAATGGAGATAATAGCAA+TGG 0.548037 1_4:-63536892 Msa0176900:CDS
TGACCCTTTGAATTGGGGTA+TGG 0.549794 1_4:-63536812 Msa0176900:CDS
ATGTTATATTGTATAGGGGA+GGG 0.554537 1_4:+63537059 None:intergenic
ATGGTGAGTTGCATCCATCA+AGG 0.558706 1_4:-63531115 Msa0176900:CDS
GAAAATTAGGTCACCTGGTG+AGG 0.558787 1_4:-63530745 Msa0176900:CDS
CAGCCATACCCCAATTCAAA+GGG 0.559111 1_4:+63536809 None:intergenic
GCCAAGAGAATTCTCACAGT+TGG 0.559513 1_4:-63531143 Msa0176900:CDS
TTATGATGATGAAGAAATTG+AGG 0.560194 1_4:+63536939 None:intergenic
AATAAGTGGATTGTCATTCA+CGG 0.561129 1_4:+63531634 None:intergenic
AGAGGGTATGTAGCACTGCA+AGG 0.563580 1_4:+63531029 None:intergenic
AATTTCCAAGGTACACCGAT+TGG 0.566709 1_4:-63531578 Msa0176900:CDS
AAGGTTTATTGATCCCATGT+TGG 0.570229 1_4:-63530688 Msa0176900:CDS
ATACACCAATCGGTGTACCT+TGG 0.570750 1_4:+63531573 None:intergenic
TCTTCCATGAATCTTTGCAA+TGG 0.570876 1_4:-63536859 Msa0176900:CDS
CCTGCTCTTGTGGCTGTGGG+AGG 0.571117 1_4:+63532319 None:intergenic
ATTTGTGGGATATAGGTGAA+TGG 0.573685 1_4:+63537082 None:intergenic
TTGGCACAATGCTACTAAGA+AGG 0.573844 1_4:+63531232 None:intergenic
AATAAAGGGACTGATAGCTA+TGG 0.573860 1_4:-63536580 Msa0176900:CDS
ACGCAACAAAGATGATTGAG+AGG 0.576256 1_4:-63531667 Msa0176900:CDS
TTATCCATCGATACACCAAT+CGG 0.577310 1_4:+63531563 None:intergenic
CGGCGTGGCGGTTGAACTGG+CGG 0.577849 1_4:-63536656 Msa0176900:CDS
GCGGTTGCAACTCATAGTAC+CGG 0.581294 1_4:-63536676 Msa0176900:CDS
TGTGCCTTAGATCAATAGCT+TGG 0.582659 1_4:+63531213 None:intergenic
TAAAGAGGTGGAAAATGCTA+GGG 0.582840 1_4:-63530880 Msa0176900:CDS
CTCCTTTAGACAATCCAACA+TGG 0.584218 1_4:+63530674 None:intergenic
CATAAGTTGAAACTTCATCC+TGG 0.584696 1_4:-63531857 Msa0176900:CDS
AAGTTTACCAATGGAAGCAA+TGG 0.586687 1_4:+63531529 None:intergenic
GATAATAGCAATGGTTGTAA+CGG 0.587621 1_4:-63536883 Msa0176900:CDS
GCAGCCATACCCCAATTCAA+AGG 0.588052 1_4:+63536808 None:intergenic
TGATCATATTAGGAACTGAA+GGG 0.589476 1_4:+63530838 None:intergenic
GGTGAGAAAATTAGGTCACC+TGG 0.591426 1_4:-63530750 Msa0176900:CDS
GTCTCAGCTTCTGCATTAGA+GGG 0.593808 1_4:+63531012 None:intergenic
AGGTTTAACAATAGCACAAG+TGG 0.595101 1_4:-63536701 Msa0176900:CDS
TATTGATCTAAGGCACATTG+AGG 0.597254 1_4:-63531207 Msa0176900:CDS
ACCTTATCACATTCCTCACC+AGG 0.598892 1_4:+63530732 None:intergenic
TGTTGGATTGTCTAAAGGAG+TGG 0.600217 1_4:-63530671 Msa0176900:CDS
CCTAGATGAGGTGAAGCGTA+TGG 0.602524 1_4:-63536764 Msa0176900:CDS
TATGTTATATTGTATAGGGG+AGG 0.603340 1_4:+63537058 None:intergenic
CTTCATGGAGGAAATTTCCA+AGG 0.609850 1_4:-63531590 Msa0176900:CDS
TACACCGATTGGTGTATCGA+TGG 0.610433 1_4:-63531567 Msa0176900:CDS
ATAGCTATGGAGTGACCACT+GGG 0.616078 1_4:-63536567 Msa0176900:CDS
GAGGGTATGTAGCACTGCAA+GGG 0.617118 1_4:+63531030 None:intergenic
GTGAATGACATCTATAGCAA+CGG 0.618845 1_4:-63531482 Msa0176900:CDS
ATATATGTTATATTGTATAG+GGG 0.619769 1_4:+63537055 None:intergenic
TAAAGCTAGTAGTGATTGGG+TGG 0.624133 1_4:-63536614 Msa0176900:CDS
GCACAATGCTACTAAGAAGG+TGG 0.624197 1_4:+63531235 None:intergenic
GTACCTCTTAATGGAAGACA+TGG 0.627273 1_4:+63532199 None:intergenic
CGCAACAAAGATGATTGAGA+GGG 0.628498 1_4:-63531666 Msa0176900:CDS
GCAGCAGCCTCAATTTGACC+AGG 0.628904 1_4:+63531839 None:intergenic
CGTAATCCAAACTTGGATTG+CGG 0.630042 1_4:+63531435 None:intergenic
ATGGCTGCAGATTCTATGAA+GGG 0.630430 1_4:-63536793 Msa0176900:CDS
CGCCAGTTCAACCGCCACGC+CGG 0.633173 1_4:+63536657 None:intergenic
CAAAGGAGCAGAAATTGCAA+TGG 0.637084 1_4:-63531408 Msa0176900:CDS
AGCCACAAGAGCAGGCATGT+TGG 0.637350 1_4:-63532311 Msa0176900:CDS
AACTCATAGTACCGGCGTGG+CGG 0.639411 1_4:-63536668 Msa0176900:CDS
TCCTTTAGACAATCCAACAT+GGG 0.644402 1_4:+63530675 None:intergenic
TGTCGAATCACTTCAATCTG+CGG 0.647914 1_4:+63531689 None:intergenic
ATTGCAAAATGGTGATAAGG+AGG 0.652869 1_4:-63530970 Msa0176900:CDS
GAAGGGTAGTCACCTAGATG+AGG 0.661131 1_4:-63536776 Msa0176900:CDS
GAGTGGTGACAGGATTAGCA+AGG 0.667400 1_4:+63531360 None:intergenic
TGCAACTCATAGTACCGGCG+TGG 0.671857 1_4:-63536671 Msa0176900:CDS
ATCACTACTAGCTTTAACGG+CGG 0.674303 1_4:+63536621 None:intergenic
TTCAGCACTTTGAACATGAG+TGG 0.675639 1_4:+63531343 None:intergenic
TCACACAGAAGAACAAAACA+AGG 0.686755 1_4:-63536532 Msa0176900:CDS
AGGAATATGGCACTTCATGG+AGG 0.692048 1_4:-63531602 Msa0176900:CDS
GATTGTCTAAAGGAGTGGAA+TGG 0.692592 1_4:-63530666 Msa0176900:CDS
CGATTCGAACATCACCGCAG+TGG 0.703444 1_4:-63531718 Msa0176900:CDS
ATCTGCGGTCCAAGCCACTG+CGG 0.717350 1_4:+63531704 None:intergenic
CACAGAAGAACAAAACAAGG+TGG 0.749750 1_4:-63536529 Msa0176900:CDS
TGAGGTTGCACCAAACCCAG+TGG 0.771981 1_4:+63536552 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTAAAAAAAATATTT+AGG + chr1_4:63532997-63533016 None:intergenic 0.0%
!!! TATTTTTTTTAATTTATTTT+AGG - chr1_4:63533000-63533019 Msa0176900:intron 0.0%
!!! TAAATAAATATTTTGATCAT+AGG + chr1_4:63530556-63530575 None:intergenic 10.0%
!! TATATATGTTATATTGTATA+GGG + chr1_4:63530663-63530682 None:intergenic 10.0%
!!! TATATAAAAGTTGATTATTT+AGG + chr1_4:63532365-63532384 None:intergenic 10.0%
!! CTGTAAATTTATTATATAAA+AGG + chr1_4:63532456-63532475 None:intergenic 10.0%
!!! GAAATACTTAATATTTTATT+TGG + chr1_4:63533629-63533648 None:intergenic 10.0%
!! ATAAAAATAAAAAAAAACGA+AGG + chr1_4:63533681-63533700 None:intergenic 10.0%
!! AATAAATATGTATAAATGAA+GGG + chr1_4:63534562-63534581 None:intergenic 10.0%
!! AAATAAATATGTATAAATGA+AGG + chr1_4:63534563-63534582 None:intergenic 10.0%
!!! TTTATTTTTTTTTGGTTTGT+AGG + chr1_4:63530509-63530528 None:intergenic 15.0%
!! ATATATGTTATATTGTATAG+GGG + chr1_4:63530662-63530681 None:intergenic 15.0%
!! CTATATATGTTATATTGTAT+AGG + chr1_4:63530664-63530683 None:intergenic 15.0%
!! ATAATTAACAAATAAGATCA+TGG - chr1_4:63530794-63530813 Msa0176900:CDS 15.0%
!!! AATCTAGTTTTTAAAAATCA+TGG - chr1_4:63531609-63531628 Msa0176900:CDS 15.0%
!! ATATCACAACTTAATATTAT+AGG + chr1_4:63531721-63531740 None:intergenic 15.0%
!!! TTACGTCTAAAATATATTTT+GGG - chr1_4:63531839-63531858 Msa0176900:CDS 15.0%
!! AACTTATTTATAAAACAAGT+GGG + chr1_4:63532176-63532195 None:intergenic 15.0%
!! TAACTTATTTATAAAACAAG+TGG + chr1_4:63532177-63532196 None:intergenic 15.0%
!!! GATAGTTTTTTTTTTGTTTT+TGG + chr1_4:63532212-63532231 None:intergenic 15.0%
!! TTTATTTATTCCATAAACTT+AGG + chr1_4:63533314-63533333 None:intergenic 15.0%
!! AGTTTATGGAATAAATAAAA+TGG - chr1_4:63533315-63533334 Msa0176900:intron 15.0%
!! GTTTATGGAATAAATAAAAT+GGG - chr1_4:63533316-63533335 Msa0176900:intron 15.0%
!! TAACAGTAATAACTAATAAT+TGG + chr1_4:63533891-63533910 None:intergenic 15.0%
!! TAAAGATAAAACATATACAT+TGG - chr1_4:63534287-63534306 Msa0176900:intron 15.0%
!! AAATAAACATTACATGAAAA+AGG + chr1_4:63537153-63537172 None:intergenic 15.0%
!!! ATATTTTGATCATAGGAAAT+GGG + chr1_4:63530549-63530568 None:intergenic 20.0%
!!! AATATTTTGATCATAGGAAA+TGG + chr1_4:63530550-63530569 None:intergenic 20.0%
!! ATAAGATCACTTTATAAAGT+TGG + chr1_4:63531363-63531382 None:intergenic 20.0%
!! TGTAAAAAACATTTACCTTA+TGG - chr1_4:63531406-63531425 Msa0176900:CDS 20.0%
!! TTAATTGTTATGTAACCATA+AGG + chr1_4:63531424-63531443 None:intergenic 20.0%
!! TATCTTCTTGCTAAAATTAT+TGG + chr1_4:63531558-63531577 None:intergenic 20.0%
!!! TTGTAATTTTGACAAATCTA+TGG - chr1_4:63531639-63531658 Msa0176900:CDS 20.0%
!!! AATTTTATCAAATGCATGTA+TGG + chr1_4:63531672-63531691 None:intergenic 20.0%
!!! CTTACGTCTAAAATATATTT+TGG - chr1_4:63531838-63531857 Msa0176900:CDS 20.0%
!!! TACGTCTAAAATATATTTTG+GGG - chr1_4:63531840-63531859 Msa0176900:CDS 20.0%
!!! TATTTTAATATCTTGTGTCT+CGG - chr1_4:63531909-63531928 Msa0176900:CDS 20.0%
!!! GTTTTTAGTTGGTTTATTAA+TGG - chr1_4:63531931-63531950 Msa0176900:CDS 20.0%
!!! ATTTATATTTTCCCTTACTT+TGG - chr1_4:63531970-63531989 Msa0176900:CDS 20.0%
!!! TTTATATTTTCCCTTACTTT+GGG - chr1_4:63531971-63531990 Msa0176900:CDS 20.0%
!! TGTTCATAAAACGTAAAAAA+TGG - chr1_4:63532121-63532140 Msa0176900:CDS 20.0%
!! ATCATTAGGAAAAGAAATAT+AGG - chr1_4:63532287-63532306 Msa0176900:CDS 20.0%
!! AAATTATAGTTATAGTGCAA+AGG - chr1_4:63532838-63532857 Msa0176900:intron 20.0%
!!! ATACTAAATTTTCTAATGCA+AGG - chr1_4:63532876-63532895 Msa0176900:intron 20.0%
!! TATATTTACCTAACATTATG+AGG + chr1_4:63533112-63533131 None:intergenic 20.0%
!! TCGCAATGTAATAAATTATA+TGG + chr1_4:63533172-63533191 None:intergenic 20.0%
!!! TAAACTTAGGTATTGAATAA+TGG + chr1_4:63533301-63533320 None:intergenic 20.0%
!! TTATTCAATACCTAAGTTTA+TGG - chr1_4:63533301-63533320 Msa0176900:intron 20.0%
!! ATAAATAAAATGGGAAAAGA+TGG - chr1_4:63533325-63533344 Msa0176900:intron 20.0%
!! TAAATAAAATGGGAAAAGAT+GGG - chr1_4:63533326-63533345 Msa0176900:intron 20.0%
!!! TTTTAGTTACAAATTCATGA+CGG - chr1_4:63534058-63534077 Msa0176900:intron 20.0%
!! AAATGTGGTCAAAATATATT+AGG + chr1_4:63534150-63534169 None:intergenic 20.0%
!! TGTATATTAGTTGAAAAATG+TGG + chr1_4:63534165-63534184 None:intergenic 20.0%
!!! AATATCATATAAAGTGTCAT+TGG - chr1_4:63534194-63534213 Msa0176900:intron 20.0%
!! AATGTAGATAGACTAATTAA+TGG + chr1_4:63534386-63534405 None:intergenic 20.0%
!!! AGTCTATCTACATTTTATTA+TGG - chr1_4:63534392-63534411 Msa0176900:intron 20.0%
!! ATTTCTATATAAGAAACAAG+AGG + chr1_4:63534767-63534786 None:intergenic 20.0%
!! TAAGGAGTTGTTAAATTAAA+TGG - chr1_4:63534849-63534868 Msa0176900:intron 20.0%
!! AAAATGATTAAGAGTCAATT+AGG + chr1_4:63535084-63535103 None:intergenic 20.0%
!! TAATATTAATTCATCAGTTG+AGG - chr1_4:63535106-63535125 Msa0176900:intron 20.0%
!!! ATTATGGAACATATTTTAGA+TGG - chr1_4:63535899-63535918 Msa0176900:intron 20.0%
!!! AAAAAGAAAGTCTTTGAAAT+TGG + chr1_4:63537130-63537149 None:intergenic 20.0%
!!! TGTTTATTTTATGAAGATGT+TGG - chr1_4:63537164-63537183 Msa0176900:five_prime_UTR 20.0%
!!! GTTTATTTTATGAAGATGTT+GGG - chr1_4:63537165-63537184 Msa0176900:five_prime_UTR 20.0%
!! TTATGATGATGAAGAAATTG+AGG + chr1_4:63530778-63530797 None:intergenic 25.0%
!!! TGGTTGATAGTATGAATAAA+GGG - chr1_4:63531120-63531139 Msa0176900:CDS 25.0%
! AAATGAAAACTACAACATCT+TGG - chr1_4:63531517-63531536 Msa0176900:CDS 25.0%
! TATCGTATCTTAACATATGT+TGG - chr1_4:63531881-63531900 Msa0176900:CDS 25.0%
!! TAGTTGGTTTATTAATGGAT+TGG - chr1_4:63531936-63531955 Msa0176900:CDS 25.0%
!! TTATATTTTCCCTTACTTTG+GGG - chr1_4:63531972-63531991 Msa0176900:CDS 25.0%
!! ACAAACAAAAGCACAAAAAA+GGG + chr1_4:63532092-63532111 None:intergenic 25.0%
!! AACAAACAAAAGCACAAAAA+AGG + chr1_4:63532093-63532112 None:intergenic 25.0%
!!! TTATTTCTTTTGGGTTCAAA+TGG + chr1_4:63532241-63532260 None:intergenic 25.0%
! AACCCAAAAGAAATAAATGA+CGG - chr1_4:63532245-63532264 Msa0176900:CDS 25.0%
!! TTTTAGCACAAATCATCATT+AGG - chr1_4:63532273-63532292 Msa0176900:CDS 25.0%
! AATGTTATCCTCATAATGTT+AGG - chr1_4:63533101-63533120 Msa0176900:intron 25.0%
! AATTTATTACATTGCGAAAG+AGG - chr1_4:63533175-63533194 Msa0176900:intron 25.0%
! ATTTATTACATTGCGAAAGA+GGG - chr1_4:63533176-63533195 Msa0176900:intron 25.0%
! AAAAAAATCTTTCACATAGC+CGG - chr1_4:63533758-63533777 Msa0176900:intron 25.0%
!! TTTTCACTACAGTTATTAGA+CGG + chr1_4:63533797-63533816 None:intergenic 25.0%
!!! TTTGTTTTTGCTTATGTGTT+TGG - chr1_4:63533843-63533862 Msa0176900:intron 25.0%
!!! TTATGTGTTTGGTTTTAAGT+TGG - chr1_4:63533854-63533873 Msa0176900:intron 25.0%
! TCAAATAAGTCATCTATTAC+AGG + chr1_4:63534111-63534130 None:intergenic 25.0%
! TCAACTGTGTCAATTAATAT+GGG - chr1_4:63534324-63534343 Msa0176900:intron 25.0%
! ATTATGGTTATTATTCCTTC+AGG - chr1_4:63534408-63534427 Msa0176900:intron 25.0%
! TATGCAATTAAGTGTAGATA+TGG + chr1_4:63534457-63534476 None:intergenic 25.0%
! CTTAATTGCATAACTTTACA+TGG - chr1_4:63534465-63534484 Msa0176900:intron 25.0%
! TATGCAATTAAGTGTAGATA+TGG + chr1_4:63534457-63534476 None:intergenic 25.0%
! CTTAATTGCATAACTTTACA+TGG - chr1_4:63534465-63534484 Msa0176900:intron 25.0%
!!! TTTTAAGAGTTGTCAAAAAG+TGG + chr1_4:63534609-63534628 None:intergenic 25.0%
! TCATCAAAGTTGTCTAATTT+GGG - chr1_4:63534725-63534744 Msa0176900:intron 25.0%
!! TGTTGAATTCAGTTTTCATA+AGG - chr1_4:63534805-63534824 Msa0176900:intron 25.0%
! TGCCATTAATTTAATGTACT+TGG - chr1_4:63534929-63534948 Msa0176900:intron 25.0%
! GTCCAAGTACATTAAATTAA+TGG + chr1_4:63534934-63534953 None:intergenic 25.0%
!! ACAACAATTTTGTTCCATAA+AGG + chr1_4:63534970-63534989 None:intergenic 25.0%
!!! ACAAAATTGTTGTTTTGACT+CGG - chr1_4:63534977-63534996 Msa0176900:intron 25.0%
! AAATTTACTAGTTGTTCTCT+CGG - chr1_4:63535769-63535788 Msa0176900:intron 25.0%
! GTTTCAACTTATGAATCAAA+TGG + chr1_4:63535850-63535869 None:intergenic 25.0%
! AGATGGAAGTTATTATCTTA+AGG - chr1_4:63535916-63535935 Msa0176900:intron 25.0%
! TATTGATGTTTCAAGGAATA+TGG - chr1_4:63536099-63536118 Msa0176900:intron 25.0%
! AAGTTCATAAGAGAAACTTT+AGG - chr1_4:63536925-63536944 Msa0176900:five_prime_UTR 25.0%
! AGTTCATAAGAGAAACTTTA+GGG - chr1_4:63536926-63536945 Msa0176900:five_prime_UTR 25.0%
AAAAACGGAAAGGATTAATG+TGG + chr1_4:63530595-63530614 None:intergenic 30.0%
GTTAGGAATTGTGACAAAAA+CGG + chr1_4:63530610-63530629 None:intergenic 30.0%
ATGTTATATTGTATAGGGGA+GGG + chr1_4:63530658-63530677 None:intergenic 30.0%
TATGTTATATTGTATAGGGG+AGG + chr1_4:63530659-63530678 None:intergenic 30.0%
! AAGATCATGGAGTTTTCAAA+TGG - chr1_4:63530807-63530826 Msa0176900:CDS 30.0%
TCAAATGGAGATAATAGCAA+TGG - chr1_4:63530822-63530841 Msa0176900:CDS 30.0%
GATAATAGCAATGGTTGTAA+CGG - chr1_4:63530831-63530850 Msa0176900:CDS 30.0%
!! GTGGTTGATAGTATGAATAA+AGG - chr1_4:63531119-63531138 Msa0176900:CDS 30.0%
ACCCAAAAGAAATAAATGAC+GGG - chr1_4:63532246-63532265 Msa0176900:CDS 30.0%
!! ACCCGTCATTTATTTCTTTT+GGG + chr1_4:63532250-63532269 None:intergenic 30.0%
!! AACCCGTCATTTATTTCTTT+TGG + chr1_4:63532251-63532270 None:intergenic 30.0%
TGTTAAGGGAAATATGTGAT+CGG - chr1_4:63532394-63532413 Msa0176900:intron 30.0%
! ATACAAAGGACACTGATTAA+GGG + chr1_4:63532933-63532952 None:intergenic 30.0%
! TATACAAAGGACACTGATTA+AGG + chr1_4:63532934-63532953 None:intergenic 30.0%
TAGTCTATAGACCCTTAATT+AGG - chr1_4:63532952-63532971 Msa0176900:intron 30.0%
TTAACCAGTGTCCTAATTAA+GGG + chr1_4:63532966-63532985 None:intergenic 30.0%
ATTGATTGATTGATACCACT+AGG + chr1_4:63533065-63533084 None:intergenic 30.0%
TTTATTACATTGCGAAAGAG+GGG - chr1_4:63533177-63533196 Msa0176900:intron 30.0%
ACTTTATGGGGAAAATACTT+GGG + chr1_4:63533562-63533581 None:intergenic 30.0%
GCTGTATGAATGACTTATAA+AGG - chr1_4:63533918-63533937 Msa0176900:intron 30.0%
ATAAGTCATCTATTACAGGA+GGG + chr1_4:63534107-63534126 None:intergenic 30.0%
AATAAGTCATCTATTACAGG+AGG + chr1_4:63534108-63534127 None:intergenic 30.0%
GTCAACTGTGTCAATTAATA+TGG - chr1_4:63534323-63534342 Msa0176900:intron 30.0%
! CAATTTTCTCTTCTTGTGAT+TGG + chr1_4:63534701-63534720 None:intergenic 30.0%
CAATCACAAGAAGAGAAAAT+TGG - chr1_4:63534699-63534718 Msa0176900:intron 30.0%
GTCATCAAAGTTGTCTAATT+TGG - chr1_4:63534724-63534743 Msa0176900:intron 30.0%
!! ATCCTTGTTGTTTATGTTTG+TGG - chr1_4:63535019-63535038 Msa0176900:intron 30.0%
ATGAATAAATTGTGACAGCT+AGG + chr1_4:63535061-63535080 None:intergenic 30.0%
CTTAACACAATTGTTTGACT+TGG - chr1_4:63535143-63535162 Msa0176900:intron 30.0%
CTTGGCATGAATTAATCATT+TGG - chr1_4:63535161-63535180 Msa0176900:intron 30.0%
! TTTCTGAATGCTGGAATTTT+CGG - chr1_4:63535344-63535363 Msa0176900:intron 30.0%
! AGGAATCAGATTTGAAATCA+TGG - chr1_4:63535457-63535476 Msa0176900:intron 30.0%
! AATTTGGCCTTCCAATTAAA+AGG + chr1_4:63535586-63535605 None:intergenic 30.0%
AGGCCAAATTCAAAATCTAT+TGG - chr1_4:63535596-63535615 Msa0176900:intron 30.0%
! GGTCCAATAGATTTTGAATT+TGG + chr1_4:63535602-63535621 None:intergenic 30.0%
TCAAAATCTATTGGACCTAA+TGG - chr1_4:63535605-63535624 Msa0176900:intron 30.0%
!! AATAAGTGGATTGTCATTCA+CGG + chr1_4:63536083-63536102 None:intergenic 30.0%
ATCCACTTATTGATGTTTCA+AGG - chr1_4:63536092-63536111 Msa0176900:intron 30.0%
TTCCTTGAAACATCAATAAG+TGG + chr1_4:63536097-63536116 None:intergenic 30.0%
AGCAAACATAAGTTTACCAA+TGG + chr1_4:63536197-63536216 None:intergenic 30.0%
!! GTATTGAAGTTCTGAACAAT+AGG + chr1_4:63536335-63536354 None:intergenic 30.0%
AACCAAGATGTTAACTCTTT+AGG - chr1_4:63536400-63536419 Msa0176900:intron 30.0%
GATTTACTCAATGTTGTTGA+AGG - chr1_4:63536634-63536653 Msa0176900:CDS 30.0%
TGATCATATTAGGAACTGAA+GGG + chr1_4:63536879-63536898 None:intergenic 30.0%
TTGATCATATTAGGAACTGA+AGG + chr1_4:63536880-63536899 None:intergenic 30.0%
TTCAGTTCCTAATATGATCA+AGG - chr1_4:63536879-63536898 Msa0176900:CDS 30.0%
CTACATTCCTTGATCATATT+AGG + chr1_4:63536889-63536908 None:intergenic 30.0%
TCTCTTATGAACTTGTACAA+TGG + chr1_4:63536919-63536938 None:intergenic 30.0%
TGATCATAGGAAATGGGAAA+TGG + chr1_4:63530543-63530562 None:intergenic 35.0%
GAATTGTGACAAAAACGGAA+AGG + chr1_4:63530605-63530624 None:intergenic 35.0%
ATTTGTGGGATATAGGTGAA+TGG + chr1_4:63530635-63530654 None:intergenic 35.0%
GAAGAAATTGAGGCTGATTA+AGG + chr1_4:63530768-63530787 None:intergenic 35.0%
TCTTCCATGAATCTTTGCAA+TGG - chr1_4:63530855-63530874 Msa0176900:CDS 35.0%
ACAACAATGACCCTTTGAAT+TGG - chr1_4:63530895-63530914 Msa0176900:CDS 35.0%
CAACAATGACCCTTTGAATT+GGG - chr1_4:63530896-63530915 Msa0176900:CDS 35.0%
AACAATGACCCTTTGAATTG+GGG - chr1_4:63530897-63530916 Msa0176900:CDS 35.0%
! GTTAAACCTTTTCCACCTAA+GGG + chr1_4:63531002-63531021 None:intergenic 35.0%
! TGTTAAACCTTTTCCACCTA+AGG + chr1_4:63531003-63531022 None:intergenic 35.0%
AGGTTTAACAATAGCACAAG+TGG - chr1_4:63531013-63531032 Msa0176900:CDS 35.0%
!! CCAATCACTACTAGCTTTAA+CGG + chr1_4:63531099-63531118 None:intergenic 35.0%
CGTTAAAGCTAGTAGTGATT+GGG - chr1_4:63531097-63531116 Msa0176900:CDS 35.0%
AATAAAGGGACTGATAGCTA+TGG - chr1_4:63531134-63531153 Msa0176900:CDS 35.0%
!! TTGTTTTGTTCTTCTGTGTG+AGG + chr1_4:63531183-63531202 None:intergenic 35.0%
TCACACAGAAGAACAAAACA+AGG - chr1_4:63531182-63531201 Msa0176900:CDS 35.0%
TATGTGAAACTTGTGATCGA+GGG - chr1_4:63532145-63532164 Msa0176900:CDS 35.0%
GTTAAGGGAAATATGTGATC+GGG - chr1_4:63532395-63532414 Msa0176900:intron 35.0%
AGGGTCTATAGACTATACAA+AGG + chr1_4:63532947-63532966 None:intergenic 35.0%
GTTAACCAGTGTCCTAATTA+AGG + chr1_4:63532967-63532986 None:intergenic 35.0%
CGATTTCACTCGCAAATAAA+TGG + chr1_4:63533229-63533248 None:intergenic 35.0%
TTTATTTGCGAGTGAAATCG+TGG - chr1_4:63533229-63533248 Msa0176900:intron 35.0%
ACAACACATACAACACATCT+GGG - chr1_4:63533478-63533497 Msa0176900:intron 35.0%
CACTTTATGGGGAAAATACT+TGG + chr1_4:63533563-63533582 None:intergenic 35.0%
CATGAATTCAGCACTTTATG+GGG + chr1_4:63533574-63533593 None:intergenic 35.0%
GCATGAATTCAGCACTTTAT+GGG + chr1_4:63533575-63533594 None:intergenic 35.0%
TGCATGAATTCAGCACTTTA+TGG + chr1_4:63533576-63533595 None:intergenic 35.0%
CACTTCTACTGTTGAATGAA+TGG + chr1_4:63533953-63533972 None:intergenic 35.0%
TAGTTACAAATTCATGACGG+TGG - chr1_4:63534061-63534080 Msa0176900:intron 35.0%
AGTTACAAATTCATGACGGT+GGG - chr1_4:63534062-63534081 Msa0176900:intron 35.0%
CTGTGTCAATTAATATGGGA+CGG - chr1_4:63534328-63534347 Msa0176900:intron 35.0%
! ACGGAGGGAGTATATTATAA+TGG - chr1_4:63534347-63534366 Msa0176900:intron 35.0%
TTTCATAAGGCAGAACATCA+AGG - chr1_4:63534818-63534837 Msa0176900:intron 35.0%
TTCATAAGGCAGAACATCAA+GGG - chr1_4:63534819-63534838 Msa0176900:intron 35.0%
AACATCAAGGGATGTTCATA+AGG - chr1_4:63534831-63534850 Msa0176900:intron 35.0%
! GAATTGTACACTCATTTTGC+AGG - chr1_4:63534880-63534899 Msa0176900:intron 35.0%
! ATTTTGCAGGCTTGATGTTT+TGG - chr1_4:63534893-63534912 Msa0176900:intron 35.0%
CAGTTACAGTTGTACCTTTA+TGG - chr1_4:63534953-63534972 Msa0176900:intron 35.0%
AGCCACAAACATAAACAACA+AGG + chr1_4:63535024-63535043 None:intergenic 35.0%
ATTCAGAATGAAGACGTGTT+TGG + chr1_4:63535266-63535285 None:intergenic 35.0%
ACGTCTTCATTCTGAATTGT+TGG - chr1_4:63535269-63535288 Msa0176900:intron 35.0%
AGAATCAACACATTGCTTCA+AGG - chr1_4:63535428-63535447 Msa0176900:intron 35.0%
ACATTGCTTCAAGGATATTC+AGG - chr1_4:63535437-63535456 Msa0176900:intron 35.0%
!! GAAGACATGGTGTTATGTTA+TGG + chr1_4:63535505-63535524 None:intergenic 35.0%
ATTCCTTTAGCATATGTTGC+TGG - chr1_4:63535560-63535579 Msa0176900:intron 35.0%
!!! TATGTTGCTGGCCTTTTAAT+TGG - chr1_4:63535572-63535591 Msa0176900:intron 35.0%
!! ACAAGTTCTGAATGCTAAAG+AGG - chr1_4:63535628-63535647 Msa0176900:intron 35.0%
!! TTTGAGTTGCAACCTAAAGA+AGG - chr1_4:63535683-63535702 Msa0176900:intron 35.0%
ACTAGTGCTAAACCTTCTTT+AGG + chr1_4:63535698-63535717 None:intergenic 35.0%
ATCAAATGGTCAGTGAATTG+AGG + chr1_4:63535836-63535855 None:intergenic 35.0%
! CATAAGTTGAAACTTCATCC+TGG - chr1_4:63535857-63535876 Msa0176900:intron 35.0%
! ATCGCGTATCTATCTTGTTT+AGG + chr1_4:63535980-63535999 None:intergenic 35.0%
TTATCCATCGATACACCAAT+CGG + chr1_4:63536154-63536173 None:intergenic 35.0%
AAGTTTACCAATGGAAGCAA+TGG + chr1_4:63536188-63536207 None:intergenic 35.0%
GTGAATGACATCTATAGCAA+CGG - chr1_4:63536232-63536251 Msa0176900:intron 35.0%
AGCCTAAAGAGTTAACATCT+TGG + chr1_4:63536405-63536424 None:intergenic 35.0%
! TATTGATCTAAGGCACATTG+AGG - chr1_4:63536507-63536526 Msa0176900:CDS 35.0%
GTTGATCATGCATTGCAAAA+TGG - chr1_4:63536733-63536752 Msa0176900:CDS 35.0%
TGCATTGCAAAATGGTGATA+AGG - chr1_4:63536741-63536760 Msa0176900:CDS 35.0%
ATTGCAAAATGGTGATAAGG+AGG - chr1_4:63536744-63536763 Msa0176900:CDS 35.0%
! ACCTCCATTTTCCAAAAGAT+TGG - chr1_4:63536778-63536797 Msa0176900:CDS 35.0%
!! TCCAATCTTTTGGAAAATGG+AGG + chr1_4:63536782-63536801 None:intergenic 35.0%
!! AGCTCCAATCTTTTGGAAAA+TGG + chr1_4:63536785-63536804 None:intergenic 35.0%
TAAAGAGGTGGAAAATGCTA+GGG - chr1_4:63536834-63536853 Msa0176900:CDS 35.0%
AAGGTTTATTGATCCCATGT+TGG - chr1_4:63537026-63537045 Msa0176900:five_prime_UTR 35.0%
TCCTTTAGACAATCCAACAT+GGG + chr1_4:63537042-63537061 None:intergenic 35.0%
GATATAGGTGAATGGCAGTT+AGG + chr1_4:63530627-63530646 None:intergenic 40.0%
TCCATGAATCTTTGCAATGG+TGG - chr1_4:63530858-63530877 Msa0176900:CDS 40.0%
TCCACCATTGCAAAGATTCA+TGG + chr1_4:63530862-63530881 None:intergenic 40.0%
! CAAAGGGTCATTGTTGTTAC+TGG + chr1_4:63530892-63530911 None:intergenic 40.0%
TATGGCTGCAGATTCTATGA+AGG - chr1_4:63530920-63530939 Msa0176900:CDS 40.0%
ATGGCTGCAGATTCTATGAA+GGG - chr1_4:63530921-63530940 Msa0176900:CDS 40.0%
!! ATCACTACTAGCTTTAACGG+CGG + chr1_4:63531096-63531115 None:intergenic 40.0%
CCGTTAAAGCTAGTAGTGAT+TGG - chr1_4:63531096-63531115 Msa0176900:CDS 40.0%
TAAAGCTAGTAGTGATTGGG+TGG - chr1_4:63531100-63531119 Msa0176900:CDS 40.0%
CACAGAAGAACAAAACAAGG+TGG - chr1_4:63531185-63531204 Msa0176900:CDS 40.0%
CCTGATGAGTTCACTTTGAA+GGG + chr1_4:63531213-63531232 None:intergenic 40.0%
ACCTGATGAGTTCACTTTGA+AGG + chr1_4:63531214-63531233 None:intergenic 40.0%
!!! CTTGTGTCTCGGTTTTTAGT+TGG - chr1_4:63531920-63531939 Msa0176900:CDS 40.0%
!!! ATTTTCCCTTACTTTGGGGT+AGG - chr1_4:63531976-63531995 Msa0176900:CDS 40.0%
AACTTCATCAAGCAGATCAC+TGG + chr1_4:63532009-63532028 None:intergenic 40.0%
GTGATCTGCTTGATGAAGTT+AGG - chr1_4:63532009-63532028 Msa0176900:CDS 40.0%
GCTTGATGAAGTTAGGTAGA+AGG - chr1_4:63532016-63532035 Msa0176900:CDS 40.0%
CTATGTGAAACTTGTGATCG+AGG - chr1_4:63532144-63532163 Msa0176900:CDS 40.0%
TATGTGATCGGGAATGAGAT+CGG - chr1_4:63532406-63532425 Msa0176900:intron 40.0%
TAGACCCTTAATTAGGACAC+TGG - chr1_4:63532959-63532978 Msa0176900:intron 40.0%
! TATTGTTTGAAACCGCCTAG+TGG - chr1_4:63533047-63533066 Msa0176900:intron 40.0%
GATTGATTGATACCACTAGG+CGG + chr1_4:63533062-63533081 None:intergenic 40.0%
ATGGTGTGTAAGAGGTGAAT+GGG + chr1_4:63533369-63533388 None:intergenic 40.0%
TATGGTGTGTAAGAGGTGAA+TGG + chr1_4:63533370-63533389 None:intergenic 40.0%
ACCTCTTACACACCATAAAG+CGG - chr1_4:63533373-63533392 Msa0176900:intron 40.0%
TGTCACCGTGACATTAAATC+TGG - chr1_4:63533417-63533436 Msa0176900:intron 40.0%
GTCACCGTGACATTAAATCT+GGG - chr1_4:63533418-63533437 Msa0176900:intron 40.0%
ACACATTGCCACACAATATC+TGG - chr1_4:63533450-63533469 Msa0176900:intron 40.0%
CACATTGCCACACAATATCT+GGG - chr1_4:63533451-63533470 Msa0176900:intron 40.0%
GATGTGTTGTATGTGTTGTG+TGG + chr1_4:63533477-63533496 None:intergenic 40.0%
CACAACACATACAACACATC+TGG - chr1_4:63533477-63533496 Msa0176900:intron 40.0%
CACAAAGATGTTGTGTTGTG+TGG + chr1_4:63533504-63533523 None:intergenic 40.0%
CACAACACAACATCTTTGTG+TGG - chr1_4:63533504-63533523 Msa0176900:intron 40.0%
GTCACCGTGACATTAAATCT+GGG + chr1_4:63533418-63533437 None:intergenic 40.0%
AGTCACCGTGACATTAAATC+TGG + chr1_4:63533531-63533550 None:intergenic 40.0%
CACTACAGTTATTAGACGGT+TGG + chr1_4:63533793-63533812 None:intergenic 40.0%
!! AACAGTAGAAGTGTCAGTGT+CGG - chr1_4:63533960-63533979 Msa0176900:intron 40.0%
!! AGGGAGTATTGTGCAATTTC+TGG + chr1_4:63534088-63534107 None:intergenic 40.0%
TGTCAATTAATATGGGACGG+AGG - chr1_4:63534331-63534350 Msa0176900:intron 40.0%
GTCAATTAATATGGGACGGA+GGG - chr1_4:63534332-63534351 Msa0176900:intron 40.0%
!! TTTGACTCGGCATGATGATT+TGG - chr1_4:63534990-63535009 Msa0176900:intron 40.0%
!! AATGAAGACGTGTTTGGTGT+CGG + chr1_4:63535260-63535279 None:intergenic 40.0%
TGCAACAGATTTCTGAATGC+TGG - chr1_4:63535335-63535354 Msa0176900:intron 40.0%
! AATGCTGGAATTTTCGGCAA+TGG - chr1_4:63535350-63535369 Msa0176900:intron 40.0%
ACACCATGTCTTCCATTAAG+AGG - chr1_4:63535512-63535531 Msa0176900:intron 40.0%
GTACCTCTTAATGGAAGACA+TGG + chr1_4:63535518-63535537 None:intergenic 40.0%
GCAGTGATTGTACCTCTTAA+TGG + chr1_4:63535527-63535546 None:intergenic 40.0%
!!! TTGCTGGCCTTTTAATTGGA+AGG - chr1_4:63535576-63535595 Msa0176900:intron 40.0%
GCATTCAGAACTTGTCCATT+AGG + chr1_4:63535623-63535642 None:intergenic 40.0%
! AAAGAGGCTTTTCAACTAGC+TGG - chr1_4:63535644-63535663 Msa0176900:intron 40.0%
CAACTAGCTGGAATTGAAAC+TGG - chr1_4:63535656-63535675 Msa0176900:intron 40.0%
GAAGGTTTAGCACTAGTGAA+TGG - chr1_4:63535701-63535720 Msa0176900:intron 40.0%
! ACTTTTGTCTGCGATTTTCG+CGG - chr1_4:63535793-63535812 Msa0176900:intron 40.0%
! ATTTTCGCGGAAGTTATGCT+AGG - chr1_4:63535806-63535825 Msa0176900:intron 40.0%
ACTTCATCCTGGTCAAATTG+AGG - chr1_4:63535868-63535887 Msa0176900:intron 40.0%
AATTGAGGCTGCTGCTATTA+TGG - chr1_4:63535883-63535902 Msa0176900:intron 40.0%
! TCTTGTTTAGGCTTCTGAAG+TGG + chr1_4:63535968-63535987 None:intergenic 40.0%
TGTCGAATCACTTCAATCTG+CGG + chr1_4:63536028-63536047 None:intergenic 40.0%
ACGCAACAAAGATGATTGAG+AGG - chr1_4:63536047-63536066 Msa0176900:intron 40.0%
CGCAACAAAGATGATTGAGA+GGG - chr1_4:63536048-63536067 Msa0176900:intron 40.0%
TCAAGGAATATGGCACTTCA+TGG - chr1_4:63536109-63536128 Msa0176900:intron 40.0%
CTTCATGGAGGAAATTTCCA+AGG - chr1_4:63536124-63536143 Msa0176900:intron 40.0%
AATTTCCAAGGTACACCGAT+TGG - chr1_4:63536136-63536155 Msa0176900:intron 40.0%
CGTAATCCAAACTTGGATTG+CGG + chr1_4:63536282-63536301 None:intergenic 40.0%
CGCAATCCAAGTTTGGATTA+CGG - chr1_4:63536280-63536299 Msa0176900:intron 40.0%
TTGAAGCCGTAATCCAAACT+TGG + chr1_4:63536289-63536308 None:intergenic 40.0%
AGTTTGGATTACGGCTTCAA+AGG - chr1_4:63536289-63536308 Msa0176900:intron 40.0%
CAAAGGAGCAGAAATTGCAA+TGG - chr1_4:63536306-63536325 Msa0176900:intron 40.0%
TTCAGCACTTTGAACATGAG+TGG + chr1_4:63536374-63536393 None:intergenic 40.0%
TTGGCACAATGCTACTAAGA+AGG + chr1_4:63536485-63536504 None:intergenic 40.0%
TGTGCCAAGCTATTGATCTA+AGG - chr1_4:63536497-63536516 Msa0176900:intron 40.0%
TGTGCCTTAGATCAATAGCT+TGG + chr1_4:63536504-63536523 None:intergenic 40.0%
ACCAACTGTGAGAATTCTCT+TGG + chr1_4:63536575-63536594 None:intergenic 40.0%
!! ATTCTCACAGTTGGTGTCAA+TGG - chr1_4:63536580-63536599 Msa0176900:CDS 40.0%
!! TCCATCAAGGTTTTGTGAGA+AGG - chr1_4:63536612-63536631 Msa0176900:CDS 40.0%
TCCTTCTCACAAAACCTTGA+TGG + chr1_4:63536616-63536635 None:intergenic 40.0%
! CCTCAAAAGCTCCAATCTTT+TGG + chr1_4:63536792-63536811 None:intergenic 40.0%
! CCAAAAGATTGGAGCTTTTG+AGG - chr1_4:63536789-63536808 Msa0176900:CDS 40.0%
! TAAGACCCTTTTGCCTAAAG+AGG - chr1_4:63536819-63536838 Msa0176900:CDS 40.0%
TTCCACCTCTTTAGGCAAAA+GGG + chr1_4:63536827-63536846 None:intergenic 40.0%
TTTCCACCTCTTTAGGCAAA+AGG + chr1_4:63536828-63536847 None:intergenic 40.0%
! CTAGCATTTTCCACCTCTTT+AGG + chr1_4:63536835-63536854 None:intergenic 40.0%
CTAAAGAGGTGGAAAATGCT+AGG - chr1_4:63536833-63536852 Msa0176900:CDS 40.0%
!! GCTAGGGTTCAAGTTGAAAA+TGG - chr1_4:63536850-63536869 Msa0176900:CDS 40.0%
TGCTGACAGGTGAGAAAATT+AGG - chr1_4:63536956-63536975 Msa0176900:five_prime_UTR 40.0%
! GTTTTCACAGCATTGTGTGA+TGG - chr1_4:63537003-63537022 Msa0176900:five_prime_UTR 40.0%
TCCCATGTTGGATTGTCTAA+AGG - chr1_4:63537038-63537057 Msa0176900:five_prime_UTR 40.0%
CTCCTTTAGACAATCCAACA+TGG + chr1_4:63537043-63537062 None:intergenic 40.0%
TGTTGGATTGTCTAAAGGAG+TGG - chr1_4:63537043-63537062 Msa0176900:five_prime_UTR 40.0%
GATTGTCTAAAGGAGTGGAA+TGG - chr1_4:63537048-63537067 Msa0176900:five_prime_UTR 40.0%
CAATCCTAGCAAATAGGTAG+AGG + chr1_4:63537078-63537097 None:intergenic 40.0%
GTAGCACAATCCTAGCAAAT+AGG + chr1_4:63537084-63537103 None:intergenic 40.0%
TGTATAGGGGAGGGATTTGT+GGG + chr1_4:63530649-63530668 None:intergenic 45.0%
TTGTATAGGGGAGGGATTTG+TGG + chr1_4:63530650-63530669 None:intergenic 45.0%
TGACCCTTTGAATTGGGGTA+TGG - chr1_4:63530902-63530921 Msa0176900:CDS 45.0%
CAGCCATACCCCAATTCAAA+GGG + chr1_4:63530908-63530927 None:intergenic 45.0%
AGCGTATGGTAGAGGAATAC+CGG - chr1_4:63530964-63530983 Msa0176900:CDS 45.0%
AACAATAGCACAAGTGGCTG+CGG - chr1_4:63531019-63531038 Msa0176900:CDS 45.0%
ATAGCTATGGAGTGACCACT+GGG - chr1_4:63531147-63531166 Msa0176900:CDS 45.0%
CCCTTCAAAGTGAACTCATC+AGG - chr1_4:63531210-63531229 Msa0176900:CDS 45.0%
ACACACCTACCCCAAAGTAA+GGG + chr1_4:63531984-63532003 None:intergenic 45.0%
AACACACCTACCCCAAAGTA+AGG + chr1_4:63531985-63532004 None:intergenic 45.0%
ATGTGATCGGGAATGAGATC+GGG - chr1_4:63532407-63532426 Msa0176900:intron 45.0%
TGTAGATCACCTTGCAGCTA+TGG - chr1_4:63533257-63533276 Msa0176900:intron 45.0%
CATGCAATTCCATAGCTGCA+AGG + chr1_4:63533269-63533288 None:intergenic 45.0%
TGGTGTGTAAGAGGTGAATG+GGG + chr1_4:63533368-63533387 None:intergenic 45.0%
CCTCTTACACACCATAAAGC+GGG - chr1_4:63533374-63533393 Msa0176900:intron 45.0%
CTCTTACACACCATAAAGCG+GGG - chr1_4:63533375-63533394 Msa0176900:intron 45.0%
GTGGCCCAGATTTAATGTCA+CGG + chr1_4:63533523-63533542 None:intergenic 45.0%
GTGGCCCAGATTTAATGTCA+CGG - chr1_4:63533523-63533542 Msa0176900:intron 45.0%
TTCCTTCAGGTCCATCTACA+TGG - chr1_4:63534421-63534440 Msa0176900:intron 45.0%
TACCATGTAGATGGACCTGA+AGG + chr1_4:63534426-63534445 None:intergenic 45.0%
GTGCTATGCTACCATGTAGA+TGG + chr1_4:63534435-63534454 None:intergenic 45.0%
! AGAGGTACAATCACTGCATC+AGG - chr1_4:63535530-63535549 Msa0176900:intron 45.0%
AGGCCAGCAACATATGCTAA+AGG + chr1_4:63535566-63535585 None:intergenic 45.0%
CTAGTGAATGGTACTGCAGT+TGG - chr1_4:63535713-63535732 Msa0176900:intron 45.0%
AATGGTACTGCAGTTGGATC+AGG - chr1_4:63535719-63535738 Msa0176900:intron 45.0%
TACTGCAGTTGGATCAGGTT+TGG - chr1_4:63535724-63535743 Msa0176900:intron 45.0%
! TGGATCAGGTTTGGCTTCAT+TGG - chr1_4:63535733-63535752 Msa0176900:intron 45.0%
AGGAATATGGCACTTCATGG+AGG - chr1_4:63536112-63536131 Msa0176900:intron 45.0%
ATACACCAATCGGTGTACCT+TGG + chr1_4:63536144-63536163 None:intergenic 45.0%
! TACACCGATTGGTGTATCGA+TGG - chr1_4:63536147-63536166 Msa0176900:intron 45.0%
CGTTTAGCCATTGCTTCCAT+TGG - chr1_4:63536178-63536197 Msa0176900:intron 45.0%
CTTTGAACATGAGTGGTGAC+AGG + chr1_4:63536367-63536386 None:intergenic 45.0%
GCACAATGCTACTAAGAAGG+TGG + chr1_4:63536482-63536501 None:intergenic 45.0%
GCCAAGAGAATTCTCACAGT+TGG - chr1_4:63536571-63536590 Msa0176900:CDS 45.0%
ATGGTGAGTTGCATCCATCA+AGG - chr1_4:63536599-63536618 Msa0176900:CDS 45.0%
GTCTCAGCTTCTGCATTAGA+GGG + chr1_4:63536705-63536724 None:intergenic 45.0%
TGTCTCAGCTTCTGCATTAG+AGG + chr1_4:63536706-63536725 None:intergenic 45.0%
!! TTAGGGACAAGTTTGCTGAC+AGG - chr1_4:63536943-63536962 Msa0176900:five_prime_UTR 45.0%
GGTGAGAAAATTAGGTCACC+TGG - chr1_4:63536964-63536983 Msa0176900:five_prime_UTR 45.0%
GAAAATTAGGTCACCTGGTG+AGG - chr1_4:63536969-63536988 Msa0176900:five_prime_UTR 45.0%
ACCTGGTGAGGAATGTGATA+AGG - chr1_4:63536981-63537000 Msa0176900:five_prime_UTR 45.0%
ACCTTATCACATTCCTCACC+AGG + chr1_4:63536985-63537004 None:intergenic 45.0%
! TCACAGCATTGTGTGATGGA+AGG - chr1_4:63537007-63537026 Msa0176900:five_prime_UTR 45.0%
TGCTCCTCTACCTATTTGCT+AGG - chr1_4:63537071-63537090 Msa0176900:five_prime_UTR 45.0%
!!! AGTATTTTTTTATTTTTTTT+TGG + chr1_4:63530517-63530536 None:intergenic 5.0%
!! TATATAATTAATTTATGTTA+AGG - chr1_4:63532379-63532398 Msa0176900:intron 5.0%
!! ATATAATTAATTTATGTTAA+GGG - chr1_4:63532380-63532399 Msa0176900:intron 5.0%
!!! AAATACTTAATATTTTATTT+GGG + chr1_4:63533628-63533647 None:intergenic 5.0%
!! ATTATAACAATATTAAATAT+GGG + chr1_4:63534535-63534554 None:intergenic 5.0%
!! AATTATAACAATATTAAATA+TGG + chr1_4:63534536-63534555 None:intergenic 5.0%
GGGAGGGATTTGTGGGATAT+AGG + chr1_4:63530642-63530661 None:intergenic 50.0%
GCAGCCATACCCCAATTCAA+AGG + chr1_4:63530909-63530928 None:intergenic 50.0%
GAAGGGTAGTCACCTAGATG+AGG - chr1_4:63530938-63530957 Msa0176900:CDS 50.0%
CCATACGCTTCACCTCATCT+AGG + chr1_4:63530953-63530972 None:intergenic 50.0%
CCTAGATGAGGTGAAGCGTA+TGG - chr1_4:63530950-63530969 Msa0176900:CDS 50.0%
TGAGGTGAAGCGTATGGTAG+AGG - chr1_4:63530956-63530975 Msa0176900:CDS 50.0%
GGTAGAGGAATACCGGAAAC+CGG - chr1_4:63530971-63530990 Msa0176900:CDS 50.0%
! TTTCCACCTAAGGGCACAAC+CGG + chr1_4:63530993-63531012 None:intergenic 50.0%
GTTGTGCCCTTAGGTGGAAA+AGG - chr1_4:63530993-63531012 Msa0176900:CDS 50.0%
GCGGTTGCAACTCATAGTAC+CGG - chr1_4:63531038-63531057 Msa0176900:CDS 50.0%
GATAGCTATGGAGTGACCAC+TGG - chr1_4:63531146-63531165 Msa0176900:CDS 50.0%
TATGGAGTGACCACTGGGTT+TGG - chr1_4:63531152-63531171 Msa0176900:CDS 50.0%
TGTGTAAGAGGTGAATGGGG+GGG + chr1_4:63533365-63533384 None:intergenic 50.0%
GTGTGTAAGAGGTGAATGGG+GGG + chr1_4:63533366-63533385 None:intergenic 50.0%
GGTGTGTAAGAGGTGAATGG+GGG + chr1_4:63533367-63533386 None:intergenic 50.0%
CCCGCTTTATGGTGTGTAAG+AGG + chr1_4:63533377-63533396 None:intergenic 50.0%
!! CATAAAGCGGGGAAGCACTT+GGG - chr1_4:63533386-63533405 Msa0176900:intron 50.0%
GTGTGGCAATGTGTGTTGTG+TGG + chr1_4:63533444-63533463 None:intergenic 50.0%
TGTGTGGCCCAGATATTGTG+TGG + chr1_4:63533461-63533480 None:intergenic 50.0%
TCTTTCACATAGCCGGTGTG+TGG - chr1_4:63533765-63533784 Msa0176900:intron 50.0%
CTTTCACATAGCCGGTGTGT+GGG - chr1_4:63533766-63533785 Msa0176900:intron 50.0%
AACCAACATGCCTGCTCTTG+TGG + chr1_4:63535408-63535427 None:intergenic 50.0%
CGGCTAGCAGTGAGATTTGA+AGG + chr1_4:63536262-63536281 None:intergenic 50.0%
TGCTAGCCGCAATCCAAGTT+TGG - chr1_4:63536273-63536292 Msa0176900:intron 50.0%
! GAGTGGTGACAGGATTAGCA+AGG + chr1_4:63536357-63536376 None:intergenic 50.0%
! GAGGGTATGTAGCACTGCAA+GGG + chr1_4:63536687-63536706 None:intergenic 50.0%
! AGAGGGTATGTAGCACTGCA+AGG + chr1_4:63536688-63536707 None:intergenic 50.0%
! GACCCTTTTGCCTAAAGAGG+TGG - chr1_4:63536822-63536841 Msa0176900:CDS 50.0%
! CTAAGGGCACAACCGGTTTC+CGG + chr1_4:63530986-63531005 None:intergenic 55.0%
AAACCGGTTGTGCCCTTAGG+TGG - chr1_4:63530987-63531006 Msa0176900:CDS 55.0%
!! TGCAACTCATAGTACCGGCG+TGG - chr1_4:63531043-63531062 Msa0176900:CDS 55.0%
!! AACTCATAGTACCGGCGTGG+CGG - chr1_4:63531046-63531065 Msa0176900:CDS 55.0%
TGAGGTTGCACCAAACCCAG+TGG + chr1_4:63531165-63531184 None:intergenic 55.0%
TGTAAGAGGTGAATGGGGGG+GGG + chr1_4:63533363-63533382 None:intergenic 55.0%
GTGTAAGAGGTGAATGGGGG+GGG + chr1_4:63533364-63533383 None:intergenic 55.0%
CCAAGTGCTTCCCCGCTTTA+TGG + chr1_4:63533388-63533407 None:intergenic 55.0%
!! CCATAAAGCGGGGAAGCACT+TGG - chr1_4:63533385-63533404 Msa0176900:intron 55.0%
ATGCCTGCTCTTGTGGCTGT+GGG + chr1_4:63535401-63535420 None:intergenic 55.0%
AGCCACAAGAGCAGGCATGT+TGG - chr1_4:63535403-63535422 Msa0176900:intron 55.0%
GCAGCAGCCTCAATTTGACC+AGG + chr1_4:63535878-63535897 None:intergenic 55.0%
CGATTCGAACATCACCGCAG+TGG - chr1_4:63535996-63536015 Msa0176900:intron 55.0%
CGGAAACCGGTTGTGCCCTT+AGG - chr1_4:63530984-63531003 Msa0176900:CDS 60.0%
AGACGGTTGGACCCACACAC+CGG + chr1_4:63533780-63533799 None:intergenic 60.0%
CATGCCTGCTCTTGTGGCTG+TGG + chr1_4:63535402-63535421 None:intergenic 60.0%
CGAACATCACCGCAGTGGCT+TGG - chr1_4:63536001-63536020 Msa0176900:intron 60.0%
ATCTGCGGTCCAAGCCACTG+CGG + chr1_4:63536013-63536032 None:intergenic 60.0%
TACCGGCGTGGCGGTTGAAC+TGG - chr1_4:63531055-63531074 Msa0176900:CDS 65.0%
GGCGGTTGAACTGGCGGAAG+AGG - chr1_4:63531064-63531083 Msa0176900:CDS 65.0%
AGAGGTGAATGGGGGGGGGA+GGG + chr1_4:63533359-63533378 None:intergenic 65.0%
AAGAGGTGAATGGGGGGGGG+AGG + chr1_4:63533360-63533379 None:intergenic 65.0%
CCTGCTCTTGTGGCTGTGGG+AGG + chr1_4:63535398-63535417 None:intergenic 65.0%
CCTCCCACAGCCACAAGAGC+AGG - chr1_4:63535395-63535414 Msa0176900:intron 65.0%
CGCCAGTTCAACCGCCACGC+CGG + chr1_4:63531060-63531079 None:intergenic 70.0%
CGGCGTGGCGGTTGAACTGG+CGG - chr1_4:63531058-63531077 Msa0176900:CDS 70.0%
GAGGTGAATGGGGGGGGGAG+GGG + chr1_4:63533358-63533377 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 63530491 63537245 63530491 ID=Msa0176900;Name=Msa0176900
chr1_4 mRNA 63530491 63537245 63530491 ID=Msa0176900-mRNA-1;Parent=Msa0176900;Name=Msa0176900-mRNA-1;_AED=0.00;_eAED=0.00;_QI=322|1|1|1|1|1|2|153|722
chr1_4 exon 63530491 63532393 63530491 ID=Msa0176900-mRNA-1:exon:20615;Parent=Msa0176900-mRNA-1
chr1_4 exon 63536505 63537245 63536505 ID=Msa0176900-mRNA-1:exon:20614;Parent=Msa0176900-mRNA-1
chr1_4 five_prime_UTR 63536924 63537245 63536924 ID=Msa0176900-mRNA-1:five_prime_utr;Parent=Msa0176900-mRNA-1
chr1_4 CDS 63536505 63536923 63536505 ID=Msa0176900-mRNA-1:cds;Parent=Msa0176900-mRNA-1
chr1_4 CDS 63530644 63532393 63530644 ID=Msa0176900-mRNA-1:cds;Parent=Msa0176900-mRNA-1
chr1_4 three_prime_UTR 63530491 63530643 63530491 ID=Msa0176900-mRNA-1:three_prime_utr;Parent=Msa0176900-mRNA-1
Gene Sequence

>Msa0176900

ATGGAGTTTTCAAATGGAGATAATAGCAATGGTTGTAACGGTTCTTCCATGAATCTTTGCAATGGTGGAACAAAAACCAGTAACAACAATGACCCTTTGAATTGGGGTATGGCTGCAGATTCTATGAAGGGTAGTCACCTAGATGAGGTGAAGCGTATGGTAGAGGAATACCGGAAACCGGTTGTGCCCTTAGGTGGAAAAGGTTTAACAATAGCACAAGTGGCTGCGGTTGCAACTCATAGTACCGGCGTGGCGGTTGAACTGGCGGAAGAGGCACGCTCCGCCGTTAAAGCTAGTAGTGATTGGGTGGTTGATAGTATGAATAAAGGGACTGATAGCTATGGAGTGACCACTGGGTTTGGTGCAACCTCACACAGAAGAACAAAACAAGGTGGTGCCCTTCAAAGTGAACTCATCAGATTTCTGAATGCTGGAATTTTCGGCAATGGAACAGAATCATCTCAGACATTACCTCCCACAGCCACAAGAGCAGGCATGTTGGTTAGAATCAACACATTGCTTCAAGGATATTCAGGAATCAGATTTGAAATCATGGAAGCAATAGCAAAATTTCTGAACCATAACATAACACCATGTCTTCCATTAAGAGGTACAATCACTGCATCAGGTGATTTAATTCCTTTAGCATATGTTGCTGGCCTTTTAATTGGAAGGCCAAATTCAAAATCTATTGGACCTAATGGACAAGTTCTGAATGCTAAAGAGGCTTTTCAACTAGCTGGAATTGAAACTGGTTTCTTTGAGTTGCAACCTAAAGAAGGTTTAGCACTAGTGAATGGTACTGCAGTTGGATCAGGTTTGGCTTCATTGGTTCTTTTTGATACAAATTTACTAGTTGTTCTCTCGGAACTTTTGTCTGCGATTTTCGCGGAAGTTATGCTAGGAAAACCTCAATTCACTGACCATTTGATTCATAAGTTGAAACTTCATCCTGGTCAAATTGAGGCTGCTGCTATTATGGAACATATTTTAGATGGAAGTTATTATCTTAAGGCTGCACAAAAAGTACATGAGATTAATCCACTTCAGAAGCCTAAACAAGATAGATACGCGATTCGAACATCACCGCAGTGGCTTGGACCGCAGATTGAAGTGATTCGACACGCAACAAAGATGATTGAGAGGGAGATAAATTCCGTGAATGACAATCCACTTATTGATGTTTCAAGGAATATGGCACTTCATGGAGGAAATTTCCAAGGTACACCGATTGGTGTATCGATGGATAACACTCGTTTAGCCATTGCTTCCATTGGTAAACTTATGTTTGCTCAATTCACTGAGCTTGTGAATGACATCTATAGCAACGGATTGCCTTCAAATCTCACTGCTAGCCGCAATCCAAGTTTGGATTACGGCTTCAAAGGAGCAGAAATTGCAATGGCATCCTATTGTTCAGAACTTCAATACCTTGCTAATCCTGTCACCACTCATGTTCAAAGTGCTGAACAACATAACCAAGATGTTAACTCTTTAGGCTTGATTTCAGCAAGAAAAACAGCTGAAGCAGTTGAAATATTGAAACTCATGTCATCCACCTTCTTAGTAGCATTGTGCCAAGCTATTGATCTAAGGCACATTGAGGAAAACTTGAAAAGTGTTGTCAAGAACACTGTGAGTCAAGTAGCCAAGAGAATTCTCACAGTTGGTGTCAATGGTGAGTTGCATCCATCAAGGTTTTGTGAGAAGGATTTACTCAATGTTGTTGAAGGTGAGTACGTTTTCGCTTACGTTGATGACCCTTGCAGTGCTACATACCCTCTAATGCAGAAGCTGAGACATGTACTAGTTGATCATGCATTGCAAAATGGTGATAAGGAGGCAAATTCAAGCACCTCCATTTTCCAAAAGATTGGAGCTTTTGAGGAAGAGCTTAAGACCCTTTTGCCTAAAGAGGTGGAAAATGCTAGGGTTCAAGTTGAAAATGGAAACCCTTCAGTTCCTAATATGATCAAGGAATGTAGATCATATCCATTGTACAAGTTCATAAGAGAAACTTTAGGGACAAGTTTGCTGACAGGTGAGAAAATTAGGTCACCTGGTGAGGAATGTGATAAGGTTTTCACAGCATTGTGTGATGGAAGGTTTATTGATCCCATGTTGGATTGTCTAAAGGAGTGGAATGGTGCTCCTCTACCTATTTGCTAG
Protein sequence

>Msa0176900

MEFSNGDNSNGCNGSSMNLCNGGTKTSNNNDPLNWGMAADSMKGSHLDEVKRMVEEYRKPVVPLGGKGLTIAQVAAVATHSTGVAVELAEEARSAVKASSDWVVDSMNKGTDSYGVTTGFGATSHRRTKQGGALQSELIRFLNAGIFGNGTESSQTLPPTATRAGMLVRINTLLQGYSGIRFEIMEAIAKFLNHNITPCLPLRGTITASGDLIPLAYVAGLLIGRPNSKSIGPNGQVLNAKEAFQLAGIETGFFELQPKEGLALVNGTAVGSGLASLVLFDTNLLVVLSELLSAIFAEVMLGKPQFTDHLIHKLKLHPGQIEAAAIMEHILDGSYYLKAAQKVHEINPLQKPKQDRYAIRTSPQWLGPQIEVIRHATKMIEREINSVNDNPLIDVSRNMALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFTELVNDIYSNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISARKTAEAVEILKLMSSTFLVALCQAIDLRHIEENLKSVVKNTVSQVAKRILTVGVNGELHPSRFCEKDLLNVVEGEYVFAYVDDPCSATYPLMQKLRHVLVDHALQNGDKEANSSTSIFQKIGAFEEELKTLLPKEVENARVQVENGNPSVPNMIKECRSYPLYKFIRETLGTSLLTGEKIRSPGEECDKVFTALCDGRFIDPMLDCLKEWNGAPLPIC*