AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0644270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0644270 MtrunA17_Chr4g0031411 95.252 337 12 2 1 336 1 334 0.0 585
Msa0644270 MtrunA17_Chr7g0237921 44.144 333 129 10 1 312 1 297 1.28e-61 200
Msa0644270 MtrunA17_Chr2g0328021 38.889 360 124 15 1 336 1 288 3.73e-57 187
Msa0644270 MtrunA17_Chr4g0010151 38.857 350 154 12 1 317 1 323 1.60e-55 185
Msa0644270 MtrunA17_Chr7g0223311 59.028 144 52 4 1 139 1 142 1.45e-46 161
Msa0644270 MtrunA17_Chr5g0411951 87.500 56 7 0 70 125 38 93 9.29e-33 124
Msa0644270 MtrunA17_Chr3g0117601 54.867 113 44 3 48 160 37 142 1.32e-32 124
Msa0644270 MtrunA17_Chr4g0047001 66.667 81 23 1 76 156 56 132 4.71e-32 123
Msa0644270 MtrunA17_Chr2g0326001 80.328 61 12 0 69 129 34 94 1.31e-31 120
Msa0644270 MtrunA17_Chr8g0374251 60.674 89 26 1 75 163 68 147 1.51e-31 121
Msa0644270 MtrunA17_Chr4g0030051 80.645 62 11 1 67 127 32 93 3.23e-31 119
Msa0644270 MtrunA17_Chr8g0367161 69.620 79 20 2 74 152 31 105 8.54e-31 119
Msa0644270 MtrunA17_Chr8g0346551 57.732 97 39 1 62 158 11 105 9.61e-31 117
Msa0644270 MtrunA17_Chr8g0374111 54.717 106 32 3 54 159 17 106 6.70e-30 114
Msa0644270 MtrunA17_Chr3g0127201 66.216 74 21 1 56 129 12 81 7.11e-30 115
Msa0644270 MtrunA17_Chr1g0188851 60.000 80 30 1 52 129 18 97 2.86e-29 114
Msa0644270 MtrunA17_Chr3g0126201 63.514 74 27 0 56 129 32 105 7.81e-29 113
Msa0644270 MtrunA17_Chr8g0341671 58.750 80 30 1 59 135 1 80 1.07e-28 110
Msa0644270 MtrunA17_Chr2g0282441 67.606 71 22 1 57 126 6 76 1.76e-28 112
Msa0644270 MtrunA17_Chr4g0061761 82.692 52 9 0 74 125 39 90 2.64e-28 112
Msa0644270 MtrunA17_Chr2g0282511 88.000 50 6 0 74 123 44 93 3.86e-28 111
Msa0644270 MtrunA17_Chr1g0177251 63.636 77 27 1 77 153 14 89 4.88e-28 110
Msa0644270 MtrunA17_Chr2g0308011 84.000 50 8 0 74 123 36 85 5.65e-27 105
Msa0644270 MtrunA17_Chr4g0047761 71.186 59 15 1 75 133 72 128 1.11e-24 102
Msa0644270 MtrunA17_Chr2g0282051 66.129 62 16 1 74 135 45 101 1.61e-24 100
Msa0644270 MtrunA17_Chr8g0355261 66.102 59 20 0 71 129 114 172 2.23e-24 102
Msa0644270 MtrunA17_Chr2g0283811 63.380 71 25 1 72 142 44 113 2.74e-24 97.1
Msa0644270 MtrunA17_Chr6g0460721 63.333 60 22 0 68 127 82 141 5.65e-24 100
Msa0644270 MtrunA17_Chr6g0453321 66.667 60 20 0 68 127 129 188 8.12e-24 101
Msa0644270 MtrunA17_Chr4g0042481 58.571 70 26 1 58 127 108 174 1.41e-23 100
Msa0644270 MtrunA17_Chr7g0217581 49.412 85 43 0 68 152 225 309 1.49e-23 101
Msa0644270 MtrunA17_Chr7g0254161 60.000 70 25 2 60 129 88 154 1.64e-23 100
Msa0644270 MtrunA17_Chr3g0092111 62.687 67 24 1 68 134 129 194 2.46e-23 100
Msa0644270 MtrunA17_Chr6g0460731 61.667 60 23 0 68 127 89 148 3.79e-23 98.6
Msa0644270 MtrunA17_Chr5g0417571 43.820 89 50 0 39 127 102 190 1.02e-21 94.0
Msa0644270 MtrunA17_Chr5g0417601 69.091 55 16 1 77 131 142 195 1.19e-20 91.7
Msa0644270 MtrunA17_Chr5g0417551 48.780 82 41 1 59 140 111 191 4.83e-20 89.7
Msa0644270 MtrunA17_Chr5g0417561 50.725 69 34 0 59 127 103 171 9.55e-20 89.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0644270 AT3G55370.1 38.527 353 138 13 1 324 1 303 1.40e-51 174
Msa0644270 AT3G55370.2 42.164 268 104 8 1 251 1 234 2.41e-51 174
Msa0644270 AT3G55370.3 39.809 314 118 11 32 324 85 348 7.53e-49 168
Msa0644270 AT1G07640.1 42.308 286 145 10 57 335 3 275 1.39e-48 164
Msa0644270 AT1G07640.2 42.105 285 147 9 57 335 59 331 5.86e-48 164
Msa0644270 AT1G07640.3 42.105 285 147 9 57 335 67 339 9.70e-48 164
Msa0644270 AT2G37590.1 53.846 156 32 2 1 129 1 143 8.72e-47 161
Msa0644270 AT2G28810.1 36.685 368 160 15 1 332 1 331 1.21e-45 159
Msa0644270 AT5G02460.1 88.158 76 9 0 54 129 74 149 5.04e-44 156
Msa0644270 AT2G28810.2 38.776 294 125 11 57 332 58 314 2.14e-42 150
Msa0644270 AT5G60200.1 76.389 72 13 1 70 141 50 117 1.78e-34 127
Msa0644270 AT1G51700.1 58.889 90 29 1 70 159 28 109 1.18e-31 118
Msa0644270 AT5G60850.1 62.791 86 25 2 74 159 50 128 2.45e-31 120
Msa0644270 AT3G45610.1 53.409 88 39 1 70 155 35 122 2.99e-31 118
Msa0644270 AT4G38000.1 77.049 61 14 0 69 129 35 95 2.29e-30 116
Msa0644270 AT5G65590.1 81.034 58 11 0 75 132 41 98 4.77e-30 117
Msa0644270 AT3G21270.1 53.000 100 28 2 75 155 29 128 3.61e-29 111
Msa0644270 AT4G24060.1 50.000 112 56 0 69 180 47 158 1.92e-28 113
Msa0644270 AT1G28310.1 79.661 59 11 1 75 133 27 84 3.57e-28 111
Msa0644270 AT3G52440.1 70.588 68 16 1 77 144 27 90 4.20e-28 110
Msa0644270 AT3G52440.2 70.588 68 16 1 77 144 46 109 4.96e-28 110
Msa0644270 AT2G28510.1 73.846 65 13 1 74 138 47 107 5.38e-28 110
Msa0644270 AT1G28310.2 79.661 59 11 1 75 133 51 108 5.91e-28 111
Msa0644270 AT5G62940.1 77.193 57 13 0 69 125 67 123 7.54e-28 112
Msa0644270 AT3G61850.2 58.889 90 29 2 71 156 58 143 2.39e-27 108
Msa0644270 AT3G61850.3 58.889 90 29 2 71 156 58 143 2.39e-27 108
Msa0644270 AT5G66940.1 65.714 70 21 1 75 144 32 98 2.52e-27 107
Msa0644270 AT3G61850.1 58.889 90 29 2 71 156 70 155 2.83e-27 108
Msa0644270 AT3G61850.5 58.889 90 29 2 71 156 58 143 3.13e-27 109
Msa0644270 AT1G21340.1 71.875 64 12 1 74 137 37 94 3.35e-27 108
Msa0644270 AT3G61850.4 58.889 90 29 2 71 156 70 155 3.86e-27 109
Msa0644270 AT4G21050.1 47.581 124 50 3 68 190 17 126 4.61e-27 106
Msa0644270 AT3G50410.1 70.690 58 17 0 75 132 30 87 1.47e-26 106
Msa0644270 AT2G46590.1 56.250 80 35 0 43 122 36 115 2.86e-26 107
Msa0644270 AT2G46590.2 56.250 80 35 0 43 122 48 127 3.42e-26 107
Msa0644270 AT4G00940.1 63.514 74 23 2 59 129 50 122 1.17e-25 104
Msa0644270 AT4G00940.3 63.514 74 23 2 59 129 50 122 1.17e-25 104
Msa0644270 AT4G00940.2 63.514 74 23 2 59 129 50 122 1.17e-25 104
Msa0644270 AT1G64620.1 66.176 68 23 0 56 123 30 97 4.12e-25 104
Msa0644270 AT1G47655.1 70.000 60 16 1 66 123 18 77 2.00e-24 99.4
Msa0644270 AT2G34140.1 58.442 77 28 2 53 129 39 111 3.77e-24 97.4
Msa0644270 AT1G29160.1 69.492 59 17 1 71 129 58 115 1.24e-23 96.3
Msa0644270 AT4G21040.1 56.250 80 30 1 77 156 27 101 3.43e-23 96.7
Msa0644270 AT5G39660.3 66.667 63 20 1 67 129 130 191 3.52e-23 100
Msa0644270 AT5G39660.1 66.667 63 20 1 67 129 130 191 3.52e-23 100
Msa0644270 AT5G39660.2 66.667 63 20 1 67 129 130 191 3.52e-23 100
Msa0644270 AT1G26790.1 54.412 68 31 0 60 127 96 163 4.15e-23 99.0
Msa0644270 AT5G62430.1 56.000 75 31 2 58 131 36 109 4.38e-23 97.8
Msa0644270 AT3G47500.1 65.000 60 21 0 68 127 103 162 8.21e-23 99.0
Msa0644270 AT1G69570.1 61.667 60 23 0 68 127 125 184 2.08e-22 97.4
Msa0644270 AT4G21080.1 63.492 63 18 1 77 139 27 84 7.64e-22 93.2
Msa0644270 AT4G21030.1 54.098 61 25 1 68 128 17 74 1.86e-15 74.3

Find 97 sgRNAs with CRISPR-Local

Find 227 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACTCATCTCTTATAAATT+TGG 0.183593 4_3:+47993776 Msa0644270:exon
GCAAGACATGTAGGCGTTAT+TGG 0.207030 4_3:+47993086 Msa0644270:CDS
AGTAATTTATGTACTATATA+TGG 0.208661 4_3:+47993959 Msa0644270:three_prime_UTR
GTTGTTGTTGATGTTGTTCT+TGG 0.217968 4_3:-47993378 None:intergenic
TCAAGAGCCACCGGTTAAAA+TGG 0.246428 4_3:+47993651 Msa0644270:CDS
TCTTGAGAGTTTGTTGAATT+AGG 0.247926 4_3:-47993196 None:intergenic
CCATTTGCTTGTTGATGATT+TGG 0.249048 4_3:-47992839 None:intergenic
ACCAACAACAATACTATTCT+TGG 0.250684 4_3:+47993731 Msa0644270:CDS
GTTTCTGCTTCTGCTGTTGC+TGG 0.257390 4_3:+47993463 Msa0644270:CDS
GATCATATGGGGTTTCAAAT+TGG 0.271163 4_3:+47993409 Msa0644270:CDS
TATTCTTGGAATGATTTATC+AGG 0.272738 4_3:+47993745 Msa0644270:CDS
TACTGGTGGCGGTGGTACTA+TGG 0.292815 4_3:+47992913 Msa0644270:CDS
TTTACCTGGTGGTGCCAATT+AGG 0.304320 4_3:-47992637 None:intergenic
CCTTCTCATCATGAACTAAT+TGG 0.327970 4_3:+47993247 Msa0644270:CDS
TTCATATCTTTGATCCATTC+CGG 0.333436 4_3:-47993799 None:intergenic
GTTATGTAGATCCTCCTAAT+TGG 0.350822 4_3:+47992623 Msa0644270:CDS
AACATTGAAGCTGCAGCATC+TGG 0.352153 4_3:+47993592 Msa0644270:CDS
AATTCCTAACCTACCCTTCA+TGG 0.365060 4_3:+47993288 Msa0644270:CDS
ACAACAACAACAAGATCATA+TGG 0.370266 4_3:+47993396 Msa0644270:CDS
TCTGCTGTTGCTGGAGGTGT+TGG 0.398368 4_3:+47993472 Msa0644270:CDS
TTTCAAATTGGTATTGGTAA+TGG 0.399190 4_3:+47993421 Msa0644270:CDS
TCCAAGAATAGTATTGTTGT+TGG 0.406762 4_3:-47993732 None:intergenic
ATGGGGTTTCAAATTGGTAT+TGG 0.408013 4_3:+47993415 Msa0644270:CDS
GTAATTTATGTACTATATAT+GGG 0.411722 4_3:+47993960 Msa0644270:three_prime_UTR
CTACGACACCCTCCACCAAC+TGG 0.417773 4_3:-47993136 None:intergenic
GGACACTTTAGCGCTGGTTC+TGG 0.424523 4_3:-47992992 None:intergenic
TGAGAAGGGATTGCACTTGA+TGG 0.431346 4_3:-47993232 None:intergenic
CTGACGTTGTAATATCAATT+CGG 0.439770 4_3:+47994058 Msa0644270:three_prime_UTR
GCTCGATCAGCCATGGAGCC+TGG 0.444337 4_3:-47992947 None:intergenic
CCTCAAGTGGGAGGTAGTAC+TGG 0.448394 4_3:+47992896 Msa0644270:CDS
CCAAATCATCAACAAGCAAA+TGG 0.450966 4_3:+47992839 Msa0644270:CDS
GCTGCAGCATCTGGATTTGT+TGG 0.454209 4_3:+47993601 Msa0644270:CDS
GATATGAAGTTTCGAACGAT+TGG 0.454492 4_3:+47993814 Msa0644270:three_prime_UTR
AAACAAAATCAATTACTAGA+AGG 0.455741 4_3:-47993912 None:intergenic
TCTTATAAATTTGGCCGGAA+TGG 0.459361 4_3:+47993785 Msa0644270:exon
GATTCAAAAGTATTCAAGAA+AGG 0.460724 4_3:-47993526 None:intergenic
CTTAGAAATGTTCCAGTTGG+TGG 0.472325 4_3:+47993124 Msa0644270:CDS
CAACAACAACAAGATCATAT+GGG 0.473282 4_3:+47993397 Msa0644270:CDS
CTCGATCAGACCAGGCTCCA+TGG 0.475078 4_3:+47992937 Msa0644270:CDS
GAGATATAGCTTCAAACTCT+AGG 0.480948 4_3:+47993623 Msa0644270:CDS
CCTCCCACTTGAGGTGGTAA+AGG 0.483237 4_3:-47992887 None:intergenic
TTTAGCGCTGGTTCTGGTGG+TGG 0.483860 4_3:-47992986 None:intergenic
GGTAGGTTAGGAATTGTTTG+TGG 0.484498 4_3:-47993280 None:intergenic
GAGGCCATGAAGGGTAGGTT+AGG 0.490552 4_3:-47993292 None:intergenic
AGAAATGTTCCAGTTGGTGG+AGG 0.497986 4_3:+47993127 Msa0644270:CDS
CCAATTAGTTCATGATGAGA+AGG 0.516486 4_3:-47993247 None:intergenic
CACTTTAGCGCTGGTTCTGG+TGG 0.522746 4_3:-47992989 None:intergenic
GAAGTAGCAAAATTTAGTGT+TGG 0.523027 4_3:-47993029 None:intergenic
TCCTCCTAATTGGCACCACC+AGG 0.528426 4_3:+47992633 Msa0644270:CDS
ACTGGTGGCGGTGGTACTAT+GGG 0.530847 4_3:+47992914 Msa0644270:CDS
GGAAACGTTAACATGGGACT+TGG 0.531022 4_3:+47993343 Msa0644270:CDS
GAGAAGGGATTGCACTTGAT+GGG 0.532889 4_3:-47993231 None:intergenic
TCATCTCTTATAAATTTGGC+CGG 0.539379 4_3:+47993780 Msa0644270:exon
AATCTATCAAGAACATCCCT+TGG 0.539894 4_3:+47993691 Msa0644270:CDS
CAACGAGGACACTTTAGCGC+TGG 0.540252 4_3:-47992998 None:intergenic
ACCTGGTGGTGCCAATTAGG+AGG 0.541280 4_3:-47992634 None:intergenic
TCTGCTTCTGCTGTTGCTGG+AGG 0.548891 4_3:+47993466 Msa0644270:CDS
AGATATAGCTTCAAACTCTA+GGG 0.556521 4_3:+47993624 Msa0644270:CDS
GGAGGTAGTACTGGTGGCGG+TGG 0.560481 4_3:+47992905 Msa0644270:CDS
ATTCTGCATCGAGGCCATGA+AGG 0.561082 4_3:-47993302 None:intergenic
AATCTGAGTCGTTATGTCGT+TGG 0.570962 4_3:+47993322 Msa0644270:CDS
CAATTAGTTCATGATGAGAA+GGG 0.573984 4_3:-47993246 None:intergenic
TGTCGTTGGAAACGTTAACA+TGG 0.575317 4_3:+47993336 Msa0644270:CDS
TCCACCTTTACCACCTCAAG+TGG 0.577272 4_3:+47992883 Msa0644270:CDS
ACTATGGGCTCGATCAGACC+AGG 0.580839 4_3:+47992929 Msa0644270:CDS
TTCTGCATCGAGGCCATGAA+GGG 0.581643 4_3:-47993301 None:intergenic
CCCACTTGAGGTGGTAAAGG+TGG 0.581750 4_3:-47992884 None:intergenic
GAAATGTTCCAGTTGGTGGA+GGG 0.594932 4_3:+47993128 Msa0644270:CDS
GCACTTAGAAATGTTCCAGT+TGG 0.600640 4_3:+47993121 Msa0644270:CDS
TATATTATTCAACTCAGTCA+TGG 0.602165 4_3:+47993862 Msa0644270:three_prime_UTR
AGAAGGGATTGCACTTGATG+GGG 0.604506 4_3:-47993230 None:intergenic
GTAGGCGTTATTGGACAAGA+GGG 0.605161 4_3:+47993095 Msa0644270:CDS
TAGGGCTAATCAAGAGCCAC+CGG 0.605644 4_3:+47993642 Msa0644270:CDS
GTCGTTGGAAACGTTAACAT+GGG 0.609381 4_3:+47993337 Msa0644270:CDS
GTCACTTCTGCAAGACATGT+AGG 0.611130 4_3:+47993077 Msa0644270:CDS
TGTAGGCGTTATTGGACAAG+AGG 0.616737 4_3:+47993094 Msa0644270:CDS
GCATCGAGGCCATGAAGGGT+AGG 0.623817 4_3:-47993297 None:intergenic
AATTGCTGCAAATTACGCCA+TGG 0.629104 4_3:-47993502 None:intergenic
TAAACGAGCTCGATCAGCCA+TGG 0.633447 4_3:-47992954 None:intergenic
CATGTCTTGCAGAAGTGACG+AGG 0.635723 4_3:-47993073 None:intergenic
GTGGGAGGTAGTACTGGTGG+CGG 0.638124 4_3:+47992902 Msa0644270:CDS
AACAACAACAAGATCATATG+GGG 0.646211 4_3:+47993398 Msa0644270:CDS
TATTATGTTCAGAGACACCA+AGG 0.647047 4_3:-47993708 None:intergenic
CCACCTTTACCACCTCAAGT+GGG 0.662217 4_3:+47992884 Msa0644270:CDS
CAAGTGGGAGGTAGTACTGG+TGG 0.664836 4_3:+47992899 Msa0644270:CDS
GTACTACCTCCCACTTGAGG+TGG 0.666584 4_3:-47992893 None:intergenic
TAGGCGTTATTGGACAAGAG+GGG 0.675252 4_3:+47993096 Msa0644270:CDS
AGGCGTTATTGGACAAGAGG+GGG 0.675862 4_3:+47993097 Msa0644270:CDS
CCAGTACTACCTCCCACTTG+AGG 0.681370 4_3:-47992896 None:intergenic
CCTTTACCACCTCAAGTGGG+AGG 0.700568 4_3:+47992887 Msa0644270:CDS
GAGGTGTTGGAGTTGAACCA+TGG 0.701694 4_3:+47993485 Msa0644270:CDS
TGAGTTGAATAATATATGAG+TGG 0.703462 4_3:-47993855 None:intergenic
TTGAATAGAAGAGAAAACCA+TGG 0.707467 4_3:-47992599 None:intergenic
ATTATGTTCAGAGACACCAA+GGG 0.718424 4_3:-47993707 None:intergenic
AGAAGTGACGAGGTTGAGTG+AGG 0.724186 4_3:-47993063 None:intergenic
GTGTTGGTTGAATCGCAACG+AGG 0.733913 4_3:-47993013 None:intergenic
ACGACTCAGATTCTGCATCG+AGG 0.741695 4_3:-47993311 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTAAAAAATTATTGTGA+TGG - chr4_3:47992776-47992795 None:intergenic 10.0%
!!! ATTTTAAAAAATTATTGTGA+TGG - chr4_3:47992776-47992795 None:intergenic 10.0%
!! ATGGAAAGAAATTAAAAAAA+GGG - chr4_3:47992800-47992819 None:intergenic 15.0%
!!! GTTTATGTTTTTTTATTTCA+TGG + chr4_3:47993931-47993950 Msa0644270:three_prime_UTR 15.0%
!! AGTAATTTATGTACTATATA+TGG + chr4_3:47993959-47993978 Msa0644270:three_prime_UTR 15.0%
!! GTAATTTATGTACTATATAT+GGG + chr4_3:47993960-47993979 Msa0644270:three_prime_UTR 15.0%
!! ATGGAAAGAAATTAAAAAAA+GGG - chr4_3:47992800-47992819 None:intergenic 15.0%
!!! GTTTATGTTTTTTTATTTCA+TGG + chr4_3:47993931-47993950 Msa0644270:three_prime_UTR 15.0%
!! AGTAATTTATGTACTATATA+TGG + chr4_3:47993959-47993978 Msa0644270:three_prime_UTR 15.0%
!! GTAATTTATGTACTATATAT+GGG + chr4_3:47993960-47993979 Msa0644270:three_prime_UTR 15.0%
!! ATGAAAATTAAAACTTTACC+TGG - chr4_3:47992654-47992673 None:intergenic 20.0%
!!! TTCACTTTCTTTTTTGAATT+TGG - chr4_3:47992683-47992702 None:intergenic 20.0%
!! GATGGAAAGAAATTAAAAAA+AGG - chr4_3:47992801-47992820 None:intergenic 20.0%
!!! AATAATTCATACACTTTTCA+TGG + chr4_3:47993562-47993581 Msa0644270:CDS 20.0%
!! AAACAAAATCAATTACTAGA+AGG - chr4_3:47993915-47993934 None:intergenic 20.0%
!! ATGAAAATTAAAACTTTACC+TGG - chr4_3:47992654-47992673 None:intergenic 20.0%
!!! TTCACTTTCTTTTTTGAATT+TGG - chr4_3:47992683-47992702 None:intergenic 20.0%
!! GATGGAAAGAAATTAAAAAA+AGG - chr4_3:47992801-47992820 None:intergenic 20.0%
!!! AATAATTCATACACTTTTCA+TGG + chr4_3:47993562-47993581 Msa0644270:CDS 20.0%
!! AAACAAAATCAATTACTAGA+AGG - chr4_3:47993915-47993934 None:intergenic 20.0%
! AAAATTAAAACTTTACCTGG+TGG - chr4_3:47992651-47992670 None:intergenic 25.0%
! ATATTCAAGAAGATGAAGTA+AGG - chr4_3:47992740-47992759 None:intergenic 25.0%
!! TTGAATTAGGAGATTTTGAA+CGG - chr4_3:47993186-47993205 None:intergenic 25.0%
!!! TTTCAAATTGGTATTGGTAA+TGG + chr4_3:47993421-47993440 Msa0644270:CDS 25.0%
!!! GATTCAAAAGTATTCAAGAA+AGG - chr4_3:47993529-47993548 None:intergenic 25.0%
! TATTCTTGGAATGATTTATC+AGG + chr4_3:47993745-47993764 Msa0644270:CDS 25.0%
! CTACTCATCTCTTATAAATT+TGG + chr4_3:47993776-47993795 Msa0644270:exon 25.0%
!! TGAGTTGAATAATATATGAG+TGG - chr4_3:47993858-47993877 None:intergenic 25.0%
! TATATTATTCAACTCAGTCA+TGG + chr4_3:47993862-47993881 Msa0644270:three_prime_UTR 25.0%
! AAAATTAAAACTTTACCTGG+TGG - chr4_3:47992651-47992670 None:intergenic 25.0%
! ATATTCAAGAAGATGAAGTA+AGG - chr4_3:47992740-47992759 None:intergenic 25.0%
!! TTGAATTAGGAGATTTTGAA+CGG - chr4_3:47993186-47993205 None:intergenic 25.0%
!!! TTTCAAATTGGTATTGGTAA+TGG + chr4_3:47993421-47993440 Msa0644270:CDS 25.0%
!!! GATTCAAAAGTATTCAAGAA+AGG - chr4_3:47993529-47993548 None:intergenic 25.0%
! TATTCTTGGAATGATTTATC+AGG + chr4_3:47993745-47993764 Msa0644270:CDS 25.0%
! CTACTCATCTCTTATAAATT+TGG + chr4_3:47993776-47993795 Msa0644270:exon 25.0%
!! TGAGTTGAATAATATATGAG+TGG - chr4_3:47993858-47993877 None:intergenic 25.0%
! TATATTATTCAACTCAGTCA+TGG + chr4_3:47993862-47993881 Msa0644270:three_prime_UTR 25.0%
TTGAATAGAAGAGAAAACCA+TGG - chr4_3:47992602-47992621 None:intergenic 30.0%
! ATGGTTTTCTCTTCTATTCA+AGG + chr4_3:47992601-47992620 Msa0644270:CDS 30.0%
GAAGTAGCAAAATTTAGTGT+TGG - chr4_3:47993032-47993051 None:intergenic 30.0%
!! TCTTGAGAGTTTGTTGAATT+AGG - chr4_3:47993199-47993218 None:intergenic 30.0%
CAATTAGTTCATGATGAGAA+GGG - chr4_3:47993249-47993268 None:intergenic 30.0%
ACAACAACAACAAGATCATA+TGG + chr4_3:47993396-47993415 Msa0644270:CDS 30.0%
CAACAACAACAAGATCATAT+GGG + chr4_3:47993397-47993416 Msa0644270:CDS 30.0%
AACAACAACAAGATCATATG+GGG + chr4_3:47993398-47993417 Msa0644270:CDS 30.0%
AGATATAGCTTCAAACTCTA+GGG + chr4_3:47993624-47993643 Msa0644270:CDS 30.0%
!! CGATTTTCTTCCATTTTAAC+CGG - chr4_3:47993664-47993683 None:intergenic 30.0%
ACCAACAACAATACTATTCT+TGG + chr4_3:47993731-47993750 Msa0644270:CDS 30.0%
TCCAAGAATAGTATTGTTGT+TGG - chr4_3:47993735-47993754 None:intergenic 30.0%
TCATCTCTTATAAATTTGGC+CGG + chr4_3:47993780-47993799 Msa0644270:exon 30.0%
TTCATATCTTTGATCCATTC+CGG - chr4_3:47993802-47993821 None:intergenic 30.0%
CTGACGTTGTAATATCAATT+CGG + chr4_3:47994058-47994077 Msa0644270:three_prime_UTR 30.0%
TTGAATAGAAGAGAAAACCA+TGG - chr4_3:47992602-47992621 None:intergenic 30.0%
! ATGGTTTTCTCTTCTATTCA+AGG + chr4_3:47992601-47992620 Msa0644270:CDS 30.0%
GAAGTAGCAAAATTTAGTGT+TGG - chr4_3:47993032-47993051 None:intergenic 30.0%
!! TCTTGAGAGTTTGTTGAATT+AGG - chr4_3:47993199-47993218 None:intergenic 30.0%
CAATTAGTTCATGATGAGAA+GGG - chr4_3:47993249-47993268 None:intergenic 30.0%
ACAACAACAACAAGATCATA+TGG + chr4_3:47993396-47993415 Msa0644270:CDS 30.0%
CAACAACAACAAGATCATAT+GGG + chr4_3:47993397-47993416 Msa0644270:CDS 30.0%
AACAACAACAAGATCATATG+GGG + chr4_3:47993398-47993417 Msa0644270:CDS 30.0%
AGATATAGCTTCAAACTCTA+GGG + chr4_3:47993624-47993643 Msa0644270:CDS 30.0%
!! CGATTTTCTTCCATTTTAAC+CGG - chr4_3:47993664-47993683 None:intergenic 30.0%
ACCAACAACAATACTATTCT+TGG + chr4_3:47993731-47993750 Msa0644270:CDS 30.0%
TCCAAGAATAGTATTGTTGT+TGG - chr4_3:47993735-47993754 None:intergenic 30.0%
TCATCTCTTATAAATTTGGC+CGG + chr4_3:47993780-47993799 Msa0644270:exon 30.0%
TTCATATCTTTGATCCATTC+CGG - chr4_3:47993802-47993821 None:intergenic 30.0%
CTGACGTTGTAATATCAATT+CGG + chr4_3:47994058-47994077 Msa0644270:three_prime_UTR 30.0%
GTTATGTAGATCCTCCTAAT+TGG + chr4_3:47992623-47992642 Msa0644270:CDS 35.0%
TTGCTGCAGGTTAAAATAGA+TGG - chr4_3:47992819-47992838 None:intergenic 35.0%
!! CCATTTGCTTGTTGATGATT+TGG - chr4_3:47992842-47992861 None:intergenic 35.0%
CCAAATCATCAACAAGCAAA+TGG + chr4_3:47992839-47992858 Msa0644270:CDS 35.0%
CCAATTAGTTCATGATGAGA+AGG - chr4_3:47993250-47993269 None:intergenic 35.0%
CCTTCTCATCATGAACTAAT+TGG + chr4_3:47993247-47993266 Msa0644270:CDS 35.0%
! GTTGTTGTTGATGTTGTTCT+TGG - chr4_3:47993381-47993400 None:intergenic 35.0%
GATCATATGGGGTTTCAAAT+TGG + chr4_3:47993409-47993428 Msa0644270:CDS 35.0%
ATGGGGTTTCAAATTGGTAT+TGG + chr4_3:47993415-47993434 Msa0644270:CDS 35.0%
! ACTTTTGAATCAAACTCTGC+TGG + chr4_3:47993538-47993557 Msa0644270:CDS 35.0%
GAGATATAGCTTCAAACTCT+AGG + chr4_3:47993623-47993642 Msa0644270:CDS 35.0%
!! TTTTCTTCCATTTTAACCGG+TGG - chr4_3:47993661-47993680 None:intergenic 35.0%
AATCTATCAAGAACATCCCT+TGG + chr4_3:47993691-47993710 Msa0644270:CDS 35.0%
ATTATGTTCAGAGACACCAA+GGG - chr4_3:47993710-47993729 None:intergenic 35.0%
TATTATGTTCAGAGACACCA+AGG - chr4_3:47993711-47993730 None:intergenic 35.0%
TCTTATAAATTTGGCCGGAA+TGG + chr4_3:47993785-47993804 Msa0644270:exon 35.0%
GATATGAAGTTTCGAACGAT+TGG + chr4_3:47993814-47993833 Msa0644270:three_prime_UTR 35.0%
! GAGAAAACCATGGTATTGAA+AGG - chr4_3:47992592-47992611 None:intergenic 35.0%
GTTATGTAGATCCTCCTAAT+TGG + chr4_3:47992623-47992642 Msa0644270:CDS 35.0%
TTGCTGCAGGTTAAAATAGA+TGG - chr4_3:47992819-47992838 None:intergenic 35.0%
!! CCATTTGCTTGTTGATGATT+TGG - chr4_3:47992842-47992861 None:intergenic 35.0%
CCAAATCATCAACAAGCAAA+TGG + chr4_3:47992839-47992858 Msa0644270:CDS 35.0%
CCAATTAGTTCATGATGAGA+AGG - chr4_3:47993250-47993269 None:intergenic 35.0%
CCTTCTCATCATGAACTAAT+TGG + chr4_3:47993247-47993266 Msa0644270:CDS 35.0%
! GTTGTTGTTGATGTTGTTCT+TGG - chr4_3:47993381-47993400 None:intergenic 35.0%
GATCATATGGGGTTTCAAAT+TGG + chr4_3:47993409-47993428 Msa0644270:CDS 35.0%
ATGGGGTTTCAAATTGGTAT+TGG + chr4_3:47993415-47993434 Msa0644270:CDS 35.0%
! ACTTTTGAATCAAACTCTGC+TGG + chr4_3:47993538-47993557 Msa0644270:CDS 35.0%
GAGATATAGCTTCAAACTCT+AGG + chr4_3:47993623-47993642 Msa0644270:CDS 35.0%
!! TTTTCTTCCATTTTAACCGG+TGG - chr4_3:47993661-47993680 None:intergenic 35.0%
AATCTATCAAGAACATCCCT+TGG + chr4_3:47993691-47993710 Msa0644270:CDS 35.0%
ATTATGTTCAGAGACACCAA+GGG - chr4_3:47993710-47993729 None:intergenic 35.0%
TATTATGTTCAGAGACACCA+AGG - chr4_3:47993711-47993730 None:intergenic 35.0%
TCTTATAAATTTGGCCGGAA+TGG + chr4_3:47993785-47993804 Msa0644270:exon 35.0%
GATATGAAGTTTCGAACGAT+TGG + chr4_3:47993814-47993833 Msa0644270:three_prime_UTR 35.0%
GCACTTAGAAATGTTCCAGT+TGG + chr4_3:47993121-47993140 Msa0644270:CDS 40.0%
CTTAGAAATGTTCCAGTTGG+TGG + chr4_3:47993124-47993143 Msa0644270:CDS 40.0%
GGTAGGTTAGGAATTGTTTG+TGG - chr4_3:47993283-47993302 None:intergenic 40.0%
AATTCCTAACCTACCCTTCA+TGG + chr4_3:47993288-47993307 Msa0644270:CDS 40.0%
AATCTGAGTCGTTATGTCGT+TGG + chr4_3:47993322-47993341 Msa0644270:CDS 40.0%
TGTCGTTGGAAACGTTAACA+TGG + chr4_3:47993336-47993355 Msa0644270:CDS 40.0%
GTCGTTGGAAACGTTAACAT+GGG + chr4_3:47993337-47993356 Msa0644270:CDS 40.0%
AATTGCTGCAAATTACGCCA+TGG - chr4_3:47993505-47993524 None:intergenic 40.0%
GCACTTAGAAATGTTCCAGT+TGG + chr4_3:47993121-47993140 Msa0644270:CDS 40.0%
CTTAGAAATGTTCCAGTTGG+TGG + chr4_3:47993124-47993143 Msa0644270:CDS 40.0%
GGTAGGTTAGGAATTGTTTG+TGG - chr4_3:47993283-47993302 None:intergenic 40.0%
AATTCCTAACCTACCCTTCA+TGG + chr4_3:47993288-47993307 Msa0644270:CDS 40.0%
AATCTGAGTCGTTATGTCGT+TGG + chr4_3:47993322-47993341 Msa0644270:CDS 40.0%
TGTCGTTGGAAACGTTAACA+TGG + chr4_3:47993336-47993355 Msa0644270:CDS 40.0%
GTCGTTGGAAACGTTAACAT+GGG + chr4_3:47993337-47993356 Msa0644270:CDS 40.0%
AATTGCTGCAAATTACGCCA+TGG - chr4_3:47993505-47993524 None:intergenic 40.0%
! TTTACCTGGTGGTGCCAATT+AGG - chr4_3:47992640-47992659 None:intergenic 45.0%
!! GTTGATGATTTGGTTGCTGC+AGG - chr4_3:47992832-47992851 None:intergenic 45.0%
GTCACTTCTGCAAGACATGT+AGG + chr4_3:47993077-47993096 Msa0644270:CDS 45.0%
GCAAGACATGTAGGCGTTAT+TGG + chr4_3:47993086-47993105 Msa0644270:CDS 45.0%
TGTAGGCGTTATTGGACAAG+AGG + chr4_3:47993094-47993113 Msa0644270:CDS 45.0%
GTAGGCGTTATTGGACAAGA+GGG + chr4_3:47993095-47993114 Msa0644270:CDS 45.0%
TAGGCGTTATTGGACAAGAG+GGG + chr4_3:47993096-47993115 Msa0644270:CDS 45.0%
!! AGAAATGTTCCAGTTGGTGG+AGG + chr4_3:47993127-47993146 Msa0644270:CDS 45.0%
!! GAAATGTTCCAGTTGGTGGA+GGG + chr4_3:47993128-47993147 Msa0644270:CDS 45.0%
AGAAGGGATTGCACTTGATG+GGG - chr4_3:47993233-47993252 None:intergenic 45.0%
GAGAAGGGATTGCACTTGAT+GGG - chr4_3:47993234-47993253 None:intergenic 45.0%
TGAGAAGGGATTGCACTTGA+TGG - chr4_3:47993235-47993254 None:intergenic 45.0%
GGAAACGTTAACATGGGACT+TGG + chr4_3:47993343-47993362 Msa0644270:CDS 45.0%
AACATTGAAGCTGCAGCATC+TGG + chr4_3:47993592-47993611 Msa0644270:CDS 45.0%
! TCAAGAGCCACCGGTTAAAA+TGG + chr4_3:47993651-47993670 Msa0644270:CDS 45.0%
! TTTACCTGGTGGTGCCAATT+AGG - chr4_3:47992640-47992659 None:intergenic 45.0%
!! GTTGATGATTTGGTTGCTGC+AGG - chr4_3:47992832-47992851 None:intergenic 45.0%
GTCACTTCTGCAAGACATGT+AGG + chr4_3:47993077-47993096 Msa0644270:CDS 45.0%
GCAAGACATGTAGGCGTTAT+TGG + chr4_3:47993086-47993105 Msa0644270:CDS 45.0%
TGTAGGCGTTATTGGACAAG+AGG + chr4_3:47993094-47993113 Msa0644270:CDS 45.0%
GTAGGCGTTATTGGACAAGA+GGG + chr4_3:47993095-47993114 Msa0644270:CDS 45.0%
TAGGCGTTATTGGACAAGAG+GGG + chr4_3:47993096-47993115 Msa0644270:CDS 45.0%
!! AGAAATGTTCCAGTTGGTGG+AGG + chr4_3:47993127-47993146 Msa0644270:CDS 45.0%
!! GAAATGTTCCAGTTGGTGGA+GGG + chr4_3:47993128-47993147 Msa0644270:CDS 45.0%
AGAAGGGATTGCACTTGATG+GGG - chr4_3:47993233-47993252 None:intergenic 45.0%
GAGAAGGGATTGCACTTGAT+GGG - chr4_3:47993234-47993253 None:intergenic 45.0%
TGAGAAGGGATTGCACTTGA+TGG - chr4_3:47993235-47993254 None:intergenic 45.0%
GGAAACGTTAACATGGGACT+TGG + chr4_3:47993343-47993362 Msa0644270:CDS 45.0%
AACATTGAAGCTGCAGCATC+TGG + chr4_3:47993592-47993611 Msa0644270:CDS 45.0%
! TCAAGAGCCACCGGTTAAAA+TGG + chr4_3:47993651-47993670 Msa0644270:CDS 45.0%
TCCACCTTTACCACCTCAAG+TGG + chr4_3:47992883-47992902 Msa0644270:CDS 50.0%
CCACCTTTACCACCTCAAGT+GGG + chr4_3:47992884-47992903 Msa0644270:CDS 50.0%
TAAACGAGCTCGATCAGCCA+TGG - chr4_3:47992957-47992976 None:intergenic 50.0%
!! GTGTTGGTTGAATCGCAACG+AGG - chr4_3:47993016-47993035 None:intergenic 50.0%
AGAAGTGACGAGGTTGAGTG+AGG - chr4_3:47993066-47993085 None:intergenic 50.0%
CATGTCTTGCAGAAGTGACG+AGG - chr4_3:47993076-47993095 None:intergenic 50.0%
AGGCGTTATTGGACAAGAGG+GGG + chr4_3:47993097-47993116 Msa0644270:CDS 50.0%
TTCTGCATCGAGGCCATGAA+GGG - chr4_3:47993304-47993323 None:intergenic 50.0%
ATTCTGCATCGAGGCCATGA+AGG - chr4_3:47993305-47993324 None:intergenic 50.0%
ACGACTCAGATTCTGCATCG+AGG - chr4_3:47993314-47993333 None:intergenic 50.0%
GTTTCTGCTTCTGCTGTTGC+TGG + chr4_3:47993463-47993482 Msa0644270:CDS 50.0%
!! GAGGTGTTGGAGTTGAACCA+TGG + chr4_3:47993485-47993504 Msa0644270:CDS 50.0%
GCTGCAGCATCTGGATTTGT+TGG + chr4_3:47993601-47993620 Msa0644270:CDS 50.0%
TAGGGCTAATCAAGAGCCAC+CGG + chr4_3:47993642-47993661 Msa0644270:CDS 50.0%
TCCACCTTTACCACCTCAAG+TGG + chr4_3:47992883-47992902 Msa0644270:CDS 50.0%
CCACCTTTACCACCTCAAGT+GGG + chr4_3:47992884-47992903 Msa0644270:CDS 50.0%
TAAACGAGCTCGATCAGCCA+TGG - chr4_3:47992957-47992976 None:intergenic 50.0%
!! GTGTTGGTTGAATCGCAACG+AGG - chr4_3:47993016-47993035 None:intergenic 50.0%
AGAAGTGACGAGGTTGAGTG+AGG - chr4_3:47993066-47993085 None:intergenic 50.0%
CATGTCTTGCAGAAGTGACG+AGG - chr4_3:47993076-47993095 None:intergenic 50.0%
AGGCGTTATTGGACAAGAGG+GGG + chr4_3:47993097-47993116 Msa0644270:CDS 50.0%
TTCTGCATCGAGGCCATGAA+GGG - chr4_3:47993304-47993323 None:intergenic 50.0%
ATTCTGCATCGAGGCCATGA+AGG - chr4_3:47993305-47993324 None:intergenic 50.0%
ACGACTCAGATTCTGCATCG+AGG - chr4_3:47993314-47993333 None:intergenic 50.0%
GTTTCTGCTTCTGCTGTTGC+TGG + chr4_3:47993463-47993482 Msa0644270:CDS 50.0%
!! GAGGTGTTGGAGTTGAACCA+TGG + chr4_3:47993485-47993504 Msa0644270:CDS 50.0%
GCTGCAGCATCTGGATTTGT+TGG + chr4_3:47993601-47993620 Msa0644270:CDS 50.0%
TAGGGCTAATCAAGAGCCAC+CGG + chr4_3:47993642-47993661 Msa0644270:CDS 50.0%
TCCTCCTAATTGGCACCACC+AGG + chr4_3:47992633-47992652 Msa0644270:CDS 55.0%
! ACCTGGTGGTGCCAATTAGG+AGG - chr4_3:47992637-47992656 None:intergenic 55.0%
CCCACTTGAGGTGGTAAAGG+TGG - chr4_3:47992887-47992906 None:intergenic 55.0%
CCTCCCACTTGAGGTGGTAA+AGG - chr4_3:47992890-47992909 None:intergenic 55.0%
CCTTTACCACCTCAAGTGGG+AGG + chr4_3:47992887-47992906 Msa0644270:CDS 55.0%
GTACTACCTCCCACTTGAGG+TGG - chr4_3:47992896-47992915 None:intergenic 55.0%
CCAGTACTACCTCCCACTTG+AGG - chr4_3:47992899-47992918 None:intergenic 55.0%
CCTCAAGTGGGAGGTAGTAC+TGG + chr4_3:47992896-47992915 Msa0644270:CDS 55.0%
! CAAGTGGGAGGTAGTACTGG+TGG + chr4_3:47992899-47992918 Msa0644270:CDS 55.0%
!! TACTGGTGGCGGTGGTACTA+TGG + chr4_3:47992913-47992932 Msa0644270:CDS 55.0%
!! ACTGGTGGCGGTGGTACTAT+GGG + chr4_3:47992914-47992933 Msa0644270:CDS 55.0%
ACTATGGGCTCGATCAGACC+AGG + chr4_3:47992929-47992948 Msa0644270:CDS 55.0%
!! TTTAGCGCTGGTTCTGGTGG+TGG - chr4_3:47992989-47993008 None:intergenic 55.0%
!! CACTTTAGCGCTGGTTCTGG+TGG - chr4_3:47992992-47993011 None:intergenic 55.0%
!! GGACACTTTAGCGCTGGTTC+TGG - chr4_3:47992995-47993014 None:intergenic 55.0%
CAACGAGGACACTTTAGCGC+TGG - chr4_3:47993001-47993020 None:intergenic 55.0%
GAGGCCATGAAGGGTAGGTT+AGG - chr4_3:47993295-47993314 None:intergenic 55.0%
TCTGCTTCTGCTGTTGCTGG+AGG + chr4_3:47993466-47993485 Msa0644270:CDS 55.0%
! TCTGCTGTTGCTGGAGGTGT+TGG + chr4_3:47993472-47993491 Msa0644270:CDS 55.0%
TCCTCCTAATTGGCACCACC+AGG + chr4_3:47992633-47992652 Msa0644270:CDS 55.0%
! ACCTGGTGGTGCCAATTAGG+AGG - chr4_3:47992637-47992656 None:intergenic 55.0%
CCCACTTGAGGTGGTAAAGG+TGG - chr4_3:47992887-47992906 None:intergenic 55.0%
CCTCCCACTTGAGGTGGTAA+AGG - chr4_3:47992890-47992909 None:intergenic 55.0%
CCTTTACCACCTCAAGTGGG+AGG + chr4_3:47992887-47992906 Msa0644270:CDS 55.0%
GTACTACCTCCCACTTGAGG+TGG - chr4_3:47992896-47992915 None:intergenic 55.0%
CCAGTACTACCTCCCACTTG+AGG - chr4_3:47992899-47992918 None:intergenic 55.0%
CCTCAAGTGGGAGGTAGTAC+TGG + chr4_3:47992896-47992915 Msa0644270:CDS 55.0%
! CAAGTGGGAGGTAGTACTGG+TGG + chr4_3:47992899-47992918 Msa0644270:CDS 55.0%
!! TACTGGTGGCGGTGGTACTA+TGG + chr4_3:47992913-47992932 Msa0644270:CDS 55.0%
!! ACTGGTGGCGGTGGTACTAT+GGG + chr4_3:47992914-47992933 Msa0644270:CDS 55.0%
ACTATGGGCTCGATCAGACC+AGG + chr4_3:47992929-47992948 Msa0644270:CDS 55.0%
!! TTTAGCGCTGGTTCTGGTGG+TGG - chr4_3:47992989-47993008 None:intergenic 55.0%
!! CACTTTAGCGCTGGTTCTGG+TGG - chr4_3:47992992-47993011 None:intergenic 55.0%
!! GGACACTTTAGCGCTGGTTC+TGG - chr4_3:47992995-47993014 None:intergenic 55.0%
CAACGAGGACACTTTAGCGC+TGG - chr4_3:47993001-47993020 None:intergenic 55.0%
GAGGCCATGAAGGGTAGGTT+AGG - chr4_3:47993295-47993314 None:intergenic 55.0%
TCTGCTTCTGCTGTTGCTGG+AGG + chr4_3:47993466-47993485 Msa0644270:CDS 55.0%
! TCTGCTGTTGCTGGAGGTGT+TGG + chr4_3:47993472-47993491 Msa0644270:CDS 55.0%
!! GTGGGAGGTAGTACTGGTGG+CGG + chr4_3:47992902-47992921 Msa0644270:CDS 60.0%
CTCGATCAGACCAGGCTCCA+TGG + chr4_3:47992937-47992956 Msa0644270:CDS 60.0%
CTACGACACCCTCCACCAAC+TGG - chr4_3:47993139-47993158 None:intergenic 60.0%
GCATCGAGGCCATGAAGGGT+AGG - chr4_3:47993300-47993319 None:intergenic 60.0%
!! GTGGGAGGTAGTACTGGTGG+CGG + chr4_3:47992902-47992921 Msa0644270:CDS 60.0%
CTCGATCAGACCAGGCTCCA+TGG + chr4_3:47992937-47992956 Msa0644270:CDS 60.0%
CTACGACACCCTCCACCAAC+TGG - chr4_3:47993139-47993158 None:intergenic 60.0%
GCATCGAGGCCATGAAGGGT+AGG - chr4_3:47993300-47993319 None:intergenic 60.0%
!! GGAGGTAGTACTGGTGGCGG+TGG + chr4_3:47992905-47992924 Msa0644270:CDS 65.0%
GCTCGATCAGCCATGGAGCC+TGG - chr4_3:47992950-47992969 None:intergenic 65.0%
!! GGAGGTAGTACTGGTGGCGG+TGG + chr4_3:47992905-47992924 Msa0644270:CDS 65.0%
GCTCGATCAGCCATGGAGCC+TGG - chr4_3:47992950-47992969 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 47992591 47994093 47992591 ID=Msa0644270;Name=Msa0644270
chr4_3 mRNA 47992591 47994093 47992591 ID=Msa0644270-mRNA-1;Parent=Msa0644270;Name=Msa0644270-mRNA-1;_AED=0.01;_eAED=0.01;_QI=10|1|1|1|1|1|2|301|336
chr4_3 exon 47992591 47992654 47992591 ID=Msa0644270-mRNA-1:exon:11380;Parent=Msa0644270-mRNA-1
chr4_3 exon 47992836 47994093 47992836 ID=Msa0644270-mRNA-1:exon:11381;Parent=Msa0644270-mRNA-1
chr4_3 five_prime_UTR 47992591 47992600 47992591 ID=Msa0644270-mRNA-1:five_prime_utr;Parent=Msa0644270-mRNA-1
chr4_3 CDS 47992601 47992654 47992601 ID=Msa0644270-mRNA-1:cds;Parent=Msa0644270-mRNA-1
chr4_3 CDS 47992836 47993792 47992836 ID=Msa0644270-mRNA-1:cds;Parent=Msa0644270-mRNA-1
chr4_3 three_prime_UTR 47993793 47994093 47993793 ID=Msa0644270-mRNA-1:three_prime_utr;Parent=Msa0644270-mRNA-1
Gene Sequence

>Msa0644270

ATGGTTTTCTCTTCTATTCAAGGTTATGTAGATCCTCCTAATTGGCACCACCAGCAACCAAATCATCAACAAGCAAATGGAAGCAATAACACTCAACTTCTTCCACCTTTACCACCTCAAGTGGGAGGTAGTACTGGTGGCGGTGGTACTATGGGCTCGATCAGACCAGGCTCCATGGCTGATCGAGCTCGTTTAGCAAAACTACCACCACCAGAACCAGCGCTAAAGTGTCCTCGTTGCGATTCAACCAACACTAAATTTTGCTACTTCAACAACTACAGCCTCACTCAACCTCGTCACTTCTGCAAGACATGTAGGCGTTATTGGACAAGAGGGGGTGCACTTAGAAATGTTCCAGTTGGTGGAGGGTGTCGTAGAAACAACAAGAAAAACAAAAGAAGCCGTTCAAAATCTCCTAATTCAACAAACTCTCAAGAAAAACAAACTTCCCCATCAAGTGCAATCCCTTCTCATCATGAACTAATTGGTCATCAGTTACCACAAACAATTCCTAACCTACCCTTCATGGCCTCGATGCAGAATCTGAGTCGTTATGTCGTTGGAAACGTTAACATGGGACTTGGTTTGCGTGAGATCCAAGAACAACATCAACAACAACAACAACAAGATCATATGGGGTTTCAAATTGGTATTGGTAATGGTAACTCAACTTCTGTTTCTGTTTCTGCTTCTGCTGTTGCTGGAGGTGTTGGAGTTGAACCATGGCGTAATTTGCAGCAATTTCCTTTCTTGAATACTTTTGAATCAAACTCTGCTGGAAATAATTCATACACTTTTCATGGAGAAAGTAACATTGAAGCTGCAGCATCTGGATTTGTTGGAGATATAGCTTCAAACTCTAGGGCTAATCAAGAGCCACCGGTTAAAATGGAAGAAAATCGAGCTTTAAATCTATCAAGAACATCCCTTGGTGTCTCTGAACATAATAACCAACAACAATACTATTCTTGGAATGATTTATCAGGCTCTTCAACTACTCATCTCTTATAA
Protein sequence

>Msa0644270

MVFSSIQGYVDPPNWHHQQPNHQQANGSNNTQLLPPLPPQVGGSTGGGGTMGSIRPGSMADRARLAKLPPPEPALKCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNNKKNKRSRSKSPNSTNSQEKQTSPSSAIPSHHELIGHQLPQTIPNLPFMASMQNLSRYVVGNVNMGLGLREIQEQHQQQQQQDHMGFQIGIGNGNSTSVSVSASAVAGGVGVEPWRNLQQFPFLNTFESNSAGNNSYTFHGESNIEAAASGFVGDIASNSRANQEPPVKMEENRALNLSRTSLGVSEHNNQQQYYSWNDLSGSSTTHLL*