Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0648940 | XP_013442471.1 | 94.979 | 239 | 8 | 1 | 1 | 239 | 1 | 235 | 1.55e-161 | 456 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0648940 | sp|O23708|PSA2A_ARATH | 89.540 | 239 | 21 | 1 | 1 | 239 | 1 | 235 | 4.35e-155 | 432 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0111330 | Msa0648940 | 0.805797 | 1.122531e-49 | -8.615850e-47 |
| Msa0648940 | Msa0707390 | 0.820023 | 8.537777e-53 | -8.615850e-47 |
| Msa0648940 | Msa0905990 | 0.804274 | 2.337477e-49 | -8.615850e-47 |
| Msa0648940 | Msa0947530 | -0.800896 | 1.162480e-48 | -8.615850e-47 |
| Msa0648940 | Msa0979810 | 0.815467 | 9.108511e-52 | -8.615850e-47 |
| Msa0648940 | Msa1166870 | 0.800773 | 1.231710e-48 | -8.615850e-47 |
| Msa0648940 | Msa1201830 | 0.801273 | 9.733148e-49 | -8.615850e-47 |
| Msa0259160 | Msa0648940 | 0.806225 | 9.122795e-50 | -8.615850e-47 |
| Msa0262480 | Msa0648940 | 0.802852 | 4.609531e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0648940 | MtrunA17_Chr0c02g0489661 | 94.979 | 239 | 8 | 1 | 1 | 239 | 1 | 235 | 1.43e-165 | 456 |
| Msa0648940 | MtrunA17_Chr2g0308541 | 39.149 | 235 | 134 | 5 | 6 | 235 | 9 | 239 | 2.07e-50 | 164 |
| Msa0648940 | MtrunA17_Chr8g0371571 | 38.627 | 233 | 130 | 5 | 4 | 232 | 2 | 225 | 1.04e-48 | 160 |
| Msa0648940 | MtrunA17_Chr8g0360781 | 37.447 | 235 | 138 | 5 | 6 | 235 | 9 | 239 | 2.03e-44 | 149 |
| Msa0648940 | MtrunA17_Chr7g0243311 | 35.714 | 238 | 142 | 5 | 5 | 235 | 4 | 237 | 3.67e-44 | 149 |
| Msa0648940 | MtrunA17_Chr2g0283841 | 36.797 | 231 | 137 | 4 | 4 | 232 | 2 | 225 | 8.52e-43 | 145 |
| Msa0648940 | MtrunA17_Chr1g0210811 | 35.043 | 234 | 139 | 4 | 4 | 232 | 6 | 231 | 1.31e-42 | 144 |
| Msa0648940 | MtrunA17_Chr5g0401801 | 39.896 | 193 | 110 | 3 | 5 | 195 | 4 | 192 | 4.69e-42 | 142 |
| Msa0648940 | MtrunA17_Chr1g0155371 | 33.624 | 229 | 143 | 4 | 1 | 226 | 1 | 223 | 1.50e-36 | 130 |
| Msa0648940 | MtrunA17_Chr6g0459741 | 35.359 | 181 | 113 | 1 | 6 | 186 | 8 | 184 | 2.73e-35 | 125 |
| Msa0648940 | MtrunA17_Chr4g0004521 | 29.864 | 221 | 132 | 6 | 20 | 226 | 7 | 218 | 9.75e-23 | 93.6 |
| Msa0648940 | MtrunA17_Chr6g0453891 | 29.016 | 193 | 121 | 6 | 32 | 218 | 136 | 318 | 6.69e-13 | 67.0 |
| Msa0648940 | MtrunA17_Chr4g0027841 | 26.160 | 237 | 159 | 8 | 9 | 238 | 91 | 318 | 8.64e-13 | 66.6 |
| Msa0648940 | MtrunA17_Chr3g0142511 | 32.692 | 104 | 67 | 2 | 126 | 226 | 30 | 133 | 2.04e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0648940 | AT1G16470.1 | 89.540 | 239 | 21 | 1 | 1 | 239 | 1 | 235 | 4.42e-156 | 432 |
| Msa0648940 | AT1G16470.2 | 89.540 | 239 | 21 | 1 | 1 | 239 | 1 | 235 | 4.42e-156 | 432 |
| Msa0648940 | AT1G79210.1 | 88.703 | 239 | 23 | 1 | 1 | 239 | 1 | 235 | 5.51e-155 | 430 |
| Msa0648940 | AT1G79210.2 | 88.703 | 239 | 23 | 1 | 1 | 239 | 1 | 235 | 5.51e-155 | 430 |
| Msa0648940 | AT1G79210.3 | 88.703 | 239 | 23 | 1 | 1 | 239 | 1 | 235 | 5.51e-155 | 430 |
| Msa0648940 | AT5G66140.1 | 38.889 | 234 | 129 | 6 | 4 | 232 | 2 | 226 | 3.84e-47 | 157 |
| Msa0648940 | AT3G51260.1 | 38.462 | 234 | 130 | 6 | 4 | 232 | 2 | 226 | 1.07e-45 | 153 |
| Msa0648940 | AT3G51260.2 | 39.450 | 218 | 119 | 5 | 4 | 217 | 2 | 210 | 1.41e-45 | 152 |
| Msa0648940 | AT5G35590.1 | 36.596 | 235 | 140 | 5 | 6 | 235 | 9 | 239 | 8.95e-45 | 150 |
| Msa0648940 | AT1G53850.1 | 35.043 | 234 | 139 | 4 | 4 | 232 | 6 | 231 | 1.50e-42 | 144 |
| Msa0648940 | AT1G53850.2 | 35.043 | 234 | 139 | 4 | 4 | 232 | 6 | 231 | 1.50e-42 | 144 |
| Msa0648940 | AT3G14290.1 | 35.043 | 234 | 139 | 4 | 4 | 232 | 6 | 231 | 2.81e-42 | 144 |
| Msa0648940 | AT2G05840.1 | 35.319 | 235 | 143 | 5 | 6 | 235 | 9 | 239 | 5.87e-42 | 143 |
| Msa0648940 | AT3G22110.1 | 34.764 | 233 | 138 | 5 | 5 | 234 | 4 | 225 | 2.42e-41 | 142 |
| Msa0648940 | AT5G42790.1 | 36.245 | 229 | 137 | 5 | 1 | 226 | 1 | 223 | 1.73e-38 | 135 |
| Msa0648940 | AT1G47250.1 | 34.615 | 234 | 144 | 5 | 1 | 231 | 1 | 228 | 8.71e-37 | 130 |
| Msa0648940 | AT2G05840.2 | 34.272 | 213 | 132 | 4 | 6 | 214 | 9 | 217 | 7.35e-36 | 127 |
| Msa0648940 | AT2G05840.3 | 35.165 | 182 | 112 | 3 | 6 | 185 | 9 | 186 | 1.63e-32 | 117 |
| Msa0648940 | AT2G27020.1 | 31.193 | 218 | 145 | 2 | 6 | 222 | 8 | 221 | 2.60e-32 | 118 |
| Msa0648940 | AT2G27020.2 | 31.193 | 218 | 145 | 2 | 6 | 222 | 110 | 323 | 4.42e-31 | 117 |
| Msa0648940 | AT4G15165.1 | 26.180 | 233 | 116 | 5 | 5 | 234 | 4 | 183 | 1.04e-19 | 84.3 |
Find 78 sgRNAs with CRISPR-Local
Find 391 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGAAGGATTGCAAAGATTT+TGG | 0.131887 | 4_3:+55542785 | None:intergenic |
| AGCTGAAATTGATGATTATT+TGG | 0.158426 | 4_3:-55537231 | Msa0648940:CDS |
| AATAAATTAGTGTTTATTAA+AGG | 0.210676 | 4_3:+55536957 | None:intergenic |
| GGAGTGTCTCTGCTTGTTGC+TGG | 0.248519 | 4_3:-55539815 | Msa0648940:CDS |
| CTTATTTATTTGCGATGAAT+TGG | 0.258291 | 4_3:-55536903 | Msa0648940:three_prime_UTR |
| GCTTTAACCGCTGTTGGTTC+TGG | 0.270331 | 4_3:-55542263 | Msa0648940:CDS |
| GAATTGGGGATCTTAAATTA+AGG | 0.298804 | 4_3:-55536887 | Msa0648940:three_prime_UTR |
| GAAGAAACTTCCATCTATAT+TGG | 0.314529 | 4_3:-55542189 | Msa0648940:CDS |
| TTCTAGGTGCACCGATGATA+TGG | 0.318047 | 4_3:-55539210 | Msa0648940:intron |
| ATGCAGGAATTTACTCAGTC+TGG | 0.330425 | 4_3:-55540620 | Msa0648940:CDS |
| AGGTGCAATCGGATAATAAA+AGG | 0.343590 | 4_3:+55536929 | None:intergenic |
| GTTGCTGGGTTTGATGATAA+TGG | 0.347033 | 4_3:-55539800 | Msa0648940:CDS |
| TTATTTATTTGCGATGAATT+GGG | 0.353079 | 4_3:-55536902 | Msa0648940:three_prime_UTR |
| GTCTTTGTTGTTCAGTGGCA+TGG | 0.357696 | 4_3:-55541133 | Msa0648940:intron |
| CGAACCAATACTCGGAAATC+AGG | 0.360536 | 4_3:+55541108 | None:intergenic |
| ACAAGATGCTAAGATAATTC+AGG | 0.365742 | 4_3:+55536861 | None:intergenic |
| AACATTGAAATCGGCATCAT+TGG | 0.369450 | 4_3:-55538577 | Msa0648940:CDS |
| CAAACATAGGTGTTGTATAC+AGG | 0.379055 | 4_3:-55542032 | Msa0648940:intron |
| TGCTTCGAGAGGAACTGTTT+TGG | 0.381376 | 4_3:+55542744 | None:intergenic |
| GATAGTGGTGTCCGGCCATT+TGG | 0.384275 | 4_3:-55539836 | Msa0648940:intron |
| CTTCATTGATCAACCCATCT+TGG | 0.393697 | 4_3:+55537123 | None:intergenic |
| GCTGAAATTGATGATTATTT+GGG | 0.402207 | 4_3:-55537230 | Msa0648940:CDS |
| ATGAAATAAACACCAACTTC+GGG | 0.412111 | 4_3:+55537165 | None:intergenic |
| GCTTGATCAACCAATATAGA+TGG | 0.416946 | 4_3:+55542179 | None:intergenic |
| TAATGGACCACAATTATATC+AGG | 0.419454 | 4_3:-55539783 | Msa0648940:intron |
| TATGGTAATTCTGATGACTT+TGG | 0.433271 | 4_3:+55537051 | None:intergenic |
| CTCGGTATCAAAGCTGCAAA+TGG | 0.434339 | 4_3:-55542230 | Msa0648940:CDS |
| GAGTGTCTCTGCTTGTTGCT+GGG | 0.436297 | 4_3:-55539814 | Msa0648940:CDS |
| GGAAGAGGAGATGACAATGA+AGG | 0.436563 | 4_3:+55542765 | None:intergenic |
| TTGCTGTAGGTGGATCCATC+AGG | 0.438333 | 4_3:-55539515 | Msa0648940:intron |
| TCCCTGTCACTCAACTTGTA+AGG | 0.441365 | 4_3:-55540658 | Msa0648940:CDS |
| ACACCAACTTCGGGAACATA+AGG | 0.445040 | 4_3:+55537174 | None:intergenic |
| GGGTCCTGATTTCCGAGTAT+TGG | 0.446397 | 4_3:-55541112 | Msa0648940:CDS |
| TAAATAAGATAAGGTGCAAT+CGG | 0.451592 | 4_3:+55536918 | None:intergenic |
| TCTTGGAAAGCTTCTGCTAT+GGG | 0.454997 | 4_3:-55539482 | Msa0648940:CDS |
| CATCCTTATGTTCCCGAAGT+TGG | 0.459206 | 4_3:-55537177 | Msa0648940:three_prime_UTR |
| ACAAGTTGAGTGACAGGGAT+TGG | 0.462122 | 4_3:+55540662 | None:intergenic |
| GGAAGTTGCTGCCGTTATGC+AGG | 0.465077 | 4_3:-55540636 | Msa0648940:CDS |
| TATGAAATAAACACCAACTT+CGG | 0.469621 | 4_3:+55537164 | None:intergenic |
| TCTTTGTTGTTCAGTGGCAT+GGG | 0.469804 | 4_3:-55541132 | Msa0648940:intron |
| TTCTTGGAAAGCTTCTGCTA+TGG | 0.473689 | 4_3:-55539483 | Msa0648940:CDS |
| AATAAATAGAATAGAAAGAA+GGG | 0.475660 | 4_3:+55542920 | None:intergenic |
| TCCCTTACAAGTTGAGTGAC+AGG | 0.479106 | 4_3:+55540656 | None:intergenic |
| TTTGTCCTGATAGTGGTGTC+CGG | 0.494424 | 4_3:-55539844 | Msa0648940:intron |
| CTGTATACAACACCTATGTT+TGG | 0.497013 | 4_3:+55542033 | None:intergenic |
| CATCGCAAATAAATAAGATA+AGG | 0.497739 | 4_3:+55536909 | None:intergenic |
| AAATAAATAGAATAGAAAGA+AGG | 0.500812 | 4_3:+55542919 | None:intergenic |
| AGTTTAATTGAATTCCAAGA+TGG | 0.501437 | 4_3:-55537137 | Msa0648940:three_prime_UTR |
| GAGCATGCTTTAACCGCTGT+TGG | 0.504625 | 4_3:-55542269 | Msa0648940:CDS |
| CTAAGACATTTCTTGAGAAG+AGG | 0.508140 | 4_3:-55539442 | Msa0648940:intron |
| TCGATTGTGTTGGTTTCGTA+CGG | 0.512844 | 4_3:+55542881 | None:intergenic |
| TGCAGGAATTTACTCAGTCT+GGG | 0.516768 | 4_3:-55540619 | Msa0648940:intron |
| GGTTCTGGACAAACTTCTCT+CGG | 0.526164 | 4_3:-55542248 | Msa0648940:CDS |
| TATTTATTTGCGATGAATTG+GGG | 0.527893 | 4_3:-55536901 | Msa0648940:three_prime_UTR |
| AGTTTCAAATTCGATTGTGT+TGG | 0.533638 | 4_3:+55542871 | None:intergenic |
| AAATAATCATCAATTTCAGC+TGG | 0.537679 | 4_3:+55537233 | None:intergenic |
| CCCTGTCACTCAACTTGTAA+GGG | 0.541679 | 4_3:-55540657 | Msa0648940:CDS |
| CTGAGTAAATTCCTGCATAA+CGG | 0.544918 | 4_3:+55540625 | None:intergenic |
| GAGGAGATGACAATGAAGGA+AGG | 0.547031 | 4_3:+55542769 | None:intergenic |
| CCCTTACAAGTTGAGTGACA+GGG | 0.551681 | 4_3:+55540657 | None:intergenic |
| TTAAATGTATGATATGTGAA+TGG | 0.573767 | 4_3:-55536980 | Msa0648940:three_prime_UTR |
| ACAAGCAGAGACACTCCAAA+TGG | 0.574302 | 4_3:+55539821 | None:intergenic |
| GTTTAATTGAATTCCAAGAT+GGG | 0.576167 | 4_3:-55537136 | Msa0648940:three_prime_UTR |
| GCAATATTGACACTCAAGGA+AGG | 0.576853 | 4_3:-55539164 | Msa0648940:CDS |
| GCAGAGACACTCCAAATGGC+CGG | 0.585825 | 4_3:+55539825 | None:intergenic |
| TGCCATACCTGATATAATTG+TGG | 0.592498 | 4_3:+55539776 | None:intergenic |
| CAACTTCGGGAACATAAGGA+TGG | 0.599592 | 4_3:+55537178 | None:intergenic |
| ATCATCAAGCTCCATATCAT+CGG | 0.601420 | 4_3:+55539199 | None:intergenic |
| TGTTTCAAAATTGCTTCGAG+AGG | 0.603777 | 4_3:+55542733 | None:intergenic |
| CAGTTATTAACACCAAACAT+AGG | 0.608948 | 4_3:-55542045 | Msa0648940:CDS |
| CACAGCAATATTGACACTCA+AGG | 0.611442 | 4_3:-55539168 | Msa0648940:CDS |
| ATGAAGACTTGTGATGGCAC+TGG | 0.611959 | 4_3:-55537106 | Msa0648940:three_prime_UTR |
| ATTTGAACAAGCTTACCAGA+AGG | 0.622818 | 4_3:+55542293 | None:intergenic |
| CAATATTGACACTCAAGGAA+GGG | 0.636489 | 4_3:-55539163 | Msa0648940:intron |
| TGATCAATGAAGACTTGTGA+TGG | 0.639717 | 4_3:-55537112 | Msa0648940:three_prime_UTR |
| CTTGGAAAGCTTCTGCTATG+GGG | 0.641428 | 4_3:-55539481 | Msa0648940:CDS |
| TGAGTGTCAATATTGCTGTG+TGG | 0.689041 | 4_3:+55539171 | None:intergenic |
| AGTTTGTCCAGAACCAACAG+CGG | 0.695714 | 4_3:+55542256 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTAAATTTTTTTATTTAA+GGG | + | chr4_3:55537008-55537027 | None:intergenic | 0.0% |
| !!! | CTAAAATTTTATGTTAATTT+GGG | - | chr4_3:55537364-55537383 | Msa0648940:intron | 10.0% |
| !! | AGACAAATTAAAAAAAAAAA+AGG | + | chr4_3:55539465-55539484 | None:intergenic | 10.0% |
| !!! | TATGCAATATATATTTTTAA+TGG | - | chr4_3:55542283-55542302 | Msa0648940:CDS | 10.0% |
| !! | AAAAAAAAAAAAAAAAAGCT+GGG | + | chr4_3:55542802-55542821 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAAAAAGC+TGG | + | chr4_3:55542803-55542822 | None:intergenic | 10.0% |
| !!! | AGCTTTTTTTTTTTTTTTTT+TGG | - | chr4_3:55542802-55542821 | Msa0648940:five_prime_UTR | 10.0% |
| !! | AATAAATTAGTGTTTATTAA+AGG | + | chr4_3:55542869-55542888 | None:intergenic | 10.0% |
| !! | AATAAATAGAATAGAAAGAA+GGG | + | chr4_3:55536906-55536925 | None:intergenic | 15.0% |
| !! | AAATAAATAGAATAGAAAGA+AGG | + | chr4_3:55536907-55536926 | None:intergenic | 15.0% |
| !! | TTCAGAAAATTTATATGAAA+AGG | - | chr4_3:55537324-55537343 | Msa0648940:intron | 15.0% |
| !! | TCAGAAAATTTATATGAAAA+GGG | - | chr4_3:55537325-55537344 | Msa0648940:intron | 15.0% |
| !!! | GCTAAAATTTTATGTTAATT+TGG | - | chr4_3:55537363-55537382 | Msa0648940:intron | 15.0% |
| !!! | GTTTTTTATTGTGATTTTAT+AGG | - | chr4_3:55537459-55537478 | Msa0648940:intron | 15.0% |
| !! | TAAGTTAAAACATATTTGTA+TGG | - | chr4_3:55537838-55537857 | Msa0648940:intron | 15.0% |
| !! | CTTATTAAAGAATTAATAGA+AGG | - | chr4_3:55538256-55538275 | Msa0648940:intron | 15.0% |
| !! | AAGTAATTTATAAATGTACT+TGG | - | chr4_3:55538350-55538369 | Msa0648940:intron | 15.0% |
| !! | TATATTGTTTAAATGTTACT+TGG | - | chr4_3:55538851-55538870 | Msa0648940:intron | 15.0% |
| !! | TAAAATTGAAAAGTTAATGA+AGG | + | chr4_3:55539948-55539967 | None:intergenic | 15.0% |
| !!! | GAAATATGATATTTTCATTA+AGG | + | chr4_3:55540722-55540741 | None:intergenic | 15.0% |
| !!! | TCCCTTTTATTTTATTTTTT+CGG | - | chr4_3:55541188-55541207 | Msa0648940:intron | 15.0% |
| !! | ACCGAAAAAATAAAATAAAA+GGG | + | chr4_3:55541192-55541211 | None:intergenic | 15.0% |
| !! | AAATAAATAAACACTGAAAA+GGG | + | chr4_3:55541349-55541368 | None:intergenic | 15.0% |
| !!! | TAATTTGTTAATTATATTGC+AGG | - | chr4_3:55542558-55542577 | Msa0648940:intron | 15.0% |
| !!! | AATTTGTTAATTATATTGCA+GGG | - | chr4_3:55542559-55542578 | Msa0648940:intron | 15.0% |
| !!! | TGATTTTATAGGTATATCAT+GGG | - | chr4_3:55537470-55537489 | Msa0648940:intron | 20.0% |
| !!! | ATGTTTTAACTTATTTGAAG+AGG | + | chr4_3:55537831-55537850 | None:intergenic | 20.0% |
| !! | TCATATACTAAAAGTTCAAA+CGG | + | chr4_3:55538612-55538631 | None:intergenic | 20.0% |
| !! | AAGAATTTCGCAATATAAAA+TGG | + | chr4_3:55538792-55538811 | None:intergenic | 20.0% |
| !!! | ATGCATCTTTTGTTAAAAAT+AGG | - | chr4_3:55539101-55539120 | Msa0648940:intron | 20.0% |
| !! | TTAAAAAAAAAAAAGGACAC+AGG | + | chr4_3:55539458-55539477 | None:intergenic | 20.0% |
| !!! | TTTTTTTTAGTGAAGACAAT+AGG | + | chr4_3:55539558-55539577 | None:intergenic | 20.0% |
| !! | TAGCTAAATTAAATGTTTAG+TGG | - | chr4_3:55539627-55539646 | Msa0648940:intron | 20.0% |
| !!! | ATTAATGATGACAATGTTTT+AGG | - | chr4_3:55540415-55540434 | Msa0648940:intron | 20.0% |
| !!! | CAATTTAAAACACTGAATTA+AGG | + | chr4_3:55540853-55540872 | None:intergenic | 20.0% |
| !!! | CTTAATTCAGTGTTTTAAAT+TGG | - | chr4_3:55540851-55540870 | Msa0648940:intron | 20.0% |
| !! | CACCGAAAAAATAAAATAAA+AGG | + | chr4_3:55541193-55541212 | None:intergenic | 20.0% |
| !! | CAAATAAATAAACACTGAAA+AGG | + | chr4_3:55541350-55541369 | None:intergenic | 20.0% |
| !!! | CAAACTTATTTATAGCTTTT+AGG | + | chr4_3:55541448-55541467 | None:intergenic | 20.0% |
| !! | AAAAGCTATAAATAAGTTTG+AGG | - | chr4_3:55541448-55541467 | Msa0648940:intron | 20.0% |
| !!! | GCAATATATATTTTTAATGG+AGG | - | chr4_3:55542286-55542305 | Msa0648940:CDS | 20.0% |
| !!! | TTTCTTTTCTTAATTTTTGC+TGG | - | chr4_3:55542464-55542483 | Msa0648940:intron | 20.0% |
| !! | TTAAATGTATGATATGTGAA+TGG | - | chr4_3:55542843-55542862 | Msa0648940:five_prime_UTR | 20.0% |
| !! | TTATTTATTTGCGATGAATT+GGG | - | chr4_3:55542921-55542940 | Msa0648940:five_prime_UTR | 20.0% |
| !! | AAAACACAATTTTCTAACCT+TGG | + | chr4_3:55537117-55537136 | None:intergenic | 25.0% |
| ! | AATGACATGAATTGAAAAGA+GGG | + | chr4_3:55537161-55537180 | None:intergenic | 25.0% |
| !! | TACCATCAATTTAGAGTTTA+TGG | - | chr4_3:55537277-55537296 | Msa0648940:intron | 25.0% |
| !!! | TCTTTTTCAAAATGTGAACT+TGG | + | chr4_3:55537409-55537428 | None:intergenic | 25.0% |
| !! | GTGATTTTATAGGTATATCA+TGG | - | chr4_3:55537469-55537488 | Msa0648940:intron | 25.0% |
| ! | AATCAAGTGAACAATCATAA+TGG | + | chr4_3:55537710-55537729 | None:intergenic | 25.0% |
| !! | GTGTTAATAACTGAATTTTC+TGG | + | chr4_3:55537771-55537790 | None:intergenic | 25.0% |
| !! | TTATTTCTTTCTTTGTACAG+TGG | - | chr4_3:55537866-55537885 | Msa0648940:intron | 25.0% |
| ! | TAATTACTGTATGTATAGAG+TGG | - | chr4_3:55538210-55538229 | Msa0648940:intron | 25.0% |
| ! | GTATAAAAAGAAAACAGAGA+GGG | + | chr4_3:55538471-55538490 | None:intergenic | 25.0% |
| ! | AGTATAAAAAGAAAACAGAG+AGG | + | chr4_3:55538472-55538491 | None:intergenic | 25.0% |
| ! | CGATACTTGAAAACAATTTA+AGG | + | chr4_3:55538649-55538668 | None:intergenic | 25.0% |
| ! | AATATTTGGTCAATATGACT+CGG | - | chr4_3:55538827-55538846 | Msa0648940:intron | 25.0% |
| !! | ATCTTTTGTTAAAAATAGGC+AGG | - | chr4_3:55539105-55539124 | Msa0648940:intron | 25.0% |
| ! | TATTGTAAGCAAAAAATTGC+AGG | - | chr4_3:55539136-55539155 | Msa0648940:intron | 25.0% |
| ! | ACATATATGGTAAAGTTCAA+CGG | + | chr4_3:55539307-55539326 | None:intergenic | 25.0% |
| ! | ATAAGCTATGAGTACATATA+TGG | + | chr4_3:55539320-55539339 | None:intergenic | 25.0% |
| !!! | TATTTTTCCTTTTTTTGGAG+TGG | + | chr4_3:55539357-55539376 | None:intergenic | 25.0% |
| !!! | CTCTCTATTTTTCCTTTTTT+TGG | + | chr4_3:55539362-55539381 | None:intergenic | 25.0% |
| ! | TGAGGATAAATTACAAAACA+CGG | + | chr4_3:55539395-55539414 | None:intergenic | 25.0% |
| !!! | TGTTGAATCTTTTTTAGTGA+GGG | + | chr4_3:55539499-55539518 | None:intergenic | 25.0% |
| ! | TCAACATTTAATGATAATCG+GGG | + | chr4_3:55539669-55539688 | None:intergenic | 25.0% |
| ! | CTCAACATTTAATGATAATC+GGG | + | chr4_3:55539670-55539689 | None:intergenic | 25.0% |
| ! | CCTCAACATTTAATGATAAT+CGG | + | chr4_3:55539671-55539690 | None:intergenic | 25.0% |
| ! | CGATTATCATTAAATGTTGA+GGG | - | chr4_3:55539669-55539688 | Msa0648940:intron | 25.0% |
| ! | AATTGCTTAGATAAACATTG+TGG | - | chr4_3:55539809-55539828 | Msa0648940:CDS | 25.0% |
| ! | AATTGAAAAGTTAATGAAGG+AGG | + | chr4_3:55539945-55539964 | None:intergenic | 25.0% |
| !!! | TTATTTTTTTGTCCTGATAG+TGG | - | chr4_3:55539972-55539991 | Msa0648940:intron | 25.0% |
| !! | CTTTAAAAAATTCTAAGTGC+AGG | + | chr4_3:55540227-55540246 | None:intergenic | 25.0% |
| !!! | CTGCACTTAGAATTTTTTAA+AGG | - | chr4_3:55540225-55540244 | Msa0648940:intron | 25.0% |
| !!! | AGAAAATTGAAGGTTGTTTT+TGG | - | chr4_3:55540273-55540292 | Msa0648940:intron | 25.0% |
| !! | TTTCATTCTTAGAGTTGATT+AGG | - | chr4_3:55540738-55540757 | Msa0648940:intron | 25.0% |
| ! | GGTTCAAATGAAAAAAATAG+AGG | - | chr4_3:55540905-55540924 | Msa0648940:intron | 25.0% |
| !! | CAGCTTATGATAATTTTAGA+GGG | + | chr4_3:55540997-55541016 | None:intergenic | 25.0% |
| !! | TCAGCTTATGATAATTTTAG+AGG | + | chr4_3:55540998-55541017 | None:intergenic | 25.0% |
| ! | ACATAAAAACTGTCAATGAA+GGG | + | chr4_3:55541096-55541115 | None:intergenic | 25.0% |
| ! | AACATAAAAACTGTCAATGA+AGG | + | chr4_3:55541097-55541116 | None:intergenic | 25.0% |
| ! | TCAGCAAAAAACATTGAAAT+CGG | - | chr4_3:55541237-55541256 | Msa0648940:intron | 25.0% |
| ! | TTGTTCCCTAAAATATACTT+TGG | - | chr4_3:55541297-55541316 | Msa0648940:intron | 25.0% |
| ! | TGAGCTAAAAATTATGCTAT+CGG | - | chr4_3:55541406-55541425 | Msa0648940:intron | 25.0% |
| !! | ATAAATAAGTTTGAGGCATT+CGG | - | chr4_3:55541455-55541474 | Msa0648940:intron | 25.0% |
| ! | TCTAAACTATAAAACAAACC+AGG | + | chr4_3:55542133-55542152 | None:intergenic | 25.0% |
| !!! | ATGTCATTGATTTCAAAACA+TGG | + | chr4_3:55542206-55542225 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTACCAATGCAAA+TGG | - | chr4_3:55542409-55542428 | Msa0648940:intron | 25.0% |
| !! | TTTTCTTAATTTTTGCTGGT+GGG | - | chr4_3:55542468-55542487 | Msa0648940:intron | 25.0% |
| ! | AAATAATCATCAATTTCAGC+TGG | + | chr4_3:55542593-55542612 | None:intergenic | 25.0% |
| !! | AGCTGAAATTGATGATTATT+TGG | - | chr4_3:55542592-55542611 | Msa0648940:intron | 25.0% |
| !! | GCTGAAATTGATGATTATTT+GGG | - | chr4_3:55542593-55542612 | Msa0648940:intron | 25.0% |
| ! | TATGAAATAAACACCAACTT+CGG | + | chr4_3:55542662-55542681 | None:intergenic | 25.0% |
| ! | AGTTTAATTGAATTCCAAGA+TGG | - | chr4_3:55542686-55542705 | Msa0648940:intron | 25.0% |
| ! | GTTTAATTGAATTCCAAGAT+GGG | - | chr4_3:55542687-55542706 | Msa0648940:intron | 25.0% |
| ! | ATCATACATTTAAACAAGCT+GGG | + | chr4_3:55542836-55542855 | None:intergenic | 25.0% |
| ! | TATCATACATTTAAACAAGC+TGG | + | chr4_3:55542837-55542856 | None:intergenic | 25.0% |
| ! | TAAATAAGATAAGGTGCAAT+CGG | + | chr4_3:55542908-55542927 | None:intergenic | 25.0% |
| ! | CATCGCAAATAAATAAGATA+AGG | + | chr4_3:55542917-55542936 | None:intergenic | 25.0% |
| ! | CTTATTTATTTGCGATGAAT+TGG | - | chr4_3:55542920-55542939 | Msa0648940:five_prime_UTR | 25.0% |
| ! | TATTTATTTGCGATGAATTG+GGG | - | chr4_3:55542922-55542941 | Msa0648940:five_prime_UTR | 25.0% |
| AGTTTCAAATTCGATTGTGT+TGG | + | chr4_3:55536955-55536974 | None:intergenic | 30.0% | |
| !!! | AAGGGTGTTTTTGTCATTTA+TGG | + | chr4_3:55536990-55537009 | None:intergenic | 30.0% |
| !!! | AAGCAATTTTGAAACAACCA+AGG | - | chr4_3:55537097-55537116 | Msa0648940:three_prime_UTR | 30.0% |
| CAATGACATGAATTGAAAAG+AGG | + | chr4_3:55537162-55537181 | None:intergenic | 30.0% | |
| ! | ATGTTTCTGCAATTCAGATT+AGG | - | chr4_3:55537213-55537232 | Msa0648940:exon | 30.0% |
| AGCCATAAACTCTAAATTGA+TGG | + | chr4_3:55537282-55537301 | None:intergenic | 30.0% | |
| ! | AATTTAGAGTTTATGGCTGA+AGG | - | chr4_3:55537284-55537303 | Msa0648940:intron | 30.0% |
| TTATATGAAAAGGGCAATGT+TGG | - | chr4_3:55537334-55537353 | Msa0648940:intron | 30.0% | |
| TGAACTTGGAATTGTAATTC+TGG | + | chr4_3:55537395-55537414 | None:intergenic | 30.0% | |
| GAAGAAACTTCCATCTATAT+TGG | - | chr4_3:55537634-55537653 | Msa0648940:intron | 30.0% | |
| ! | TCATAATGGAGAGAAATTGA+TGG | + | chr4_3:55537696-55537715 | None:intergenic | 30.0% |
| ! | CTCTTTTGTCATATGATTTC+AGG | - | chr4_3:55537744-55537763 | Msa0648940:intron | 30.0% |
| CAGTTATTAACACCAAACAT+AGG | - | chr4_3:55537778-55537797 | Msa0648940:intron | 30.0% | |
| TAACAGAGAATTCTATCCAA+AGG | - | chr4_3:55538034-55538053 | Msa0648940:intron | 30.0% | |
| ACGGTTATGATGTTATCATA+GGG | + | chr4_3:55538126-55538145 | None:intergenic | 30.0% | |
| AACGGTTATGATGTTATCAT+AGG | + | chr4_3:55538127-55538146 | None:intergenic | 30.0% | |
| ACATTGTAAACTGTTAGCAT+TGG | - | chr4_3:55538300-55538319 | Msa0648940:intron | 30.0% | |
| ! | AGCATTGGAATAGTGTAAAA+TGG | - | chr4_3:55538315-55538334 | Msa0648940:intron | 30.0% |
| ! | GAACTTTTAGTATATGACAG+AGG | - | chr4_3:55538615-55538634 | Msa0648940:intron | 30.0% |
| !!! | ATTTTGTCTTTGTTGTTCAG+TGG | - | chr4_3:55538685-55538704 | Msa0648940:intron | 30.0% |
| GGTAGTGTACTTTATATAGT+CGG | + | chr4_3:55538771-55538790 | None:intergenic | 30.0% | |
| GAGTCATATTGACCAAATAT+TGG | + | chr4_3:55538828-55538847 | None:intergenic | 30.0% | |
| GAAAGGAAAAAAATGCTCTA+AGG | + | chr4_3:55539034-55539053 | None:intergenic | 30.0% | |
| ATACCAAACGATAACAGAAA+AGG | + | chr4_3:55539075-55539094 | None:intergenic | 30.0% | |
| ! | TTTTATGCCACTCCAAAAAA+AGG | - | chr4_3:55539347-55539366 | Msa0648940:intron | 30.0% |
| ATTTACCGAAAACTCAAAGT+TGG | + | chr4_3:55539418-55539437 | None:intergenic | 30.0% | |
| AAAAAAAAAAAGGACACAGG+TGG | + | chr4_3:55539455-55539474 | None:intergenic | 30.0% | |
| !!! | TTGAATCTTTTTTAGTGAGG+GGG | + | chr4_3:55539497-55539516 | None:intergenic | 30.0% |
| !!! | GTTGAATCTTTTTTAGTGAG+GGG | + | chr4_3:55539498-55539517 | None:intergenic | 30.0% |
| !!! | CTGTTGAATCTTTTTTAGTG+AGG | + | chr4_3:55539500-55539519 | None:intergenic | 30.0% |
| ACAATAGGTTTCATGTTGAT+TGG | + | chr4_3:55539543-55539562 | None:intergenic | 30.0% | |
| CGATTAATGTCTATCAGATT+TGG | + | chr4_3:55539606-55539625 | None:intergenic | 30.0% | |
| CCGATTATCATTAAATGTTG+AGG | - | chr4_3:55539668-55539687 | Msa0648940:intron | 30.0% | |
| ATAAACATTGTGGTTCCTAT+TGG | - | chr4_3:55539819-55539838 | Msa0648940:CDS | 30.0% | |
| GGTTCATTATGAATTCCAAT+AGG | + | chr4_3:55539837-55539856 | None:intergenic | 30.0% | |
| TGTGTGTAAAAATAAGCAAG+AGG | + | chr4_3:55539896-55539915 | None:intergenic | 30.0% | |
| ! | TAATGGACCACAATTATATC+AGG | - | chr4_3:55540040-55540059 | Msa0648940:intron | 30.0% |
| CAAGAAAAATATGAACCTGA+TGG | + | chr4_3:55540326-55540345 | None:intergenic | 30.0% | |
| ! | CATCAGGTTCATATTTTTCT+TGG | - | chr4_3:55540324-55540343 | Msa0648940:intron | 30.0% |
| !! | CAATGTTTTAGGCAAATATG+TGG | - | chr4_3:55540426-55540445 | Msa0648940:intron | 30.0% |
| TAAAGTTTCAACCCACATAA+TGG | + | chr4_3:55540487-55540506 | None:intergenic | 30.0% | |
| ! | ATGCATTGATAGAGATATTG+AGG | + | chr4_3:55540572-55540591 | None:intergenic | 30.0% |
| !!! | GGAGCAACATTTTGATTAAA+CGG | + | chr4_3:55540806-55540825 | None:intergenic | 30.0% |
| !! | TCAGTGTTTTAAATTGGAGA+AGG | - | chr4_3:55540857-55540876 | Msa0648940:intron | 30.0% |
| AATAGAGGCTAATGTTATCT+AGG | - | chr4_3:55540920-55540939 | Msa0648940:intron | 30.0% | |
| ATAGAGGCTAATGTTATCTA+GGG | - | chr4_3:55540921-55540940 | Msa0648940:intron | 30.0% | |
| CAGACAAGAAAAAAGAAAAG+CGG | + | chr4_3:55541128-55541147 | None:intergenic | 30.0% | |
| !!! | TTATTTTTTCGGTGTTTTCC+AGG | - | chr4_3:55541199-55541218 | Msa0648940:intron | 30.0% |
| ! | GTCTGCCAAAGTATATTTTA+GGG | + | chr4_3:55541305-55541324 | None:intergenic | 30.0% |
| ! | AGTCTGCCAAAGTATATTTT+AGG | + | chr4_3:55541306-55541325 | None:intergenic | 30.0% |
| TATTTGAACCTTGTATCATC+TGG | - | chr4_3:55541364-55541383 | Msa0648940:intron | 30.0% | |
| !! | TAGCTTTTAGGTATTCAGAT+TGG | + | chr4_3:55541436-55541455 | None:intergenic | 30.0% |
| ! | TAAATAAGTTTGAGGCATTC+GGG | - | chr4_3:55541456-55541475 | Msa0648940:intron | 30.0% |
| TTATCTTCATTTGAGTAGCT+AGG | + | chr4_3:55541508-55541527 | None:intergenic | 30.0% | |
| AGCTACTCAAATGAAGATAA+TGG | - | chr4_3:55541508-55541527 | Msa0648940:intron | 30.0% | |
| !!! | CTTGTTTTACATTCGTATCA+TGG | - | chr4_3:55541535-55541554 | Msa0648940:intron | 30.0% |
| TGATGAGAAACAAGAACATT+TGG | + | chr4_3:55542183-55542202 | None:intergenic | 30.0% | |
| AATGGAGGCTAATTAAAATC+AGG | - | chr4_3:55542301-55542320 | Msa0648940:CDS | 30.0% | |
| GTTTGTCAAACAATGAAATG+TGG | + | chr4_3:55542335-55542354 | None:intergenic | 30.0% | |
| ! | TGCTACTTACAAAATGCATT+GGG | + | chr4_3:55542442-55542461 | None:intergenic | 30.0% |
| ! | TTGCTACTTACAAAATGCAT+TGG | + | chr4_3:55542443-55542462 | None:intergenic | 30.0% |
| ! | CTTTTCTTAATTTTTGCTGG+TGG | - | chr4_3:55542467-55542486 | Msa0648940:intron | 30.0% |
| ! | TTTCTTAATTTTTGCTGGTG+GGG | - | chr4_3:55542469-55542488 | Msa0648940:intron | 30.0% |
| !!! | TAGTTTTTTGTTTTGAACGC+CGG | - | chr4_3:55542524-55542543 | Msa0648940:intron | 30.0% |
| ACAAATTAAGTTACCGAATC+CGG | + | chr4_3:55542546-55542565 | None:intergenic | 30.0% | |
| ATGAAATAAACACCAACTTC+GGG | + | chr4_3:55542661-55542680 | None:intergenic | 30.0% | |
| TATGGTAATTCTGATGACTT+TGG | + | chr4_3:55542775-55542794 | None:intergenic | 30.0% | |
| AAAAAAAAGCTGGGTTTGTA+TGG | + | chr4_3:55542793-55542812 | None:intergenic | 30.0% | |
| GAATTGGGGATCTTAAATTA+AGG | - | chr4_3:55542936-55542955 | Msa0648940:five_prime_UTR | 30.0% | |
| !! | GTGTTTTTGTCATTTATGGC+TGG | + | chr4_3:55536986-55537005 | None:intergenic | 35.0% |
| !! | GCAAAGATTTTGGGTGAATT+GGG | + | chr4_3:55537031-55537050 | None:intergenic | 35.0% |
| !! | TGCAAAGATTTTGGGTGAAT+TGG | + | chr4_3:55537032-55537051 | None:intergenic | 35.0% |
| ! | GGAAGGATTGCAAAGATTTT+GGG | + | chr4_3:55537040-55537059 | None:intergenic | 35.0% |
| ! | AGGAAGGATTGCAAAGATTT+TGG | + | chr4_3:55537041-55537060 | None:intergenic | 35.0% |
| TGTTTCAAAATTGCTTCGAG+AGG | + | chr4_3:55537093-55537112 | None:intergenic | 35.0% | |
| ACATGAATTGAAAAGAGGGA+AGG | + | chr4_3:55537157-55537176 | None:intergenic | 35.0% | |
| ! | TGTGTTTTGCGCTTTCAATT+TGG | - | chr4_3:55537185-55537204 | Msa0648940:three_prime_UTR | 35.0% |
| ! | CTTACAACTTTTAGTCCTTC+TGG | - | chr4_3:55537515-55537534 | Msa0648940:intron | 35.0% |
| ATTTGAACAAGCTTACCAGA+AGG | + | chr4_3:55537533-55537552 | None:intergenic | 35.0% | |
| GCTTGATCAACCAATATAGA+TGG | + | chr4_3:55537647-55537666 | None:intergenic | 35.0% | |
| CTGTATACAACACCTATGTT+TGG | + | chr4_3:55537793-55537812 | None:intergenic | 35.0% | |
| ! | CAAACATAGGTGTTGTATAC+AGG | - | chr4_3:55537791-55537810 | Msa0648940:intron | 35.0% |
| ATGCCATTGAAGTTTCTGTT+GGG | - | chr4_3:55537948-55537967 | Msa0648940:intron | 35.0% | |
| ! | TATGATGGTTTGTAAACGCA+AGG | + | chr4_3:55538067-55538086 | None:intergenic | 35.0% |
| CGTTCATCAAGTACTTATGA+TGG | + | chr4_3:55538082-55538101 | None:intergenic | 35.0% | |
| CGGTTATGATGTTATCATAG+GGG | + | chr4_3:55538125-55538144 | None:intergenic | 35.0% | |
| GTATAGAGTGGAAATAGATG+TGG | - | chr4_3:55538222-55538241 | Msa0648940:intron | 35.0% | |
| TAGTGTAAAATGTGAGCATG+AGG | - | chr4_3:55538375-55538394 | Msa0648940:intron | 35.0% | |
| ACTAAAAGTTCAAACGGCAA+TGG | + | chr4_3:55538606-55538625 | None:intergenic | 35.0% | |
| !!! | TGCTTTTTCGAACCAATACT+CGG | + | chr4_3:55538726-55538745 | None:intergenic | 35.0% |
| GAATAGGAAGAACTACATAC+AGG | + | chr4_3:55538884-55538903 | None:intergenic | 35.0% | |
| GCAATCAGAAATGAAGGAAT+AGG | + | chr4_3:55538900-55538919 | None:intergenic | 35.0% | |
| TTCCTTCATTTCTGATTGCT+TGG | - | chr4_3:55538901-55538920 | Msa0648940:intron | 35.0% | |
| TTCCAAGCAATCAGAAATGA+AGG | + | chr4_3:55538906-55538925 | None:intergenic | 35.0% | |
| CTGATTGCTTGGAATGAATT+AGG | - | chr4_3:55538912-55538931 | Msa0648940:intron | 35.0% | |
| ! | ACACATTTCCTTTTCGAACA+TGG | - | chr4_3:55538935-55538954 | Msa0648940:intron | 35.0% |
| ! | CACATTTCCTTTTCGAACAT+GGG | - | chr4_3:55538936-55538955 | Msa0648940:intron | 35.0% |
| AACAGGACTAAACAACAGAA+AGG | + | chr4_3:55539051-55539070 | None:intergenic | 35.0% | |
| ! | TTGCCTTTTCTGTTATCGTT+TGG | - | chr4_3:55539069-55539088 | Msa0648940:intron | 35.0% |
| CTGAGTAAATTCCTGCATAA+CGG | + | chr4_3:55539201-55539220 | None:intergenic | 35.0% | |
| ACGGTCAAAACATTTCTGAA+AGG | + | chr4_3:55539288-55539307 | None:intergenic | 35.0% | |
| ! | TAATGATAATCGGGGTGTTA+TGG | + | chr4_3:55539661-55539680 | None:intergenic | 35.0% |
| ! | AACAAAGTGCCTGAAATTTG+AGG | - | chr4_3:55539711-55539730 | Msa0648940:intron | 35.0% |
| TTCGAAATGCCTCAAATTTC+AGG | + | chr4_3:55539723-55539742 | None:intergenic | 35.0% | |
| ! | CATGAGTTAGTTTCATGCAA+CGG | - | chr4_3:55539775-55539794 | Msa0648940:intron | 35.0% |
| TGCATGCAGATTAGATTTAG+AGG | + | chr4_3:55539858-55539877 | None:intergenic | 35.0% | |
| GGAGGAAAATAGAAGCAAAA+AGG | + | chr4_3:55539927-55539946 | None:intergenic | 35.0% | |
| GACCACAATTATATCAGGTA+TGG | - | chr4_3:55540045-55540064 | Msa0648940:intron | 35.0% | |
| TGCCATACCTGATATAATTG+TGG | + | chr4_3:55540050-55540069 | None:intergenic | 35.0% | |
| TCTAGACAGTATTCACTCAT+TGG | - | chr4_3:55540089-55540108 | Msa0648940:intron | 35.0% | |
| TGTGTTTGATGAGTTCATAC+TGG | - | chr4_3:55540190-55540209 | Msa0648940:intron | 35.0% | |
| !! | ACTGCAGTTTTTAGAGAAAG+AGG | - | chr4_3:55540250-55540269 | Msa0648940:intron | 35.0% |
| GAGAAAGAGGAGAAAATTGA+AGG | - | chr4_3:55540263-55540282 | Msa0648940:intron | 35.0% | |
| !! | GTGCAATTTGTATTTGCTGT+AGG | - | chr4_3:55540295-55540314 | Msa0648940:intron | 35.0% |
| !! | CAATTTGTATTTGCTGTAGG+TGG | - | chr4_3:55540298-55540317 | Msa0648940:intron | 35.0% |
| CTAAGACATTTCTTGAGAAG+AGG | - | chr4_3:55540381-55540400 | Msa0648940:intron | 35.0% | |
| TTCCTTGATTGTCCAATTCT+AGG | - | chr4_3:55540597-55540616 | Msa0648940:intron | 35.0% | |
| ATCATCAAGCTCCATATCAT+CGG | + | chr4_3:55540627-55540646 | None:intergenic | 35.0% | |
| CAATATTGACACTCAAGGAA+GGG | - | chr4_3:55540660-55540679 | Msa0648940:CDS | 35.0% | |
| ! | CATTCTTAGAGTTGATTAGG+AGG | - | chr4_3:55540741-55540760 | Msa0648940:intron | 35.0% |
| ! | AAGGAAAGTTCGTCTAAGAT+TGG | - | chr4_3:55540876-55540895 | Msa0648940:intron | 35.0% |
| GTGATCTTGACATTTACCAA+AGG | - | chr4_3:55540966-55540985 | Msa0648940:intron | 35.0% | |
| ! | TAAGCTGACTTTATGTTAGC+AGG | - | chr4_3:55541010-55541029 | Msa0648940:intron | 35.0% |
| ! | AAGCTGACTTTATGTTAGCA+GGG | - | chr4_3:55541011-55541030 | Msa0648940:intron | 35.0% |
| !! | AAGGGATTAGTTTCAAAGAC+TGG | + | chr4_3:55541174-55541193 | None:intergenic | 35.0% |
| AACATTGAAATCGGCATCAT+TGG | - | chr4_3:55541246-55541265 | Msa0648940:intron | 35.0% | |
| GAAAGAAACCAGATGATACA+AGG | + | chr4_3:55541375-55541394 | None:intergenic | 35.0% | |
| GTGAAAACCACAACTGAATA+TGG | + | chr4_3:55541583-55541602 | None:intergenic | 35.0% | |
| ! | TCAAGTCAAGGTATCTAGAA+GGG | + | chr4_3:55541827-55541846 | None:intergenic | 35.0% |
| GGTATTTAATGACTGTAGAG+AGG | + | chr4_3:55541878-55541897 | None:intergenic | 35.0% | |
| ! | AATTCCCACTTGCCTAATTT+TGG | + | chr4_3:55541992-55542011 | None:intergenic | 35.0% |
| AAATTAGGCAAGTGGGAATT+AGG | - | chr4_3:55541992-55542011 | Msa0648940:intron | 35.0% | |
| AATTAGGCAAGTGGGAATTA+GGG | - | chr4_3:55541993-55542012 | Msa0648940:intron | 35.0% | |
| !! | TGCTCTATTTTAGACAAACC+TGG | - | chr4_3:55542112-55542131 | Msa0648940:intron | 35.0% |
| TGATCAATGAAGACTTGTGA+TGG | - | chr4_3:55542711-55542730 | Msa0648940:intron | 35.0% | |
| AGGTGCAATCGGATAATAAA+AGG | + | chr4_3:55542897-55542916 | None:intergenic | 35.0% | |
| !! | TCGATTGTGTTGGTTTCGTA+CGG | + | chr4_3:55536945-55536964 | None:intergenic | 40.0% |
| TTATGGCTGAAGGTTTAGAG+TGG | - | chr4_3:55537294-55537313 | Msa0648940:intron | 40.0% | |
| GTGGTAGCTTCTTCATACTT+TGG | - | chr4_3:55537885-55537904 | Msa0648940:intron | 40.0% | |
| GATGCCATTGAAGTTTCTGT+TGG | - | chr4_3:55537947-55537966 | Msa0648940:intron | 40.0% | |
| GTTCCCAACAGAAACTTCAA+TGG | + | chr4_3:55537954-55537973 | None:intergenic | 40.0% | |
| TGAAGTTTCTGTTGGGAACT+TGG | - | chr4_3:55537955-55537974 | Msa0648940:intron | 40.0% | |
| ! | ATGGTTTGTAAACGCAAGGA+GGG | + | chr4_3:55538063-55538082 | None:intergenic | 40.0% |
| ATAGGGGAGAATCAGTTTAG+GGG | + | chr4_3:55538109-55538128 | None:intergenic | 40.0% | |
| CATAGGGGAGAATCAGTTTA+GGG | + | chr4_3:55538110-55538129 | None:intergenic | 40.0% | |
| TCATAGGGGAGAATCAGTTT+AGG | + | chr4_3:55538111-55538130 | None:intergenic | 40.0% | |
| AGGTTGCTCTATCTAGGAAA+CGG | + | chr4_3:55538145-55538164 | None:intergenic | 40.0% | |
| GGAAGTGACTCAACTTAGTT+GGG | - | chr4_3:55538168-55538187 | Msa0648940:intron | 40.0% | |
| TGTAAAATGTGAGCATGAGG+TGG | - | chr4_3:55538378-55538397 | Msa0648940:intron | 40.0% | |
| CAAACGGCAATGGAAAAAGT+AGG | + | chr4_3:55538596-55538615 | None:intergenic | 40.0% | |
| !! | TCTTTGTTGTTCAGTGGCAT+GGG | - | chr4_3:55538691-55538710 | Msa0648940:intron | 40.0% |
| GGTTCGAAAAAGCAGAAAAC+AGG | - | chr4_3:55538732-55538751 | Msa0648940:intron | 40.0% | |
| CTTCCTGTTCTGCCAATATT+TGG | - | chr4_3:55538813-55538832 | Msa0648940:intron | 40.0% | |
| TGACCAAATATTGGCAGAAC+AGG | + | chr4_3:55538819-55538838 | None:intergenic | 40.0% | |
| CTAAGATCCCATGTTCGAAA+AGG | + | chr4_3:55538946-55538965 | None:intergenic | 40.0% | |
| CACTCAGAATTCATCTCACA+AGG | + | chr4_3:55538984-55539003 | None:intergenic | 40.0% | |
| GTGAGATGAATTCTGAGTGT+TGG | - | chr4_3:55538985-55539004 | Msa0648940:intron | 40.0% | |
| ACGATAACAGAAAAGGCAAC+AGG | + | chr4_3:55539068-55539087 | None:intergenic | 40.0% | |
| ATGCAGGAATTTACTCAGTC+TGG | - | chr4_3:55539203-55539222 | Msa0648940:CDS | 40.0% | |
| TGCAGGAATTTACTCAGTCT+GGG | - | chr4_3:55539204-55539223 | Msa0648940:CDS | 40.0% | |
| !! | CCTCACCAACTTTGAGTTTT+CGG | - | chr4_3:55539410-55539429 | Msa0648940:intron | 40.0% |
| !! | TTTTTAGTGAGGGGGTGATA+AGG | + | chr4_3:55539489-55539508 | None:intergenic | 40.0% |
| ! | GTTAGTTTCATGCAACGGTT+CGG | - | chr4_3:55539780-55539799 | Msa0648940:intron | 40.0% |
| ! | GTTGCTGGGTTTGATGATAA+TGG | - | chr4_3:55540023-55540042 | Msa0648940:intron | 40.0% |
| TTCTTGGAAAGCTTCTGCTA+TGG | - | chr4_3:55540340-55540359 | Msa0648940:intron | 40.0% | |
| TCTTGGAAAGCTTCTGCTAT+GGG | - | chr4_3:55540341-55540360 | Msa0648940:intron | 40.0% | |
| CACCTAGAATTGGACAATCA+AGG | + | chr4_3:55540602-55540621 | None:intergenic | 40.0% | |
| TGAGTGTCAATATTGCTGTG+TGG | + | chr4_3:55540655-55540674 | None:intergenic | 40.0% | |
| CACAGCAATATTGACACTCA+AGG | - | chr4_3:55540655-55540674 | Msa0648940:CDS | 40.0% | |
| GCAATATTGACACTCAAGGA+AGG | - | chr4_3:55540659-55540678 | Msa0648940:CDS | 40.0% | |
| ATCAAAATGTTGCTCCCTGT+CGG | - | chr4_3:55540810-55540829 | Msa0648940:intron | 40.0% | |
| CTATCATACACTATCCGACA+GGG | + | chr4_3:55540827-55540846 | None:intergenic | 40.0% | |
| !! | TTCGTCTAAGATTGGCTTCT+TGG | - | chr4_3:55540884-55540903 | Msa0648940:intron | 40.0% |
| !! | ATTTTAGAGGGACATGCCTT+TGG | + | chr4_3:55540985-55541004 | None:intergenic | 40.0% |
| TTGGTGCAGACAAAAAGTTC+AGG | - | chr4_3:55541265-55541284 | Msa0648940:intron | 40.0% | |
| CAACTGAATATGGTCTGACT+AGG | + | chr4_3:55541573-55541592 | None:intergenic | 40.0% | |
| AGTCAGACCATATTCAGTTG+TGG | - | chr4_3:55541573-55541592 | Msa0648940:intron | 40.0% | |
| TGGCAACAATAGTAGACTGT+CGG | + | chr4_3:55541640-55541659 | None:intergenic | 40.0% | |
| GCAAGTGGAGGAATATTATG+TGG | + | chr4_3:55541660-55541679 | None:intergenic | 40.0% | |
| ! | GTCAAGTCAAGGTATCTAGA+AGG | + | chr4_3:55541828-55541847 | None:intergenic | 40.0% |
| CAACAGTAGTAGTCAAGTCA+AGG | + | chr4_3:55541839-55541858 | None:intergenic | 40.0% | |
| CACTTGTGACCACCAAAATT+AGG | - | chr4_3:55541977-55541996 | Msa0648940:intron | 40.0% | |
| ACCACCAAAATTAGGCAAGT+GGG | - | chr4_3:55541985-55542004 | Msa0648940:intron | 40.0% | |
| GGGAAGTTATCCATTTGCAT+TGG | + | chr4_3:55542422-55542441 | None:intergenic | 40.0% | |
| !!! | TTTGTTTTGAACGCCGGATT+CGG | - | chr4_3:55542530-55542549 | Msa0648940:intron | 40.0% |
| CTTCATTGATCAACCCATCT+TGG | + | chr4_3:55542703-55542722 | None:intergenic | 40.0% | |
| GAGGAGATGACAATGAAGGA+AGG | + | chr4_3:55537057-55537076 | None:intergenic | 45.0% | |
| GGAAGAGGAGATGACAATGA+AGG | + | chr4_3:55537061-55537080 | None:intergenic | 45.0% | |
| !!! | GAGAGGAACTGTTTTGGAAG+AGG | + | chr4_3:55537076-55537095 | None:intergenic | 45.0% |
| ! | TGCTTCGAGAGGAACTGTTT+TGG | + | chr4_3:55537082-55537101 | None:intergenic | 45.0% |
| ! | GCTGAAGGTTTAGAGTGGAA+GGG | - | chr4_3:55537299-55537318 | Msa0648940:intron | 45.0% |
| AGTTTGTCCAGAACCAACAG+CGG | + | chr4_3:55537570-55537589 | None:intergenic | 45.0% | |
| !! | GGTTCTGGACAAACTTCTCT+CGG | - | chr4_3:55537575-55537594 | Msa0648940:intron | 45.0% |
| CTCGGTATCAAAGCTGCAAA+TGG | - | chr4_3:55537593-55537612 | Msa0648940:intron | 45.0% | |
| ! | GATGGTTTGTAAACGCAAGG+AGG | + | chr4_3:55538064-55538083 | None:intergenic | 45.0% |
| TTCCTAGATAGAGCAACCTG+AGG | - | chr4_3:55538146-55538165 | Msa0648940:intron | 45.0% | |
| TCCTAGATAGAGCAACCTGA+GGG | - | chr4_3:55538147-55538166 | Msa0648940:intron | 45.0% | |
| ! | TAAGTTGAGTCACTTCCCTC+AGG | + | chr4_3:55538165-55538184 | None:intergenic | 45.0% |
| GGGAAGTGACTCAACTTAGT+TGG | - | chr4_3:55538167-55538186 | Msa0648940:intron | 45.0% | |
| !! | GTCTTTGTTGTTCAGTGGCA+TGG | - | chr4_3:55538690-55538709 | Msa0648940:intron | 45.0% |
| CGAACCAATACTCGGAAATC+AGG | + | chr4_3:55538718-55538737 | None:intergenic | 45.0% | |
| ! | ACAAGTTGAGTGACAGGGAT+TGG | + | chr4_3:55539164-55539183 | None:intergenic | 45.0% |
| TCCCTGTCACTCAACTTGTA+AGG | - | chr4_3:55539165-55539184 | Msa0648940:CDS | 45.0% | |
| ! | CCCTTACAAGTTGAGTGACA+GGG | + | chr4_3:55539169-55539188 | None:intergenic | 45.0% |
| CCCTGTCACTCAACTTGTAA+GGG | - | chr4_3:55539166-55539185 | Msa0648940:CDS | 45.0% | |
| ! | TCCCTTACAAGTTGAGTGAC+AGG | + | chr4_3:55539170-55539189 | None:intergenic | 45.0% |
| !! | CCGAAAACTCAAAGTTGGTG+AGG | + | chr4_3:55539413-55539432 | None:intergenic | 45.0% |
| !! | TTTGTCCTGATAGTGGTGTC+CGG | - | chr4_3:55539979-55539998 | Msa0648940:intron | 45.0% |
| ACAAGCAGAGACACTCCAAA+TGG | + | chr4_3:55540005-55540024 | None:intergenic | 45.0% | |
| CCAATGAGCGAATACTGTCT+TGG | + | chr4_3:55540146-55540165 | None:intergenic | 45.0% | |
| CCAAGACAGTATTCGCTCAT+TGG | - | chr4_3:55540143-55540162 | Msa0648940:intron | 45.0% | |
| CTTGGAAAGCTTCTGCTATG+GGG | - | chr4_3:55540342-55540361 | Msa0648940:intron | 45.0% | |
| !! | AACCCACATAATGGACACAG+CGG | + | chr4_3:55540478-55540497 | None:intergenic | 45.0% |
| ATCATCGGTGCACCTAGAAT+TGG | + | chr4_3:55540612-55540631 | None:intergenic | 45.0% | |
| ! | TTCTAGGTGCACCGATGATA+TGG | - | chr4_3:55540613-55540632 | Msa0648940:intron | 45.0% |
| ATTGACACTCAAGGAAGGGT+AGG | - | chr4_3:55540664-55540683 | Msa0648940:CDS | 45.0% | |
| GCTATCATACACTATCCGAC+AGG | + | chr4_3:55540828-55540847 | None:intergenic | 45.0% | |
| !! | GGGCTTCAAGCTTGTTAGAT+TGG | - | chr4_3:55541031-55541050 | Msa0648940:intron | 45.0% |
| !!! | TTCGGTGTTTTCCAGGTTTG+AGG | - | chr4_3:55541206-55541225 | Msa0648940:intron | 45.0% |
| !! | TCGGTGTTTTCCAGGTTTGA+GGG | - | chr4_3:55541207-55541226 | Msa0648940:intron | 45.0% |
| GGCAACAATAGTAGACTGTC+GGG | + | chr4_3:55541639-55541658 | None:intergenic | 45.0% | |
| AGTATGTCACATGGTGACAG+TGG | + | chr4_3:55541695-55541714 | None:intergenic | 45.0% | |
| !! | AGATGGAGGGGTGTTACAAT+GGG | + | chr4_3:55541743-55541762 | None:intergenic | 45.0% |
| !! | AAGATGGAGGGGTGTTACAA+TGG | + | chr4_3:55541744-55541763 | None:intergenic | 45.0% |
| ! | AAGGTATCTAGAAGGGCAGT+CGG | + | chr4_3:55541820-55541839 | None:intergenic | 45.0% |
| GACCACCAAAATTAGGCAAG+TGG | - | chr4_3:55541984-55542003 | Msa0648940:intron | 45.0% | |
| ! | TCCCACTTGCCTAATTTTGG+TGG | + | chr4_3:55541989-55542008 | None:intergenic | 45.0% |
| ! | CTTAATTTTTGCTGGTGGGG+TGG | - | chr4_3:55542472-55542491 | Msa0648940:intron | 45.0% |
| CAACTTCGGGAACATAAGGA+TGG | + | chr4_3:55542648-55542667 | None:intergenic | 45.0% | |
| CATCCTTATGTTCCCGAAGT+TGG | - | chr4_3:55542646-55542665 | Msa0648940:intron | 45.0% | |
| ACACCAACTTCGGGAACATA+AGG | + | chr4_3:55542652-55542671 | None:intergenic | 45.0% | |
| ATGAAGACTTGTGATGGCAC+TGG | - | chr4_3:55542717-55542736 | Msa0648940:intron | 45.0% | |
| !!! | GAATTAAATTTTTTTATTTA+AGG | + | chr4_3:55537009-55537028 | None:intergenic | 5.0% |
| ! | GGCTGAAGGTTTAGAGTGGA+AGG | - | chr4_3:55537298-55537317 | Msa0648940:intron | 50.0% |
| GAGCATGCTTTAACCGCTGT+TGG | - | chr4_3:55537554-55537573 | Msa0648940:intron | 50.0% | |
| !! | GCTTTAACCGCTGTTGGTTC+TGG | - | chr4_3:55537560-55537579 | Msa0648940:intron | 50.0% |
| AACGCAAGGAGGGAAACCTT+TGG | + | chr4_3:55538053-55538072 | None:intergenic | 50.0% | |
| ! | TCCCTCAGGTTGCTCTATCT+AGG | + | chr4_3:55538151-55538170 | None:intergenic | 50.0% |
| GGGTCCTGATTTCCGAGTAT+TGG | - | chr4_3:55538711-55538730 | Msa0648940:intron | 50.0% | |
| ! | GAGTGTCTCTGCTTGTTGCT+GGG | - | chr4_3:55540009-55540028 | Msa0648940:intron | 50.0% |
| TTGCTGTAGGTGGATCCATC+AGG | - | chr4_3:55540308-55540327 | Msa0648940:intron | 50.0% | |
| TGTCCGCTGTGTCCATTATG+TGG | - | chr4_3:55540472-55540491 | Msa0648940:intron | 50.0% | |
| GTCCGCTGTGTCCATTATGT+GGG | - | chr4_3:55540473-55540492 | Msa0648940:intron | 50.0% | |
| TGAGATCTGTCCCTCAAACC+TGG | + | chr4_3:55541220-55541239 | None:intergenic | 50.0% | |
| ! | AGTTTGAGGCATTCGGGTAG+CGG | - | chr4_3:55541462-55541481 | Msa0648940:intron | 50.0% |
| ! | AGGGTGTTTAGTGCAAGTGG+AGG | + | chr4_3:55541672-55541691 | None:intergenic | 50.0% |
| !! | TGGAGGGTGTTTAGTGCAAG+TGG | + | chr4_3:55541675-55541694 | None:intergenic | 50.0% |
| TGTCACATGGTGACAGTGGA+GGG | + | chr4_3:55541691-55541710 | None:intergenic | 50.0% | |
| ATGTCACATGGTGACAGTGG+AGG | + | chr4_3:55541692-55541711 | None:intergenic | 50.0% | |
| CGACGATGGAGTATGTCACA+TGG | + | chr4_3:55541704-55541723 | None:intergenic | 50.0% | |
| !! | ATGGAGGGGTGTTACAATGG+GGG | + | chr4_3:55541741-55541760 | None:intergenic | 50.0% |
| !! | GATGGAGGGGTGTTACAATG+GGG | + | chr4_3:55541742-55541761 | None:intergenic | 50.0% |
| TTGACAGCAGAGAGAGTGGT+GGG | + | chr4_3:55541769-55541788 | None:intergenic | 50.0% | |
| GTACTTGACAGCAGAGAGAG+TGG | + | chr4_3:55541773-55541792 | None:intergenic | 50.0% | |
| ! | AGTGTTGAGCAAGGATGGAG+AGG | + | chr4_3:55541795-55541814 | None:intergenic | 50.0% |
| CCAGCAGCAATGATTGTGGA+CGG | + | chr4_3:55541899-55541918 | None:intergenic | 50.0% | |
| GAGTGACGACAATGGAAAGG+TGG | + | chr4_3:55541933-55541952 | None:intergenic | 50.0% | |
| CACGAGTGACGACAATGGAA+AGG | + | chr4_3:55541936-55541955 | None:intergenic | 50.0% | |
| AGGATCACGAGTGACGACAA+TGG | + | chr4_3:55541941-55541960 | None:intergenic | 50.0% | |
| !! | TTTTGGTGGTCACAAGTGCC+TGG | + | chr4_3:55541975-55541994 | None:intergenic | 50.0% |
| TAGGCAAGTGGGAATTAGGG+TGG | - | chr4_3:55541996-55542015 | Msa0648940:intron | 50.0% | |
| GTGGGAATTAGGGTGGAAAG+AGG | - | chr4_3:55542003-55542022 | Msa0648940:intron | 50.0% | |
| GGAAGTTGCTGCCGTTATGC+AGG | - | chr4_3:55539187-55539206 | Msa0648940:CDS | 55.0% | |
| AATGGCCGGACACCACTATC+AGG | + | chr4_3:55539987-55540006 | None:intergenic | 55.0% | |
| ! | GATAGTGGTGTCCGGCCATT+TGG | - | chr4_3:55539987-55540006 | Msa0648940:intron | 55.0% |
| GCAGAGACACTCCAAATGGC+CGG | + | chr4_3:55540001-55540020 | None:intergenic | 55.0% | |
| ! | GGAGTGTCTCTGCTTGTTGC+TGG | - | chr4_3:55540008-55540027 | Msa0648940:intron | 55.0% |
| ! | GTTTGAGGCATTCGGGTAGC+GGG | - | chr4_3:55541463-55541482 | Msa0648940:intron | 55.0% |
| ATACCACACGCTGACGACGA+TGG | + | chr4_3:55541718-55541737 | None:intergenic | 55.0% | |
| ! | AGTGGTGGGAGAAGATGGAG+GGG | + | chr4_3:55541755-55541774 | None:intergenic | 55.0% |
| ! | GAGTGGTGGGAGAAGATGGA+GGG | + | chr4_3:55541756-55541775 | None:intergenic | 55.0% |
| ! | AGAGTGGTGGGAGAAGATGG+AGG | + | chr4_3:55541757-55541776 | None:intergenic | 55.0% |
| ! | GAGAGAGTGGTGGGAGAAGA+TGG | + | chr4_3:55541760-55541779 | None:intergenic | 55.0% |
| CTTGACAGCAGAGAGAGTGG+TGG | + | chr4_3:55541770-55541789 | None:intergenic | 55.0% | |
| !! | CGGAGAGTGTTGAGCAAGGA+TGG | + | chr4_3:55541800-55541819 | None:intergenic | 55.0% |
| !! | CAGTCGGAGAGTGTTGAGCA+AGG | + | chr4_3:55541804-55541823 | None:intergenic | 55.0% |
| CCGTCCACAATCATTGCTGC+TGG | - | chr4_3:55541896-55541915 | Msa0648940:intron | 55.0% | |
| TGCGCCAGCAGCAATGATTG+TGG | + | chr4_3:55541903-55541922 | None:intergenic | 55.0% | |
| TGATCCTCACCATTGCCACC+AGG | - | chr4_3:55541954-55541973 | Msa0648940:intron | 55.0% | |
| TCACAAGTGCCTGGTGGCAA+TGG | + | chr4_3:55541966-55541985 | None:intergenic | 55.0% | |
| ! | TTTTGCTGGTGGGGTGGCAT+TGG | - | chr4_3:55542478-55542497 | Msa0648940:intron | 55.0% |
| TTTGCTGGTGGGGTGGCATT+GGG | - | chr4_3:55542479-55542498 | Msa0648940:intron | 55.0% | |
| !! | AGGCATTCGGGTAGCGGGTT+GGG | - | chr4_3:55541468-55541487 | Msa0648940:intron | 60.0% |
| ACTCCATCGTCGTCAGCGTG+TGG | - | chr4_3:55541712-55541731 | Msa0648940:intron | 60.0% | |
| AGTGCCTGGTGGCAATGGTG+AGG | + | chr4_3:55541961-55541980 | None:intergenic | 60.0% | |
| TGGTGGTCACAAGTGCCTGG+TGG | + | chr4_3:55541972-55541991 | None:intergenic | 60.0% | |
| AGGGTGGAAAGAGGAGACGC+AGG | - | chr4_3:55542012-55542031 | Msa0648940:intron | 60.0% | |
| TTGCTGGTGGGGTGGCATTG+GGG | - | chr4_3:55542480-55542499 | Msa0648940:intron | 60.0% | |
| !! | GAGGCATTCGGGTAGCGGGT+TGG | - | chr4_3:55541467-55541486 | Msa0648940:intron | 65.0% |
| !! | TCGGGTAGCGGGTTGGGACT+AGG | - | chr4_3:55541474-55541493 | Msa0648940:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 55536873 | 55542972 | 55536873 | ID=Msa0648940;Name=Msa0648940 |
| chr4_3 | mRNA | 55536873 | 55542972 | 55536873 | ID=Msa0648940-mRNA-1;Parent=Msa0648940;Name=Msa0648940-mRNA-1;_AED=0.10;_eAED=0.10;_QI=262|0.9|0.90|1|0.8|0.72|11|310|239 |
| chr4_3 | exon | 55536873 | 55537007 | 55536873 | ID=Msa0648940-mRNA-1:exon:14238;Parent=Msa0648940-mRNA-1 |
| chr4_3 | exon | 55537042 | 55537265 | 55537042 | ID=Msa0648940-mRNA-1:exon:14237;Parent=Msa0648940-mRNA-1 |
| chr4_3 | exon | 55538559 | 55538624 | 55538559 | ID=Msa0648940-mRNA-1:exon:14236;Parent=Msa0648940-mRNA-1 |
| chr4_3 | exon | 55539164 | 55539226 | 55539164 | ID=Msa0648940-mRNA-1:exon:14235;Parent=Msa0648940-mRNA-1 |
| chr4_3 | exon | 55539443 | 55539528 | 55539443 | ID=Msa0648940-mRNA-1:exon:14234;Parent=Msa0648940-mRNA-1 |
| chr4_3 | exon | 55539784 | 55539853 | 55539784 | ID=Msa0648940-mRNA-1:exon:14233;Parent=Msa0648940-mRNA-1 |
| chr4_3 | exon | 55540620 | 55540718 | 55540620 | ID=Msa0648940-mRNA-1:exon:14232;Parent=Msa0648940-mRNA-1 |
| chr4_3 | exon | 55541084 | 55541140 | 55541084 | ID=Msa0648940-mRNA-1:exon:14231;Parent=Msa0648940-mRNA-1 |
| chr4_3 | exon | 55542033 | 55542079 | 55542033 | ID=Msa0648940-mRNA-1:exon:14230;Parent=Msa0648940-mRNA-1 |
| chr4_3 | exon | 55542175 | 55542364 | 55542175 | ID=Msa0648940-mRNA-1:exon:14229;Parent=Msa0648940-mRNA-1 |
| chr4_3 | exon | 55542718 | 55542972 | 55542718 | ID=Msa0648940-mRNA-1:exon:14228;Parent=Msa0648940-mRNA-1 |
| chr4_3 | five_prime_UTR | 55542718 | 55542972 | 55542718 | ID=Msa0648940-mRNA-1:five_prime_utr;Parent=Msa0648940-mRNA-1 |
| chr4_3 | five_prime_UTR | 55542358 | 55542364 | 55542358 | ID=Msa0648940-mRNA-1:five_prime_utr;Parent=Msa0648940-mRNA-1 |
| chr4_3 | CDS | 55542175 | 55542357 | 55542175 | ID=Msa0648940-mRNA-1:cds;Parent=Msa0648940-mRNA-1 |
| chr4_3 | CDS | 55542033 | 55542079 | 55542033 | ID=Msa0648940-mRNA-1:cds;Parent=Msa0648940-mRNA-1 |
| chr4_3 | CDS | 55541084 | 55541140 | 55541084 | ID=Msa0648940-mRNA-1:cds;Parent=Msa0648940-mRNA-1 |
| chr4_3 | CDS | 55540620 | 55540718 | 55540620 | ID=Msa0648940-mRNA-1:cds;Parent=Msa0648940-mRNA-1 |
| chr4_3 | CDS | 55539784 | 55539853 | 55539784 | ID=Msa0648940-mRNA-1:cds;Parent=Msa0648940-mRNA-1 |
| chr4_3 | CDS | 55539443 | 55539528 | 55539443 | ID=Msa0648940-mRNA-1:cds;Parent=Msa0648940-mRNA-1 |
| chr4_3 | CDS | 55539164 | 55539226 | 55539164 | ID=Msa0648940-mRNA-1:cds;Parent=Msa0648940-mRNA-1 |
| chr4_3 | CDS | 55538559 | 55538624 | 55538559 | ID=Msa0648940-mRNA-1:cds;Parent=Msa0648940-mRNA-1 |
| chr4_3 | CDS | 55537217 | 55537265 | 55537217 | ID=Msa0648940-mRNA-1:cds;Parent=Msa0648940-mRNA-1 |
| chr4_3 | three_prime_UTR | 55537042 | 55537216 | 55537042 | ID=Msa0648940-mRNA-1:three_prime_utr;Parent=Msa0648940-mRNA-1 |
| chr4_3 | three_prime_UTR | 55536873 | 55537007 | 55536873 | ID=Msa0648940-mRNA-1:three_prime_utr;Parent=Msa0648940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
