Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979810 | XP_013451443.1 | 99.598 | 249 | 1 | 0 | 1 | 249 | 1 | 249 | 0.0 | 512 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979810 | sp|O23715|PSA3_ARATH | 86.345 | 249 | 34 | 0 | 1 | 249 | 1 | 249 | 2.58e-166 | 462 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979810 | A0A072U8Q5 | 99.598 | 249 | 1 | 0 | 1 | 249 | 1 | 249 | 0.0 | 512 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007850 | Msa0979810 | 0.820156 | 7.960501e-53 | -8.615850e-47 |
| Msa0016540 | Msa0979810 | 0.809909 | 1.498825e-50 | -8.615850e-47 |
| Msa0033880 | Msa0979810 | 0.828784 | 7.414124e-55 | -8.615850e-47 |
| Msa0039250 | Msa0979810 | 0.825468 | 4.610440e-54 | -8.615850e-47 |
| Msa0043500 | Msa0979810 | 0.806226 | 9.116010e-50 | -8.615850e-47 |
| Msa0047640 | Msa0979810 | 0.823915 | 1.070832e-53 | -8.615850e-47 |
| Msa0056270 | Msa0979810 | 0.811369 | 7.248058e-51 | -8.615850e-47 |
| Msa0069600 | Msa0979810 | 0.835046 | 2.106909e-56 | -8.615850e-47 |
| Msa0070430 | Msa0979810 | 0.813201 | 2.886201e-51 | -8.615850e-47 |
| Msa0093850 | Msa0979810 | 0.819647 | 1.040615e-52 | -8.615850e-47 |
| Msa0098470 | Msa0979810 | 0.805057 | 1.604205e-49 | -8.615850e-47 |
| Msa0108870 | Msa0979810 | 0.803683 | 3.100493e-49 | -8.615850e-47 |
| Msa0614510 | Msa0979810 | 0.808597 | 2.864883e-50 | -8.615850e-47 |
| Msa0619420 | Msa0979810 | 0.814089 | 1.840068e-51 | -8.615850e-47 |
| Msa0628420 | Msa0979810 | 0.812122 | 4.969860e-51 | -8.615850e-47 |
| Msa0644030 | Msa0979810 | 0.836067 | 1.162976e-56 | -8.615850e-47 |
| Msa0647430 | Msa0979810 | 0.819899 | 9.114590e-53 | -8.615850e-47 |
| Msa0648940 | Msa0979810 | 0.815467 | 9.108511e-52 | -8.615850e-47 |
| Msa0652690 | Msa0979810 | 0.804882 | 1.744755e-49 | -8.615850e-47 |
| Msa0654870 | Msa0979810 | 0.800426 | 1.449032e-48 | -8.615850e-47 |
| Msa0659550 | Msa0979810 | 0.835254 | 1.867716e-56 | -8.615850e-47 |
| Msa0659990 | Msa0979810 | 0.806375 | 8.481847e-50 | -8.615850e-47 |
| Msa0669180 | Msa0979810 | 0.801793 | 7.614402e-49 | -8.615850e-47 |
| Msa0687230 | Msa0979810 | 0.828847 | 7.158507e-55 | -8.615850e-47 |
| Msa0694990 | Msa0979810 | 0.806381 | 8.455961e-50 | -8.615850e-47 |
| Msa0695130 | Msa0979810 | 0.804638 | 1.962269e-49 | -8.615850e-47 |
| Msa0699780 | Msa0979810 | 0.857306 | 1.785630e-62 | -8.615850e-47 |
| Msa0705390 | Msa0979810 | 0.819064 | 1.413127e-52 | -8.615850e-47 |
| Msa0712560 | Msa0979810 | 0.807337 | 5.309876e-50 | -8.615850e-47 |
| Msa0739080 | Msa0979810 | 0.805440 | 1.333366e-49 | -8.615850e-47 |
| Msa0743530 | Msa0979810 | 0.802105 | 6.568351e-49 | -8.615850e-47 |
| Msa0744090 | Msa0979810 | 0.807995 | 3.849883e-50 | -8.615850e-47 |
| Msa0744100 | Msa0979810 | 0.819103 | 1.384517e-52 | -8.615850e-47 |
| Msa0756930 | Msa0979810 | 0.808544 | 2.940370e-50 | -8.615850e-47 |
| Msa0787150 | Msa0979810 | 0.802046 | 6.755003e-49 | -8.615850e-47 |
| Msa0788120 | Msa0979810 | 0.827408 | 1.590752e-54 | -8.615850e-47 |
| Msa0794050 | Msa0979810 | 0.801688 | 7.999993e-49 | -8.615850e-47 |
| Msa0797930 | Msa0979810 | 0.801783 | 7.650753e-49 | -8.615850e-47 |
| Msa0804250 | Msa0979810 | 0.832443 | 9.425396e-56 | -8.615850e-47 |
| Msa0819540 | Msa0979810 | 0.841031 | 6.078404e-58 | -8.615850e-47 |
| Msa0822170 | Msa0979810 | 0.812526 | 4.055753e-51 | -8.615850e-47 |
| Msa0825270 | Msa0979810 | 0.822333 | 2.505014e-53 | -8.615850e-47 |
| Msa0825280 | Msa0979810 | 0.817228 | 3.677471e-52 | -8.615850e-47 |
| Msa0126770 | Msa0979810 | 0.811600 | 6.454704e-51 | -8.615850e-47 |
| Msa0126880 | Msa0979810 | 0.812148 | 4.904287e-51 | -8.615850e-47 |
| Msa0127850 | Msa0979810 | 0.818003 | 2.458272e-52 | -8.615850e-47 |
| Msa0133720 | Msa0979810 | 0.825863 | 3.717659e-54 | -8.615850e-47 |
| Msa0133820 | Msa0979810 | 0.817481 | 3.224939e-52 | -8.615850e-47 |
| Msa0138360 | Msa0979810 | 0.824983 | 6.003883e-54 | -8.615850e-47 |
| Msa0142500 | Msa0979810 | 0.801768 | 7.705762e-49 | -8.615850e-47 |
| Msa0146080 | Msa0979810 | 0.835763 | 1.388485e-56 | -8.615850e-47 |
| Msa0147980 | Msa0979810 | 0.824988 | 5.987463e-54 | -8.615850e-47 |
| Msa0160670 | Msa0979810 | 0.803206 | 3.893758e-49 | -8.615850e-47 |
| Msa0171850 | Msa0979810 | 0.807165 | 5.776215e-50 | -8.615850e-47 |
| Msa0174000 | Msa0979810 | 0.835414 | 1.701434e-56 | -8.615850e-47 |
| Msa0180020 | Msa0979810 | 0.823044 | 1.711490e-53 | -8.615850e-47 |
| Msa0183870 | Msa0979810 | 0.800288 | 1.546279e-48 | -8.615850e-47 |
| Msa0193600 | Msa0979810 | 0.803646 | 3.156976e-49 | -8.615850e-47 |
| Msa0225670 | Msa0979810 | 0.806508 | 7.949457e-50 | -8.615850e-47 |
| Msa0231100 | Msa0979810 | 0.810136 | 1.339450e-50 | -8.615850e-47 |
| Msa0382370 | Msa0979810 | 0.809775 | 1.601299e-50 | -8.615850e-47 |
| Msa0384670 | Msa0979810 | 0.807958 | 3.919397e-50 | -8.615850e-47 |
| Msa0387880 | Msa0979810 | -0.810355 | 1.201343e-50 | -8.615850e-47 |
| Msa0392200 | Msa0979810 | 0.813535 | 2.437059e-51 | -8.615850e-47 |
| Msa0431770 | Msa0979810 | 0.802727 | 4.891314e-49 | -8.615850e-47 |
| Msa0432160 | Msa0979810 | 0.806852 | 6.725571e-50 | -8.615850e-47 |
| Msa0455380 | Msa0979810 | 0.812016 | 5.241913e-51 | -8.615850e-47 |
| Msa0476680 | Msa0979810 | 0.806391 | 8.414705e-50 | -8.615850e-47 |
| Msa0478580 | Msa0979810 | 0.802453 | 5.571517e-49 | -8.615850e-47 |
| Msa0480780 | Msa0979810 | 0.810866 | 9.314420e-51 | -8.615850e-47 |
| Msa0979810 | Msa0980940 | 0.804899 | 1.731062e-49 | -8.615850e-47 |
| Msa0979810 | Msa1025940 | 0.806013 | 1.011038e-49 | -8.615850e-47 |
| Msa0979810 | Msa1059960 | 0.802682 | 4.996077e-49 | -8.615850e-47 |
| Msa0979810 | Msa1070390 | 0.837584 | 4.768096e-57 | -8.615850e-47 |
| Msa0979810 | Msa1072600 | 0.828116 | 1.075221e-54 | -8.615850e-47 |
| Msa0979810 | Msa1076560 | 0.831143 | 1.972331e-55 | -8.615850e-47 |
| Msa0979810 | Msa1083880 | 0.808264 | 3.373850e-50 | -8.615850e-47 |
| Msa0979810 | Msa1105160 | 0.800802 | 1.214913e-48 | -8.615850e-47 |
| Msa0979810 | Msa1123350 | 0.836743 | 7.825229e-57 | -8.615850e-47 |
| Msa0979810 | Msa1127430 | 0.813628 | 2.324675e-51 | -8.615850e-47 |
| Msa0979810 | Msa1127540 | 0.814450 | 1.531040e-51 | -8.615850e-47 |
| Msa0979810 | Msa1127590 | 0.814871 | 1.235323e-51 | -8.615850e-47 |
| Msa0979810 | Msa1131560 | 0.805346 | 1.395557e-49 | -8.615850e-47 |
| Msa0979810 | Msa1154490 | 0.834142 | 3.555809e-56 | -8.615850e-47 |
| Msa0979810 | Msa1158230 | 0.816510 | 5.329264e-52 | -8.615850e-47 |
| Msa0979810 | Msa1169720 | 0.808558 | 2.920412e-50 | -8.615850e-47 |
| Msa0979810 | Msa1176980 | 0.806202 | 9.222409e-50 | -8.615850e-47 |
| Msa0979810 | Msa1188560 | 0.833005 | 6.836874e-56 | -8.615850e-47 |
| Msa0979810 | Msa1198530 | 0.836427 | 9.418040e-57 | -8.615850e-47 |
| Msa0979810 | Msa1201810 | 0.835631 | 1.499259e-56 | -8.615850e-47 |
| Msa0979810 | Msa1201830 | 0.815978 | 7.007156e-52 | -8.615850e-47 |
| Msa0979810 | Msa1205480 | 0.825204 | 5.325515e-54 | -8.615850e-47 |
| Msa0979810 | Msa1206650 | 0.818024 | 2.432627e-52 | -8.615850e-47 |
| Msa0979810 | Msa1213810 | 0.801002 | 1.105715e-48 | -8.615850e-47 |
| Msa0979810 | Msa1214320 | 0.807395 | 5.161796e-50 | -8.615850e-47 |
| Msa0979810 | Msa1219000 | 0.811131 | 8.161154e-51 | -8.615850e-47 |
| Msa0979810 | Msa1223330 | 0.806636 | 7.472949e-50 | -8.615850e-47 |
| Msa0979810 | Msa1265590 | 0.810704 | 1.009963e-50 | -8.615850e-47 |
| Msa0979810 | Msa1294840 | 0.813123 | 3.001337e-51 | -8.615850e-47 |
| Msa0979810 | Msa1329450 | 0.848225 | 7.017234e-60 | -8.615850e-47 |
| Msa0979810 | Msa1333970 | 0.808425 | 3.116510e-50 | -8.615850e-47 |
| Msa0979810 | Msa1336040 | 0.800610 | 1.329238e-48 | -8.615850e-47 |
| Msa0979810 | Msa1356610 | 0.807622 | 4.620561e-50 | -8.615850e-47 |
| Msa0979810 | Msa1359560 | 0.801068 | 1.072152e-48 | -8.615850e-47 |
| Msa0979810 | Msa1371520 | 0.811564 | 6.573790e-51 | -8.615850e-47 |
| Msa0979810 | Msa1373820 | 0.806099 | 9.695857e-50 | -8.615850e-47 |
| Msa0979810 | Msa1380970 | 0.815908 | 7.264643e-52 | -8.615850e-47 |
| Msa0979810 | Msa1385810 | 0.800846 | 1.189996e-48 | -8.615850e-47 |
| Msa0979810 | Msa1409260 | 0.812214 | 4.745571e-51 | -8.615850e-47 |
| Msa0979810 | Msa1409950 | 0.803550 | 3.304257e-49 | -8.615850e-47 |
| Msa0979810 | Msa1411500 | 0.806255 | 8.988832e-50 | -8.615850e-47 |
| Msa0979810 | Msa1411950 | 0.828109 | 1.078983e-54 | -8.615850e-47 |
| Msa0979810 | Msa1418240 | 0.831878 | 1.300642e-55 | -8.615850e-47 |
| Msa0979810 | Msa1427560 | 0.816505 | 5.343126e-52 | -8.615850e-47 |
| Msa0979810 | Msa1438050 | 0.809981 | 1.446383e-50 | -8.615850e-47 |
| Msa0979810 | Msa1450720 | 0.805034 | 1.622322e-49 | -8.615850e-47 |
| Msa0979810 | Msa1461540 | 0.835429 | 1.686895e-56 | -8.615850e-47 |
| Msa0241830 | Msa0979810 | 0.840788 | 7.039897e-58 | -8.615850e-47 |
| Msa0245580 | Msa0979810 | 0.801130 | 1.040829e-48 | -8.615850e-47 |
| Msa0247060 | Msa0979810 | 0.818954 | 1.496575e-52 | -8.615850e-47 |
| Msa0259160 | Msa0979810 | 0.823278 | 1.509584e-53 | -8.615850e-47 |
| Msa0262480 | Msa0979810 | 0.830056 | 3.639589e-55 | -8.615850e-47 |
| Msa0273650 | Msa0979810 | 0.802925 | 4.450797e-49 | -8.615850e-47 |
| Msa0279850 | Msa0979810 | 0.802124 | 6.509848e-49 | -8.615850e-47 |
| Msa0296250 | Msa0979810 | 0.812801 | 3.531840e-51 | -8.615850e-47 |
| Msa0322900 | Msa0979810 | 0.844740 | 6.267588e-59 | -8.615850e-47 |
| Msa0341690 | Msa0979810 | 0.808487 | 3.023429e-50 | -8.615850e-47 |
| Msa0346990 | Msa0979810 | 0.818215 | 2.202237e-52 | -8.615850e-47 |
| Msa0485240 | Msa0979810 | 0.822565 | 2.212939e-53 | -8.615850e-47 |
| Msa0510290 | Msa0979810 | 0.827987 | 1.154592e-54 | -8.615850e-47 |
| Msa0518030 | Msa0979810 | 0.810908 | 9.123439e-51 | -8.615850e-47 |
| Msa0521010 | Msa0979810 | 0.800045 | 1.732722e-48 | -8.615850e-47 |
| Msa0527190 | Msa0979810 | 0.817136 | 3.856765e-52 | -8.615850e-47 |
| Msa0531250 | Msa0979810 | 0.817856 | 2.654101e-52 | -8.615850e-47 |
| Msa0547990 | Msa0979810 | 0.828342 | 9.480940e-55 | -8.615850e-47 |
| Msa0556010 | Msa0979810 | 0.807847 | 4.138017e-50 | -8.615850e-47 |
| Msa0581970 | Msa0979810 | 0.803828 | 2.893074e-49 | -8.615850e-47 |
| Msa0583500 | Msa0979810 | 0.835429 | 1.686535e-56 | -8.615850e-47 |
| Msa0585070 | Msa0979810 | 0.811472 | 6.883254e-51 | -8.615850e-47 |
| Msa0593700 | Msa0979810 | 0.806367 | 8.513014e-50 | -8.615850e-47 |
| Msa0851470 | Msa0979810 | 0.812177 | 4.833449e-51 | -8.615850e-47 |
| Msa0888940 | Msa0979810 | 0.831971 | 1.233512e-55 | -8.615850e-47 |
| Msa0897400 | Msa0979810 | 0.830980 | 2.163622e-55 | -8.615850e-47 |
| Msa0903780 | Msa0979810 | 0.827983 | 1.157249e-54 | -8.615850e-47 |
| Msa0928120 | Msa0979810 | 0.802608 | 5.175576e-49 | -8.615850e-47 |
| Msa0943170 | Msa0979810 | 0.837860 | 4.050801e-57 | -8.615850e-47 |
| Msa0945240 | Msa0979810 | 0.810294 | 1.238201e-50 | -8.615850e-47 |
| Msa0963020 | Msa0979810 | 0.841137 | 5.702879e-58 | -8.615850e-47 |
| Msa0968440 | Msa0979810 | 0.812173 | 4.842631e-51 | -8.615850e-47 |
| Msa0969330 | Msa0979810 | 0.809141 | 2.191416e-50 | -8.615850e-47 |
| Msa0970320 | Msa0979810 | 0.838933 | 2.141979e-57 | -8.615850e-47 |
| Msa0973320 | Msa0979810 | 0.816828 | 4.521065e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979810 | MtrunA17_Chr6g0459741 | 99.598 | 249 | 1 | 0 | 1 | 249 | 1 | 249 | 0.0 | 512 |
| Msa0979810 | MtrunA17_Chr0c02g0489661 | 36.612 | 183 | 116 | 0 | 8 | 190 | 6 | 188 | 3.75e-39 | 135 |
| Msa0979810 | MtrunA17_Chr1g0155371 | 40.838 | 191 | 108 | 3 | 8 | 196 | 6 | 193 | 8.89e-39 | 136 |
| Msa0979810 | MtrunA17_Chr1g0210811 | 34.783 | 207 | 120 | 2 | 6 | 203 | 6 | 206 | 3.83e-38 | 133 |
| Msa0979810 | MtrunA17_Chr7g0243311 | 35.071 | 211 | 135 | 2 | 8 | 216 | 5 | 215 | 8.21e-38 | 132 |
| Msa0979810 | MtrunA17_Chr5g0401801 | 37.500 | 192 | 117 | 3 | 8 | 197 | 5 | 195 | 3.00e-37 | 130 |
| Msa0979810 | MtrunA17_Chr8g0360781 | 36.932 | 176 | 109 | 2 | 5 | 178 | 6 | 181 | 1.98e-32 | 119 |
| Msa0979810 | MtrunA17_Chr2g0308541 | 35.227 | 176 | 112 | 2 | 5 | 178 | 6 | 181 | 2.37e-32 | 118 |
| Msa0979810 | MtrunA17_Chr8g0371571 | 35.260 | 173 | 110 | 1 | 8 | 178 | 4 | 176 | 1.21e-29 | 111 |
| Msa0979810 | MtrunA17_Chr2g0283841 | 35.260 | 173 | 110 | 1 | 8 | 178 | 4 | 176 | 3.76e-28 | 107 |
| Msa0979810 | MtrunA17_Chr6g0459771 | 88.462 | 52 | 6 | 0 | 176 | 227 | 22 | 73 | 2.45e-27 | 100 |
| Msa0979810 | MtrunA17_Chr4g0004521 | 33.540 | 161 | 99 | 4 | 38 | 196 | 34 | 188 | 4.16e-19 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979810 | AT2G27020.1 | 86.345 | 249 | 34 | 0 | 1 | 249 | 1 | 249 | 2.62e-167 | 462 |
| Msa0979810 | AT2G27020.2 | 86.345 | 249 | 34 | 0 | 1 | 249 | 103 | 351 | 7.58e-166 | 462 |
| Msa0979810 | AT1G47250.1 | 42.105 | 171 | 97 | 1 | 8 | 178 | 6 | 174 | 6.21e-39 | 137 |
| Msa0979810 | AT1G16470.1 | 34.146 | 205 | 134 | 1 | 8 | 211 | 6 | 210 | 6.49e-39 | 135 |
| Msa0979810 | AT1G16470.2 | 34.146 | 205 | 134 | 1 | 8 | 211 | 6 | 210 | 6.49e-39 | 135 |
| Msa0979810 | AT1G79210.1 | 34.146 | 205 | 134 | 1 | 8 | 211 | 6 | 210 | 8.57e-39 | 135 |
| Msa0979810 | AT1G79210.2 | 34.146 | 205 | 134 | 1 | 8 | 211 | 6 | 210 | 8.57e-39 | 135 |
| Msa0979810 | AT1G79210.3 | 34.146 | 205 | 134 | 1 | 8 | 211 | 6 | 210 | 8.57e-39 | 135 |
| Msa0979810 | AT5G42790.1 | 42.105 | 171 | 97 | 1 | 8 | 178 | 6 | 174 | 1.02e-38 | 136 |
| Msa0979810 | AT3G14290.1 | 34.783 | 207 | 120 | 2 | 6 | 203 | 6 | 206 | 3.96e-38 | 133 |
| Msa0979810 | AT1G53850.1 | 34.300 | 207 | 121 | 2 | 6 | 203 | 6 | 206 | 8.55e-38 | 132 |
| Msa0979810 | AT1G53850.2 | 34.300 | 207 | 121 | 2 | 6 | 203 | 6 | 206 | 8.55e-38 | 132 |
| Msa0979810 | AT3G22110.1 | 34.783 | 230 | 143 | 5 | 8 | 231 | 5 | 233 | 2.99e-37 | 131 |
| Msa0979810 | AT5G35590.1 | 34.659 | 176 | 113 | 2 | 5 | 178 | 6 | 181 | 1.55e-32 | 119 |
| Msa0979810 | AT2G05840.2 | 35.795 | 176 | 111 | 2 | 5 | 178 | 6 | 181 | 1.44e-31 | 116 |
| Msa0979810 | AT2G05840.1 | 35.795 | 176 | 111 | 2 | 5 | 178 | 6 | 181 | 2.04e-31 | 116 |
| Msa0979810 | AT2G05840.3 | 35.795 | 176 | 111 | 2 | 5 | 178 | 6 | 181 | 2.11e-31 | 115 |
| Msa0979810 | AT5G66140.1 | 34.104 | 173 | 112 | 1 | 8 | 178 | 4 | 176 | 1.29e-28 | 109 |
| Msa0979810 | AT3G51260.1 | 34.104 | 173 | 112 | 1 | 8 | 178 | 4 | 176 | 1.44e-28 | 109 |
| Msa0979810 | AT3G51260.2 | 34.104 | 173 | 112 | 1 | 8 | 178 | 4 | 176 | 2.55e-28 | 108 |
| Msa0979810 | AT4G15165.1 | 30.144 | 209 | 102 | 5 | 8 | 214 | 5 | 171 | 2.30e-20 | 86.3 |
Find 83 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTCATAGGCTTCAAAATT+TGG | 0.121626 | 6_4:-17135345 | Msa0979810:three_prime_UTR |
| CTTTGTTGCAGGACTGTTAT+TGG | 0.185948 | 6_4:-17138613 | Msa0979810:intron |
| CATTTGTTTCAGAGGTATTT+TGG | 0.204212 | 6_4:-17137158 | Msa0979810:intron |
| CCTTCGAAAATGATGCTTTC+GGG | 0.215701 | 6_4:-17138447 | Msa0979810:CDS |
| CAAGTTATGAAACGCATCTT+TGG | 0.264776 | 6_4:+17135398 | None:intergenic |
| TAATCTTGCTGCAGACCTTT+TGG | 0.265690 | 6_4:-17137365 | Msa0979810:intron |
| TCCACTTGTCCGCGGCATTA+TGG | 0.286011 | 6_4:-17135199 | Msa0979810:three_prime_UTR |
| GCAAGTTCCTTGACAGGAAT+TGG | 0.290742 | 6_4:+17137516 | None:intergenic |
| CGCGGCATTATGGCAACATT+TGG | 0.314133 | 6_4:-17135189 | Msa0979810:three_prime_UTR |
| ATGCAAGGATGGAATTGTTT+TGG | 0.316941 | 6_4:-17138584 | Msa0979810:intron |
| CCCTTCGAAAATGATGCTTT+CGG | 0.324696 | 6_4:-17138448 | Msa0979810:CDS |
| TGTGCAGAGGTGCACGTAAC+TGG | 0.359168 | 6_4:+17137482 | None:intergenic |
| TTTGTTGCAGGACTGTTATT+GGG | 0.360861 | 6_4:-17138612 | Msa0979810:intron |
| GCCAAAGCTGTCGACAATAG+TGG | 0.361107 | 6_4:-17139455 | Msa0979810:CDS |
| ATCTGGAAAACGCGACCATC+AGG | 0.383550 | 6_4:+17139488 | None:intergenic |
| AACGGCGTGAATTCTTCTAT+TGG | 0.385310 | 6_4:+17138422 | None:intergenic |
| AGCTAATTTAGCTGCTGTCT+TGG | 0.388328 | 6_4:+17135464 | None:intergenic |
| TGCACCTCTGCACATTATAC+TGG | 0.388962 | 6_4:-17137473 | Msa0979810:CDS |
| TTGTACATGGTCGAACCTTC+TGG | 0.390091 | 6_4:-17137299 | Msa0979810:CDS |
| TAAATTAGCTCTTGAAGAAA+TGG | 0.390363 | 6_4:-17135451 | Msa0979810:CDS |
| AAGTTATGAAACGCATCTTT+GGG | 0.393469 | 6_4:+17135399 | None:intergenic |
| CTTTGGCAGCGTATTCGATC+TGG | 0.397223 | 6_4:+17139471 | None:intergenic |
| TTGTGCAAATGCAGTATATA+TGG | 0.408846 | 6_4:-17135925 | Msa0979810:intron |
| AGATAAAATAAAGACATGTT+TGG | 0.417651 | 6_4:+17135144 | None:intergenic |
| CCCACTATTGTCGACAGCTT+TGG | 0.424001 | 6_4:+17139454 | None:intergenic |
| TTTGGATGTGGTGTCATACT+AGG | 0.432245 | 6_4:-17137347 | Msa0979810:CDS |
| GCTTCTTCTAGAAGCTCCTC+TGG | 0.439481 | 6_4:+17135486 | None:intergenic |
| AACTTGTAACAGAGAGCATT+GGG | 0.455467 | 6_4:-17135381 | Msa0979810:three_prime_UTR |
| CTTGTTGATTTCTGTTGCTG+TGG | 0.462822 | 6_4:-17135292 | Msa0979810:three_prime_UTR |
| TTCAATAACACCTTGTCGGC+AGG | 0.462897 | 6_4:+17136043 | None:intergenic |
| AACATAGGATTGGAAGCATT+AGG | 0.468604 | 6_4:-17135094 | Msa0979810:three_prime_UTR |
| TTGATTTCTTCGATTTCGAT+TGG | 0.469328 | 6_4:+17139570 | None:intergenic |
| CACGCCGTTCATCGCCACTC+TGG | 0.470804 | 6_4:-17138408 | Msa0979810:CDS |
| CTACTTCAATAACACCTTGT+CGG | 0.474090 | 6_4:+17136039 | None:intergenic |
| CCTGTCGTAGTTAGTTGCTT+CGG | 0.482274 | 6_4:+17137739 | None:intergenic |
| ATGGAAGGCAAATTGTTGCC+AGG | 0.483133 | 6_4:-17137769 | Msa0979810:CDS |
| ATTTCGAACTCGAAATGAGC+TGG | 0.484940 | 6_4:-17135876 | Msa0979810:CDS |
| ATCATGAGTAGCATTGGAAC+AGG | 0.485653 | 6_4:-17139539 | Msa0979810:CDS |
| ATCAAACCGTCAACATGAAA+AGG | 0.490739 | 6_4:-17135842 | Msa0979810:intron |
| TCAGCAATCATGAGTAGCAT+TGG | 0.498196 | 6_4:-17139545 | Msa0979810:exon |
| TGCAATCGGGAAGGGCAGAC+AGG | 0.508389 | 6_4:-17137132 | Msa0979810:CDS |
| AGTTGCTTCGGACTTAGCCC+TGG | 0.513490 | 6_4:+17137751 | None:intergenic |
| TAACTTGTAACAGAGAGCAT+TGG | 0.518761 | 6_4:-17135382 | Msa0979810:three_prime_UTR |
| CGATCAGCAAGTTCCTTGAC+AGG | 0.529831 | 6_4:+17137510 | None:intergenic |
| GCACATTATACTGGTGGCTC+AGG | 0.538022 | 6_4:-17137464 | Msa0979810:intron |
| CCGAAGCAACTAACTACGAC+AGG | 0.544505 | 6_4:-17137739 | Msa0979810:intron |
| AACATCTATAGAAATCTCAT+AGG | 0.544772 | 6_4:-17135358 | Msa0979810:three_prime_UTR |
| GTCACTACCTTCTCTCCTGA+TGG | 0.550547 | 6_4:-17139503 | Msa0979810:CDS |
| GCCATAATGCCGCGGACAAG+TGG | 0.551469 | 6_4:+17135198 | None:intergenic |
| CAGGACTAGCTGCAGATGGA+AGG | 0.557444 | 6_4:-17137784 | Msa0979810:CDS |
| AGTATGACACCACATCCAAA+AGG | 0.565132 | 6_4:+17137350 | None:intergenic |
| CCAAAGCTGTCGACAATAGT+GGG | 0.566060 | 6_4:-17139454 | Msa0979810:intron |
| TTTGGTGCTGCAATCGGGAA+GGG | 0.566694 | 6_4:-17137140 | Msa0979810:CDS |
| GTAGCAGGACTAGCTGCAGA+TGG | 0.578661 | 6_4:-17137788 | Msa0979810:CDS |
| TGGAGTTCATGACGAGGCAA+AGG | 0.579021 | 6_4:-17135905 | Msa0979810:CDS |
| CGTTCATCGCCACTCTGGAA+TGG | 0.579273 | 6_4:-17138403 | Msa0979810:intron |
| CATTCCAGAGTGGCGATGAA+CGG | 0.580559 | 6_4:+17138404 | None:intergenic |
| AGATGGACCACAGTTGTACA+TGG | 0.581771 | 6_4:-17137312 | Msa0979810:CDS |
| AACACTAAATCAAATTGATG+AGG | 0.583604 | 6_4:+17135239 | None:intergenic |
| TGGTGATCCAATTCCTGTCA+AGG | 0.583937 | 6_4:-17137523 | Msa0979810:CDS |
| TGGAAGGCAAATTGTTGCCA+GGG | 0.588037 | 6_4:-17137768 | Msa0979810:CDS |
| GATTGAAAAGTTGAAGCTTG+CGG | 0.589401 | 6_4:-17136072 | Msa0979810:CDS |
| ACCTCTGCACATTATACTGG+TGG | 0.589474 | 6_4:-17137470 | Msa0979810:CDS |
| TGGTCTTCTCCACTTGTCCG+CGG | 0.589546 | 6_4:-17135207 | Msa0979810:three_prime_UTR |
| ACACTAAATCAAATTGATGA+GGG | 0.593010 | 6_4:+17135240 | None:intergenic |
| GCGGATATGACCTGCCGACA+AGG | 0.596010 | 6_4:-17136053 | Msa0979810:CDS |
| ATTGGGATCAGATGCAAGGA+TGG | 0.596379 | 6_4:-17138595 | Msa0979810:CDS |
| TAATCTTGTGCAGGTTCCAG+AGG | 0.597205 | 6_4:-17135502 | Msa0979810:intron |
| AACGCGACCATCAGGAGAGA+AGG | 0.597581 | 6_4:+17139496 | None:intergenic |
| CAAGGAACTTGCTGATCGCG+TGG | 0.607658 | 6_4:-17137505 | Msa0979810:CDS |
| CACAGCAACAGAAATCAACA+AGG | 0.611749 | 6_4:+17135293 | None:intergenic |
| TTTCGAACTCGAAATGAGCT+GGG | 0.612900 | 6_4:-17135875 | Msa0979810:CDS |
| CTAGGTGGTTACGACAGAGA+TGG | 0.638286 | 6_4:-17137329 | Msa0979810:CDS |
| TGTTATTGGGATCAGATGCA+AGG | 0.646757 | 6_4:-17138599 | Msa0979810:CDS |
| GGATGTGGTGTCATACTAGG+TGG | 0.653371 | 6_4:-17137344 | Msa0979810:CDS |
| CTCACATAAGAGACACCAGA+AGG | 0.679277 | 6_4:+17137284 | None:intergenic |
| GCCACCAGTATAATGTGCAG+AGG | 0.679994 | 6_4:+17137469 | None:intergenic |
| CAAATGTTGCCATAATGCCG+CGG | 0.696936 | 6_4:+17135190 | None:intergenic |
| GGAATTGTGGAAATGAGTTG+AGG | 0.703572 | 6_4:+17135071 | None:intergenic |
| GGTTCGACCATGTACAACTG+TGG | 0.719686 | 6_4:+17137305 | None:intergenic |
| AACAAAGTACCATTCCAGAG+TGG | 0.731365 | 6_4:+17138394 | None:intergenic |
| ACAGCAACAGAAATCAACAA+GGG | 0.731830 | 6_4:+17135294 | None:intergenic |
| TATATATGGAGTTCATGACG+AGG | 0.744573 | 6_4:-17135911 | Msa0979810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAATTGAATTTTTTATTTTT+AGG | - | chr6_4:17135388-17135407 | Msa0979810:three_prime_UTR | 10.0% |
| !! | AAAAAAATCAAAAATTAAAC+AGG | + | chr6_4:17136189-17136208 | None:intergenic | 10.0% |
| !! | TTATCAAATTATCAAAATAA+AGG | + | chr6_4:17137034-17137053 | None:intergenic | 10.0% |
| !!! | ATAATTTTATTTGTTTAACT+CGG | - | chr6_4:17138140-17138159 | Msa0979810:intron | 10.0% |
| !!! | TTCTTTTAATTACTTATATA+TGG | - | chr6_4:17138933-17138952 | Msa0979810:intron | 10.0% |
| !!! | ATTTTTTGTGATGTTAATAA+TGG | - | chr6_4:17135325-17135344 | Msa0979810:three_prime_UTR | 15.0% |
| !!! | TTTTTTGTGATGTTAATAAT+GGG | - | chr6_4:17135326-17135345 | Msa0979810:three_prime_UTR | 15.0% |
| !!! | AGTTTTTTATTTTAGGTTTA+AGG | - | chr6_4:17135909-17135928 | Msa0979810:CDS | 15.0% |
| !!! | TGAAATGTAGTTTTATTTTA+AGG | - | chr6_4:17136027-17136046 | Msa0979810:intron | 15.0% |
| !!! | TTTATTTTAAGGTTTTTGTT+TGG | - | chr6_4:17136038-17136057 | Msa0979810:CDS | 15.0% |
| !! | ATATTATTTAAAGAAAGCAA+AGG | + | chr6_4:17137726-17137745 | None:intergenic | 15.0% |
| !! | TAATAAGCATATTACATATA+AGG | + | chr6_4:17137920-17137939 | None:intergenic | 15.0% |
| !! | CGATAAATATAAAAAAATAC+TGG | - | chr6_4:17138208-17138227 | Msa0979810:intron | 15.0% |
| !!! | GGTTTTGTTATTTTAAGATT+TGG | - | chr6_4:17135878-17135897 | Msa0979810:CDS | 20.0% |
| !!! | ACTTTTTTAGATACTAGTTA+TGG | - | chr6_4:17135966-17135985 | Msa0979810:intron | 20.0% |
| !!! | CTTTTTTAGATACTAGTTAT+GGG | - | chr6_4:17135967-17135986 | Msa0979810:intron | 20.0% |
| !!! | AGATTGTTATTCTGATAATT+TGG | - | chr6_4:17136157-17136176 | Msa0979810:intron | 20.0% |
| !!! | GATTGTTATTCTGATAATTT+GGG | - | chr6_4:17136158-17136177 | Msa0979810:intron | 20.0% |
| !!! | ATTGTTATTCTGATAATTTG+GGG | - | chr6_4:17136159-17136178 | Msa0979810:intron | 20.0% |
| !!! | TGTTAATTTTTGTGCAAATT+TGG | - | chr6_4:17136209-17136228 | Msa0979810:intron | 20.0% |
| !! | CATTCTATATAATATGTAGT+AGG | + | chr6_4:17136626-17136645 | None:intergenic | 20.0% |
| !!! | TATTAGAAAAGTATCAACAA+TGG | + | chr6_4:17136773-17136792 | None:intergenic | 20.0% |
| !!! | ACAAATCTTTTTCCAATTTT+AGG | - | chr6_4:17136894-17136913 | Msa0979810:intron | 20.0% |
| !! | TCAAATTATCAAAATAAAGG+AGG | + | chr6_4:17137031-17137050 | None:intergenic | 20.0% |
| !! | ATCAGTAAAAAAAAATCACA+TGG | + | chr6_4:17137516-17137535 | None:intergenic | 20.0% |
| !!! | TCTAAAATGAACAATAATTG+TGG | - | chr6_4:17137643-17137662 | Msa0979810:intron | 20.0% |
| !! | AAACATAGACAGTAATTAAA+AGG | + | chr6_4:17137672-17137691 | None:intergenic | 20.0% |
| !!! | TTTTAATTACTGTCTATGTT+TGG | - | chr6_4:17137671-17137690 | Msa0979810:intron | 20.0% |
| !! | TTTAATTACTGTCTATGTTT+GGG | - | chr6_4:17137672-17137691 | Msa0979810:intron | 20.0% |
| !!! | TAGCTTATATGTTACTTTAA+AGG | - | chr6_4:17137866-17137885 | Msa0979810:intron | 20.0% |
| !! | ATGTAATATGCTTATTAGAA+TGG | - | chr6_4:17137923-17137942 | Msa0979810:intron | 20.0% |
| !! | AATTAAATATAACTCTTCTG+TGG | - | chr6_4:17138526-17138545 | Msa0979810:intron | 20.0% |
| !! | TGTAAAACAAAATTCTGATA+TGG | + | chr6_4:17138586-17138605 | None:intergenic | 20.0% |
| !! | GATATATAATGAAACAAATG+TGG | + | chr6_4:17138978-17138997 | None:intergenic | 20.0% |
| !!! | GGTTCATATTTTTATGTTTA+TGG | - | chr6_4:17139083-17139102 | Msa0979810:intron | 20.0% |
| !!! | GATTTAGTGTTTCATTTTAT+TGG | - | chr6_4:17139480-17139499 | Msa0979810:CDS | 20.0% |
| !! | AGATAAAATAAAGACATGTT+TGG | + | chr6_4:17139566-17139585 | None:intergenic | 20.0% |
| !!! | CATTTTCATTTTTCAAACAT+AGG | - | chr6_4:17139598-17139617 | Msa0979810:five_prime_UTR | 20.0% |
| !!! | TGTTTTTGGATTTGGAATTA+TGG | - | chr6_4:17135356-17135375 | Msa0979810:three_prime_UTR | 25.0% |
| !!! | GTTTTTGGATTTGGAATTAT+GGG | - | chr6_4:17135357-17135376 | Msa0979810:three_prime_UTR | 25.0% |
| !!! | TAATGGGTTTTGTTTCTTTT+AGG | - | chr6_4:17135476-17135495 | Msa0979810:CDS | 25.0% |
| !!! | GTTTTGTTTCTTTTAGGAAT+TGG | - | chr6_4:17135482-17135501 | Msa0979810:CDS | 25.0% |
| !! | GTTTCTCTTATAGATTTTCT+AGG | + | chr6_4:17135690-17135709 | None:intergenic | 25.0% |
| ! | AAATCTATAAGAGAAACTGT+TGG | - | chr6_4:17135693-17135712 | Msa0979810:intron | 25.0% |
| ! | AATCTATAAGAGAAACTGTT+GGG | - | chr6_4:17135694-17135713 | Msa0979810:intron | 25.0% |
| ! | AGATTTGGAAATTAATGTGT+TGG | - | chr6_4:17135719-17135738 | Msa0979810:intron | 25.0% |
| ! | TTCTATCATTCACCAAATTT+CGG | + | chr6_4:17135746-17135765 | None:intergenic | 25.0% |
| ! | ATGTTCTGTAATATGCATTA+TGG | - | chr6_4:17135856-17135875 | Msa0979810:CDS | 25.0% |
| ! | TGTTCTGTAATATGCATTAT+GGG | - | chr6_4:17135857-17135876 | Msa0979810:CDS | 25.0% |
| !!! | AACCTGCAGTTTTTTATTTT+AGG | - | chr6_4:17135902-17135921 | Msa0979810:CDS | 25.0% |
| ! | AACCTAAAATAAAAAACTGC+AGG | + | chr6_4:17135907-17135926 | None:intergenic | 25.0% |
| !! | TTGTTTGAGATTTGAAAGTA+AGG | - | chr6_4:17135997-17136016 | Msa0979810:intron | 25.0% |
| !! | TGTTTGAGATTTGAAAGTAA+GGG | - | chr6_4:17135998-17136017 | Msa0979810:intron | 25.0% |
| !! | TTGTTATTCTGATAATTTGG+GGG | - | chr6_4:17136160-17136179 | Msa0979810:intron | 25.0% |
| !!! | TGCAAATTTGGTTGATTTTA+GGG | - | chr6_4:17136221-17136240 | Msa0979810:intron | 25.0% |
| !! | GATGTGAATCGTTTAAAATT+TGG | + | chr6_4:17136650-17136669 | None:intergenic | 25.0% |
| ! | AAATAATAGTTGCAAGCAAA+TGG | + | chr6_4:17137000-17137019 | None:intergenic | 25.0% |
| ! | ATAATGATCTCATTATTCTG+AGG | - | chr6_4:17137098-17137117 | Msa0979810:intron | 25.0% |
| ! | AGAAGAATGTTTGTTTATTC+TGG | - | chr6_4:17137139-17137158 | Msa0979810:CDS | 25.0% |
| !! | ATATTTCTTTTCAGTGTGTA+TGG | - | chr6_4:17137164-17137183 | Msa0979810:intron | 25.0% |
| ! | ATAAAAAATCACTGTAGCTA+AGG | + | chr6_4:17137490-17137509 | None:intergenic | 25.0% |
| ! | TAAACCAAAATATAACCCAA+CGG | + | chr6_4:17138101-17138120 | None:intergenic | 25.0% |
| ! | TGGTAATAAGTGTTTAACAA+AGG | - | chr6_4:17138228-17138247 | Msa0979810:intron | 25.0% |
| ! | GGTAATAAGTGTTTAACAAA+GGG | - | chr6_4:17138229-17138248 | Msa0979810:intron | 25.0% |
| ! | GTTATTGTATTATTGTTCAG+TGG | - | chr6_4:17138477-17138496 | Msa0979810:intron | 25.0% |
| ! | TAATAAGTAACAACAAACAC+TGG | + | chr6_4:17138720-17138739 | None:intergenic | 25.0% |
| !!! | TTCATCTGTTTGATTTGTAT+TGG | - | chr6_4:17139015-17139034 | Msa0979810:intron | 25.0% |
| !! | TTGCATAGAATTGTAGTTTT+TGG | - | chr6_4:17139141-17139160 | Msa0979810:intron | 25.0% |
| !! | TAAATTAGCTCTTGAAGAAA+TGG | - | chr6_4:17139256-17139275 | Msa0979810:intron | 25.0% |
| ! | AACATCTATAGAAATCTCAT+AGG | - | chr6_4:17139349-17139368 | Msa0979810:intron | 25.0% |
| ! | ACACTAAATCAAATTGATGA+GGG | + | chr6_4:17139470-17139489 | None:intergenic | 25.0% |
| ! | AACACTAAATCAAATTGATG+AGG | + | chr6_4:17139471-17139490 | None:intergenic | 25.0% |
| !!! | TCATTTTTCAAACATAGGAT+TGG | - | chr6_4:17139603-17139622 | Msa0979810:five_prime_UTR | 25.0% |
| !!! | CGATTGGTTTTGAGTTTTTT+TGG | + | chr6_4:17135124-17135143 | None:intergenic | 30.0% |
| TTGATTTCTTCGATTTCGAT+TGG | + | chr6_4:17135140-17135159 | None:intergenic | 30.0% | |
| ! | CAACTTTTCGAATCAAGTTT+TGG | - | chr6_4:17135291-17135310 | Msa0979810:three_prime_UTR | 30.0% |
| !!! | GTGATGTTAATAATGGGTTT+TGG | - | chr6_4:17135332-17135351 | Msa0979810:three_prime_UTR | 30.0% |
| !!! | TAATGGGTTTTGGTTGTTTT+TGG | - | chr6_4:17135342-17135361 | Msa0979810:three_prime_UTR | 30.0% |
| !!! | GTTTTGGTTGTTTTTGGATT+TGG | - | chr6_4:17135348-17135367 | Msa0979810:three_prime_UTR | 30.0% |
| !! | TCTTTTAGGAATTGGAATCA+AGG | - | chr6_4:17135490-17135509 | Msa0979810:CDS | 30.0% |
| !! | CTTTTAGGAATTGGAATCAA+GGG | - | chr6_4:17135491-17135510 | Msa0979810:CDS | 30.0% |
| GACGTATATATTGTGTAGTA+AGG | - | chr6_4:17135617-17135636 | Msa0979810:intron | 30.0% | |
| TGGTGAATGATAGAACATTA+TGG | - | chr6_4:17135751-17135770 | Msa0979810:intron | 30.0% | |
| ! | TAGATTTGAAACTTTGTTGC+AGG | - | chr6_4:17136083-17136102 | Msa0979810:intron | 30.0% |
| !! | GTGCAAATTTGGTTGATTTT+AGG | - | chr6_4:17136220-17136239 | Msa0979810:intron | 30.0% |
| GAAAGACAGTAACAAAATGA+CGG | + | chr6_4:17136353-17136372 | None:intergenic | 30.0% | |
| ! | TTTTGTTACTGTCTTTCGTT+TGG | - | chr6_4:17136356-17136375 | Msa0979810:intron | 30.0% |
| TCTGGTCAAGACAAAAATAA+CGG | + | chr6_4:17136398-17136417 | None:intergenic | 30.0% | |
| TAAGAGTGAAAGATTGTGAA+GGG | - | chr6_4:17136423-17136442 | Msa0979810:intron | 30.0% | |
| ! | TCTATCACTGAATGATCTTT+TGG | - | chr6_4:17136477-17136496 | Msa0979810:intron | 30.0% |
| ! | TTGGATCTTAGTAGTTCTAT+GGG | - | chr6_4:17136565-17136584 | Msa0979810:intron | 30.0% |
| !! | AGAAAAGTATCAACAATGGA+AGG | + | chr6_4:17136769-17136788 | None:intergenic | 30.0% |
| !! | CAAAATACCTCTGAAACAAA+TGG | + | chr6_4:17137551-17137570 | None:intergenic | 30.0% |
| !!! | CATTTGTTTCAGAGGTATTT+TGG | - | chr6_4:17137549-17137568 | Msa0979810:intron | 30.0% |
| ! | TTATTTGATGCTTGATAGCA+TGG | + | chr6_4:17137771-17137790 | None:intergenic | 30.0% |
| ! | CAAATAACTACTTTGAGTTC+TGG | - | chr6_4:17137784-17137803 | Msa0979810:CDS | 30.0% |
| AATAAGTGTTTAACAAAGGG+AGG | - | chr6_4:17138232-17138251 | Msa0979810:intron | 30.0% | |
| ATAAGTGTTTAACAAAGGGA+GGG | - | chr6_4:17138233-17138252 | Msa0979810:intron | 30.0% | |
| TTGTATTATTGTTCAGTGGA+TGG | - | chr6_4:17138481-17138500 | Msa0979810:intron | 30.0% | |
| TTGTGCAAATGCAGTATATA+TGG | - | chr6_4:17138782-17138801 | Msa0979810:intron | 30.0% | |
| TCAAACAGATGAAACAAATG+TGG | + | chr6_4:17139008-17139027 | None:intergenic | 30.0% | |
| AAAACTTGAATGCATTTCGA+CGG | + | chr6_4:17139122-17139141 | None:intergenic | 30.0% | |
| CTACAAAATTAATCTTGTGC+AGG | - | chr6_4:17139196-17139215 | Msa0979810:intron | 30.0% | |
| AAGTTATGAAACGCATCTTT+GGG | + | chr6_4:17139311-17139330 | None:intergenic | 30.0% | |
| ATCTCATAGGCTTCAAAATT+TGG | - | chr6_4:17139362-17139381 | Msa0979810:intron | 30.0% | |
| ! | AGCTCGTGATTTTTGATAGA+TGG | - | chr6_4:17135555-17135574 | Msa0979810:intron | 35.0% |
| ! | TCGTGATTTTTGATAGATGG+TGG | - | chr6_4:17135558-17135577 | Msa0979810:intron | 35.0% |
| !! | AGATGGTGGAAAATATGCTT+AGG | - | chr6_4:17135572-17135591 | Msa0979810:intron | 35.0% |
| !! | GATGGTGGAAAATATGCTTA+GGG | - | chr6_4:17135573-17135592 | Msa0979810:intron | 35.0% |
| ! | ATGGTGGAAAATATGCTTAG+GGG | - | chr6_4:17135574-17135593 | Msa0979810:intron | 35.0% |
| AGTAAGGAGAGTAAATCAGA+TGG | - | chr6_4:17135633-17135652 | Msa0979810:intron | 35.0% | |
| AGAAACTGTTGGGAAAGATT+TGG | - | chr6_4:17135704-17135723 | Msa0979810:intron | 35.0% | |
| TAATGTGTTGGACCGAAATT+TGG | - | chr6_4:17135731-17135750 | Msa0979810:intron | 35.0% | |
| ! | CTTTTCCTACTATGTGGAAT+CGG | + | chr6_4:17135796-17135815 | None:intergenic | 35.0% |
| TTTGTTGCAGGACTGTTATT+GGG | - | chr6_4:17136095-17136114 | Msa0979810:intron | 35.0% | |
| ! | ATGCAAGGATGGAATTGTTT+TGG | - | chr6_4:17136123-17136142 | Msa0979810:intron | 35.0% |
| TCTTTCACTCTTAGACATTC+TGG | + | chr6_4:17136416-17136435 | None:intergenic | 35.0% | |
| CTAAGAGTGAAAGATTGTGA+AGG | - | chr6_4:17136422-17136441 | Msa0979810:intron | 35.0% | |
| AAGAGTGAAAGATTGTGAAG+GGG | - | chr6_4:17136424-17136443 | Msa0979810:intron | 35.0% | |
| AGTAGCATTAAGTAGAAGCA+GGG | - | chr6_4:17136503-17136522 | Msa0979810:intron | 35.0% | |
| ! | CTTGGATCTTAGTAGTTCTA+TGG | - | chr6_4:17136564-17136583 | Msa0979810:intron | 35.0% |
| ! | AGTTCTATGGGATTAGCATA+AGG | - | chr6_4:17136577-17136596 | Msa0979810:intron | 35.0% |
| ! | TGTATTGCCATTTGTTTCAG+AGG | - | chr6_4:17137541-17137560 | Msa0979810:intron | 35.0% |
| ! | TACTTTGAGTTCTGGTTACA+TGG | - | chr6_4:17137792-17137811 | Msa0979810:CDS | 35.0% |
| ! | ACTTTGAGTTCTGGTTACAT+GGG | - | chr6_4:17137793-17137812 | Msa0979810:CDS | 35.0% |
| TACCTGCCCAAAAAAATGAT+GGG | + | chr6_4:17138167-17138186 | None:intergenic | 35.0% | |
| ATACCTGCCCAAAAAAATGA+TGG | + | chr6_4:17138168-17138187 | None:intergenic | 35.0% | |
| GAGAGATTAAGAAAAACTGC+AGG | - | chr6_4:17138272-17138291 | Msa0979810:intron | 35.0% | |
| !! | GAGTTGATTTGGACTATCTT+TGG | - | chr6_4:17138317-17138336 | Msa0979810:intron | 35.0% |
| TATCTTGTGAATGTCTTTGC+AGG | - | chr6_4:17138610-17138629 | Msa0979810:intron | 35.0% | |
| ATCTTGTGAATGTCTTTGCA+GGG | - | chr6_4:17138611-17138630 | Msa0979810:intron | 35.0% | |
| GATTGAAAAGTTGAAGCTTG+CGG | - | chr6_4:17138635-17138654 | Msa0979810:intron | 35.0% | |
| CTACTTCAATAACACCTTGT+CGG | + | chr6_4:17138671-17138690 | None:intergenic | 35.0% | |
| TATATATGGAGTTCATGACG+AGG | - | chr6_4:17138796-17138815 | Msa0979810:intron | 35.0% | |
| ATCAAACCGTCAACATGAAA+AGG | - | chr6_4:17138865-17138884 | Msa0979810:intron | 35.0% | |
| AAAGCGACTCTTAATTCTGT+CGG | - | chr6_4:17139062-17139081 | Msa0979810:intron | 35.0% | |
| CAAGTTATGAAACGCATCTT+TGG | + | chr6_4:17139312-17139331 | None:intergenic | 35.0% | |
| ! | TAACTTGTAACAGAGAGCAT+TGG | - | chr6_4:17139325-17139344 | Msa0979810:intron | 35.0% |
| !! | AACTTGTAACAGAGAGCATT+GGG | - | chr6_4:17139326-17139345 | Msa0979810:intron | 35.0% |
| ACAGCAACAGAAATCAACAA+GGG | + | chr6_4:17139416-17139435 | None:intergenic | 35.0% | |
| !! | AACATAGGATTGGAAGCATT+AGG | - | chr6_4:17139613-17139632 | Msa0979810:five_prime_UTR | 35.0% |
| TCAGCAATCATGAGTAGCAT+TGG | - | chr6_4:17135162-17135181 | Msa0979810:three_prime_UTR | 40.0% | |
| ! | ATCATGAGTAGCATTGGAAC+AGG | - | chr6_4:17135168-17135187 | Msa0979810:three_prime_UTR | 40.0% |
| TGGTGGAAAATATGCTTAGG+GGG | - | chr6_4:17135575-17135594 | Msa0979810:intron | 40.0% | |
| GAAAATATGCTTAGGGGGTT+TGG | - | chr6_4:17135580-17135599 | Msa0979810:intron | 40.0% | |
| AAGGAGAGTAAATCAGATGG+AGG | - | chr6_4:17135636-17135655 | Msa0979810:intron | 40.0% | |
| GGAGGATAGTAGATAACTAG+AGG | - | chr6_4:17135654-17135673 | Msa0979810:intron | 40.0% | |
| TAGTAGATAACTAGAGGCAG+AGG | - | chr6_4:17135660-17135679 | Msa0979810:intron | 40.0% | |
| CGATTCCACATAGTAGGAAA+AGG | - | chr6_4:17135794-17135813 | Msa0979810:intron | 40.0% | |
| CTTTGTTGCAGGACTGTTAT+TGG | - | chr6_4:17136094-17136113 | Msa0979810:intron | 40.0% | |
| TGTTATTGGGATCAGATGCA+AGG | - | chr6_4:17136108-17136127 | Msa0979810:intron | 40.0% | |
| !!! | CCGAAAGCATCATTTTCGAA+GGG | + | chr6_4:17136262-17136281 | None:intergenic | 40.0% |
| CCCTTCGAAAATGATGCTTT+CGG | - | chr6_4:17136259-17136278 | Msa0979810:intron | 40.0% | |
| CCTTCGAAAATGATGCTTTC+GGG | - | chr6_4:17136260-17136279 | Msa0979810:intron | 40.0% | |
| AACGGCGTGAATTCTTCTAT+TGG | + | chr6_4:17136288-17136307 | None:intergenic | 40.0% | |
| ! | AACAAAGTACCATTCCAGAG+TGG | + | chr6_4:17136316-17136335 | None:intergenic | 40.0% |
| CAGTAGCATTAAGTAGAAGC+AGG | - | chr6_4:17136502-17136521 | Msa0979810:intron | 40.0% | |
| TAAGTAGAAGCAGGGTTCTA+AGG | - | chr6_4:17136511-17136530 | Msa0979810:intron | 40.0% | |
| TCCTGCGTGTTTATTTGTCT+TGG | - | chr6_4:17136546-17136565 | Msa0979810:intron | 40.0% | |
| TCCAAGACAAATAAACACGC+AGG | + | chr6_4:17136550-17136569 | None:intergenic | 40.0% | |
| TTAAGTTCTTGTGTGCACCT+GGG | - | chr6_4:17136707-17136726 | Msa0979810:intron | 40.0% | |
| ! | TTCCAATTTTAGGCTGTAGC+AGG | - | chr6_4:17136904-17136923 | Msa0979810:intron | 40.0% |
| TGTTCTATCCTAACACGTGT+CGG | - | chr6_4:17137294-17137313 | Msa0979810:CDS | 40.0% | |
| ! | TAATCTTGCTGCAGACCTTT+TGG | - | chr6_4:17137342-17137361 | Msa0979810:CDS | 40.0% |
| AGTATGACACCACATCCAAA+AGG | + | chr6_4:17137360-17137379 | None:intergenic | 40.0% | |
| !! | TTTGGATGTGGTGTCATACT+AGG | - | chr6_4:17137360-17137379 | Msa0979810:intron | 40.0% |
| !!! | AGGTATTTTGGTGCTGCAAT+CGG | - | chr6_4:17137561-17137580 | Msa0979810:intron | 40.0% |
| ! | CTTTGAGTTCTGGTTACATG+GGG | - | chr6_4:17137794-17137813 | Msa0979810:CDS | 40.0% |
| ATTTGACAATCAGCTGCTGA+AGG | - | chr6_4:17137831-17137850 | Msa0979810:intron | 40.0% | |
| CTTCAAAAGAAGAGCCTCTA+AGG | + | chr6_4:17138049-17138068 | None:intergenic | 40.0% | |
| ACCTGCCCAAAAAAATGATG+GGG | + | chr6_4:17138166-17138185 | None:intergenic | 40.0% | |
| GGAGGGTAGTTCAATAAGTA+GGG | - | chr6_4:17138250-17138269 | Msa0979810:intron | 40.0% | |
| ! | AGCGAGATTGAGAGTTGATT+TGG | - | chr6_4:17138306-17138325 | Msa0979810:intron | 40.0% |
| TTTGGACATAAGCCATGACA+AGG | - | chr6_4:17138335-17138354 | Msa0979810:intron | 40.0% | |
| TAAGCCATGACAAGGAACTA+TGG | - | chr6_4:17138343-17138362 | Msa0979810:intron | 40.0% | |
| ! | CAATTGAACCTTTTCTCGCT+AGG | + | chr6_4:17138404-17138423 | None:intergenic | 40.0% |
| ATTTCGAACTCGAAATGAGC+TGG | - | chr6_4:17138831-17138850 | Msa0979810:intron | 40.0% | |
| TTTCGAACTCGAAATGAGCT+GGG | - | chr6_4:17138832-17138851 | Msa0979810:intron | 40.0% | |
| ACCGTCAACATGAAAAGGTA+AGG | - | chr6_4:17138870-17138889 | Msa0979810:intron | 40.0% | |
| ! | GCCTTACCTTTTCATGTTGA+CGG | + | chr6_4:17138874-17138893 | None:intergenic | 40.0% |
| TCAACATGAAAAGGTAAGGC+AGG | - | chr6_4:17138874-17138893 | Msa0979810:intron | 40.0% | |
| CAACATGAAAAGGTAAGGCA+GGG | - | chr6_4:17138875-17138894 | Msa0979810:intron | 40.0% | |
| AGCTAATTTAGCTGCTGTCT+TGG | + | chr6_4:17139246-17139265 | None:intergenic | 40.0% | |
| CACAGCAACAGAAATCAACA+AGG | + | chr6_4:17139417-17139436 | None:intergenic | 40.0% | |
| !! | CTTGTTGATTTCTGTTGCTG+TGG | - | chr6_4:17139415-17139434 | Msa0979810:intron | 40.0% |
| CCAAAGCTGTCGACAATAGT+GGG | - | chr6_4:17135253-17135272 | Msa0979810:three_prime_UTR | 45.0% | |
| ! | TGTAGCCGATTCCACATAGT+AGG | - | chr6_4:17135788-17135807 | Msa0979810:intron | 45.0% |
| ATTGGGATCAGATGCAAGGA+TGG | - | chr6_4:17136112-17136131 | Msa0979810:intron | 45.0% | |
| !!! | CCCGAAAGCATCATTTTCGA+AGG | + | chr6_4:17136263-17136282 | None:intergenic | 45.0% |
| GTTAAGTTCTTGTGTGCACC+TGG | - | chr6_4:17136706-17136725 | Msa0979810:intron | 45.0% | |
| TAAGTTCTTGTGTGCACCTG+GGG | - | chr6_4:17136708-17136727 | Msa0979810:intron | 45.0% | |
| GTCCTGCTACAGCCTAAAAT+TGG | + | chr6_4:17136909-17136928 | None:intergenic | 45.0% | |
| ATGGAAGGCAAATTGTTGCC+AGG | - | chr6_4:17136938-17136957 | Msa0979810:intron | 45.0% | |
| TGGAAGGCAAATTGTTGCCA+GGG | - | chr6_4:17136939-17136958 | Msa0979810:intron | 45.0% | |
| CCTGTCGTAGTTAGTTGCTT+CGG | + | chr6_4:17136971-17136990 | None:intergenic | 45.0% | |
| TGGTGATCCAATTCCTGTCA+AGG | - | chr6_4:17137184-17137203 | Msa0979810:intron | 45.0% | |
| GCAAGTTCCTTGACAGGAAT+TGG | + | chr6_4:17137194-17137213 | None:intergenic | 45.0% | |
| TGCACCTCTGCACATTATAC+TGG | - | chr6_4:17137234-17137253 | Msa0979810:intron | 45.0% | |
| ACCTCTGCACATTATACTGG+TGG | - | chr6_4:17137237-17137256 | Msa0979810:intron | 45.0% | |
| ! | TGAAGTATCCGACACGTGTT+AGG | + | chr6_4:17137305-17137324 | None:intergenic | 45.0% |
| AGATGGACCACAGTTGTACA+TGG | - | chr6_4:17137395-17137414 | Msa0979810:intron | 45.0% | |
| TTGTACATGGTCGAACCTTC+TGG | - | chr6_4:17137408-17137427 | Msa0979810:intron | 45.0% | |
| CTCACATAAGAGACACCAGA+AGG | + | chr6_4:17137426-17137445 | None:intergenic | 45.0% | |
| !!! | GGTATTTTGGTGCTGCAATC+GGG | - | chr6_4:17137562-17137581 | Msa0979810:intron | 45.0% |
| ! | ACATGGACTGTACCAGAGAA+GGG | + | chr6_4:17137974-17137993 | None:intergenic | 45.0% |
| ! | AACATGGACTGTACCAGAGA+AGG | + | chr6_4:17137975-17137994 | None:intergenic | 45.0% |
| ! | TAGGTTGAGGCATGAGCAAA+GGG | + | chr6_4:17138010-17138029 | None:intergenic | 45.0% |
| !! | TGCAAGTTTTGTCCCGTATG+AGG | - | chr6_4:17138069-17138088 | Msa0979810:intron | 45.0% |
| ! | GCTGCCGTTGGGTTATATTT+TGG | - | chr6_4:17138094-17138113 | Msa0979810:intron | 45.0% |
| !!! | ACTCGGCCCCATCATTTTTT+TGG | - | chr6_4:17138157-17138176 | Msa0979810:intron | 45.0% |
| !!! | CTCGGCCCCATCATTTTTTT+GGG | - | chr6_4:17138158-17138177 | Msa0979810:intron | 45.0% |
| GGGAGGGTAGTTCAATAAGT+AGG | - | chr6_4:17138249-17138268 | Msa0979810:intron | 45.0% | |
| CTATGGCGTCGTTTGGTAAA+TGG | - | chr6_4:17138360-17138379 | Msa0979810:intron | 45.0% | |
| TGATCCTACCTAGCGAGAAA+AGG | - | chr6_4:17138393-17138412 | Msa0979810:intron | 45.0% | |
| ! | TGAACCTTTTCTCGCTAGGT+AGG | + | chr6_4:17138400-17138419 | None:intergenic | 45.0% |
| TTCAATAACACCTTGTCGGC+AGG | + | chr6_4:17138667-17138686 | None:intergenic | 45.0% | |
| !! | GAATGCATTTCGACGGATTG+TGG | + | chr6_4:17139115-17139134 | None:intergenic | 45.0% |
| TAATCTTGTGCAGGTTCCAG+AGG | - | chr6_4:17139205-17139224 | Msa0979810:intron | 45.0% | |
| CAAATGTTGCCATAATGCCG+CGG | + | chr6_4:17139520-17139539 | None:intergenic | 45.0% | |
| !!! | ATTTTTTTAGATATTAATAA+TGG | - | chr6_4:17135459-17135478 | Msa0979810:CDS | 5.0% |
| !!! | TTTTTTTAGATATTAATAAT+GGG | - | chr6_4:17135460-17135479 | Msa0979810:CDS | 5.0% |
| !! | ATATTTAATTAACAAAAAAA+AGG | + | chr6_4:17138516-17138535 | None:intergenic | 5.0% |
| GTCACTACCTTCTCTCCTGA+TGG | - | chr6_4:17135204-17135223 | Msa0979810:three_prime_UTR | 50.0% | |
| ATCTGGAAAACGCGACCATC+AGG | + | chr6_4:17135222-17135241 | None:intergenic | 50.0% | |
| CTTTGGCAGCGTATTCGATC+TGG | + | chr6_4:17135239-17135258 | None:intergenic | 50.0% | |
| GCCAAAGCTGTCGACAATAG+TGG | - | chr6_4:17135252-17135271 | Msa0979810:three_prime_UTR | 50.0% | |
| CCCACTATTGTCGACAGCTT+TGG | + | chr6_4:17135256-17135275 | None:intergenic | 50.0% | |
| !! | AGCTGTCGACAATAGTGGGT+AGG | - | chr6_4:17135257-17135276 | Msa0979810:three_prime_UTR | 50.0% |
| !! | GCTGTCGACAATAGTGGGTA+GGG | - | chr6_4:17135258-17135277 | Msa0979810:three_prime_UTR | 50.0% |
| TAGGGGGTTTGGACATGTAG+AGG | - | chr6_4:17135591-17135610 | Msa0979810:intron | 50.0% | |
| AGGGGGTTTGGACATGTAGA+GGG | - | chr6_4:17135592-17135611 | Msa0979810:intron | 50.0% | |
| ! | CCACGCCTTTTCCTACTATG+TGG | + | chr6_4:17135802-17135821 | None:intergenic | 50.0% |
| CCACATAGTAGGAAAAGGCG+TGG | - | chr6_4:17135799-17135818 | Msa0979810:intron | 50.0% | |
| ! | GTAGGAAAAGGCGTGGTTGT+TGG | - | chr6_4:17135806-17135825 | Msa0979810:intron | 50.0% |
| CATTCCAGAGTGGCGATGAA+CGG | + | chr6_4:17136306-17136325 | None:intergenic | 50.0% | |
| CCGAAGCAACTAACTACGAC+AGG | - | chr6_4:17136968-17136987 | Msa0979810:intron | 50.0% | |
| CGATCAGCAAGTTCCTTGAC+AGG | + | chr6_4:17137200-17137219 | None:intergenic | 50.0% | |
| GCCACCAGTATAATGTGCAG+AGG | + | chr6_4:17137241-17137260 | None:intergenic | 50.0% | |
| GCACATTATACTGGTGGCTC+AGG | - | chr6_4:17137243-17137262 | Msa0979810:intron | 50.0% | |
| ! | TGCTGCAGACCTTTTGGATG+TGG | - | chr6_4:17137348-17137367 | Msa0979810:CDS | 50.0% |
| !! | GGATGTGGTGTCATACTAGG+TGG | - | chr6_4:17137363-17137382 | Msa0979810:intron | 50.0% |
| CTAGGTGGTTACGACAGAGA+TGG | - | chr6_4:17137378-17137397 | Msa0979810:intron | 50.0% | |
| GGTTCGACCATGTACAACTG+TGG | + | chr6_4:17137405-17137424 | None:intergenic | 50.0% | |
| !!! | TTTTGGTGCTGCAATCGGGA+AGG | - | chr6_4:17137566-17137585 | Msa0979810:intron | 50.0% |
| !! | TTTGGTGCTGCAATCGGGAA+GGG | - | chr6_4:17137567-17137586 | Msa0979810:intron | 50.0% |
| ACAGGCTGCGAAAACGTAAG+TGG | - | chr6_4:17137593-17137612 | Msa0979810:intron | 50.0% | |
| AGGGGGGGTAGAAGAAAACA+TGG | + | chr6_4:17137991-17138010 | None:intergenic | 50.0% | |
| AGGTTGAGGCATGAGCAAAG+GGG | + | chr6_4:17138009-17138028 | None:intergenic | 50.0% | |
| ! | GTAGGTTGAGGCATGAGCAA+AGG | + | chr6_4:17138011-17138030 | None:intergenic | 50.0% |
| CAAAGCGCACAAGTAGGTTG+AGG | + | chr6_4:17138023-17138042 | None:intergenic | 50.0% | |
| AGGCTTCAAAGCGCACAAGT+AGG | + | chr6_4:17138029-17138048 | None:intergenic | 50.0% | |
| !! | TGTGCGCTTTGAAGCCTTAG+AGG | - | chr6_4:17138032-17138051 | Msa0979810:intron | 50.0% |
| !!! | GCCCCATCATTTTTTTGGGC+AGG | - | chr6_4:17138162-17138181 | Msa0979810:intron | 50.0% |
| GACGCCATAGTTCCTTGTCA+TGG | + | chr6_4:17138350-17138369 | None:intergenic | 50.0% | |
| CAAGGAACTATGGCGTCGTT+TGG | - | chr6_4:17138353-17138372 | Msa0979810:intron | 50.0% | |
| TGGAGTTCATGACGAGGCAA+AGG | - | chr6_4:17138802-17138821 | Msa0979810:intron | 50.0% | |
| ! | GCTTCTTCTAGAAGCTCCTC+TGG | + | chr6_4:17139224-17139243 | None:intergenic | 50.0% |
| CGCGGCATTATGGCAACATT+TGG | - | chr6_4:17139518-17139537 | Msa0979810:CDS | 50.0% | |
| AACGCGACCATCAGGAGAGA+AGG | + | chr6_4:17135214-17135233 | None:intergenic | 55.0% | |
| ! | CGTTCATCGCCACTCTGGAA+TGG | - | chr6_4:17136304-17136323 | Msa0979810:intron | 55.0% |
| !! | GTAGCAGGACTAGCTGCAGA+TGG | - | chr6_4:17136919-17136938 | Msa0979810:intron | 55.0% |
| !! | CAGGACTAGCTGCAGATGGA+AGG | - | chr6_4:17136923-17136942 | Msa0979810:intron | 55.0% |
| AGTTGCTTCGGACTTAGCCC+TGG | + | chr6_4:17136959-17136978 | None:intergenic | 55.0% | |
| !! | CAAGGAACTTGCTGATCGCG+TGG | - | chr6_4:17137202-17137221 | Msa0979810:intron | 55.0% |
| ! | TGTGCAGAGGTGCACGTAAC+TGG | + | chr6_4:17137228-17137247 | None:intergenic | 55.0% |
| TGTGTTCCTCAGCCCTTCTC+TGG | - | chr6_4:17137959-17137978 | Msa0979810:intron | 55.0% | |
| ACTGTACCAGAGAAGGGCTG+AGG | + | chr6_4:17137968-17137987 | None:intergenic | 55.0% | |
| TTGAGGCATGAGCAAAGGGG+GGG | + | chr6_4:17138006-17138025 | None:intergenic | 55.0% | |
| GTTGAGGCATGAGCAAAGGG+GGG | + | chr6_4:17138007-17138026 | None:intergenic | 55.0% | |
| GGTTGAGGCATGAGCAAAGG+GGG | + | chr6_4:17138008-17138027 | None:intergenic | 55.0% | |
| TGGTCTTCTCCACTTGTCCG+CGG | - | chr6_4:17139500-17139519 | Msa0979810:CDS | 55.0% | |
| TCCACTTGTCCGCGGCATTA+TGG | - | chr6_4:17139508-17139527 | Msa0979810:CDS | 55.0% | |
| GCTGCTTAGTGCATTGCCCC+AGG | + | chr6_4:17136727-17136746 | None:intergenic | 60.0% | |
| TGCAATCGGGAAGGGCAGAC+AGG | - | chr6_4:17137575-17137594 | Msa0979810:intron | 60.0% | |
| CAACGGCAGCAGCCTCATAC+GGG | + | chr6_4:17138084-17138103 | None:intergenic | 60.0% | |
| CCAACGGCAGCAGCCTCATA+CGG | + | chr6_4:17138085-17138104 | None:intergenic | 60.0% | |
| CGTATGAGGCTGCTGCCGTT+GGG | - | chr6_4:17138083-17138102 | Msa0979810:intron | 60.0% | |
| GCGGATATGACCTGCCGACA+AGG | - | chr6_4:17138654-17138673 | Msa0979810:intron | 60.0% | |
| GCCATAATGCCGCGGACAAG+TGG | + | chr6_4:17139512-17139531 | None:intergenic | 60.0% | |
| CACGCCGTTCATCGCCACTC+TGG | - | chr6_4:17136299-17136318 | Msa0979810:intron | 65.0% | |
| CCGTATGAGGCTGCTGCCGT+TGG | - | chr6_4:17138082-17138101 | Msa0979810:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 17135077 | 17139652 | 17135077 | ID=Msa0979810;Name=Msa0979810 |
| chr6_4 | mRNA | 17135077 | 17139652 | 17135077 | ID=Msa0979810-mRNA-1;Parent=Msa0979810;Name=Msa0979810-mRNA-1;_AED=0.08;_eAED=0.08;_QI=94|1|1|1|1|1|10|363|249 |
| chr6_4 | exon | 17135077 | 17135511 | 17135077 | ID=Msa0979810-mRNA-1:exon:5454;Parent=Msa0979810-mRNA-1 |
| chr6_4 | exon | 17135843 | 17135933 | 17135843 | ID=Msa0979810-mRNA-1:exon:5453;Parent=Msa0979810-mRNA-1 |
| chr6_4 | exon | 17136032 | 17136097 | 17136032 | ID=Msa0979810-mRNA-1:exon:5452;Parent=Msa0979810-mRNA-1 |
| chr6_4 | exon | 17137122 | 17137168 | 17137122 | ID=Msa0979810-mRNA-1:exon:5451;Parent=Msa0979810-mRNA-1 |
| chr6_4 | exon | 17137289 | 17137373 | 17137289 | ID=Msa0979810-mRNA-1:exon:5450;Parent=Msa0979810-mRNA-1 |
| chr6_4 | exon | 17137465 | 17137551 | 17137465 | ID=Msa0979810-mRNA-1:exon:5449;Parent=Msa0979810-mRNA-1 |
| chr6_4 | exon | 17137740 | 17137813 | 17137740 | ID=Msa0979810-mRNA-1:exon:5448;Parent=Msa0979810-mRNA-1 |
| chr6_4 | exon | 17138404 | 17138487 | 17138404 | ID=Msa0979810-mRNA-1:exon:5447;Parent=Msa0979810-mRNA-1 |
| chr6_4 | exon | 17138585 | 17138624 | 17138585 | ID=Msa0979810-mRNA-1:exon:5446;Parent=Msa0979810-mRNA-1 |
| chr6_4 | exon | 17139455 | 17139652 | 17139455 | ID=Msa0979810-mRNA-1:exon:5445;Parent=Msa0979810-mRNA-1 |
| chr6_4 | five_prime_UTR | 17139559 | 17139652 | 17139559 | ID=Msa0979810-mRNA-1:five_prime_utr;Parent=Msa0979810-mRNA-1 |
| chr6_4 | CDS | 17139455 | 17139558 | 17139455 | ID=Msa0979810-mRNA-1:cds;Parent=Msa0979810-mRNA-1 |
| chr6_4 | CDS | 17138585 | 17138624 | 17138585 | ID=Msa0979810-mRNA-1:cds;Parent=Msa0979810-mRNA-1 |
| chr6_4 | CDS | 17138404 | 17138487 | 17138404 | ID=Msa0979810-mRNA-1:cds;Parent=Msa0979810-mRNA-1 |
| chr6_4 | CDS | 17137740 | 17137813 | 17137740 | ID=Msa0979810-mRNA-1:cds;Parent=Msa0979810-mRNA-1 |
| chr6_4 | CDS | 17137465 | 17137551 | 17137465 | ID=Msa0979810-mRNA-1:cds;Parent=Msa0979810-mRNA-1 |
| chr6_4 | CDS | 17137289 | 17137373 | 17137289 | ID=Msa0979810-mRNA-1:cds;Parent=Msa0979810-mRNA-1 |
| chr6_4 | CDS | 17137122 | 17137168 | 17137122 | ID=Msa0979810-mRNA-1:cds;Parent=Msa0979810-mRNA-1 |
| chr6_4 | CDS | 17136032 | 17136097 | 17136032 | ID=Msa0979810-mRNA-1:cds;Parent=Msa0979810-mRNA-1 |
| chr6_4 | CDS | 17135843 | 17135933 | 17135843 | ID=Msa0979810-mRNA-1:cds;Parent=Msa0979810-mRNA-1 |
| chr6_4 | CDS | 17135440 | 17135511 | 17135440 | ID=Msa0979810-mRNA-1:cds;Parent=Msa0979810-mRNA-1 |
| chr6_4 | three_prime_UTR | 17135077 | 17135439 | 17135077 | ID=Msa0979810-mRNA-1:three_prime_utr;Parent=Msa0979810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
