Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0661700 | XP_039684368.1 | 67.391 | 92 | 24 | 2 | 51 | 137 | 189 | 279 | 3.46e-28 | 115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0092690 | Msa0661700 | 0.802007 | 6.881042e-49 | -8.615850e-47 |
| Msa0092740 | Msa0661700 | 0.807172 | 5.754969e-50 | -8.615850e-47 |
| Msa0639120 | Msa0661700 | -0.800982 | 1.116249e-48 | -8.615850e-47 |
| Msa0661700 | Msa1299360 | -0.837842 | 4.094808e-57 | -8.615850e-47 |
| Msa0661700 | Msa1404190 | -0.803551 | 3.302669e-49 | -8.615850e-47 |
| Msa0172960 | Msa0661700 | 0.800440 | 1.439648e-48 | -8.615850e-47 |
| Msa0469910 | Msa0661700 | 0.805678 | 1.188528e-49 | -8.615850e-47 |
| Msa0560470 | Msa0661700 | -0.822372 | 2.453266e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0661700 | MtrunA17_Chr8g0360271 | 65.217 | 92 | 26 | 2 | 51 | 137 | 189 | 279 | 1.04e-29 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 53 sgRNAs with CRISPR-Local
Find 595 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATATAACTTGTAGTTGTTT+AGG | 0.279901 | 4_3:+73179578 | Msa0661700:three_prime_UTR |
| AGCATGGGCTAAAGTTTCTT+TGG | 0.327848 | 4_3:+73179359 | Msa0661700:CDS |
| ATGTGATGTAGACTCCTTCT+TGG | 0.355967 | 4_3:-73179316 | None:intergenic |
| GCTTATCATAGTATTTGTTT+AGG | 0.360905 | 4_3:+73179631 | Msa0661700:three_prime_UTR |
| ATTGCAGATAAGAAAATCTA+AGG | 0.369580 | 4_3:-73179656 | None:intergenic |
| GGAGCAACCGAGGAGGAGGC+AGG | 0.397527 | 4_3:-73178504 | None:intergenic |
| TATGGAAAAGTTTATGAATC+CGG | 0.398707 | 4_3:+73179489 | Msa0661700:CDS |
| TCGGTTGCTCCTGCTTCTAC+TGG | 0.415271 | 4_3:+73178516 | Msa0661700:CDS |
| TCATGAACTAGAAGACATTT+CGG | 0.419596 | 4_3:+73179458 | Msa0661700:CDS |
| GGATGGGTACTTAGGCTCTA+AGG | 0.431894 | 4_3:+73179556 | Msa0661700:three_prime_UTR |
| TTTCTTTGGCAAGAGCTGAT+AGG | 0.436030 | 4_3:+73179373 | Msa0661700:CDS |
| GGCGCAACAAATGAGGAGGC+AGG | 0.465413 | 4_3:-73178459 | None:intergenic |
| GATACCTGTGCAGCAGTGTC+AGG | 0.474964 | 4_3:-73178543 | None:intergenic |
| AGCAGGAGCAACCGAGGAGG+AGG | 0.476005 | 4_3:-73178508 | None:intergenic |
| AAGTCAGGATTTGGCACCTA+AGG | 0.483216 | 4_3:+73178334 | Msa0661700:intron |
| CACACGCAGTGAAAAGCAAC+AGG | 0.495677 | 4_3:+73179281 | Msa0661700:intron |
| GAATGAGGCACTTGCAGCAT+GGG | 0.501641 | 4_3:+73179344 | Msa0661700:CDS |
| AAGAATCACGGCGGAGATCG+TGG | 0.506278 | 4_3:-73171396 | None:intergenic |
| TGCGCCTGCAACCTCTTCAT+CGG | 0.511322 | 4_3:+73178476 | Msa0661700:CDS |
| AAAAGTTTATGAATCCGGAT+TGG | 0.515747 | 4_3:+73179494 | Msa0661700:CDS |
| GACATTTCGGATGATGCCTA+TGG | 0.521967 | 4_3:+73179471 | Msa0661700:CDS |
| AGTTTATGAATCCGGATTGG+AGG | 0.528903 | 4_3:+73179497 | Msa0661700:CDS |
| CAGAAAATAATGCTCCCCTT+AGG | 0.531543 | 4_3:-73178350 | None:intergenic |
| GTTTATGAATCCGGATTGGA+GGG | 0.534860 | 4_3:+73179498 | Msa0661700:CDS |
| AGTCAGGATTTGGCACCTAA+GGG | 0.535756 | 4_3:+73178335 | Msa0661700:intron |
| CTAATGAGAGGAAGCGTGGA+TGG | 0.536061 | 4_3:+73179539 | Msa0661700:exon |
| GGAAGCGTGGATGGGTACTT+AGG | 0.537157 | 4_3:+73179548 | Msa0661700:three_prime_UTR |
| TGTACCTGACACTGCTGCAC+AGG | 0.537919 | 4_3:+73178539 | Msa0661700:CDS |
| ATATACACTTCCCTCCAATC+CGG | 0.538012 | 4_3:-73179508 | None:intergenic |
| GCGACCGATGAAGAGGTTGC+AGG | 0.538259 | 4_3:-73178480 | None:intergenic |
| GGTCGCGCCTGCCTCCTCCT+CGG | 0.541454 | 4_3:+73178497 | Msa0661700:CDS |
| AAAAGAATCATGGCGGAGAA+CGG | 0.549126 | 4_3:-73171430 | None:intergenic |
| GGTTGCAGGCGCAACAAATG+AGG | 0.561298 | 4_3:-73178466 | None:intergenic |
| TCAGGTACACCAGTAGAAGC+AGG | 0.562120 | 4_3:-73178525 | None:intergenic |
| GGCAGGCGCGACCGATGAAG+AGG | 0.564500 | 4_3:-73178487 | None:intergenic |
| AGTAGAAGCAGGAGCAACCG+AGG | 0.584298 | 4_3:-73178514 | None:intergenic |
| TACATCACATCATATGAATG+AGG | 0.591772 | 4_3:+73179329 | Msa0661700:CDS |
| TAATGAGAGGAAGCGTGGAT+GGG | 0.591816 | 4_3:+73179540 | Msa0661700:exon |
| TGAATGAGGCACTTGCAGCA+TGG | 0.593350 | 4_3:+73179343 | Msa0661700:CDS |
| ATTGCTAACTGCATAACTCA+TGG | 0.595136 | 4_3:-73178398 | None:intergenic |
| TTGTTCTCTTGCAAAGTCTG+TGG | 0.606108 | 4_3:+73179428 | Msa0661700:CDS |
| GAGGCAGGAGCAGCGAAACG+TGG | 0.608035 | 4_3:-73178444 | None:intergenic |
| AAGAGCTGATAGGAGTGCAG+AGG | 0.619518 | 4_3:+73179383 | Msa0661700:CDS |
| GGTTCGTGTGAGATCCAAGA+AGG | 0.624211 | 4_3:+73179302 | Msa0661700:CDS |
| TGCAGGCGCAACAAATGAGG+AGG | 0.635245 | 4_3:-73178463 | None:intergenic |
| AGAATCATGGCGGAGAACGG+TGG | 0.636240 | 4_3:-73171427 | None:intergenic |
| ATGTCTAATGAGAGGAAGCG+TGG | 0.638032 | 4_3:+73179535 | Msa0661700:exon |
| GTCAGGATTTGGCACCTAAG+GGG | 0.649594 | 4_3:+73178336 | Msa0661700:intron |
| AGAAGCAGGAGCAACCGAGG+AGG | 0.653647 | 4_3:-73178511 | None:intergenic |
| ACGCTTCCTCTCATTAGACA+TGG | 0.653912 | 4_3:-73179533 | None:intergenic |
| ATATCGCCATGTCTAATGAG+AGG | 0.663098 | 4_3:+73179527 | Msa0661700:exon |
| AGATCGTGGAAGAATCGCGG+TGG | 0.684314 | 4_3:-73171382 | None:intergenic |
| CGGAGATCGTGGAAGAATCG+CGG | 0.687883 | 4_3:-73171385 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAGGTTAATTTTAAAATT+TGG | + | chr4_3:73171611-73171630 | Msa0661700:intron | 10.0% |
| !!! | TTAGGTTAATTTTAAAATTT+GGG | + | chr4_3:73171612-73171631 | Msa0661700:intron | 10.0% |
| !!! | TTAATTTGTTAATGTTAAAT+GGG | - | chr4_3:73172708-73172727 | None:intergenic | 10.0% |
| !!! | ATTAATTTGTTAATGTTAAA+TGG | - | chr4_3:73172709-73172728 | None:intergenic | 10.0% |
| !!! | TGAGAATTTTTTTTTTTTTT+TGG | + | chr4_3:73174542-73174561 | Msa0661700:intron | 10.0% |
| !!! | ATTTTTTTTTTTTTTTGGTT+TGG | + | chr4_3:73174547-73174566 | Msa0661700:intron | 10.0% |
| !!! | ATTGTCTTTTATTATATTTT+AGG | - | chr4_3:73177712-73177731 | None:intergenic | 10.0% |
| !! | TTAAAGTAAAATATTCTAAA+AGG | + | chr4_3:73177732-73177751 | Msa0661700:intron | 10.0% |
| !! | AAAAATGAAAAACAAAATCA+AGG | - | chr4_3:73171494-73171513 | None:intergenic | 15.0% |
| !! | AGCAACAAAATATTTAATTA+TGG | + | chr4_3:73172130-73172149 | Msa0661700:intron | 15.0% |
| !!! | TAATTTGTTAATGTTAAATG+GGG | - | chr4_3:73172707-73172726 | None:intergenic | 15.0% |
| !!! | CTTGTTTTTAATGTAAAATA+TGG | - | chr4_3:73173017-73173036 | None:intergenic | 15.0% |
| !!! | TAATAATTTTCCATTCATAT+TGG | + | chr4_3:73173616-73173635 | Msa0661700:intron | 15.0% |
| !!! | GTTATTTTAATTTGTTTTGT+AGG | - | chr4_3:73174630-73174649 | None:intergenic | 15.0% |
| !! | AATAAAAGCAATAAAATTCA+TGG | + | chr4_3:73174660-73174679 | Msa0661700:intron | 15.0% |
| !! | ATAAAAGCAATAAAATTCAT+GGG | + | chr4_3:73174661-73174680 | Msa0661700:intron | 15.0% |
| !!! | ATTATTCACACTTTTTATAA+TGG | - | chr4_3:73175854-73175873 | None:intergenic | 15.0% |
| !! | AAAGTTGAAATATGAAAATT+CGG | + | chr4_3:73176175-73176194 | Msa0661700:intron | 15.0% |
| !! | TTCAAATTATTTGGAAAAAA+AGG | - | chr4_3:73178285-73178304 | None:intergenic | 15.0% |
| !! | AATAAAAACAAACAAAAATG+AGG | - | chr4_3:73178675-73178694 | None:intergenic | 15.0% |
| !!! | TTAGTCTATGATTTTCAATT+AGG | + | chr4_3:73171594-73171613 | Msa0661700:intron | 20.0% |
| !!! | AATTTTAAAATTTGGGATTG+TGG | + | chr4_3:73171619-73171638 | Msa0661700:intron | 20.0% |
| !! | TAATTTAACAATTAAGCACA+AGG | + | chr4_3:73172409-73172428 | Msa0661700:intron | 20.0% |
| !! | AATTTAACAATTAAGCACAA+GGG | + | chr4_3:73172410-73172429 | Msa0661700:intron | 20.0% |
| !!! | TTCACTTTAAGTTCAAATTA+AGG | + | chr4_3:73172612-73172631 | Msa0661700:intron | 20.0% |
| !!! | TTTTACTCTTAAGACTTTAA+AGG | + | chr4_3:73172785-73172804 | Msa0661700:intron | 20.0% |
| !! | TTTACTCTTAAGACTTTAAA+GGG | + | chr4_3:73172786-73172805 | Msa0661700:intron | 20.0% |
| !! | AAACAAAAGAATAAAGTTCA+AGG | + | chr4_3:73173067-73173086 | Msa0661700:intron | 20.0% |
| !! | AACAAAAGAATAAAGTTCAA+GGG | + | chr4_3:73173068-73173087 | Msa0661700:intron | 20.0% |
| !! | TTTGATTATTCTATCTAATC+CGG | - | chr4_3:73173586-73173605 | None:intergenic | 20.0% |
| !! | TTCAATTGTTAAAAAGAAAC+AGG | - | chr4_3:73173796-73173815 | None:intergenic | 20.0% |
| !! | CAAATAATAGCAAATGTTAA+TGG | + | chr4_3:73173830-73173849 | Msa0661700:intron | 20.0% |
| !!! | TTTTTTTTTTTTTGGGTGAA+AGG | + | chr4_3:73174428-73174447 | Msa0661700:intron | 20.0% |
| !!! | ATTGTTCTTAATTTTCACAA+CGG | + | chr4_3:73175055-73175074 | Msa0661700:intron | 20.0% |
| !!! | AAATCAAACTGAATTTTTGA+AGG | - | chr4_3:73175279-73175298 | None:intergenic | 20.0% |
| !! | TGGTTTAATTCATTAAAACT+TGG | - | chr4_3:73176067-73176086 | None:intergenic | 20.0% |
| !! | AGAGAGAAAAGTTTATAAAA+AGG | + | chr4_3:73176759-73176778 | Msa0661700:intron | 20.0% |
| !! | GAGAGAAAAGTTTATAAAAA+GGG | + | chr4_3:73176760-73176779 | Msa0661700:intron | 20.0% |
| !! | TGAATCTAGATTAGAAATTA+GGG | + | chr4_3:73177215-73177234 | Msa0661700:intron | 20.0% |
| !!! | ATATTTTAGGAACGAATATA+TGG | - | chr4_3:73177699-73177718 | None:intergenic | 20.0% |
| !!! | TTTTCTGTTGTTATTATTGA+AGG | + | chr4_3:73178144-73178163 | Msa0661700:intron | 20.0% |
| !! | GATCAATCTTTCAAATTATT+TGG | - | chr4_3:73178294-73178313 | None:intergenic | 20.0% |
| !! | CAAGTTATGTTCTATAAAAA+TGG | - | chr4_3:73179179-73179198 | None:intergenic | 20.0% |
| ! | ACACAAAATCAAGTGAAAAA+TGG | - | chr4_3:73171564-73171583 | None:intergenic | 25.0% |
| !! | TCACTTGATTTTGTGTTTAT+TGG | + | chr4_3:73171568-73171587 | Msa0661700:intron | 25.0% |
| !! | TCATAATTTGTCTACATGTA+TGG | - | chr4_3:73171703-73171722 | None:intergenic | 25.0% |
| ! | TCTATCATAATAATGCACTT+AGG | - | chr4_3:73172029-73172048 | None:intergenic | 25.0% |
| ! | TCATAATATCTGTCTTATAC+AGG | - | chr4_3:73172297-73172316 | None:intergenic | 25.0% |
| ! | TGTATAAGACAGATATTATG+AGG | + | chr4_3:73172296-73172315 | Msa0661700:intron | 25.0% |
| ! | CTCTTATATGAAATGAAGAA+AGG | - | chr4_3:73172362-73172381 | None:intergenic | 25.0% |
| ! | TTCATTTCATATAAGAGTGA+TGG | + | chr4_3:73172365-73172384 | Msa0661700:intron | 25.0% |
| ! | TCATTTCATATAAGAGTGAT+GGG | + | chr4_3:73172366-73172385 | Msa0661700:intron | 25.0% |
| ! | ATTTAACAATTAAGCACAAG+GGG | + | chr4_3:73172411-73172430 | Msa0661700:intron | 25.0% |
| ! | AAACAAATTCATCAATGCTA+GGG | - | chr4_3:73172594-73172613 | None:intergenic | 25.0% |
| ! | AAAGTAGTATAAGTTTGTGT+GGG | - | chr4_3:73172768-73172787 | None:intergenic | 25.0% |
| ! | AAAAGTAGTATAAGTTTGTG+TGG | - | chr4_3:73172769-73172788 | None:intergenic | 25.0% |
| !! | GTGTATGAATAGGTATTTTA+AGG | - | chr4_3:73172842-73172861 | None:intergenic | 25.0% |
| ! | TTTCACAATAAAACAAGATG+TGG | + | chr4_3:73172904-73172923 | Msa0661700:intron | 25.0% |
| ! | TTCACAATAAAACAAGATGT+GGG | + | chr4_3:73172905-73172924 | Msa0661700:intron | 25.0% |
| !!! | TGTTTTGTTTTTATAGCAAG+AGG | - | chr4_3:73173052-73173071 | None:intergenic | 25.0% |
| !! | TCTTTTCTTTTGAATCATTG+AGG | - | chr4_3:73173159-73173178 | None:intergenic | 25.0% |
| ! | TAATCCGGACTTAAATAATT+CGG | - | chr4_3:73173571-73173590 | None:intergenic | 25.0% |
| ! | ATTAATGTTATGGATAGACT+AGG | - | chr4_3:73174002-73174021 | None:intergenic | 25.0% |
| ! | TATCCATAACATTAATCATC+AGG | + | chr4_3:73174006-73174025 | Msa0661700:intron | 25.0% |
| ! | ATCCATAACATTAATCATCA+GGG | + | chr4_3:73174007-73174026 | Msa0661700:intron | 25.0% |
| ! | AATCAACAACTCATAATCAT+GGG | - | chr4_3:73174107-73174126 | None:intergenic | 25.0% |
| ! | TTGAGTTTATTGATGAAGAT+TGG | + | chr4_3:73174285-73174304 | Msa0661700:intron | 25.0% |
| !!! | TTTTTTTTTGGTTTGGTTTC+TGG | + | chr4_3:73174554-73174573 | Msa0661700:intron | 25.0% |
| ! | ATGAAATTCCATTAACACAA+GGG | - | chr4_3:73174950-73174969 | None:intergenic | 25.0% |
| ! | GTGAAAATTAAGAACAATGA+AGG | - | chr4_3:73175053-73175072 | None:intergenic | 25.0% |
| !! | TTGTTCTTAATTTTCACAAC+GGG | + | chr4_3:73175056-73175075 | Msa0661700:intron | 25.0% |
| !! | TATAAGTGCTATTACTCTTA+GGG | - | chr4_3:73175102-73175121 | None:intergenic | 25.0% |
| !! | ATATAAGTGCTATTACTCTT+AGG | - | chr4_3:73175103-73175122 | None:intergenic | 25.0% |
| ! | TAAGAGTAATAGCACTTATA+TGG | + | chr4_3:73175102-73175121 | Msa0661700:intron | 25.0% |
| !! | AATAGCACTTATATGGTTTT+TGG | + | chr4_3:73175109-73175128 | Msa0661700:intron | 25.0% |
| !! | ATAGCACTTATATGGTTTTT+GGG | + | chr4_3:73175110-73175129 | Msa0661700:intron | 25.0% |
| ! | ACTATGCTCAATATAATCAA+GGG | - | chr4_3:73175466-73175485 | None:intergenic | 25.0% |
| ! | AACTATGCTCAATATAATCA+AGG | - | chr4_3:73175467-73175486 | None:intergenic | 25.0% |
| !! | TGCATCAACATAAATTTTTG+TGG | + | chr4_3:73175817-73175836 | Msa0661700:intron | 25.0% |
| !! | GCATCAACATAAATTTTTGT+GGG | + | chr4_3:73175818-73175837 | Msa0661700:intron | 25.0% |
| !! | AAATTTTTGTGGGATACAAA+AGG | + | chr4_3:73175828-73175847 | Msa0661700:intron | 25.0% |
| ! | ATACAATTCACTCAAAAAGA+TGG | - | chr4_3:73175956-73175975 | None:intergenic | 25.0% |
| !!! | AAGTGAACAATTTTAGAATG+AGG | + | chr4_3:73175989-73176008 | Msa0661700:intron | 25.0% |
| !!! | TTTTAGAATGAGGAAAGAAT+TGG | + | chr4_3:73175999-73176018 | Msa0661700:intron | 25.0% |
| !! | TTTAGAATGAGGAAAGAATT+GGG | + | chr4_3:73176000-73176019 | Msa0661700:intron | 25.0% |
| !! | GTTCAGCAAAATCAATTTTT+CGG | - | chr4_3:73176217-73176236 | None:intergenic | 25.0% |
| ! | ACAATAATATAAAAGAGCCT+TGG | + | chr4_3:73176806-73176825 | Msa0661700:intron | 25.0% |
| ! | CAATAATATAAAAGAGCCTT+GGG | + | chr4_3:73176807-73176826 | Msa0661700:intron | 25.0% |
| ! | AACCATGAAATTAGATGTTT+AGG | - | chr4_3:73176875-73176894 | None:intergenic | 25.0% |
| ! | GATTAACAATTATCAAACTG+TGG | - | chr4_3:73177182-73177201 | None:intergenic | 25.0% |
| ! | GTGAATCTAGATTAGAAATT+AGG | + | chr4_3:73177214-73177233 | Msa0661700:intron | 25.0% |
| ! | ATTAGGGTTACATAGAAATT+AGG | + | chr4_3:73177231-73177250 | Msa0661700:intron | 25.0% |
| ! | TTAGGGTTACATAGAAATTA+GGG | + | chr4_3:73177232-73177251 | Msa0661700:intron | 25.0% |
| ! | TTACATAGAAATTAGGGTTT+AGG | + | chr4_3:73177238-73177257 | Msa0661700:intron | 25.0% |
| !! | AAACATTCATCTTTTGTTCT+TGG | - | chr4_3:73177409-73177428 | None:intergenic | 25.0% |
| ! | CAAAAGATGAATGTTTATGA+TGG | + | chr4_3:73177413-73177432 | Msa0661700:intron | 25.0% |
| ! | TTAGAAACTAAGCTACTATA+AGG | + | chr4_3:73177468-73177487 | Msa0661700:intron | 25.0% |
| ! | TAGAAACTAAGCTACTATAA+GGG | + | chr4_3:73177469-73177488 | Msa0661700:intron | 25.0% |
| ! | GTTATTTATTTATGAGTTGC+TGG | + | chr4_3:73178223-73178242 | Msa0661700:intron | 25.0% |
| ! | AGAAAAACGCATAAAAAGTA+TGG | - | chr4_3:73178723-73178742 | None:intergenic | 25.0% |
| ! | AGTACAGTAAAATCTAATAC+AGG | - | chr4_3:73178966-73178985 | None:intergenic | 25.0% |
| !! | TAGATTTTACTGTACTTCTA+TGG | + | chr4_3:73178970-73178989 | Msa0661700:intron | 25.0% |
| ! | ACAGAACAGATTGAATTAAT+GGG | - | chr4_3:73179068-73179087 | None:intergenic | 25.0% |
| ! | TATGGAAAAGTTTATGAATC+CGG | + | chr4_3:73179489-73179508 | Msa0661700:CDS | 25.0% |
| !! | GATATAACTTGTAGTTGTTT+AGG | + | chr4_3:73179578-73179597 | Msa0661700:three_prime_UTR | 25.0% |
| ! | GCTTATCATAGTATTTGTTT+AGG | + | chr4_3:73179631-73179650 | Msa0661700:three_prime_UTR | 25.0% |
| ! | ATTGCAGATAAGAAAATCTA+AGG | - | chr4_3:73179659-73179678 | None:intergenic | 25.0% |
| !! | GATTTTCTTATCTGCAATAT+TGG | + | chr4_3:73179661-73179680 | Msa0661700:three_prime_UTR | 25.0% |
| TGTTCACAAGGGATAATTAA+TGG | + | chr4_3:73171999-73172018 | Msa0661700:intron | 30.0% | |
| GAACAAATGTCTCAAAAGAA+AGG | + | chr4_3:73172162-73172181 | Msa0661700:intron | 30.0% | |
| CTTATACAGGAGCAATAAAA+GGG | - | chr4_3:73172284-73172303 | None:intergenic | 30.0% | |
| TCTTATACAGGAGCAATAAA+AGG | - | chr4_3:73172285-73172304 | None:intergenic | 30.0% | |
| AGACAGATATTATGAGGAAT+AGG | + | chr4_3:73172302-73172321 | Msa0661700:intron | 30.0% | |
| ! | AATGAAGAAAGGACTTTTCT+CGG | - | chr4_3:73172351-73172370 | None:intergenic | 30.0% |
| ! | TTAGGGTGATTTTGAATCTA+GGG | - | chr4_3:73172500-73172519 | None:intergenic | 30.0% |
| AACAAATTCATCAATGCTAG+GGG | - | chr4_3:73172593-73172612 | None:intergenic | 30.0% | |
| GAAACAAATTCATCAATGCT+AGG | - | chr4_3:73172595-73172614 | None:intergenic | 30.0% | |
| TTTGTTAATGTTAAATGGGG+CGG | - | chr4_3:73172704-73172723 | None:intergenic | 30.0% | |
| AATAAAGTTCAAGGGAGTTT+GGG | + | chr4_3:73173076-73173095 | Msa0661700:intron | 30.0% | |
| ATTAGAATAGAGAAGAGTAG+AGG | + | chr4_3:73173219-73173238 | Msa0661700:intron | 30.0% | |
| ! | GAAAGCTCACAATTTTATTG+AGG | + | chr4_3:73173247-73173266 | Msa0661700:intron | 30.0% |
| ! | AATTTTATTGAGGTCCATAG+TGG | + | chr4_3:73173257-73173276 | Msa0661700:intron | 30.0% |
| CATTTATTTGATTGCTCCTT+TGG | + | chr4_3:73173333-73173352 | Msa0661700:intron | 30.0% | |
| ! | GTGGAAAATTTGCTTTATGT+TGG | - | chr4_3:73173543-73173562 | None:intergenic | 30.0% |
| ! | TCCATTCATATTGGTAATTG+TGG | + | chr4_3:73173625-73173644 | Msa0661700:intron | 30.0% |
| ACCACAATTACCAATATGAA+TGG | - | chr4_3:73173629-73173648 | None:intergenic | 30.0% | |
| GTATGAATTAAAGGATCAAG+AGG | - | chr4_3:73173710-73173729 | None:intergenic | 30.0% | |
| ! | TTTTATTGCTAGGAAGTTTG+GGG | - | chr4_3:73173736-73173755 | None:intergenic | 30.0% |
| ! | CTTTTATTGCTAGGAAGTTT+GGG | - | chr4_3:73173737-73173756 | None:intergenic | 30.0% |
| ! | ACTTTTATTGCTAGGAAGTT+TGG | - | chr4_3:73173738-73173757 | None:intergenic | 30.0% |
| !! | GAATCATCACTTTTATTGCT+AGG | - | chr4_3:73173746-73173765 | None:intergenic | 30.0% |
| GATTAGAGTGATATAATGGT+AGG | - | chr4_3:73173771-73173790 | None:intergenic | 30.0% | |
| GGATGATTAGAGTGATATAA+TGG | - | chr4_3:73173775-73173794 | None:intergenic | 30.0% | |
| ATATAAAGTAGGAAAGAGGT+AGG | - | chr4_3:73173901-73173920 | None:intergenic | 30.0% | |
| TACCTCTTTCCTACTTTATA+TGG | + | chr4_3:73173900-73173919 | Msa0661700:intron | 30.0% | |
| GAATGGATGAACATATGATT+AGG | - | chr4_3:73173980-73173999 | None:intergenic | 30.0% | |
| TACCCTGATGATTAATGTTA+TGG | - | chr4_3:73174012-73174031 | None:intergenic | 30.0% | |
| ! | ATTGTACCTATTTCTTTGCT+TGG | + | chr4_3:73174065-73174084 | Msa0661700:intron | 30.0% |
| CAATCAACAACTCATAATCA+TGG | - | chr4_3:73174108-73174127 | None:intergenic | 30.0% | |
| CAATTGGAATCAAAGAAGAA+AGG | - | chr4_3:73174171-73174190 | None:intergenic | 30.0% | |
| AGTTTATTGATGAAGATTGG+TGG | + | chr4_3:73174288-73174307 | Msa0661700:intron | 30.0% | |
| ATGAAGTTTGAAGAGAGTTA+TGG | + | chr4_3:73174326-73174345 | Msa0661700:intron | 30.0% | |
| !!! | TTTTTTTTTGGGTGAAAGGT+TGG | + | chr4_3:73174432-73174451 | Msa0661700:intron | 30.0% |
| TCCAAATATGATGCAAAAAG+GGG | - | chr4_3:73174601-73174620 | None:intergenic | 30.0% | |
| GTCCAAATATGATGCAAAAA+GGG | - | chr4_3:73174602-73174621 | None:intergenic | 30.0% | |
| TGTCCAAATATGATGCAAAA+AGG | - | chr4_3:73174603-73174622 | None:intergenic | 30.0% | |
| TATACCCAATCTTTCAGAAA+GGG | + | chr4_3:73174749-73174768 | Msa0661700:intron | 30.0% | |
| CTTCCTAGATTCTTAAGTTT+AGG | + | chr4_3:73174858-73174877 | Msa0661700:intron | 30.0% | |
| CATGAAATTCCATTAACACA+AGG | - | chr4_3:73174951-73174970 | None:intergenic | 30.0% | |
| ! | TGTTCTTAATTTTCACAACG+GGG | + | chr4_3:73175057-73175076 | Msa0661700:intron | 30.0% |
| ! | TAGCACTTATATGGTTTTTG+GGG | + | chr4_3:73175111-73175130 | Msa0661700:intron | 30.0% |
| ! | TTCTAAAAAAAGTTCCAAGC+TGG | + | chr4_3:73175340-73175359 | Msa0661700:intron | 30.0% |
| ! | TGTTGTCCAAAAAGATTTTC+AGG | + | chr4_3:73175410-73175429 | Msa0661700:intron | 30.0% |
| ! | GTTGTCCAAAAAGATTTTCA+GGG | + | chr4_3:73175411-73175430 | Msa0661700:intron | 30.0% |
| ! | TTGTCCAAAAAGATTTTCAG+GGG | + | chr4_3:73175412-73175431 | Msa0661700:intron | 30.0% |
| CAGGGGTTTGAAAAAAAATT+TGG | + | chr4_3:73175429-73175448 | Msa0661700:intron | 30.0% | |
| ! | ACTACTTTCCTTTTTCCTTA+GGG | - | chr4_3:73176105-73176124 | None:intergenic | 30.0% |
| !!! | TCAACTTTTTTAAGACTCAG+TGG | - | chr4_3:73176163-73176182 | None:intergenic | 30.0% |
| TGAACTAACTCAATAAGTTC+AGG | + | chr4_3:73176232-73176251 | Msa0661700:intron | 30.0% | |
| AGATAATAACGATATGGCTA+AGG | - | chr4_3:73176350-73176369 | None:intergenic | 30.0% | |
| TTGGGAAGATAATAACGATA+TGG | - | chr4_3:73176356-73176375 | None:intergenic | 30.0% | |
| TTATCTTCCCAAGAAGTTAA+AGG | + | chr4_3:73176364-73176383 | Msa0661700:intron | 30.0% | |
| !! | TCTTTTGCCTTTAACTTCTT+GGG | - | chr4_3:73176374-73176393 | None:intergenic | 30.0% |
| !! | TTCTTTTGCCTTTAACTTCT+TGG | - | chr4_3:73176375-73176394 | None:intergenic | 30.0% |
| CTTACTACTATTACTTCGAT+AGG | - | chr4_3:73176681-73176700 | None:intergenic | 30.0% | |
| GACCTAAACATCTAATTTCA+TGG | + | chr4_3:73176870-73176889 | Msa0661700:intron | 30.0% | |
| ! | ACACACTAATTTCTAAAGAC+CGG | + | chr4_3:73176896-73176915 | Msa0661700:intron | 30.0% |
| TCGCTTTATGAATTGATGTT+TGG | + | chr4_3:73177116-73177135 | Msa0661700:intron | 30.0% | |
| CGCTTTATGAATTGATGTTT+GGG | + | chr4_3:73177117-73177136 | Msa0661700:intron | 30.0% | |
| ATTGTTAATCCACGTTAAGA+CGG | + | chr4_3:73177192-73177211 | Msa0661700:intron | 30.0% | |
| TTCTTCGTCTTAGGATTATT+GGG | - | chr4_3:73177296-73177315 | None:intergenic | 30.0% | |
| !! | TTTTAGGAACGAATATATGG+TGG | - | chr4_3:73177696-73177715 | None:intergenic | 30.0% |
| AAGGTGAGAAAAATTGTGTT+TGG | - | chr4_3:73178108-73178127 | None:intergenic | 30.0% | |
| ! | AACACAATTTTTCTCACCTT+TGG | + | chr4_3:73178108-73178127 | Msa0661700:intron | 30.0% |
| TAGATGACTGAGATTATAGA+TGG | - | chr4_3:73178584-73178603 | None:intergenic | 30.0% | |
| TGATGACAATTAGTGAGTTA+TGG | + | chr4_3:73178848-73178867 | Msa0661700:intron | 30.0% | |
| !! | AGTTAGTTGTTTCTTTGGTT+AGG | + | chr4_3:73178872-73178891 | Msa0661700:intron | 30.0% |
| TGGTTAGGCTTTACATATAT+AGG | + | chr4_3:73178887-73178906 | Msa0661700:intron | 30.0% | |
| GGTTAGGCTTTACATATATA+GGG | + | chr4_3:73178888-73178907 | Msa0661700:intron | 30.0% | |
| GTTAGGCTTTACATATATAG+GGG | + | chr4_3:73178889-73178908 | Msa0661700:intron | 30.0% | |
| GACAGAACAGATTGAATTAA+TGG | - | chr4_3:73179069-73179088 | None:intergenic | 30.0% | |
| TACATCACATCATATGAATG+AGG | + | chr4_3:73179329-73179348 | Msa0661700:CDS | 30.0% | |
| TCATGAACTAGAAGACATTT+CGG | + | chr4_3:73179458-73179477 | Msa0661700:CDS | 30.0% | |
| ! | GGATTCATAAACTTTTCCAT+AGG | - | chr4_3:73179490-73179509 | None:intergenic | 30.0% |
| AAAAGTTTATGAATCCGGAT+TGG | + | chr4_3:73179494-73179513 | Msa0661700:CDS | 30.0% | |
| !!! | TGCAGATGATTGTTTTTGTT+TGG | + | chr4_3:73179701-73179720 | Msa0661700:three_prime_UTR | 30.0% |
| GTGGAGATCAAAAAGAATCA+CGG | - | chr4_3:73171411-73171430 | None:intergenic | 35.0% | |
| AGAACGAAAAAGAATCATGG+CGG | - | chr4_3:73171440-73171459 | None:intergenic | 35.0% | |
| GATGTAACCTGAAAAAAGCA+CGG | - | chr4_3:73171466-73171485 | None:intergenic | 35.0% | |
| AGTCACATTTCTGTTCACAA+GGG | + | chr4_3:73171988-73172007 | Msa0661700:intron | 35.0% | |
| ! | TCTCGGTTACTTTAGCATTA+AGG | - | chr4_3:73172334-73172353 | None:intergenic | 35.0% |
| ! | TAGGGTGATTTTGAATCTAG+GGG | - | chr4_3:73172499-73172518 | None:intergenic | 35.0% |
| ! | CTTAGGGTGATTTTGAATCT+AGG | - | chr4_3:73172501-73172520 | None:intergenic | 35.0% |
| ! | TAATTTTGCAGCACTGCTTA+GGG | - | chr4_3:73172517-73172536 | None:intergenic | 35.0% |
| ! | ATAATTTTGCAGCACTGCTT+AGG | - | chr4_3:73172518-73172537 | None:intergenic | 35.0% |
| ACAAATTCATCAATGCTAGG+GGG | - | chr4_3:73172592-73172611 | None:intergenic | 35.0% | |
| ACATCCTAACTTCCTAATTG+TGG | - | chr4_3:73172646-73172665 | None:intergenic | 35.0% | |
| TTGTTAATGTTAAATGGGGC+GGG | - | chr4_3:73172703-73172722 | None:intergenic | 35.0% | |
| CTTTGAGCAAGTGTATGAAT+AGG | - | chr4_3:73172852-73172871 | None:intergenic | 35.0% | |
| GAATAAAGTTCAAGGGAGTT+TGG | + | chr4_3:73173075-73173094 | Msa0661700:intron | 35.0% | |
| ACGACTCTAGACACTTTATT+AGG | + | chr4_3:73173105-73173124 | Msa0661700:intron | 35.0% | |
| TTGAAAGAACCAATGTCCAA+AGG | - | chr4_3:73173352-73173371 | None:intergenic | 35.0% | |
| ! | GTGCTTTATTCTGTGAACTT+TGG | + | chr4_3:73173392-73173411 | Msa0661700:intron | 35.0% |
| GTGGAAGCTATAATGATGAA+CGG | - | chr4_3:73173434-73173453 | None:intergenic | 35.0% | |
| TTCATCATTATAGCTTCCAC+CGG | + | chr4_3:73173434-73173453 | Msa0661700:intron | 35.0% | |
| ! | GTACATAATGATGGTGATGA+TGG | - | chr4_3:73173507-73173526 | None:intergenic | 35.0% |
| ACCTCCGAATTATTTAAGTC+CGG | + | chr4_3:73173564-73173583 | Msa0661700:intron | 35.0% | |
| AATTGTGGTCATGAGTTCTA+AGG | + | chr4_3:73173640-73173659 | Msa0661700:intron | 35.0% | |
| TAAAGGATCAAGAGGATAGA+GGG | - | chr4_3:73173702-73173721 | None:intergenic | 35.0% | |
| TTAAAGGATCAAGAGGATAG+AGG | - | chr4_3:73173703-73173722 | None:intergenic | 35.0% | |
| TTGGGGTGAGTATGAATTAA+AGG | - | chr4_3:73173719-73173738 | None:intergenic | 35.0% | |
| TAGAGTGATATAATGGTAGG+TGG | - | chr4_3:73173768-73173787 | None:intergenic | 35.0% | |
| CACCATATAAAGTAGGAAAG+AGG | - | chr4_3:73173905-73173924 | None:intergenic | 35.0% | |
| TGTTATGGATAGACTAGGAA+TGG | - | chr4_3:73173997-73174016 | None:intergenic | 35.0% | |
| AGGATTCCAAGCAAAGAAAT+AGG | - | chr4_3:73174074-73174093 | None:intergenic | 35.0% | |
| TTTGCTTGGAATCCTTGATT+TGG | + | chr4_3:73174079-73174098 | Msa0661700:intron | 35.0% | |
| TAATCATGGGATCCAAATCA+AGG | - | chr4_3:73174094-73174113 | None:intergenic | 35.0% | |
| ! | ATGAGTTGTTGATTGCTTCT+TGG | + | chr4_3:73174113-73174132 | Msa0661700:intron | 35.0% |
| CCAAATCAACTAAGGTCAAT+TGG | - | chr4_3:73174187-73174206 | None:intergenic | 35.0% | |
| CCAATTGACCTTAGTTGATT+TGG | + | chr4_3:73174184-73174203 | Msa0661700:intron | 35.0% | |
| AATCCACACCAAATCAACTA+AGG | - | chr4_3:73174195-73174214 | None:intergenic | 35.0% | |
| !!! | AGTTGATTTGGTGTGGATTT+TGG | + | chr4_3:73174196-73174215 | Msa0661700:intron | 35.0% |
| !!! | GTTGATTTGGTGTGGATTTT+GGG | + | chr4_3:73174197-73174216 | Msa0661700:intron | 35.0% |
| AAGTTTGAAGAGAGTTATGG+AGG | + | chr4_3:73174329-73174348 | Msa0661700:intron | 35.0% | |
| TTATGGAGGTAGAATGAAAG+AGG | + | chr4_3:73174343-73174362 | Msa0661700:intron | 35.0% | |
| ! | TCCCCTTTTTGCATCATATT+TGG | + | chr4_3:73174597-73174616 | Msa0661700:intron | 35.0% |
| ! | GTTTAGAGTCATTAGCTTGA+CGG | + | chr4_3:73174704-73174723 | Msa0661700:intron | 35.0% |
| ! | CTTTCTGAAAGATTGGGTAT+AGG | - | chr4_3:73174750-73174769 | None:intergenic | 35.0% |
| CTATACCCAATCTTTCAGAA+AGG | + | chr4_3:73174748-73174767 | Msa0661700:intron | 35.0% | |
| ! | TTGTCCCTTTCTGAAAGATT+GGG | - | chr4_3:73174756-73174775 | None:intergenic | 35.0% |
| ! | ATTGTCCCTTTCTGAAAGAT+TGG | - | chr4_3:73174757-73174776 | None:intergenic | 35.0% |
| AATCTTTCAGAAAGGGACAA+TGG | + | chr4_3:73174756-73174775 | Msa0661700:intron | 35.0% | |
| CCACCTAAACTTAAGAATCT+AGG | - | chr4_3:73174864-73174883 | None:intergenic | 35.0% | |
| CCTAGATTCTTAAGTTTAGG+TGG | + | chr4_3:73174861-73174880 | Msa0661700:intron | 35.0% | |
| ! | AGTTTAGGTGGCAATTTGTT+TGG | + | chr4_3:73174873-73174892 | Msa0661700:intron | 35.0% |
| CATAAACTGCTCATCTAACT+TGG | + | chr4_3:73174914-73174933 | Msa0661700:intron | 35.0% | |
| TCATCAAACCCTTGTGTTAA+TGG | + | chr4_3:73174939-73174958 | Msa0661700:intron | 35.0% | |
| AGAACAATGAAGGAGAGATA+GGG | - | chr4_3:73175043-73175062 | None:intergenic | 35.0% | |
| AAGAACAATGAAGGAGAGAT+AGG | - | chr4_3:73175044-73175063 | None:intergenic | 35.0% | |
| TAGGGATGGTAAACAATTAG+AGG | - | chr4_3:73175084-73175103 | None:intergenic | 35.0% | |
| !!! | ACTTATATGGTTTTTGGGGT+TGG | + | chr4_3:73175115-73175134 | Msa0661700:intron | 35.0% |
| CATCTTACTGTGAGTAACTA+TGG | + | chr4_3:73175220-73175239 | Msa0661700:intron | 35.0% | |
| GTCTTCTGTTGATGTAAGTT+TGG | + | chr4_3:73175244-73175263 | Msa0661700:intron | 35.0% | |
| !! | CAGTTTGATTTTCAAGCTCT+TGG | + | chr4_3:73175288-73175307 | Msa0661700:intron | 35.0% |
| TCTTTGGTTGTTTGCATAAC+TGG | + | chr4_3:73175376-73175395 | Msa0661700:intron | 35.0% | |
| CTTTGGTTGTTTGCATAACT+GGG | + | chr4_3:73175377-73175396 | Msa0661700:intron | 35.0% | |
| ! | CAAACCCCTGAAAATCTTTT+TGG | - | chr4_3:73175419-73175438 | None:intergenic | 35.0% |
| TTCTAACAACACTACCTAGT+TGG | + | chr4_3:73175501-73175520 | Msa0661700:intron | 35.0% | |
| TGTGAAGTTTGTGGTGTATT+TGG | - | chr4_3:73175545-73175564 | None:intergenic | 35.0% | |
| TTTAGCAGCTAGATGATCAA+GGG | + | chr4_3:73175637-73175656 | Msa0661700:intron | 35.0% | |
| CCAATTCTCTAAACCATGAT+GGG | + | chr4_3:73175877-73175896 | Msa0661700:intron | 35.0% | |
| CAATTCTCTAAACCATGATG+GGG | + | chr4_3:73175878-73175897 | Msa0661700:intron | 35.0% | |
| !! | AACTTGGTTCTATCACTTCA+TGG | - | chr4_3:73176051-73176070 | None:intergenic | 35.0% |
| ! | TACTTTCCTTTTTCCTTAGG+GGG | - | chr4_3:73176103-73176122 | None:intergenic | 35.0% |
| ! | CTACTTTCCTTTTTCCTTAG+GGG | - | chr4_3:73176104-73176123 | None:intergenic | 35.0% |
| ! | CACTACTTTCCTTTTTCCTT+AGG | - | chr4_3:73176106-73176125 | None:intergenic | 35.0% |
| TCAAAATTGTCATCAACCGT+TGG | + | chr4_3:73176262-73176281 | Msa0661700:intron | 35.0% | |
| CAAAATTGTCATCAACCGTT+GGG | + | chr4_3:73176263-73176282 | Msa0661700:intron | 35.0% | |
| TCGTATGACTCATTTGAAGA+TGG | + | chr4_3:73176298-73176317 | Msa0661700:intron | 35.0% | |
| CGTATGACTCATTTGAAGAT+GGG | + | chr4_3:73176299-73176318 | Msa0661700:intron | 35.0% | |
| ATCAAATTTCAACAACTCCC+CGG | + | chr4_3:73176611-73176630 | Msa0661700:intron | 35.0% | |
| !!! | GTTTGGCTCTATCAAGTTTT+TGG | - | chr4_3:73176645-73176664 | None:intergenic | 35.0% |
| TAAAAGAGCCTTGGGATTAT+TGG | + | chr4_3:73176815-73176834 | Msa0661700:intron | 35.0% | |
| ATGACAAACCAATAATCCCA+AGG | - | chr4_3:73176826-73176845 | None:intergenic | 35.0% | |
| ! | TTTAGGTCTTGTCTAGTGAA+GGG | - | chr4_3:73176858-73176877 | None:intergenic | 35.0% |
| AGTAATCATGTCAGCGAAAT+AGG | - | chr4_3:73176984-73177003 | None:intergenic | 35.0% | |
| GATTACTAGAAGATGCATAG+AGG | + | chr4_3:73176997-73177016 | Msa0661700:intron | 35.0% | |
| ATCAATTCATAAAGCGAGAG+CGG | - | chr4_3:73177113-73177132 | None:intergenic | 35.0% | |
| ! | TGAATTGATGTTTGGGATGA+TGG | + | chr4_3:73177124-73177143 | Msa0661700:intron | 35.0% |
| !!! | GGTTTAGGCTTGTTTTGTTT+AGG | + | chr4_3:73177253-73177272 | Msa0661700:intron | 35.0% |
| TCTTCGTCTTAGGATTATTG+GGG | - | chr4_3:73177295-73177314 | None:intergenic | 35.0% | |
| CTTCTTCGTCTTAGGATTAT+TGG | - | chr4_3:73177297-73177316 | None:intergenic | 35.0% | |
| ACTAACGTTCATTGTAGACA+TGG | + | chr4_3:73177324-73177343 | Msa0661700:intron | 35.0% | |
| CTAACGTTCATTGTAGACAT+GGG | + | chr4_3:73177325-73177344 | Msa0661700:intron | 35.0% | |
| TAACGTTCATTGTAGACATG+GGG | + | chr4_3:73177326-73177345 | Msa0661700:intron | 35.0% | |
| TTGAAGAAAAGCAGCAAAAG+TGG | + | chr4_3:73177526-73177545 | Msa0661700:intron | 35.0% | |
| TGTACATCTATGTGAGACAA+TGG | + | chr4_3:73177888-73177907 | Msa0661700:intron | 35.0% | |
| ATCATACGACTCACATGTAT+AGG | - | chr4_3:73177927-73177946 | None:intergenic | 35.0% | |
| TTTGGCTACACAAAGTACAT+GGG | - | chr4_3:73178090-73178109 | None:intergenic | 35.0% | |
| ! | TTATGAGTTGCTGGTTAAGT+TGG | + | chr4_3:73178232-73178251 | Msa0661700:intron | 35.0% |
| ! | TGTTTCTGATTCTGAAAGTC+AGG | + | chr4_3:73178319-73178338 | Msa0661700:intron | 35.0% |
| ! | TGATTCTGAAAGTCAGGATT+TGG | + | chr4_3:73178325-73178344 | Msa0661700:intron | 35.0% |
| ATTGCTAACTGCATAACTCA+TGG | - | chr4_3:73178401-73178420 | None:intergenic | 35.0% | |
| ATTATAGATGGCTGAGATGA+AGG | - | chr4_3:73178572-73178591 | None:intergenic | 35.0% | |
| !! | TTGCACTTTTTATGTGCAGT+AGG | + | chr4_3:73178742-73178761 | Msa0661700:intron | 35.0% |
| ! | ACTTTTTATGTGCAGTAGGA+GGG | + | chr4_3:73178746-73178765 | Msa0661700:intron | 35.0% |
| !! | ATGGCAGTTAGTTGTTTCTT+TGG | + | chr4_3:73178867-73178886 | Msa0661700:intron | 35.0% |
| ! | CACTTTTGTGCAATATGATC+AGG | - | chr4_3:73179143-73179162 | None:intergenic | 35.0% |
| GAGATCAAAAAGAATCACGG+CGG | - | chr4_3:73171408-73171427 | None:intergenic | 40.0% | |
| ! | AAAAGAATCATGGCGGAGAA+CGG | - | chr4_3:73171433-73171452 | None:intergenic | 40.0% |
| CGGAGAACGAAAAAGAATCA+TGG | - | chr4_3:73171443-73171462 | None:intergenic | 40.0% | |
| !! | ACTCTAGAAGCTTTGAATGC+TGG | + | chr4_3:73171673-73171692 | Msa0661700:intron | 40.0% |
| ! | CTAGAAGTGTGTTAGGATCA+TGG | + | chr4_3:73171829-73171848 | Msa0661700:intron | 40.0% |
| CAGTCACATTTCTGTTCACA+AGG | + | chr4_3:73171987-73172006 | Msa0661700:intron | 40.0% | |
| TTTGCTTGTCCTCAAGCAAA+AGG | + | chr4_3:73172094-73172113 | Msa0661700:intron | 40.0% | |
| GACTTGATGTTGGGTAGAAT+AGG | - | chr4_3:73172234-73172253 | None:intergenic | 40.0% | |
| CTCACTTGAGACTTGATGTT+GGG | - | chr4_3:73172243-73172262 | None:intergenic | 40.0% | |
| ACTCACTTGAGACTTGATGT+TGG | - | chr4_3:73172244-73172263 | None:intergenic | 40.0% | |
| TACAGGAGCAATAAAAGGGT+TGG | - | chr4_3:73172280-73172299 | None:intergenic | 40.0% | |
| ! | GATTTTGAATCTAGGGGGAA+AGG | - | chr4_3:73172493-73172512 | None:intergenic | 40.0% |
| ! | AGGGTGATTTTGAATCTAGG+GGG | - | chr4_3:73172498-73172517 | None:intergenic | 40.0% |
| TATTTGTTTCATCTCCGCGT+AGG | + | chr4_3:73172539-73172558 | Msa0661700:intron | 40.0% | |
| ATCCAAAAAGACTTCCTACG+CGG | - | chr4_3:73172556-73172575 | None:intergenic | 40.0% | |
| ACCACCACAATTAGGAAGTT+AGG | + | chr4_3:73172639-73172658 | Msa0661700:intron | 40.0% | |
| TCCTAACTTCCTAATTGTGG+TGG | - | chr4_3:73172643-73172662 | None:intergenic | 40.0% | |
| ACTTGCTCAAAGATTGCAAC+TGG | + | chr4_3:73172860-73172879 | Msa0661700:intron | 40.0% | |
| CTTGCTCAAAGATTGCAACT+GGG | + | chr4_3:73172861-73172880 | Msa0661700:intron | 40.0% | |
| ACAATGCTTCTCCTAAGTGT+GGG | - | chr4_3:73173136-73173155 | None:intergenic | 40.0% | |
| ATAGAGAAGAGTAGAGGAAG+AGG | + | chr4_3:73173225-73173244 | Msa0661700:intron | 40.0% | |
| !! | GAAGGTGTTGCATCATGTTT+CGG | + | chr4_3:73173291-73173310 | Msa0661700:intron | 40.0% |
| TTGATTGCTCCTTTGGACAT+TGG | + | chr4_3:73173340-73173359 | Msa0661700:intron | 40.0% | |
| AACACCTTGTCTTTGTTGCT+CGG | + | chr4_3:73173370-73173389 | Msa0661700:intron | 40.0% | |
| AAGCTATAATGATGAACGGC+GGG | - | chr4_3:73173430-73173449 | None:intergenic | 40.0% | |
| GAAGCTATAATGATGAACGG+CGG | - | chr4_3:73173431-73173450 | None:intergenic | 40.0% | |
| !! | TGATGATGGTGGTGATAAAG+CGG | - | chr4_3:73173493-73173512 | None:intergenic | 40.0% |
| !! | CATAATGATGGTGATGATGG+TGG | - | chr4_3:73173504-73173523 | None:intergenic | 40.0% |
| TCACCATCATTATGTACCTG+TGG | + | chr4_3:73173510-73173529 | Msa0661700:intron | 40.0% | |
| CACCATCATTATGTACCTGT+GGG | + | chr4_3:73173511-73173530 | Msa0661700:intron | 40.0% | |
| AACCCACAGGTACATAATGA+TGG | - | chr4_3:73173516-73173535 | None:intergenic | 40.0% | |
| TTATGTTGGTACTAACCCAC+AGG | - | chr4_3:73173529-73173548 | None:intergenic | 40.0% | |
| CTTAAATAATTCGGAGGTGG+TGG | - | chr4_3:73173562-73173581 | None:intergenic | 40.0% | |
| GGACTTAAATAATTCGGAGG+TGG | - | chr4_3:73173565-73173584 | None:intergenic | 40.0% | |
| TCCGGACTTAAATAATTCGG+AGG | - | chr4_3:73173568-73173587 | None:intergenic | 40.0% | |
| AAAGGATCAAGAGGATAGAG+GGG | - | chr4_3:73173701-73173720 | None:intergenic | 40.0% | |
| GATTGATGAGCTGTTGTTGT+GGG | - | chr4_3:73173869-73173888 | None:intergenic | 40.0% | |
| ! | TGGCTTGCACCATATAAAGT+AGG | - | chr4_3:73173912-73173931 | None:intergenic | 40.0% |
| TAGGTACCTTCAAAGGGTTA+TGG | - | chr4_3:73173932-73173951 | None:intergenic | 40.0% | |
| TGTGCTTAGGTACCTTCAAA+GGG | - | chr4_3:73173938-73173957 | None:intergenic | 40.0% | |
| !! | TTTGAAGGTACCTAAGCACA+GGG | + | chr4_3:73173938-73173957 | Msa0661700:intron | 40.0% |
| AATAACACAACCCTGTGCTT+AGG | - | chr4_3:73173951-73173970 | None:intergenic | 40.0% | |
| CTAGAACTATCTATGCTTGC+AGG | - | chr4_3:73174035-73174054 | None:intergenic | 40.0% | |
| TAGACTGAAGACTTCAGAAG+TGG | - | chr4_3:73174144-73174163 | None:intergenic | 40.0% | |
| !! | TGACCTTAGTTGATTTGGTG+TGG | + | chr4_3:73174189-73174208 | Msa0661700:intron | 40.0% |
| !! | TGGATTTTGGGTGAAGGTTA+GGG | + | chr4_3:73174209-73174228 | Msa0661700:intron | 40.0% |
| !! | CGAAAGGTTGGTTTAGTGAT+GGG | + | chr4_3:73174241-73174260 | Msa0661700:intron | 40.0% |
| !! | GAAAGGTTGGTTTAGTGATG+GGG | + | chr4_3:73174242-73174261 | Msa0661700:intron | 40.0% |
| ATGGGGTTGGGGTTTAAATA+AGG | + | chr4_3:73174259-73174278 | Msa0661700:intron | 40.0% | |
| GAAGATTGGTGGAGAGATTA+TGG | + | chr4_3:73174299-73174318 | Msa0661700:intron | 40.0% | |
| ! | CTTTTTACAGAAGCTTGGCA+CGG | - | chr4_3:73174484-73174503 | None:intergenic | 40.0% |
| TGCCAAGCTTCTGTAAAAAG+AGG | + | chr4_3:73174484-73174503 | Msa0661700:intron | 40.0% | |
| GCCAAGCTTCTGTAAAAAGA+GGG | + | chr4_3:73174485-73174504 | Msa0661700:intron | 40.0% | |
| ! | TCCCTCTTTTTACAGAAGCT+TGG | - | chr4_3:73174489-73174508 | None:intergenic | 40.0% |
| !! | TTGGTTTGGTTTCTGGTCAA+TGG | + | chr4_3:73174561-73174580 | Msa0661700:intron | 40.0% |
| ! | TTAGCTTGACGGTTAGAAAG+TGG | + | chr4_3:73174715-73174734 | Msa0661700:intron | 40.0% |
| ATTCTCTCCCAAATCACACA+TGG | + | chr4_3:73174791-73174810 | Msa0661700:intron | 40.0% | |
| GACAAAGCCATGTGTGATTT+GGG | - | chr4_3:73174801-73174820 | None:intergenic | 40.0% | |
| AGACAAAGCCATGTGTGATT+TGG | - | chr4_3:73174802-73174821 | None:intergenic | 40.0% | |
| GTTTCAGATCCTATGACACA+AGG | + | chr4_3:73174825-73174844 | Msa0661700:intron | 40.0% | |
| AGATCCTATGACACAAGGTA+GGG | + | chr4_3:73174830-73174849 | Msa0661700:intron | 40.0% | |
| ! | TTTTCCCTACCTTGTGTCAT+AGG | - | chr4_3:73174837-73174856 | None:intergenic | 40.0% |
| GGAATTTCATGCTCATGAGA+TGG | + | chr4_3:73174960-73174979 | Msa0661700:intron | 40.0% | |
| TCATGAGATGGTGAAACGAA+TGG | + | chr4_3:73174972-73174991 | Msa0661700:intron | 40.0% | |
| ! | TGGCTTTTCATTCTCTCCTA+TGG | + | chr4_3:73174992-73175011 | Msa0661700:intron | 40.0% |
| ! | AGTGCTATTACTCTTAGGGA+TGG | - | chr4_3:73175098-73175117 | None:intergenic | 40.0% |
| !!! | ATGGTTTTTGGGGTTGGTTT+CGG | + | chr4_3:73175121-73175140 | Msa0661700:intron | 40.0% |
| ! | AGTTCCAAGCTGGATTTTTG+AGG | + | chr4_3:73175350-73175369 | Msa0661700:intron | 40.0% |
| ! | GTTCCAAGCTGGATTTTTGA+GGG | + | chr4_3:73175351-73175370 | Msa0661700:intron | 40.0% |
| !! | TGGATTTTTGAGGGACTCTT+TGG | + | chr4_3:73175360-73175379 | Msa0661700:intron | 40.0% |
| TGAGCATAGTTTACTTGCTC+AGG | + | chr4_3:73175476-73175495 | Msa0661700:intron | 40.0% | |
| !! | ATTGGCATTGATTGCCAACT+AGG | - | chr4_3:73175518-73175537 | None:intergenic | 40.0% |
| GTTGGCAATCAATGCCAATA+TGG | + | chr4_3:73175519-73175538 | Msa0661700:intron | 40.0% | |
| TGTGGTGTATTTGGCCATAT+TGG | - | chr4_3:73175536-73175555 | None:intergenic | 40.0% | |
| ACACCACAAACTTCACAAAG+AGG | + | chr4_3:73175548-73175567 | Msa0661700:intron | 40.0% | |
| TCACCTCTTTGTGAAGTTTG+TGG | - | chr4_3:73175554-73175573 | None:intergenic | 40.0% | |
| ACTTCACAAAGAGGTGATAC+AGG | + | chr4_3:73175557-73175576 | Msa0661700:intron | 40.0% | |
| CTTCACAAAGAGGTGATACA+GGG | + | chr4_3:73175558-73175577 | Msa0661700:intron | 40.0% | |
| TTCACAAAGAGGTGATACAG+GGG | + | chr4_3:73175559-73175578 | Msa0661700:intron | 40.0% | |
| CTTTAGCAGCTAGATGATCA+AGG | + | chr4_3:73175636-73175655 | Msa0661700:intron | 40.0% | |
| ! | ATACCTACCTCTTTCTGAGA+GGG | + | chr4_3:73175674-73175693 | Msa0661700:intron | 40.0% |
| TGACACAAAACCACTATCAG+TGG | - | chr4_3:73175736-73175755 | None:intergenic | 40.0% | |
| ! | AGAAGCATATGCTTTGATCG+AGG | - | chr4_3:73175762-73175781 | None:intergenic | 40.0% |
| ATTTATGTTGATGCAGCTGC+AGG | - | chr4_3:73175812-73175831 | None:intergenic | 40.0% | |
| GCCAATTCTCTAAACCATGA+TGG | + | chr4_3:73175876-73175895 | Msa0661700:intron | 40.0% | |
| CCCATCATGGTTTAGAGAAT+TGG | - | chr4_3:73175880-73175899 | None:intergenic | 40.0% | |
| AGAATCTCTTTACGATGCGT+GGG | - | chr4_3:73175933-73175952 | None:intergenic | 40.0% | |
| TCACTTCATGGCAACAAATG+AGG | - | chr4_3:73176039-73176058 | None:intergenic | 40.0% | |
| ATGAAAATTCGGATCCTCAG+TGG | + | chr4_3:73176186-73176205 | Msa0661700:intron | 40.0% | |
| !! | ATTTTTCGGATCAACCACTG+AGG | - | chr4_3:73176203-73176222 | None:intergenic | 40.0% |
| TTGAATTCACAACTCCCTAG+CGG | - | chr4_3:73176716-73176735 | None:intergenic | 40.0% | |
| ! | GTTTAGGTCTTGTCTAGTGA+AGG | - | chr4_3:73176859-73176878 | None:intergenic | 40.0% |
| TGCTAGAAGTAAACTCTCAC+CGG | - | chr4_3:73176955-73176974 | None:intergenic | 40.0% | |
| TGAGTAGACTTCTTCGTCTT+AGG | - | chr4_3:73177305-73177324 | None:intergenic | 40.0% | |
| AACGTTCATTGTAGACATGG+GGG | + | chr4_3:73177327-73177346 | Msa0661700:intron | 40.0% | |
| GCAAAACAGTAAAGCTGCAA+CGG | + | chr4_3:73177491-73177510 | Msa0661700:intron | 40.0% | |
| TGTCTTGGAGCAAAAGAAAG+AGG | - | chr4_3:73177669-73177688 | None:intergenic | 40.0% | |
| !! | ATATATGGTGGAAGGTGTCT+TGG | - | chr4_3:73177684-73177703 | None:intergenic | 40.0% |
| ! | AGGAACGAATATATGGTGGA+AGG | - | chr4_3:73177692-73177711 | None:intergenic | 40.0% |
| GTTTGGCTACACAAAGTACA+TGG | - | chr4_3:73178091-73178110 | None:intergenic | 40.0% | |
| CAGAAAATAATGCTCCCCTT+AGG | - | chr4_3:73178353-73178372 | None:intergenic | 40.0% | |
| !!! | CTAAGGGGAGCATTATTTTC+TGG | + | chr4_3:73178351-73178370 | Msa0661700:five_prime_UTR | 40.0% |
| CGAAAATTTCAGCAGCAGTT+TGG | - | chr4_3:73178700-73178719 | None:intergenic | 40.0% | |
| !! | CACTTTTTATGTGCAGTAGG+AGG | + | chr4_3:73178745-73178764 | Msa0661700:intron | 40.0% |
| TGCCATCAGTTAGTTACACA+GGG | - | chr4_3:73178801-73178820 | None:intergenic | 40.0% | |
| TACATATATAGGGGAGTCGT+AGG | + | chr4_3:73178898-73178917 | Msa0661700:intron | 40.0% | |
| ACATATATAGGGGAGTCGTA+GGG | + | chr4_3:73178899-73178918 | Msa0661700:intron | 40.0% | |
| TTGACACTATCATCCTTGTC+TGG | + | chr4_3:73179036-73179055 | Msa0661700:intron | 40.0% | |
| ACTATCATCCTTGTCTGGAA+TGG | + | chr4_3:73179041-73179060 | Msa0661700:intron | 40.0% | |
| ATGTGATGTAGACTCCTTCT+TGG | - | chr4_3:73179319-73179338 | None:intergenic | 40.0% | |
| ! | AGCATGGGCTAAAGTTTCTT+TGG | + | chr4_3:73179359-73179378 | Msa0661700:CDS | 40.0% |
| TTTCTTTGGCAAGAGCTGAT+AGG | + | chr4_3:73179373-73179392 | Msa0661700:CDS | 40.0% | |
| TTGTTCTCTTGCAAAGTCTG+TGG | + | chr4_3:73179428-73179447 | Msa0661700:CDS | 40.0% | |
| ! | AGTTTATGAATCCGGATTGG+AGG | + | chr4_3:73179497-73179516 | Msa0661700:CDS | 40.0% |
| ! | GTTTATGAATCCGGATTGGA+GGG | + | chr4_3:73179498-73179517 | Msa0661700:CDS | 40.0% |
| ATATACACTTCCCTCCAATC+CGG | - | chr4_3:73179511-73179530 | None:intergenic | 40.0% | |
| ATATCGCCATGTCTAATGAG+AGG | + | chr4_3:73179527-73179546 | Msa0661700:exon | 40.0% | |
| ! | GTAACCTGAAAAAAGCACGG+CGG | - | chr4_3:73171463-73171482 | None:intergenic | 45.0% |
| !! | CTCTGCTCTAGAAGTGTGTT+AGG | + | chr4_3:73171822-73171841 | Msa0661700:intron | 45.0% |
| ! | TGTCTGTTGCCTTTTGCTTG+AGG | - | chr4_3:73172106-73172125 | None:intergenic | 45.0% |
| TAGGAGCTATCTATCCTCGT+AGG | + | chr4_3:73172445-73172464 | Msa0661700:intron | 45.0% | |
| ATCCTCGTAGGAAGTCTTCT+CGG | + | chr4_3:73172457-73172476 | Msa0661700:intron | 45.0% | |
| TTCATCAATGCTAGGGGGAA+AGG | - | chr4_3:73172587-73172606 | None:intergenic | 45.0% | |
| AAGGAGTCACCACCACAATT+AGG | + | chr4_3:73172631-73172650 | Msa0661700:intron | 45.0% | |
| TTGTCCTTTCCCCCATATGT+TGG | + | chr4_3:73172668-73172687 | Msa0661700:intron | 45.0% | |
| AGAATGGCACCAACATATGG+GGG | - | chr4_3:73172680-73172699 | None:intergenic | 45.0% | |
| GAGAATGGCACCAACATATG+GGG | - | chr4_3:73172681-73172700 | None:intergenic | 45.0% | |
| GGAGAATGGCACCAACATAT+GGG | - | chr4_3:73172682-73172701 | None:intergenic | 45.0% | |
| ! | CAACTGGGTGCTTTTCTCAT+TGG | + | chr4_3:73172876-73172895 | Msa0661700:intron | 45.0% |
| AATGCTTCTCCTAAGTGTGG+GGG | - | chr4_3:73173134-73173153 | None:intergenic | 45.0% | |
| CAATGCTTCTCCTAAGTGTG+GGG | - | chr4_3:73173135-73173154 | None:intergenic | 45.0% | |
| GACAATGCTTCTCCTAAGTG+TGG | - | chr4_3:73173137-73173156 | None:intergenic | 45.0% | |
| !! | TTGAGGTCCATAGTGGACTT+TGG | + | chr4_3:73173264-73173283 | Msa0661700:intron | 45.0% |
| TTCACCTCCAAAGTCCACTA+TGG | - | chr4_3:73173274-73173293 | None:intergenic | 45.0% | |
| !! | ATAGTGGACTTTGGAGGTGA+AGG | + | chr4_3:73173273-73173292 | Msa0661700:intron | 45.0% |
| TTGCACCATGAACAAGAAGC+CGG | - | chr4_3:73173456-73173475 | None:intergenic | 45.0% | |
| !! | GTGGTCATGAGTTCTAAGGA+AGG | + | chr4_3:73173644-73173663 | Msa0661700:intron | 45.0% |
| GGATTGATGAGCTGTTGTTG+TGG | - | chr4_3:73173870-73173889 | None:intergenic | 45.0% | |
| GGAAAGAGGTAGGAATGAAG+AGG | - | chr4_3:73173891-73173910 | None:intergenic | 45.0% | |
| TGCAAGCCATAACCCTTTGA+AGG | + | chr4_3:73173923-73173942 | Msa0661700:intron | 45.0% | |
| CTGTGCTTAGGTACCTTCAA+AGG | - | chr4_3:73173939-73173958 | None:intergenic | 45.0% | |
| !! | CTTTGAAGGTACCTAAGCAC+AGG | + | chr4_3:73173937-73173956 | Msa0661700:intron | 45.0% |
| !! | TTGGTGTGGATTTTGGGTGA+AGG | + | chr4_3:73174203-73174222 | Msa0661700:intron | 45.0% |
| !! | GTGGATTTTGGGTGAAGGTT+AGG | + | chr4_3:73174208-73174227 | Msa0661700:intron | 45.0% |
| !! | GTTAGGGTTTTGTGTGCGAA+AGG | + | chr4_3:73174225-73174244 | Msa0661700:intron | 45.0% |
| !! | GCGAAAGGTTGGTTTAGTGA+TGG | + | chr4_3:73174240-73174259 | Msa0661700:intron | 45.0% |
| ! | GTTGGTTTAGTGATGGGGTT+GGG | + | chr4_3:73174247-73174266 | Msa0661700:intron | 45.0% |
| ! | TTGGTTTAGTGATGGGGTTG+GGG | + | chr4_3:73174248-73174267 | Msa0661700:intron | 45.0% |
| !! | TTTTGGGTGAAAGGTTGGCA+CGG | + | chr4_3:73174437-73174456 | Msa0661700:intron | 45.0% |
| CAGATCCTATGACACAAGGT+AGG | + | chr4_3:73174829-73174848 | Msa0661700:intron | 45.0% | |
| CCTCAAAGTGAGAAAGCCAT+AGG | - | chr4_3:73175011-73175030 | None:intergenic | 45.0% | |
| CCTATGGCTTTCTCACTTTG+AGG | + | chr4_3:73175008-73175027 | Msa0661700:intron | 45.0% | |
| !!! | TTTTGGGGTTGGTTTCGGTT+TGG | + | chr4_3:73175126-73175145 | Msa0661700:intron | 45.0% |
| AGTCCCTCAAAAATCCAGCT+TGG | - | chr4_3:73175357-73175376 | None:intergenic | 45.0% | |
| TGGTTGTTTGCATAACTGGG+TGG | + | chr4_3:73175380-73175399 | Msa0661700:intron | 45.0% | |
| TCACAAAGAGGTGATACAGG+GGG | + | chr4_3:73175560-73175579 | Msa0661700:intron | 45.0% | |
| CATACCTACCTCTTTCTGAG+AGG | + | chr4_3:73175673-73175692 | Msa0661700:intron | 45.0% | |
| AACCACTATCAGTGGACCTA+CGG | - | chr4_3:73175728-73175747 | None:intergenic | 45.0% | |
| CTTAGACTTTGTCCCCATCA+TGG | - | chr4_3:73175893-73175912 | None:intergenic | 45.0% | |
| GAGAATCTCTTTACGATGCG+TGG | - | chr4_3:73175934-73175953 | None:intergenic | 45.0% | |
| ATGCAAACCAAGAGGTCGTA+AGG | - | chr4_3:73176132-73176151 | None:intergenic | 45.0% | |
| !! | GACCTCTTGGTTTGCATTCA+CGG | + | chr4_3:73176135-73176154 | Msa0661700:intron | 45.0% |
| AACCGTGAATGCAAACCAAG+AGG | - | chr4_3:73176140-73176159 | None:intergenic | 45.0% | |
| CGATGCTATTGTGTACCCAA+CGG | - | chr4_3:73176281-73176300 | None:intergenic | 45.0% | |
| !! | AAGAAGAGTATCGTTCCGCT+AGG | + | chr4_3:73176698-73176717 | Msa0661700:intron | 45.0% |
| !! | AGAAGAGTATCGTTCCGCTA+GGG | + | chr4_3:73176699-73176718 | Msa0661700:intron | 45.0% |
| ACTTTCATCGGAAAGGTGAG+GGG | - | chr4_3:73176932-73176951 | None:intergenic | 45.0% | |
| GACTTTCATCGGAAAGGTGA+GGG | - | chr4_3:73176933-73176952 | None:intergenic | 45.0% | |
| TCACCTTTCCGATGAAAGTC+CGG | + | chr4_3:73176933-73176952 | Msa0661700:intron | 45.0% | |
| AACTCTCACCGGACTTTCAT+CGG | - | chr4_3:73176944-73176963 | None:intergenic | 45.0% | |
| TCATGTCAGCGAAATAGGCT+TGG | - | chr4_3:73176979-73176998 | None:intergenic | 45.0% | |
| TCAAACTGTGGAAGCGAAAG+CGG | - | chr4_3:73177170-73177189 | None:intergenic | 45.0% | |
| CTAGATTCACCGTCTTAACG+TGG | - | chr4_3:73177204-73177223 | None:intergenic | 45.0% | |
| AAAGCTGCAACGGAGTAACT+TGG | + | chr4_3:73177501-73177520 | Msa0661700:intron | 45.0% | |
| AAGCTGCAACGGAGTAACTT+GGG | + | chr4_3:73177502-73177521 | Msa0661700:intron | 45.0% | |
| AAAAGCAGCAAAAGTGGTCC+TGG | + | chr4_3:73177532-73177551 | Msa0661700:intron | 45.0% | |
| TCTCTACCAAGTCAGAAGCT+TGG | - | chr4_3:73177597-73177616 | None:intergenic | 45.0% | |
| TGGAGCAAAAGAAAGAGGAC+TGG | - | chr4_3:73177664-73177683 | None:intergenic | 45.0% | |
| CAAAGTACATGGGCAAGTTG+AGG | - | chr4_3:73178080-73178099 | None:intergenic | 45.0% | |
| AAAGTGACTGACTACGCCAA+AGG | - | chr4_3:73178127-73178146 | None:intergenic | 45.0% | |
| !! | GAGTTGCTGGTTAAGTTGGT+AGG | + | chr4_3:73178236-73178255 | Msa0661700:intron | 45.0% |
| AAGTCAGGATTTGGCACCTA+AGG | + | chr4_3:73178334-73178353 | Msa0661700:intron | 45.0% | |
| AGTCAGGATTTGGCACCTAA+GGG | + | chr4_3:73178335-73178354 | Msa0661700:intron | 45.0% | |
| TAGATGGCTGAGATGAAGGT+AGG | - | chr4_3:73178568-73178587 | None:intergenic | 45.0% | |
| ! | TTGCATTGCGACCACTCTTT+TGG | + | chr4_3:73178645-73178664 | Msa0661700:intron | 45.0% |
| ! | ATTGCGACCACTCTTTTGGT+TGG | + | chr4_3:73178649-73178668 | Msa0661700:intron | 45.0% |
| AATGAGGCCAACCAAAAGAG+TGG | - | chr4_3:73178659-73178678 | None:intergenic | 45.0% | |
| TTATGTGCAGTAGGAGGGAT+AGG | + | chr4_3:73178751-73178770 | Msa0661700:intron | 45.0% | |
| GACCCTGTGTAACTAACTGA+TGG | + | chr4_3:73178796-73178815 | Msa0661700:intron | 45.0% | |
| CTGCCATCAGTTAGTTACAC+AGG | - | chr4_3:73178802-73178821 | None:intergenic | 45.0% | |
| TAATGGGACCATTCCAGACA+AGG | - | chr4_3:73179052-73179071 | None:intergenic | 45.0% | |
| GACATTTCGGATGATGCCTA+TGG | + | chr4_3:73179471-73179490 | Msa0661700:CDS | 45.0% | |
| ACGCTTCCTCTCATTAGACA+TGG | - | chr4_3:73179536-73179555 | None:intergenic | 45.0% | |
| ATGTCTAATGAGAGGAAGCG+TGG | + | chr4_3:73179535-73179554 | Msa0661700:exon | 45.0% | |
| ! | TAATGAGAGGAAGCGTGGAT+GGG | + | chr4_3:73179540-73179559 | Msa0661700:exon | 45.0% |
| !!! | TTCAAATTTTTTTTTTTTTT+TGG | + | chr4_3:73174420-73174439 | Msa0661700:intron | 5.0% |
| !!! | TCAAATTTTTTTTTTTTTTT+GGG | + | chr4_3:73174421-73174440 | Msa0661700:intron | 5.0% |
| !!! | TTCTCCGCCGTGCTTTTTTC+AGG | + | chr4_3:73171456-73171475 | Msa0661700:five_prime_UTR | 50.0% |
| ATCCGAGAAGACTTCCTACG+AGG | - | chr4_3:73172462-73172481 | None:intergenic | 50.0% | |
| ! | CTCCGCGTAGGAAGTCTTTT+TGG | + | chr4_3:73172551-73172570 | Msa0661700:intron | 50.0% |
| GGGAGAATGGCACCAACATA+TGG | - | chr4_3:73172683-73172702 | None:intergenic | 50.0% | |
| TGTTAAATGGGGCGGGAGAA+TGG | - | chr4_3:73172696-73172715 | None:intergenic | 50.0% | |
| ATGCTTCTCCTAAGTGTGGG+GGG | - | chr4_3:73173133-73173152 | None:intergenic | 50.0% | |
| !! | AGGTCCATAGTGGACTTTGG+AGG | + | chr4_3:73173267-73173286 | Msa0661700:intron | 50.0% |
| ! | AGCACCGAGCAACAAAGACA+AGG | - | chr4_3:73173377-73173396 | None:intergenic | 50.0% |
| ATAATGATGAACGGCGGGCA+TGG | - | chr4_3:73173425-73173444 | None:intergenic | 50.0% | |
| !! | TTCCACCGGCTTCTTGTTCA+TGG | + | chr4_3:73173448-73173467 | Msa0661700:intron | 50.0% |
| !! | TGATGGTGGTGATAAAGCGG+AGG | - | chr4_3:73173490-73173509 | None:intergenic | 50.0% |
| !! | GGGTTTTGTGTGCGAAAGGT+TGG | + | chr4_3:73174229-73174248 | Msa0661700:intron | 50.0% |
| !! | GGTTGGTTTAGTGATGGGGT+TGG | + | chr4_3:73174246-73174265 | Msa0661700:intron | 50.0% |
| ACTCTAAACGAGCGCTTCGT+GGG | - | chr4_3:73174693-73174712 | None:intergenic | 50.0% | |
| !! | GGTTGGTTTCGGTTTGGTCT+AGG | + | chr4_3:73175132-73175151 | Msa0661700:intron | 50.0% |
| !! | TGGTTTCGGTTTGGTCTAGG+AGG | + | chr4_3:73175135-73175154 | Msa0661700:intron | 50.0% |
| ! | GGTTTGGTCTAGGAGGACTT+CGG | + | chr4_3:73175142-73175161 | Msa0661700:intron | 50.0% |
| TGAGGAAGTAGCCACCTGTT+GGG | + | chr4_3:73175172-73175191 | Msa0661700:intron | 50.0% | |
| TTCTCAAGTACCCCAACAGG+TGG | - | chr4_3:73175186-73175205 | None:intergenic | 50.0% | |
| GACTTCTCAAGTACCCCAAC+AGG | - | chr4_3:73175189-73175208 | None:intergenic | 50.0% | |
| TTCAAGCTCTTGGAGCTGCT+CGG | + | chr4_3:73175298-73175317 | Msa0661700:intron | 50.0% | |
| TCACCCTCTCAGAAAGAGGT+AGG | - | chr4_3:73175680-73175699 | None:intergenic | 50.0% | |
| ! | ACCTCTTTCTGAGAGGGTGA+AGG | + | chr4_3:73175680-73175699 | Msa0661700:intron | 50.0% |
| TCCTTCACCCTCTCAGAAAG+AGG | - | chr4_3:73175684-73175703 | None:intergenic | 50.0% | |
| GGGTGAAGGAGCAACATTAG+TGG | + | chr4_3:73175694-73175713 | Msa0661700:intron | 50.0% | |
| ATTAGTGGTGTCCCTTCCGT+AGG | + | chr4_3:73175709-73175728 | Msa0661700:intron | 50.0% | |
| CTATCAGTGGACCTACGGAA+GGG | - | chr4_3:73175723-73175742 | None:intergenic | 50.0% | |
| ACTATCAGTGGACCTACGGA+AGG | - | chr4_3:73175724-73175743 | None:intergenic | 50.0% | |
| TTCCGTAGGTCCACTGATAG+TGG | + | chr4_3:73175723-73175742 | Msa0661700:intron | 50.0% | |
| TATGTTGATGCAGCTGCAGG+TGG | - | chr4_3:73175809-73175828 | None:intergenic | 50.0% | |
| GCTCTTCCCCCTAAGGAAAA+AGG | + | chr4_3:73176094-73176113 | Msa0661700:intron | 50.0% | |
| TTTCAACAACTCCCCGGCAA+CGG | + | chr4_3:73176617-73176636 | Msa0661700:intron | 50.0% | |
| GGACTTTCATCGGAAAGGTG+AGG | - | chr4_3:73176934-73176953 | None:intergenic | 50.0% | |
| TCACCGGACTTTCATCGGAA+AGG | - | chr4_3:73176939-73176958 | None:intergenic | 50.0% | |
| ACCAAGTCAGAAGCTTGGCA+CGG | - | chr4_3:73177592-73177611 | None:intergenic | 50.0% | |
| GTCAGGATTTGGCACCTAAG+GGG | + | chr4_3:73178336-73178355 | Msa0661700:intron | 50.0% | |
| TCAGGTACACCAGTAGAAGC+AGG | - | chr4_3:73178528-73178547 | None:intergenic | 50.0% | |
| CACACGCAGTGAAAAGCAAC+AGG | + | chr4_3:73179281-73179300 | Msa0661700:intron | 50.0% | |
| GGTTCGTGTGAGATCCAAGA+AGG | + | chr4_3:73179302-73179321 | Msa0661700:CDS | 50.0% | |
| ! | TGAATGAGGCACTTGCAGCA+TGG | + | chr4_3:73179343-73179362 | Msa0661700:CDS | 50.0% |
| ! | GAATGAGGCACTTGCAGCAT+GGG | + | chr4_3:73179344-73179363 | Msa0661700:CDS | 50.0% |
| ! | AAGAGCTGATAGGAGTGCAG+AGG | + | chr4_3:73179383-73179402 | Msa0661700:CDS | 50.0% |
| ! | CTAATGAGAGGAAGCGTGGA+TGG | + | chr4_3:73179539-73179558 | Msa0661700:exon | 50.0% |
| GGATGGGTACTTAGGCTCTA+AGG | + | chr4_3:73179556-73179575 | Msa0661700:three_prime_UTR | 50.0% | |
| AGATCGTGGAAGAATCGCGG+TGG | - | chr4_3:73171385-73171404 | None:intergenic | 55.0% | |
| CGGAGATCGTGGAAGAATCG+CGG | - | chr4_3:73171388-73171407 | None:intergenic | 55.0% | |
| AAGAATCACGGCGGAGATCG+TGG | - | chr4_3:73171399-73171418 | None:intergenic | 55.0% | |
| ! | AGAATCATGGCGGAGAACGG+TGG | - | chr4_3:73171430-73171449 | None:intergenic | 55.0% |
| ACAAGGGGCTGCAGATGCTT+AGG | + | chr4_3:73172426-73172445 | Msa0661700:intron | 55.0% | |
| GGCACCAACATATGGGGGAA+AGG | - | chr4_3:73172675-73172694 | None:intergenic | 55.0% | |
| TGCTTCTCCTAAGTGTGGGG+GGG | - | chr4_3:73173132-73173151 | None:intergenic | 55.0% | |
| CACCATGAACAAGAAGCCGG+TGG | - | chr4_3:73173453-73173472 | None:intergenic | 55.0% | |
| GGTGGTGATAAAGCGGAGGT+AGG | - | chr4_3:73173486-73173505 | None:intergenic | 55.0% | |
| GACTCTAAACGAGCGCTTCG+TGG | - | chr4_3:73174694-73174713 | None:intergenic | 55.0% | |
| TTGGTCTAGGAGGACTTCGG+AGG | + | chr4_3:73175145-73175164 | Msa0661700:intron | 55.0% | |
| GAGGACTTCGGAGGATTGTG+AGG | + | chr4_3:73175154-73175173 | Msa0661700:intron | 55.0% | |
| GTGAGGAAGTAGCCACCTGT+TGG | + | chr4_3:73175171-73175190 | Msa0661700:intron | 55.0% | |
| GAGGAAGTAGCCACCTGTTG+GGG | + | chr4_3:73175173-73175192 | Msa0661700:intron | 55.0% | |
| CAAAGAGGTGATACAGGGGG+AGG | + | chr4_3:73175563-73175582 | Msa0661700:intron | 55.0% | |
| TAGGGGGAAGAGCTAGTGCT+TGG | - | chr4_3:73176087-73176106 | None:intergenic | 55.0% | |
| ! | AGCACTAGCTCTTCCCCCTA+AGG | + | chr4_3:73176087-73176106 | Msa0661700:intron | 55.0% |
| AGTGCAGCCTTACGACCTCT+TGG | + | chr4_3:73176122-73176141 | Msa0661700:intron | 55.0% | |
| !!! | AAGTTTTTGGCGCCGTTGCC+GGG | - | chr4_3:73176632-73176651 | None:intergenic | 55.0% |
| !!! | CAAGTTTTTGGCGCCGTTGC+CGG | - | chr4_3:73176633-73176652 | None:intergenic | 55.0% |
| TCGGAAAGGTGAGGGGCTAA+GGG | - | chr4_3:73176925-73176944 | None:intergenic | 55.0% | |
| ATCGGAAAGGTGAGGGGCTA+AGG | - | chr4_3:73176926-73176945 | None:intergenic | 55.0% | |
| CGAGAGCGGAGTCTTGATGT+TGG | - | chr4_3:73177099-73177118 | None:intergenic | 55.0% | |
| ACTGTGGAAGCGAAAGCGGA+GGG | - | chr4_3:73177166-73177185 | None:intergenic | 55.0% | |
| AACTGTGGAAGCGAAAGCGG+AGG | - | chr4_3:73177167-73177186 | None:intergenic | 55.0% | |
| AGCAGCAAAAGTGGTCCTGG+AGG | + | chr4_3:73177535-73177554 | Msa0661700:intron | 55.0% | |
| GCAGCAAAAGTGGTCCTGGA+GGG | + | chr4_3:73177536-73177555 | Msa0661700:intron | 55.0% | |
| TGCAGGCGCAACAAATGAGG+AGG | - | chr4_3:73178466-73178485 | None:intergenic | 55.0% | |
| GGTTGCAGGCGCAACAAATG+AGG | - | chr4_3:73178469-73178488 | None:intergenic | 55.0% | |
| TGCGCCTGCAACCTCTTCAT+CGG | + | chr4_3:73178476-73178495 | Msa0661700:CDS | 55.0% | |
| AGTAGAAGCAGGAGCAACCG+AGG | - | chr4_3:73178517-73178536 | None:intergenic | 55.0% | |
| TCGGTTGCTCCTGCTTCTAC+TGG | + | chr4_3:73178516-73178535 | Msa0661700:CDS | 55.0% | |
| TGTACCTGACACTGCTGCAC+AGG | + | chr4_3:73178539-73178558 | Msa0661700:CDS | 55.0% | |
| GATACCTGTGCAGCAGTGTC+AGG | - | chr4_3:73178546-73178565 | None:intergenic | 55.0% | |
| TGTGCAGTAGGAGGGATAGG+AGG | + | chr4_3:73178754-73178773 | Msa0661700:intron | 55.0% | |
| GTGCAGTAGGAGGGATAGGA+GGG | + | chr4_3:73178755-73178774 | Msa0661700:intron | 55.0% | |
| ! | GGAAGCGTGGATGGGTACTT+AGG | + | chr4_3:73179548-73179567 | Msa0661700:three_prime_UTR | 55.0% |
| ATTAGGCCCCCCCCACACTT+AGG | + | chr4_3:73173122-73173141 | Msa0661700:intron | 60.0% | |
| GCTTCTCCTAAGTGTGGGGG+GGG | - | chr4_3:73173131-73173150 | None:intergenic | 60.0% | |
| CGGCCGTGCCAACATTAGCA+CGG | + | chr4_3:73174457-73174476 | Msa0661700:intron | 60.0% | |
| GGCCGTGCCAACATTAGCAC+GGG | + | chr4_3:73174458-73174477 | Msa0661700:intron | 60.0% | |
| GGCCCGTGCTAATGTTGGCA+CGG | - | chr4_3:73174463-73174482 | None:intergenic | 60.0% | |
| CTAAACGAGCGCTTCGTGGG+AGG | - | chr4_3:73174690-73174709 | None:intergenic | 60.0% | |
| !!! | AGTTTTTGGCGCCGTTGCCG+GGG | - | chr4_3:73176631-73176650 | None:intergenic | 60.0% |
| AGAGCCAAACCGCAAGCGCA+CGG | + | chr4_3:73176655-73176674 | Msa0661700:intron | 60.0% | |
| TTCGATAGGCCGTGCGCTTG+CGG | - | chr4_3:73176667-73176686 | None:intergenic | 60.0% | |
| GGTGAGGGGCTAAGGGAAAC+CGG | - | chr4_3:73176918-73176937 | None:intergenic | 60.0% | |
| GCAAAAGTGGTCCTGGAGGG+TGG | + | chr4_3:73177539-73177558 | Msa0661700:intron | 60.0% | |
| GCCGTGCCAAGCTTCTGACT+TGG | + | chr4_3:73177588-73177607 | Msa0661700:intron | 60.0% | |
| GGCGCAACAAATGAGGAGGC+AGG | - | chr4_3:73178462-73178481 | None:intergenic | 60.0% | |
| GCGACCGATGAAGAGGTTGC+AGG | - | chr4_3:73178483-73178502 | None:intergenic | 60.0% | |
| AGAAGCAGGAGCAACCGAGG+AGG | - | chr4_3:73178514-73178533 | None:intergenic | 60.0% | |
| GGCACGGCCCGTGCTAATGT+TGG | - | chr4_3:73174468-73174487 | None:intergenic | 65.0% | |
| TAGGCCGTGCGCTTGCGGTT+TGG | - | chr4_3:73176662-73176681 | None:intergenic | 65.0% | |
| AGTGGTCCTGGAGGGTGGCA+CGG | + | chr4_3:73177544-73177563 | Msa0661700:intron | 65.0% | |
| GGCCGTGCCACATGTTGGCA+CGG | + | chr4_3:73177565-73177584 | Msa0661700:intron | 65.0% | |
| GCCGTGCCACATGTTGGCAC+GGG | + | chr4_3:73177566-73177585 | Msa0661700:intron | 65.0% | |
| GCCCGTGCCAACATGTGGCA+CGG | - | chr4_3:73177570-73177589 | None:intergenic | 65.0% | |
| GAGGCAGGAGCAGCGAAACG+TGG | - | chr4_3:73178447-73178466 | None:intergenic | 65.0% | |
| AGCAGGAGCAACCGAGGAGG+AGG | - | chr4_3:73178511-73178530 | None:intergenic | 65.0% | |
| GGCACGGCCGTGCCACATGT+TGG | + | chr4_3:73177560-73177579 | Msa0661700:intron | 70.0% | |
| GCACGGCCCGTGCCAACATG+TGG | - | chr4_3:73177575-73177594 | None:intergenic | 70.0% | |
| GGCAGGCGCGACCGATGAAG+AGG | - | chr4_3:73178490-73178509 | None:intergenic | 70.0% | |
| GGAGCAACCGAGGAGGAGGC+AGG | - | chr4_3:73178507-73178526 | None:intergenic | 70.0% | |
| GGTCGCGCCTGCCTCCTCCT+CGG | + | chr4_3:73178497-73178516 | Msa0661700:CDS | 75.0% | |
| ! | GCACGGCCGTGCCACCCTCC+AGG | - | chr4_3:73177553-73177572 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 73171338 | 73179846 | 73171338 | ID=Msa0661700;Name=Msa0661700 |
| chr4_3 | mRNA | 73171338 | 73179846 | 73171338 | ID=Msa0661700-mRNA-1;Parent=Msa0661700;Name=Msa0661700-mRNA-1;_AED=0.09;_eAED=0.09;_QI=199|1|1|1|0.5|0.33|3|304|137 |
| chr4_3 | exon | 73171338 | 73171477 | 73171338 | ID=Msa0661700-mRNA-1:exon:22010;Parent=Msa0661700-mRNA-1 |
| chr4_3 | exon | 73178341 | 73178560 | 73178341 | ID=Msa0661700-mRNA-1:exon:22011;Parent=Msa0661700-mRNA-1 |
| chr4_3 | exon | 73179290 | 73179846 | 73179290 | ID=Msa0661700-mRNA-1:exon:22012;Parent=Msa0661700-mRNA-1 |
| chr4_3 | five_prime_UTR | 73171338 | 73171477 | 73171338 | ID=Msa0661700-mRNA-1:five_prime_utr;Parent=Msa0661700-mRNA-1 |
| chr4_3 | five_prime_UTR | 73178341 | 73178399 | 73178341 | ID=Msa0661700-mRNA-1:five_prime_utr;Parent=Msa0661700-mRNA-1 |
| chr4_3 | CDS | 73178400 | 73178560 | 73178400 | ID=Msa0661700-mRNA-1:cds;Parent=Msa0661700-mRNA-1 |
| chr4_3 | CDS | 73179290 | 73179542 | 73179290 | ID=Msa0661700-mRNA-1:cds;Parent=Msa0661700-mRNA-1 |
| chr4_3 | three_prime_UTR | 73179543 | 73179846 | 73179543 | ID=Msa0661700-mRNA-1:three_prime_utr;Parent=Msa0661700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
