AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0639120


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0639120 MtrunA17_Chr4g0050521 98.448 451 6 1 1 450 1 451 0.0 917
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0639120 AT2G13840.1 62.619 420 151 3 31 448 17 432 0.0 541

Find 123 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATCTCTTGTTGATGATTT+TGG 0.031208 4_3:-34762924 Msa0639120:CDS
CAAACCTTGTAATTGTTTCT+AGG 0.169257 4_3:+34759735 None:intergenic
AACAAATTTAACAATAAAAT+TGG 0.172762 4_3:+34759471 None:intergenic
TTGATCATTGTTTACCTCTT+TGG 0.224468 4_3:-34759658 Msa0639120:CDS
CCTTACAGTGAAGGGATCTT+TGG 0.253884 4_3:+34763281 None:intergenic
AAAATCCTGTTGCTATTATT+AGG 0.255436 4_3:-34761179 Msa0639120:CDS
CACTTCCCAGTTCAGATTCA+TGG 0.274753 4_3:+34759870 None:intergenic
CCTCATTTCTCTTCATATAT+AGG 0.280119 4_3:-34763245 Msa0639120:five_prime_UTR
CTATATGGTGCAATGCTATA+AGG 0.299389 4_3:-34759799 Msa0639120:CDS
CAATGCTATAAGGGAATTAT+TGG 0.306066 4_3:-34759789 Msa0639120:CDS
GATGACCCATGAACAAGTTT+TGG 0.306632 4_3:-34763003 Msa0639120:CDS
CGGGCTACATGGAGCCTTCC+GGG 0.310253 4_3:+34761457 None:intergenic
GTAGAATCGGCTCGCAAATA+TGG 0.314220 4_3:-34762177 Msa0639120:CDS
AAAAGTGATGGAAGGCTTGC+AGG 0.316738 4_3:-34761117 Msa0639120:intron
TTAAGGTAGCTAGGCCTATA+TGG 0.320672 4_3:-34759814 Msa0639120:CDS
CTAGAAACAATTACAAGGTT+TGG 0.330990 4_3:-34759734 Msa0639120:CDS
TGTAACTGAATGGGTTTCAT+TGG 0.360755 4_3:-34762970 Msa0639120:CDS
TAAAAGCCAAAACTTGTTCA+TGG 0.361148 4_3:+34762997 None:intergenic
TAGAAACAATTACAAGGTTT+GGG 0.368543 4_3:-34759733 Msa0639120:CDS
TTGCCGTTCTGGCTCATCCA+TGG 0.379810 4_3:-34761209 Msa0639120:CDS
GAGCATGTTTGTAGGATTGC+AGG 0.382471 4_3:-34761493 Msa0639120:CDS
TTCCAACGTTTCTACCAGTC+AGG 0.399060 4_3:-34759582 Msa0639120:CDS
TTAGCATATTACAGCAGTAT+TGG 0.401822 4_3:-34761631 Msa0639120:CDS
GCGATACCATCTCCCATAAC+TGG 0.402455 4_3:+34763113 None:intergenic
AGGACACCATGAATCTGAAC+TGG 0.403868 4_3:-34759876 Msa0639120:CDS
GATGAAGTAGCGAAAGAAGA+AGG 0.406465 4_3:+34762942 None:intergenic
AACCTCCTAATAATAGCAAC+AGG 0.413958 4_3:+34761174 None:intergenic
TAATATGCTAAAACGTGAAC+AGG 0.417023 4_3:+34761643 None:intergenic
AAGGGTGAGTGAGTTTGTTA+CGG 0.421407 4_3:+34763207 None:intergenic
TTAAATGGGAGCATGTTTGT+AGG 0.422997 4_3:-34761501 Msa0639120:CDS
CCAAAGATCCCTTCACTGTA+AGG 0.423262 4_3:-34763281 Msa0639120:five_prime_UTR
TTAAAAGAAGCAGGCCTTCA+TGG 0.425114 4_3:-34761153 Msa0639120:CDS
CTTATAGCATTGCACCATAT+AGG 0.426022 4_3:+34759800 None:intergenic
CAATTCAAACAAGAGCAATA+AGG 0.426821 4_3:-34763075 Msa0639120:CDS
GATGGAAAATGAAGAGTTTG+AGG 0.430917 4_3:-34759621 Msa0639120:CDS
ACGGGCTACATGGAGCCTTC+CGG 0.436221 4_3:+34761456 None:intergenic
CAAATCCTTTCCACAATACA+AGG 0.438699 4_3:+34759682 None:intergenic
TATATGGTGCAATGCTATAA+GGG 0.441866 4_3:-34759798 Msa0639120:CDS
TTCTAAGTCTCTATGAGAAC+CGG 0.445315 4_3:+34759551 None:intergenic
AAGTCATGCAAAACTAGTAC+TGG 0.451309 4_3:+34759839 None:intergenic
CAACCATAGCACGGGCTACA+TGG 0.457224 4_3:+34761446 None:intergenic
CGAGCCGATTCTACAGCCTC+GGG 0.458504 4_3:+34762186 None:intergenic
AGGGTGAGTGAGTTTGTTAC+GGG 0.459051 4_3:+34763208 None:intergenic
GCTCTCTCAACAACCTTAGA+AGG 0.460070 4_3:+34762816 None:intergenic
TCTGACAGATCACGATACTA+TGG 0.460637 4_3:-34762217 Msa0639120:CDS
TGCCGTTCTGGCTCATCCAT+GGG 0.473635 4_3:-34761208 Msa0639120:CDS
CATCCCCGAGGCTGTAGAAT+CGG 0.477174 4_3:-34762190 Msa0639120:CDS
ATGACTTTCTTAAGGTAGCT+AGG 0.478259 4_3:-34759823 Msa0639120:CDS
ATTAGGAGGTTAAAAGAAGC+AGG 0.481000 4_3:-34761162 Msa0639120:CDS
TTTATTGCTTCCTCCACCAC+AGG 0.488429 4_3:+34761255 None:intergenic
AACCGGAGTTCCTCCCTGAC+TGG 0.502354 4_3:+34759568 None:intergenic
AAAAGCCAAAACTTGTTCAT+GGG 0.503915 4_3:+34762998 None:intergenic
TAAAACTTACGCCGTTCATG+TGG 0.507053 4_3:+34762793 None:intergenic
CTCAATCCAGTTATGGGAGA+TGG 0.507268 4_3:-34763119 Msa0639120:exon
TTGGTTAAGTAGCCAAGAGA+TGG 0.514042 4_3:-34759639 Msa0639120:CDS
TATTGGACCATCAAAATTTG+AGG 0.515732 4_3:-34761614 Msa0639120:CDS
GGGAAGTGAACCTGTGGTGG+AGG 0.520171 4_3:-34761265 Msa0639120:CDS
ATGAAGTAGCGAAAGAAGAA+GGG 0.523100 4_3:+34762943 None:intergenic
GAAGAGAAATGAGGAAGGGT+AGG 0.523647 4_3:+34763254 None:intergenic
TGTAGACCTCCATCCCATGA+AGG 0.525586 4_3:+34761139 None:intergenic
TAAAAGAAGCAGGCCTTCAT+GGG 0.526089 4_3:-34761152 Msa0639120:CDS
TTCACCCTTGTATTGTGGAA+AGG 0.529199 4_3:-34759687 Msa0639120:CDS
ATTGGAGGGTCAGACTATCA+TGG 0.530154 4_3:-34759905 Msa0639120:CDS
GCGAGCCGATTCTACAGCCT+CGG 0.530385 4_3:+34762185 None:intergenic
GCCCGTGCTATGGTTGAAGC+AGG 0.533657 4_3:-34761439 Msa0639120:CDS
GCTCCATGTAGCCCGTGCTA+TGG 0.537065 4_3:-34761449 Msa0639120:CDS
AACGTTGGAAAGCTTCAACT+TGG 0.537287 4_3:+34759595 None:intergenic
CTCTTCATATATAGGTTCAG+AGG 0.537326 4_3:-34763237 Msa0639120:five_prime_UTR
CAGGGGAAGTGAACCTGTGG+TGG 0.538470 4_3:-34761268 Msa0639120:CDS
AACAATAATATCAGAAACGT+TGG 0.540630 4_3:+34759387 None:intergenic
TACCAGTCAGGGAGGAACTC+CGG 0.543925 4_3:-34759570 Msa0639120:CDS
AGAAGCAGGCCTTCATGGGA+TGG 0.546814 4_3:-34761148 Msa0639120:CDS
GGAGGTTCACCCTTGTATTG+TGG 0.547408 4_3:-34759692 Msa0639120:CDS
AAGAAGAATAAGAACAGAGG+TGG 0.548356 4_3:-34763038 Msa0639120:CDS
CTAACCTAGAAACAATTACA+AGG 0.549045 4_3:-34759739 Msa0639120:CDS
GTTAGTATTAGACGGTTCCT+CGG 0.549211 4_3:+34759757 None:intergenic
ATCCTGTTGCTATTATTAGG+AGG 0.550357 4_3:-34761176 Msa0639120:CDS
GCAGGCAACGGAGTTGCTCC+CGG 0.551611 4_3:-34761475 Msa0639120:CDS
ATTGTACTAACTTCAACACC+TGG 0.552254 4_3:+34762141 None:intergenic
GAAGGGATCTTTGGAGTCAC+AGG 0.552421 4_3:+34763290 None:intergenic
GTTTCTAGGTTAGTATTAGA+CGG 0.556827 4_3:+34759749 None:intergenic
GGGTCAGACTATCATGGAAG+AGG 0.560598 4_3:-34759899 Msa0639120:CDS
CAATATTACTTGGAGTAAGC+AGG 0.571257 4_3:+34761364 None:intergenic
AAGAAGAAGAATAAGAACAG+AGG 0.572930 4_3:-34763041 Msa0639120:CDS
ATGGAGGTCTACAAAAGTGA+TGG 0.578050 4_3:-34761129 Msa0639120:CDS
TCCCTGACTGGTAGAAACGT+TGG 0.579843 4_3:+34759580 None:intergenic
ACCTGCTTCAACCATAGCAC+GGG 0.581188 4_3:+34761438 None:intergenic
AACCTGCTTCAACCATAGCA+CGG 0.582016 4_3:+34761437 None:intergenic
TTTGGGGTGCAGAAGCCTGT+TGG 0.583868 4_3:-34762906 Msa0639120:CDS
GTTTGTAGGATTGCAGGCAA+CGG 0.584225 4_3:-34761487 Msa0639120:CDS
TCCAACGTTTCTACCAGTCA+GGG 0.584764 4_3:-34759581 Msa0639120:CDS
TATGGCATTAAGATAATCCC+AGG 0.585730 4_3:-34762159 Msa0639120:CDS
GTTGAGAGAGCCCACATGAA+CGG 0.586954 4_3:-34762804 Msa0639120:CDS
CCTATATATGAAGAGAAATG+AGG 0.589138 4_3:+34763245 None:intergenic
AGTGACCTGGCTGATGCCTA+CGG 0.590587 4_3:-34759938 Msa0639120:CDS
CAAAGATCCCTTCACTGTAA+GGG 0.590742 4_3:-34763280 Msa0639120:five_prime_UTR
TGTCACTCTAAATGCAGTGA+TGG 0.597504 4_3:-34762849 Msa0639120:CDS
TGCCCATGGATGAGCCAGAA+CGG 0.598033 4_3:+34761206 None:intergenic
ACAGATCACGATACTATGGC+AGG 0.600390 4_3:-34762213 Msa0639120:CDS
GCAACGGAGTTGCTCCCGGA+AGG 0.600663 4_3:-34761471 Msa0639120:CDS
TAGGTTACCCTTACAGTGAA+GGG 0.603982 4_3:+34763273 None:intergenic
AAAGGCCGTAGGCATCAGCC+AGG 0.611891 4_3:+34759933 None:intergenic
GTAGGTTACCCTTACAGTGA+AGG 0.613045 4_3:+34763272 None:intergenic
TATATGAAGAGAAATGAGGA+AGG 0.613178 4_3:+34763249 None:intergenic
ATATGAAGAGAAATGAGGAA+GGG 0.626865 4_3:+34763250 None:intergenic
AGCAGGCCTTCATGGGATGG+AGG 0.629146 4_3:-34761145 Msa0639120:CDS
TCAGACTATCATGGAAGAGG+AGG 0.633037 4_3:-34759896 Msa0639120:CDS
TGGTGGAGACACTGAAGCAG+AGG 0.633552 4_3:-34761668 Msa0639120:CDS
CATGCAAAACTAGTACTGGA+AGG 0.634426 4_3:+34759843 None:intergenic
ATTATTGGAGTGTTATGCCG+AGG 0.638655 4_3:-34759774 Msa0639120:CDS
AGGTCTACAAAAGTGATGGA+AGG 0.642912 4_3:-34761125 Msa0639120:CDS
TTGTACTAACTTCAACACCT+GGG 0.643477 4_3:+34762142 None:intergenic
TCTTGGCTACTTAACCAAAG+AGG 0.654559 4_3:+34759644 None:intergenic
AAAACTTACGCCGTTCATGT+GGG 0.655200 4_3:+34762794 None:intergenic
TTATCTTCGAGCAAAGAACA+TGG 0.660434 4_3:-34761554 Msa0639120:CDS
TTTCAGGGGAAGTGAACCTG+TGG 0.661634 4_3:-34761271 Msa0639120:intron
GTATGCAGCATATAGTGACC+TGG 0.671490 4_3:-34759951 Msa0639120:intron
GGACACCATGAATCTGAACT+GGG 0.676928 4_3:-34759875 Msa0639120:CDS
AAATCCTTTCCACAATACAA+GGG 0.689638 4_3:+34759683 None:intergenic
TACTATGGCAGGCATCCCCG+AGG 0.703124 4_3:-34762202 Msa0639120:CDS
AACGTTTCTACCAGTCAGGG+AGG 0.703221 4_3:-34759578 Msa0639120:CDS
GAGCCGATTCTACAGCCTCG+GGG 0.740138 4_3:+34762187 None:intergenic
AAAATGATTTGTGATACTGG+GGG 0.788482 4_3:-34761234 Msa0639120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTGTTTGAATTATTTA+AGG - chr4_3:34759922-34759941 Msa0639120:CDS 10.0%
!!! ATTATGGTTATTATTTTATA+AGG - chr4_3:34760199-34760218 Msa0639120:intron 10.0%
!! AACAAATTTAACAATAAAAT+TGG + chr4_3:34763181-34763200 None:intergenic 10.0%
!!! AATTTTATTGTTAAATTTGT+TGG - chr4_3:34763180-34763199 Msa0639120:five_prime_UTR 10.0%
!!! AAAAAAGATTGAATTTTTTG+GGG + chr4_3:34759485-34759504 None:intergenic 15.0%
!!! GAAAAAAGATTGAATTTTTT+GGG + chr4_3:34759486-34759505 None:intergenic 15.0%
!!! AGAAAAAAGATTGAATTTTT+TGG + chr4_3:34759487-34759506 None:intergenic 15.0%
!!! TTTTAAATTTGTAACTGAAT+GGG - chr4_3:34759670-34759689 Msa0639120:CDS 15.0%
!!! ACAGTTTTTTTTGTTTTAAT+TGG + chr4_3:34759978-34759997 None:intergenic 15.0%
!! AATATGTAATGAATATAAGA+AGG + chr4_3:34760079-34760098 None:intergenic 15.0%
!! TTAATTAGAATCAATTATGA+AGG - chr4_3:34760843-34760862 Msa0639120:intron 15.0%
!!! TTTTTTCTTAACTACAAAAA+TGG + chr4_3:34761340-34761359 None:intergenic 15.0%
!!! TTTTTGTAGTTAAGAAAAAA+TGG - chr4_3:34761340-34761359 Msa0639120:intron 15.0%
!!! ATTTTTTATGTTTCCAAAAT+CGG + chr4_3:34762446-34762465 None:intergenic 15.0%
!!! CTTTTAAATTTGTAACTGAA+TGG - chr4_3:34759669-34759688 Msa0639120:CDS 20.0%
!!! TTTAAGGTTGTTTTTATTGT+CGG - chr4_3:34759938-34759957 Msa0639120:CDS 20.0%
!!! TTAGTACAATATTTTATCCA+AGG - chr4_3:34760521-34760540 Msa0639120:intron 20.0%
!!! TATTTTGAATGAATCAATTC+TGG - chr4_3:34760692-34760711 Msa0639120:intron 20.0%
!!! AATTAACTTGAACTTGAAAT+TGG + chr4_3:34760829-34760848 None:intergenic 20.0%
!!! ATAAGTTTTTGTCAAACATA+AGG - chr4_3:34761064-34761083 Msa0639120:intron 20.0%
!!! TAAGTTTTTGTCAAACATAA+GGG - chr4_3:34761065-34761084 Msa0639120:intron 20.0%
!!! ATAAAAATGATTTGTGATAC+TGG - chr4_3:34761412-34761431 Msa0639120:CDS 20.0%
!!! TAAAAATGATTTGTGATACT+GGG - chr4_3:34761413-34761432 Msa0639120:CDS 20.0%
!!! CATAAAAAATCGTTATTTTG+CGG - chr4_3:34762456-34762475 Msa0639120:intron 20.0%
!!! TTTTGTTTTTTGATTGTCCT+AGG - chr4_3:34759886-34759905 Msa0639120:CDS 25.0%
! AAATAAATCTAAGCAATCCT+AGG + chr4_3:34759906-34759925 None:intergenic 25.0%
! ATGCGTTACAATCTAAATTA+CGG - chr4_3:34760103-34760122 Msa0639120:intron 25.0%
!! TGTGCATCATTTTATGATTA+TGG - chr4_3:34760183-34760202 Msa0639120:intron 25.0%
! AGGATAATGAAGTCAATTTA+AGG - chr4_3:34760219-34760238 Msa0639120:intron 25.0%
! TAATGAAGTCAATTTAAGGA+TGG - chr4_3:34760223-34760242 Msa0639120:intron 25.0%
!! TTTATTGCATTTTCCAAAGA+TGG - chr4_3:34760304-34760323 Msa0639120:intron 25.0%
!! ATTGATTTCCTTTGTAGTTT+AGG - chr4_3:34760357-34760376 Msa0639120:intron 25.0%
! CTTAAGTTTGAAAATTACCT+TGG + chr4_3:34760541-34760560 None:intergenic 25.0%
! GGACACATTTACATAAAATT+AGG - chr4_3:34760749-34760768 Msa0639120:intron 25.0%
!! CAATTGATTTAGTGTATGTT+TGG + chr4_3:34760905-34760924 None:intergenic 25.0%
! AAAGCTTAACAAGCTAAAAA+TGG - chr4_3:34761122-34761141 Msa0639120:CDS 25.0%
!! TTAAGCATCTTGTATTTTCA+GGG - chr4_3:34761363-34761382 Msa0639120:intron 25.0%
!! AAAAATGATTTGTGATACTG+GGG - chr4_3:34761414-34761433 Msa0639120:CDS 25.0%
!! AAAATCCTGTTGCTATTATT+AGG - chr4_3:34761470-34761489 Msa0639120:CDS 25.0%
! TCTCATAAAAACCAAAACTA+AGG - chr4_3:34761613-34761632 Msa0639120:CDS 25.0%
! TCACTAAATCTTACAATTTG+AGG + chr4_3:34761792-34761811 None:intergenic 25.0%
!!! CGATATAATAGTTTTAAACC+TGG - chr4_3:34761860-34761879 Msa0639120:intron 25.0%
! AATCGTCACTAAACAAAATT+GGG - chr4_3:34761906-34761925 Msa0639120:intron 25.0%
!! AAGAAAACTACCATTTGTTA+TGG + chr4_3:34762050-34762069 None:intergenic 25.0%
! TGGATGATAATTAGATTTGA+TGG - chr4_3:34762106-34762125 Msa0639120:intron 25.0%
! GGATGATAATTAGATTTGAT+GGG - chr4_3:34762107-34762126 Msa0639120:intron 25.0%
! AATCACTGTGATTTCATATA+TGG + chr4_3:34762234-34762253 None:intergenic 25.0%
!! AAGCGATAATTTTCAATACT+CGG - chr4_3:34762330-34762349 Msa0639120:intron 25.0%
!!! TGATCTTGCTTGTTAATTTT+TGG - chr4_3:34762676-34762695 Msa0639120:intron 25.0%
! TAGAAACAATTACAAGGTTT+GGG - chr4_3:34762916-34762935 Msa0639120:CDS 25.0%
! AACAATAATATCAGAAACGT+TGG + chr4_3:34763265-34763284 None:intergenic 25.0%
!!! TTGATGATTTTCTACACATT+TGG - chr4_3:34763298-34763317 Msa0639120:five_prime_UTR 25.0%
ATATGAAGAGAAATGAGGAA+GGG + chr4_3:34759402-34759421 None:intergenic 30.0%
TATATGAAGAGAAATGAGGA+AGG + chr4_3:34759403-34759422 None:intergenic 30.0%
CCTATATATGAAGAGAAATG+AGG + chr4_3:34759407-34759426 None:intergenic 30.0%
CCTCATTTCTCTTCATATAT+AGG - chr4_3:34759404-34759423 Msa0639120:three_prime_UTR 30.0%
!!! TTTTTTGGGGTAATTTTCTC+AGG + chr4_3:34759472-34759491 None:intergenic 30.0%
AAAAAGCTCAATCCAGTTAT+GGG - chr4_3:34759524-34759543 Msa0639120:three_prime_UTR 30.0%
CAATTCAAACAAGAGCAATA+AGG - chr4_3:34759574-34759593 Msa0639120:CDS 30.0%
AAGAAGAAGAATAAGAACAG+AGG - chr4_3:34759608-34759627 Msa0639120:CDS 30.0%
! AAAAGCCAAAACTTGTTCAT+GGG + chr4_3:34759654-34759673 None:intergenic 30.0%
! TAAAAGCCAAAACTTGTTCA+TGG + chr4_3:34759655-34759674 None:intergenic 30.0%
!!! TCATCTCTTGTTGATGATTT+TGG - chr4_3:34759725-34759744 Msa0639120:CDS 30.0%
!!! CATCTCTTGTTGATGATTTT+GGG - chr4_3:34759726-34759745 Msa0639120:CDS 30.0%
!!! ATCTCTTGTTGATGATTTTG+GGG - chr4_3:34759727-34759746 Msa0639120:CDS 30.0%
GAAAGTTAACTGTATTGTAG+AGG - chr4_3:34760257-34760276 Msa0639120:intron 30.0%
AAAATGAGCCTAAACTACAA+AGG + chr4_3:34760368-34760387 None:intergenic 30.0%
TGTTACCATTTGTTCATAAC+AGG - chr4_3:34760396-34760415 Msa0639120:intron 30.0%
TTTCACCTGTTATGAACAAA+TGG + chr4_3:34760404-34760423 None:intergenic 30.0%
! TTGATGCTTGTTGATTGAAT+TGG - chr4_3:34760565-34760584 Msa0639120:intron 30.0%
CAATTCTGGTATAAATGAGT+TGG - chr4_3:34760706-34760725 Msa0639120:intron 30.0%
! TAAATGAGTTGGATGTAATG+TGG - chr4_3:34760717-34760736 Msa0639120:intron 30.0%
! TAGGTTGAACGATAAATTTG+AGG - chr4_3:34760768-34760787 Msa0639120:intron 30.0%
!!! AAGTCCTTTTTTTTCTCCAT+TGG - chr4_3:34760931-34760950 Msa0639120:intron 30.0%
AGAACCAATGGAGAAAAAAA+AGG + chr4_3:34760938-34760957 None:intergenic 30.0%
TAATATGCTAAAACGTGAAC+AGG + chr4_3:34761009-34761028 None:intergenic 30.0%
TTAGCATATTACAGCAGTAT+TGG - chr4_3:34761018-34761037 Msa0639120:intron 30.0%
TATTGGACCATCAAAATTTG+AGG - chr4_3:34761035-34761054 Msa0639120:intron 30.0%
! TTTTTGTCAAACATAAGGGA+CGG - chr4_3:34761069-34761088 Msa0639120:intron 30.0%
AGCTAAAAATGGCTCTTAAA+TGG - chr4_3:34761133-34761152 Msa0639120:CDS 30.0%
GCTAAAAATGGCTCTTAAAT+GGG - chr4_3:34761134-34761153 Msa0639120:CDS 30.0%
! GTTAAGCATCTTGTATTTTC+AGG - chr4_3:34761362-34761381 Msa0639120:intron 30.0%
! TAAGCATCTTGTATTTTCAG+GGG - chr4_3:34761364-34761383 Msa0639120:intron 30.0%
! AAAATGATTTGTGATACTGG+GGG - chr4_3:34761415-34761434 Msa0639120:CDS 30.0%
CATAAAAACCAAAACTAAGG+TGG - chr4_3:34761616-34761635 Msa0639120:CDS 30.0%
ACTTTGTCAATTGTCATACA+AGG - chr4_3:34761643-34761662 Msa0639120:CDS 30.0%
TGTGATGTTATCAAATCATC+AGG - chr4_3:34761737-34761756 Msa0639120:intron 30.0%
CAATCGTCACTAAACAAAAT+TGG - chr4_3:34761905-34761924 Msa0639120:intron 30.0%
ATCGCTTCACTAATATGATT+AGG + chr4_3:34762317-34762336 None:intergenic 30.0%
! AATTTTCAATACTCGGAATC+AGG - chr4_3:34762337-34762356 Msa0639120:intron 30.0%
! ATTTTCAATACTCGGAATCA+GGG - chr4_3:34762338-34762357 Msa0639120:intron 30.0%
TTTGATATTGCAATGAAACG+TGG - chr4_3:34762405-34762424 Msa0639120:intron 30.0%
TGTTGTCACAATTGTGTAAT+AGG - chr4_3:34762609-34762628 Msa0639120:intron 30.0%
! AGTTTTGCATGACTTTCTTA+AGG - chr4_3:34762818-34762837 Msa0639120:CDS 30.0%
TATATGGTGCAATGCTATAA+GGG - chr4_3:34762851-34762870 Msa0639120:CDS 30.0%
CAATGCTATAAGGGAATTAT+TGG - chr4_3:34762860-34762879 Msa0639120:CDS 30.0%
! GTTTCTAGGTTAGTATTAGA+CGG + chr4_3:34762903-34762922 None:intergenic 30.0%
CTAACCTAGAAACAATTACA+AGG - chr4_3:34762910-34762929 Msa0639120:CDS 30.0%
! CAAACCTTGTAATTGTTTCT+AGG + chr4_3:34762917-34762936 None:intergenic 30.0%
CTAGAAACAATTACAAGGTT+TGG - chr4_3:34762915-34762934 Msa0639120:CDS 30.0%
AAATCCTTTCCACAATACAA+GGG + chr4_3:34762969-34762988 None:intergenic 30.0%
TTGATCATTGTTTACCTCTT+TGG - chr4_3:34762991-34763010 Msa0639120:CDS 30.0%
CTCTTCATATATAGGTTCAG+AGG - chr4_3:34759412-34759431 Msa0639120:three_prime_UTR 35.0%
! GTAATTTTCTCAGGTCGTAA+GGG + chr4_3:34759463-34759482 None:intergenic 35.0%
CAAAAAGCTCAATCCAGTTA+TGG - chr4_3:34759523-34759542 Msa0639120:three_prime_UTR 35.0%
AAGAAGAATAAGAACAGAGG+TGG - chr4_3:34759611-34759630 Msa0639120:CDS 35.0%
! TGTAACTGAATGGGTTTCAT+TGG - chr4_3:34759679-34759698 Msa0639120:CDS 35.0%
ATGAAGTAGCGAAAGAAGAA+GGG + chr4_3:34759709-34759728 None:intergenic 35.0%
AGCTTGAACACTTAAAACTG+TGG - chr4_3:34760007-34760026 Msa0639120:intron 35.0%
CTGTGGTTAATTGTATTCAG+AGG - chr4_3:34760024-34760043 Msa0639120:intron 35.0%
GGTTAATTGTATTCAGAGGA+TGG - chr4_3:34760028-34760047 Msa0639120:intron 35.0%
GCACATATTTCAAAGAGTTG+TGG + chr4_3:34760168-34760187 None:intergenic 35.0%
AAGTCAATTTAAGGATGGTG+TGG - chr4_3:34760228-34760247 Msa0639120:intron 35.0%
!!! TCCATCTCCACTTATTTTAG+AGG + chr4_3:34760283-34760302 None:intergenic 35.0%
TTTCCAAAGATGGTTGTCTA+AGG - chr4_3:34760314-34760333 Msa0639120:intron 35.0%
TATGGCATTAAGATAATCCC+AGG - chr4_3:34760490-34760509 Msa0639120:intron 35.0%
TTGTACTAACTTCAACACCT+GGG + chr4_3:34760510-34760529 None:intergenic 35.0%
ATTGTACTAACTTCAACACC+TGG + chr4_3:34760511-34760530 None:intergenic 35.0%
! TGTTGATTGAATTGGCACTT+TGG - chr4_3:34760573-34760592 Msa0639120:intron 35.0%
TAATTGTCCAAGTGCATGTT+TGG - chr4_3:34760650-34760669 Msa0639120:intron 35.0%
GATGTAATGTGGTTTATGTC+TGG - chr4_3:34760728-34760747 Msa0639120:intron 35.0%
AGGCTGAAATTCAATTGTAG+AGG - chr4_3:34760788-34760807 Msa0639120:intron 35.0%
!!! ATGTTTGGTTCCACTTTTTG+AGG + chr4_3:34760890-34760909 None:intergenic 35.0%
!! TCTAGCTCCTCAAATTTTGA+TGG + chr4_3:34761045-34761064 None:intergenic 35.0%
TTATCTTCGAGCAAAGAACA+TGG - chr4_3:34761095-34761114 Msa0639120:intron 35.0%
! TTAAATGGGAGCATGTTTGT+AGG - chr4_3:34761148-34761167 Msa0639120:CDS 35.0%
ATCAAAAAGATATCGGGCAA+AGG + chr4_3:34761259-34761278 None:intergenic 35.0%
! TTTGCCCGATATCTTTTTGA+TGG - chr4_3:34761258-34761277 Msa0639120:CDS 35.0%
TCCACCATCAAAAAGATATC+GGG + chr4_3:34761265-34761284 None:intergenic 35.0%
GTCCACCATCAAAAAGATAT+CGG + chr4_3:34761266-34761285 None:intergenic 35.0%
CAATATTACTTGGAGTAAGC+AGG + chr4_3:34761288-34761307 None:intergenic 35.0%
GAAGGCAACACAATATTACT+TGG + chr4_3:34761298-34761317 None:intergenic 35.0%
ATCTAGCAATCAACAAGTGA+AGG + chr4_3:34761316-34761335 None:intergenic 35.0%
!!! ACAGGATTTTTTAATGCCCA+TGG + chr4_3:34761460-34761479 None:intergenic 35.0%
! ATCCTGTTGCTATTATTAGG+AGG - chr4_3:34761473-34761492 Msa0639120:CDS 35.0%
AACCTCCTAATAATAGCAAC+AGG + chr4_3:34761478-34761497 None:intergenic 35.0%
ATTAGGAGGTTAAAAGAAGC+AGG - chr4_3:34761487-34761506 Msa0639120:CDS 35.0%
! AAGTAGATCCACCTTAGTTT+TGG + chr4_3:34761627-34761646 None:intergenic 35.0%
ATAACAAGTGAAGTGATGCA+TGG - chr4_3:34761833-34761852 Msa0639120:intron 35.0%
!! TAAGCTGTTTTGTCATTTCC+AGG + chr4_3:34761881-34761900 None:intergenic 35.0%
! GGTTATTACGTAAGTGTTGT+GGG + chr4_3:34761995-34762014 None:intergenic 35.0%
! TGGTTATTACGTAAGTGTTG+TGG + chr4_3:34761996-34762015 None:intergenic 35.0%
! TAATGACTTGTGCATTCACT+TGG + chr4_3:34762016-34762035 None:intergenic 35.0%
TCTGTGTGTTCCATAACAAA+TGG - chr4_3:34762037-34762056 Msa0639120:intron 35.0%
ATCATCCAATGTCCACAAAA+AGG + chr4_3:34762094-34762113 None:intergenic 35.0%
CTTCATACAGTCTCTTTATG+TGG + chr4_3:34762193-34762212 None:intergenic 35.0%
!!! TCGGAATCAGGGTTTTAAAT+GGG - chr4_3:34762349-34762368 Msa0639120:intron 35.0%
AAAATCGGATGTTACTGCAT+TGG + chr4_3:34762431-34762450 None:intergenic 35.0%
! AATGCAGTAACATCCGATTT+TGG - chr4_3:34762430-34762449 Msa0639120:intron 35.0%
TGTTCGTTTATGACTAGACA+TGG + chr4_3:34762533-34762552 None:intergenic 35.0%
ACAACACAATGAGATGTAGA+AGG + chr4_3:34762595-34762614 None:intergenic 35.0%
AAGTCATGCAAAACTAGTAC+TGG + chr4_3:34762813-34762832 None:intergenic 35.0%
ATGACTTTCTTAAGGTAGCT+AGG - chr4_3:34762826-34762845 Msa0639120:CDS 35.0%
CTTATAGCATTGCACCATAT+AGG + chr4_3:34762852-34762871 None:intergenic 35.0%
CTATATGGTGCAATGCTATA+AGG - chr4_3:34762850-34762869 Msa0639120:CDS 35.0%
CAAATCCTTTCCACAATACA+AGG + chr4_3:34762970-34762989 None:intergenic 35.0%
! ACTCTTCATTTTCCATCTCT+TGG + chr4_3:34763025-34763044 None:intergenic 35.0%
GATGGAAAATGAAGAGTTTG+AGG - chr4_3:34763028-34763047 Msa0639120:CDS 35.0%
TTCTAAGTCTCTATGAGAAC+CGG + chr4_3:34763101-34763120 None:intergenic 35.0%
CAAAGATCCCTTCACTGTAA+GGG - chr4_3:34759369-34759388 Msa0639120:three_prime_UTR 40.0%
TAGGTTACCCTTACAGTGAA+GGG + chr4_3:34759379-34759398 None:intergenic 40.0%
!! AAGGGTGAGTGAGTTTGTTA+CGG + chr4_3:34759445-34759464 None:intergenic 40.0%
! GGTAATTTTCTCAGGTCGTA+AGG + chr4_3:34759464-34759483 None:intergenic 40.0%
! ATTGAGCTTTTTGCCTGAAG+CGG + chr4_3:34759516-34759535 None:intergenic 40.0%
! GATGACCCATGAACAAGTTT+TGG - chr4_3:34759646-34759665 Msa0639120:CDS 40.0%
GATGAAGTAGCGAAAGAAGA+AGG + chr4_3:34759710-34759729 None:intergenic 40.0%
CAGAAGCCTGTTGGAAAAAA+TGG - chr4_3:34759752-34759771 Msa0639120:CDS 40.0%
!!! CTGTCACCATTTTTTCCAAC+AGG + chr4_3:34759761-34759780 None:intergenic 40.0%
TGTCACTCTAAATGCAGTGA+TGG - chr4_3:34759800-34759819 Msa0639120:CDS 40.0%
! TGGCTTTTTGTCTCCTTCTA+AGG - chr4_3:34759820-34759839 Msa0639120:CDS 40.0%
AAAACTTACGCCGTTCATGT+GGG + chr4_3:34759858-34759877 None:intergenic 40.0%
TAAAACTTACGCCGTTCATG+TGG + chr4_3:34759859-34759878 None:intergenic 40.0%
!! GTAGAGGCCTCTAAAATAAG+TGG - chr4_3:34760273-34760292 Msa0639120:intron 40.0%
!! GCCTCTAAAATAAGTGGAGA+TGG - chr4_3:34760279-34760298 Msa0639120:intron 40.0%
ATGCCTTAGACAACCATCTT+TGG + chr4_3:34760320-34760339 None:intergenic 40.0%
TCTGACAGATCACGATACTA+TGG - chr4_3:34760432-34760451 Msa0639120:intron 40.0%
TGTAGAACCAAACATGCACT+TGG + chr4_3:34760660-34760679 None:intergenic 40.0%
!! AAGTGCATGTTTGGTTCTAC+AGG - chr4_3:34760659-34760678 Msa0639120:intron 40.0%
!! AGTGCATGTTTGGTTCTACA+GGG - chr4_3:34760660-34760679 Msa0639120:intron 40.0%
CTACTTACCTCCTCAAAAAG+TGG - chr4_3:34760877-34760896 Msa0639120:intron 40.0%
!!! TTTGGTTCCACTTTTTGAGG+AGG + chr4_3:34760887-34760906 None:intergenic 40.0%
TTAAAAGAAGCAGGCCTTCA+TGG - chr4_3:34761496-34761515 Msa0639120:CDS 40.0%
TAAAAGAAGCAGGCCTTCAT+GGG - chr4_3:34761497-34761516 Msa0639120:CDS 40.0%
ATGGAGGTCTACAAAAGTGA+TGG - chr4_3:34761520-34761539 Msa0639120:CDS 40.0%
! AGGTCTACAAAAGTGATGGA+AGG - chr4_3:34761524-34761543 Msa0639120:CDS 40.0%
TCCAATGTCCACAAAAAGGT+GGG + chr4_3:34762090-34762109 None:intergenic 40.0%
ATCCAATGTCCACAAAAAGG+TGG + chr4_3:34762091-34762110 None:intergenic 40.0%
GTCTCTTTATGTGGATCAGA+AGG + chr4_3:34762184-34762203 None:intergenic 40.0%
AAAGAGACTGTATGAAGCCT+AGG - chr4_3:34762196-34762215 Msa0639120:CDS 40.0%
ATCATGGGATGAATAGCAGA+TGG + chr4_3:34762280-34762299 None:intergenic 40.0%
CTGCTATTCATCCCATGATA+TGG - chr4_3:34762281-34762300 Msa0639120:intron 40.0%
!! GCAAGAAGCATCCATATCAT+GGG + chr4_3:34762295-34762314 None:intergenic 40.0%
!!! CTCGGAATCAGGGTTTTAAA+TGG - chr4_3:34762348-34762367 Msa0639120:intron 40.0%
!!! CGGAATCAGGGTTTTAAATG+GGG - chr4_3:34762350-34762369 Msa0639120:intron 40.0%
!!! GGAATCAGGGTTTTAAATGG+GGG - chr4_3:34762351-34762370 Msa0639120:intron 40.0%
GAGATGTAGAAGGCAGTATT+CGG + chr4_3:34762585-34762604 None:intergenic 40.0%
! TCCAATTTTCAAAAGGCCGT+AGG + chr4_3:34762730-34762749 None:intergenic 40.0%
!! TACGGCCTTTTGAAAATTGG+AGG - chr4_3:34762729-34762748 Msa0639120:intron 40.0%
!! ACGGCCTTTTGAAAATTGGA+GGG - chr4_3:34762730-34762749 Msa0639120:intron 40.0%
! CTGACCCTCCAATTTTCAAA+AGG + chr4_3:34762737-34762756 None:intergenic 40.0%
! CATGCAAAACTAGTACTGGA+AGG + chr4_3:34762809-34762828 None:intergenic 40.0%
TTAAGGTAGCTAGGCCTATA+TGG - chr4_3:34762835-34762854 Msa0639120:CDS 40.0%
! ATTATTGGAGTGTTATGCCG+AGG - chr4_3:34762875-34762894 Msa0639120:CDS 40.0%
GTTAGTATTAGACGGTTCCT+CGG + chr4_3:34762895-34762914 None:intergenic 40.0%
TGAACCTCCCTTAAAAATGC+GGG + chr4_3:34762946-34762965 None:intergenic 40.0%
GTGAACCTCCCTTAAAAATG+CGG + chr4_3:34762947-34762966 None:intergenic 40.0%
TTCACCCTTGTATTGTGGAA+AGG - chr4_3:34762962-34762981 Msa0639120:CDS 40.0%
TCTTGGCTACTTAACCAAAG+AGG + chr4_3:34763008-34763027 None:intergenic 40.0%
TTGGTTAAGTAGCCAAGAGA+TGG - chr4_3:34763010-34763029 Msa0639120:CDS 40.0%
AACGTTGGAAAGCTTCAACT+TGG + chr4_3:34763057-34763076 None:intergenic 40.0%
CCTTACAGTGAAGGGATCTT+TGG + chr4_3:34759371-34759390 None:intergenic 45.0%
CCAAAGATCCCTTCACTGTA+AGG - chr4_3:34759368-34759387 Msa0639120:three_prime_UTR 45.0%
GTAGGTTACCCTTACAGTGA+AGG + chr4_3:34759380-34759399 None:intergenic 45.0%
GAAGAGAAATGAGGAAGGGT+AGG + chr4_3:34759398-34759417 None:intergenic 45.0%
!! AGGGTGAGTGAGTTTGTTAC+GGG + chr4_3:34759444-34759463 None:intergenic 45.0%
! TTTTTCTTCTCCACCGCTTC+AGG - chr4_3:34759500-34759519 Msa0639120:three_prime_UTR 45.0%
CTCAATCCAGTTATGGGAGA+TGG - chr4_3:34759530-34759549 Msa0639120:three_prime_UTR 45.0%
GCTCTCTCAACAACCTTAGA+AGG + chr4_3:34759836-34759855 None:intergenic 45.0%
TTTAAGGATGGTGTGGCTGA+TGG - chr4_3:34760235-34760254 Msa0639120:intron 45.0%
ACAGATCACGATACTATGGC+AGG - chr4_3:34760436-34760455 Msa0639120:intron 45.0%
!! GTAGAATCGGCTCGCAAATA+TGG - chr4_3:34760472-34760491 Msa0639120:intron 45.0%
CTTGTGTTGCCTCTAACTAG+AGG - chr4_3:34760600-34760619 Msa0639120:intron 45.0%
TGTTGCCTCTAACTAGAGGA+GGG - chr4_3:34760604-34760623 Msa0639120:intron 45.0%
TGGGCAAACATCAGAACCAA+TGG + chr4_3:34760950-34760969 None:intergenic 45.0%
TCTGATGTTTGCCCATCTAC+TGG - chr4_3:34760955-34760974 Msa0639120:intron 45.0%
GAGCATGTTTGTAGGATTGC+AGG - chr4_3:34761156-34761175 Msa0639120:CDS 45.0%
GTTTGTAGGATTGCAGGCAA+CGG - chr4_3:34761162-34761181 Msa0639120:CDS 45.0%
AACCTGCTTCAACCATAGCA+CGG + chr4_3:34761215-34761234 None:intergenic 45.0%
! GCCCGATATCTTTTTGATGG+TGG - chr4_3:34761261-34761280 Msa0639120:CDS 45.0%
TTTATTGCTTCCTCCACCAC+AGG + chr4_3:34761397-34761416 None:intergenic 45.0%
! AAAAGTGATGGAAGGCTTGC+AGG - chr4_3:34761532-34761551 Msa0639120:CDS 45.0%
CCAATGTCCACAAAAAGGTG+GGG + chr4_3:34762089-34762108 None:intergenic 45.0%
TGTATGAAGCCTAGGCTTAG+TGG - chr4_3:34762204-34762223 Msa0639120:CDS 45.0%
TATGGTCAACCACTAAGCCT+AGG + chr4_3:34762216-34762235 None:intergenic 45.0%
!! GGCAAGAAGCATCCATATCA+TGG + chr4_3:34762296-34762315 None:intergenic 45.0%
!! ATGGTTAGCCTCTATCTCAC+CGG + chr4_3:34762514-34762533 None:intergenic 45.0%
GTATGCAGCATATAGTGACC+TGG - chr4_3:34762698-34762717 Msa0639120:intron 45.0%
!! GCCTACGGCCTTTTGAAAAT+TGG - chr4_3:34762726-34762745 Msa0639120:intron 45.0%
ATTGGAGGGTCAGACTATCA+TGG - chr4_3:34762744-34762763 Msa0639120:intron 45.0%
TCAGACTATCATGGAAGAGG+AGG - chr4_3:34762753-34762772 Msa0639120:intron 45.0%
AGGACACCATGAATCTGAAC+TGG - chr4_3:34762773-34762792 Msa0639120:intron 45.0%
GGACACCATGAATCTGAACT+GGG - chr4_3:34762774-34762793 Msa0639120:intron 45.0%
CACTTCCCAGTTCAGATTCA+TGG + chr4_3:34762782-34762801 None:intergenic 45.0%
! TGGGAGAACCCGCATTTTTA+AGG - chr4_3:34762935-34762954 Msa0639120:CDS 45.0%
! GGGAGAACCCGCATTTTTAA+GGG - chr4_3:34762936-34762955 Msa0639120:CDS 45.0%
!! AGAACCCGCATTTTTAAGGG+AGG - chr4_3:34762939-34762958 Msa0639120:CDS 45.0%
TTCCAACGTTTCTACCAGTC+AGG - chr4_3:34763067-34763086 Msa0639120:CDS 45.0%
TCCAACGTTTCTACCAGTCA+GGG - chr4_3:34763068-34763087 Msa0639120:CDS 45.0%
!! GAAGGGATCTTTGGAGTCAC+AGG + chr4_3:34759362-34759381 None:intergenic 50.0%
GCGATACCATCTCCCATAAC+TGG + chr4_3:34759539-34759558 None:intergenic 50.0%
GTTGAGAGAGCCCACATGAA+CGG - chr4_3:34759845-34759864 Msa0639120:CDS 50.0%
GTGTTGCCTCTAACTAGAGG+AGG - chr4_3:34760603-34760622 Msa0639120:intron 50.0%
GTTGCCTCTAACTAGAGGAG+GGG - chr4_3:34760605-34760624 Msa0639120:intron 50.0%
TTGCCTCTAACTAGAGGAGG+GGG - chr4_3:34760606-34760625 Msa0639120:intron 50.0%
ACCTGCTTCAACCATAGCAC+GGG + chr4_3:34761214-34761233 None:intergenic 50.0%
TTTCAGGGGAAGTGAACCTG+TGG - chr4_3:34761378-34761397 Msa0639120:CDS 50.0%
TGTAGACCTCCATCCCATGA+AGG + chr4_3:34761513-34761532 None:intergenic 50.0%
! TGCACTACCCCACCTTTTTG+TGG - chr4_3:34762079-34762098 Msa0639120:intron 50.0%
! CCCCACCTTTTTGTGGACAT+TGG - chr4_3:34762086-34762105 Msa0639120:intron 50.0%
ACTCATCACTACCGCCAACT+TGG - chr4_3:34762483-34762502 Msa0639120:intron 50.0%
CTCATCACTACCGCCAACTT+GGG - chr4_3:34762484-34762503 Msa0639120:intron 50.0%
GGGTCAGACTATCATGGAAG+AGG - chr4_3:34762750-34762769 Msa0639120:intron 50.0%
GGAGGTTCACCCTTGTATTG+TGG - chr4_3:34762957-34762976 Msa0639120:CDS 50.0%
TCCCTGACTGGTAGAAACGT+TGG + chr4_3:34763072-34763091 None:intergenic 50.0%
AACGTTTCTACCAGTCAGGG+AGG - chr4_3:34763071-34763090 Msa0639120:CDS 50.0%
! GAGCTTTTTGCCTGAAGCGG+TGG + chr4_3:34759513-34759532 None:intergenic 55.0%
! TTTGGGGTGCAGAAGCCTGT+TGG - chr4_3:34759743-34759762 Msa0639120:CDS 55.0%
CATCCCCGAGGCTGTAGAAT+CGG - chr4_3:34760459-34760478 Msa0639120:intron 55.0%
TGCCTCTAACTAGAGGAGGG+GGG - chr4_3:34760607-34760626 Msa0639120:intron 55.0%
TTCCCCCCTCCTCTAGTTAG+AGG + chr4_3:34760612-34760631 None:intergenic 55.0%
GTTTGCCCATCTACTGGCAG+TGG - chr4_3:34760961-34760980 Msa0639120:intron 55.0%
CTCCACCACTGCCAGTAGAT+GGG + chr4_3:34760969-34760988 None:intergenic 55.0%
TCTCCACCACTGCCAGTAGA+TGG + chr4_3:34760970-34760989 None:intergenic 55.0%
TGGTGGAGACACTGAAGCAG+AGG - chr4_3:34760981-34761000 Msa0639120:intron 55.0%
! CAACCATAGCACGGGCTACA+TGG + chr4_3:34761206-34761225 None:intergenic 55.0%
!! TTGCCGTTCTGGCTCATCCA+TGG - chr4_3:34761440-34761459 Msa0639120:CDS 55.0%
!! TGCCGTTCTGGCTCATCCAT+GGG - chr4_3:34761441-34761460 Msa0639120:CDS 55.0%
TGCCCATGGATGAGCCAGAA+CGG + chr4_3:34761446-34761465 None:intergenic 55.0%
AGAAGCAGGCCTTCATGGGA+TGG - chr4_3:34761501-34761520 Msa0639120:CDS 55.0%
AGTGACCTGGCTGATGCCTA+CGG - chr4_3:34762711-34762730 Msa0639120:intron 55.0%
TACCAGTCAGGGAGGAACTC+CGG - chr4_3:34763079-34763098 Msa0639120:CDS 55.0%
TACTATGGCAGGCATCCCCG+AGG - chr4_3:34760447-34760466 Msa0639120:intron 60.0%
! GAGCCGATTCTACAGCCTCG+GGG + chr4_3:34760465-34760484 None:intergenic 60.0%
! CGAGCCGATTCTACAGCCTC+GGG + chr4_3:34760466-34760485 None:intergenic 60.0%
! GCGAGCCGATTCTACAGCCT+CGG + chr4_3:34760467-34760486 None:intergenic 60.0%
TGCCCATCTACTGGCAGTGG+TGG - chr4_3:34760964-34760983 Msa0639120:intron 60.0%
! ACGGGCTACATGGAGCCTTC+CGG + chr4_3:34761196-34761215 None:intergenic 60.0%
GCTCCATGTAGCCCGTGCTA+TGG - chr4_3:34761200-34761219 Msa0639120:CDS 60.0%
GCCCGTGCTATGGTTGAAGC+AGG - chr4_3:34761210-34761229 Msa0639120:CDS 60.0%
CAGGGGAAGTGAACCTGTGG+TGG - chr4_3:34761381-34761400 Msa0639120:CDS 60.0%
GGGAAGTGAACCTGTGGTGG+AGG - chr4_3:34761384-34761403 Msa0639120:CDS 60.0%
!! TACTGGGGGTGTTGCCGTTC+TGG - chr4_3:34761429-34761448 Msa0639120:CDS 60.0%
AGCAGGCCTTCATGGGATGG+AGG - chr4_3:34761504-34761523 Msa0639120:CDS 60.0%
!! TACCGCCAACTTGGGCTAGC+CGG - chr4_3:34762492-34762511 Msa0639120:intron 60.0%
! TCTCACCGGCTAGCCCAAGT+TGG + chr4_3:34762500-34762519 None:intergenic 60.0%
!! TGGGCTAGCCGGTGAGATAG+AGG - chr4_3:34762503-34762522 Msa0639120:intron 60.0%
AAAGGCCGTAGGCATCAGCC+AGG + chr4_3:34762719-34762738 None:intergenic 60.0%
AACCGGAGTTCCTCCCTGAC+TGG + chr4_3:34763084-34763103 None:intergenic 60.0%
GCAGGCAACGGAGTTGCTCC+CGG - chr4_3:34761174-34761193 Msa0639120:CDS 65.0%
GCAACGGAGTTGCTCCCGGA+AGG - chr4_3:34761178-34761197 Msa0639120:CDS 65.0%
CGGGCTACATGGAGCCTTCC+GGG + chr4_3:34761195-34761214 None:intergenic 65.0%
! CACCGGCTAGCCCAAGTTGG+CGG + chr4_3:34762497-34762516 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 34759350 34763321 34759350 ID=Msa0639120;Name=Msa0639120
chr4_3 mRNA 34759350 34763321 34759350 ID=Msa0639120-mRNA-1;Parent=Msa0639120;Name=Msa0639120-mRNA-1;_AED=0.03;_eAED=0.03;_QI=192|1|1|1|1|1|5|203|450
chr4_3 exon 34759350 34759965 34759350 ID=Msa0639120-mRNA-1:exon:8133;Parent=Msa0639120-mRNA-1
chr4_3 exon 34761118 34761287 34761118 ID=Msa0639120-mRNA-1:exon:8132;Parent=Msa0639120-mRNA-1
chr4_3 exon 34761373 34761690 34761373 ID=Msa0639120-mRNA-1:exon:8131;Parent=Msa0639120-mRNA-1
chr4_3 exon 34762129 34762253 34762129 ID=Msa0639120-mRNA-1:exon:8130;Parent=Msa0639120-mRNA-1
chr4_3 exon 34762803 34763321 34762803 ID=Msa0639120-mRNA-1:exon:8129;Parent=Msa0639120-mRNA-1
chr4_3 five_prime_UTR 34763130 34763321 34763130 ID=Msa0639120-mRNA-1:five_prime_utr;Parent=Msa0639120-mRNA-1
chr4_3 CDS 34762803 34763129 34762803 ID=Msa0639120-mRNA-1:cds;Parent=Msa0639120-mRNA-1
chr4_3 CDS 34762129 34762253 34762129 ID=Msa0639120-mRNA-1:cds;Parent=Msa0639120-mRNA-1
chr4_3 CDS 34761373 34761690 34761373 ID=Msa0639120-mRNA-1:cds;Parent=Msa0639120-mRNA-1
chr4_3 CDS 34761118 34761287 34761118 ID=Msa0639120-mRNA-1:cds;Parent=Msa0639120-mRNA-1
chr4_3 CDS 34759553 34759965 34759553 ID=Msa0639120-mRNA-1:cds;Parent=Msa0639120-mRNA-1
chr4_3 three_prime_UTR 34759350 34759552 34759350 ID=Msa0639120-mRNA-1:three_prime_utr;Parent=Msa0639120-mRNA-1
Gene Sequence

>Msa0639120

ATGGGAGATGGTATCGCAATTCAAAGCACAAACAATTCAAACAAGAGCAATAAGGATAAGAAAAAGAAGAAGAAGAATAAGAACAGAGGTGGAAGCAAGAAGAAGATGACCCATGAACAAGTTTTGGCTTTTAAATTTGTAACTGAATGGGTTTCATTGGATAACCCTTCTTCTTTCGCTACTTCATCTCTTGTTGATGATTTTGGGGTGCAGAAGCCTGTTGGAAAAAATGGTGACAGAGTTGTGTTTGATTTGCACTGTCACTCTAAATGCAGTGATGGCTTTTTGTCTCCTTCTAAGGTTGTTGAGAGAGCCCACATGAACGGCGTGAAAGTTCTTGCTCTGACAGATCACGATACTATGGCAGGCATCCCCGAGGCTGTAGAATCGGCTCGCAAATATGGCATTAAGATAATCCCAGGTGTTGAAGTTAGTACAATATTTTATCCAAGTGGTGGAGACACTGAAGCAGAGGAACCTGTTCACGTTTTAGCATATTACAGCAGTATTGGACCATCAAAATTTGAGGAGCTAGATAAGTTTTTGTCAAACATAAGGGACGGACGTTATCTTCGAGCAAAGAACATGGTCTTAAAGCTTAACAAGCTAAAAATGGCTCTTAAATGGGAGCATGTTTGTAGGATTGCAGGCAACGGAGTTGCTCCCGGAAGGCTCCATGTAGCCCGTGCTATGGTTGAAGCAGGTTATGTTGAAAATCTCAAACAAGCCTTTGCCCGATATCTTTTTGATGGTGGACCTGCTTACTCCAAGGGAAGTGAACCTGTGGTGGAGGAAGCAATAAAAATGATTTGTGATACTGGGGGTGTTGCCGTTCTGGCTCATCCATGGGCATTAAAAAATCCTGTTGCTATTATTAGGAGGTTAAAAGAAGCAGGCCTTCATGGGATGGAGGTCTACAAAAGTGATGGAAGGCTTGCAGCATATAGTGACCTGGCTGATGCCTACGGCCTTTTGAAAATTGGAGGGTCAGACTATCATGGAAGAGGAGGACACCATGAATCTGAACTGGGAAGTGTAAACCTTCCAGTACTAGTTTTGCATGACTTTCTTAAGGTAGCTAGGCCTATATGGTGCAATGCTATAAGGGAATTATTGGAGTGTTATGCCGAGGAACCGTCTAATACTAACCTAGAAACAATTACAAGGTTTGGGAGAACCCGCATTTTTAAGGGAGGTTCACCCTTGTATTGTGGAAAGGATTTGATTGATCATTGTTTACCTCTTTGGTTAAGTAGCCAAGAGATGGAAAATGAAGAGTTTGAGGCTACCAAGTTGAAGCTTTCCAACGTTTCTACCAGTCAGGGAGGAACTCCGGTTCTCATAGAGACTTAG

Protein sequence

>Msa0639120

MGDGIAIQSTNNSNKSNKDKKKKKKNKNRGGSKKKMTHEQVLAFKFVTEWVSLDNPSSFATSSLVDDFGVQKPVGKNGDRVVFDLHCHSKCSDGFLSPSKVVERAHMNGVKVLALTDHDTMAGIPEAVESARKYGIKIIPGVEVSTIFYPSGGDTEAEEPVHVLAYYSSIGPSKFEELDKFLSNIRDGRYLRAKNMVLKLNKLKMALKWEHVCRIAGNGVAPGRLHVARAMVEAGYVENLKQAFARYLFDGGPAYSKGSEPVVEEAIKMICDTGGVAVLAHPWALKNPVAIIRRLKEAGLHGMEVYKSDGRLAAYSDLADAYGLLKIGGSDYHGRGGHHESELGSVNLPVLVLHDFLKVARPIWCNAIRELLECYAEEPSNTNLETITRFGRTRIFKGGSPLYCGKDLIDHCLPLWLSSQEMENEEFEATKLKLSNVSTSQGGTPVLIET*