AlfalfaGEDB | Msa0092690

M. sativa cultivar zhongmu-4 / Msa0092690

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0092690	XP_013470174.1	95.092	163	5	1	1	163	1	160	3.30e-102	300

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0092690	A0A072VQY7	95.092	163	5	1	1	163	1	160	1.57e-102	300

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0016670	Msa0092690	-0.811156	8.059115e-51	-8.615850e-47
Msa0032370	Msa0092690	-0.802523	5.387106e-49	-8.615850e-47
Msa0032920	Msa0092690	0.828986	6.625446e-55	-8.615850e-47
Msa0039250	Msa0092690	-0.808752	2.654585e-50	-8.615850e-47
Msa0043670	Msa0092690	0.962600	4.519105e-121	-8.615850e-47
Msa0073670	Msa0092690	-0.825924	3.594658e-54	-8.615850e-47
Msa0077200	Msa0092690	-0.826677	2.378726e-54	-8.615850e-47
Msa0092670	Msa0092690	0.986633	1.908621e-167	-8.615850e-47
Msa0092690	Msa0092740	0.983269	2.763312e-157	-8.615850e-47
Msa0092690	Msa0124990	-0.824844	6.477718e-54	-8.615850e-47
Msa0092690	Msa0130240	-0.829391	5.284182e-55	-8.615850e-47
Msa0092690	Msa0133720	-0.807016	6.210021e-50	-8.615850e-47
Msa0092690	Msa0134180	-0.839401	1.619851e-57	-8.615850e-47
Msa0092690	Msa0134610	-0.806432	8.251580e-50	-8.615850e-47
Msa0092690	Msa0137610	0.965996	2.466728e-125	-8.615850e-47
Msa0092690	Msa0138920	-0.816359	5.760986e-52	-8.615850e-47
Msa0092690	Msa0146280	-0.806182	9.313511e-50	-8.615850e-47
Msa0092690	Msa0180930	-0.802573	5.262233e-49	-8.615850e-47
Msa0092690	Msa0182620	0.867965	9.273995e-66	-8.615850e-47
Msa0092690	Msa0186890	-0.834458	2.962514e-56	-8.615850e-47
Msa0092690	Msa0188690	-0.817821	2.703206e-52	-8.615850e-47
Msa0092690	Msa0205840	-0.831545	1.570663e-55	-8.615850e-47
Msa0092690	Msa0239450	-0.815442	9.225055e-52	-8.615850e-47
Msa0092690	Msa0274680	-0.807686	4.477573e-50	-8.615850e-47
Msa0092690	Msa0287300	-0.804778	1.834734e-49	-8.615850e-47
Msa0092690	Msa0307850	-0.834204	3.431393e-56	-8.615850e-47
Msa0092690	Msa0413450	-0.808288	3.333328e-50	-8.615850e-47
Msa0092690	Msa0417880	-0.812404	4.312890e-51	-8.615850e-47
Msa0092690	Msa0434920	-0.817700	2.878482e-52	-8.615850e-47
Msa0092690	Msa0475790	-0.812918	3.329631e-51	-8.615850e-47
Msa0092690	Msa0478870	-0.814542	1.460801e-51	-8.615850e-47
Msa0092690	Msa0527550	-0.803806	2.924516e-49	-8.615850e-47
Msa0092690	Msa0541860	-0.836446	9.314947e-57	-8.615850e-47
Msa0092690	Msa0552810	-0.812072	5.094903e-51	-8.615850e-47
Msa0092690	Msa0555910	-0.802740	4.859483e-49	-8.615850e-47
Msa0092690	Msa0560470	-0.815786	7.735430e-52	-8.615850e-47
Msa0092690	Msa0561430	-0.807490	4.927676e-50	-8.615850e-47
Msa0092690	Msa0581070	-0.824840	6.490109e-54	-8.615850e-47
Msa0092690	Msa0609450	-0.800193	1.616240e-48	-8.615850e-47
Msa0092690	Msa0620990	-0.841795	3.826206e-58	-8.615850e-47
Msa0092690	Msa0642720	-0.801624	8.248384e-49	-8.615850e-47
Msa0092690	Msa0654870	-0.819701	1.011336e-52	-8.615850e-47
Msa0092690	Msa0659030	-0.824686	7.055660e-54	-8.615850e-47
Msa0092690	Msa0661700	0.802007	6.881042e-49	-8.615850e-47
Msa0092690	Msa0663300	-0.800213	1.601276e-48	-8.615850e-47
Msa0092690	Msa0687630	-0.802425	5.644235e-49	-8.615850e-47
Msa0092690	Msa0692080	-0.817142	3.845027e-52	-8.615850e-47
Msa0092690	Msa0697690	-0.801590	8.381402e-49	-8.615850e-47
Msa0092690	Msa0702340	-0.822792	1.959852e-53	-8.615850e-47
Msa0092690	Msa0702590	-0.822469	2.329257e-53	-8.615850e-47
Msa0092690	Msa0702660	-0.821837	3.264648e-53	-8.615850e-47
Msa0092690	Msa0703230	-0.832453	9.374373e-56	-8.615850e-47
Msa0092690	Msa0705000	-0.825107	5.614120e-54	-8.615850e-47
Msa0092690	Msa0705040	-0.832933	7.123732e-56	-8.615850e-47
Msa0092690	Msa0709780	-0.811652	6.289970e-51	-8.615850e-47
Msa0092690	Msa0734960	-0.806459	8.143713e-50	-8.615850e-47
Msa0092690	Msa0788770	-0.826346	2.853127e-54	-8.615850e-47
Msa0092690	Msa0790400	-0.832772	7.811974e-56	-8.615850e-47
Msa0092690	Msa0824640	-0.807699	4.448812e-50	-8.615850e-47
Msa0092690	Msa0846140	-0.800746	1.246969e-48	-8.615850e-47
Msa0092690	Msa0856050	-0.821524	3.857404e-53	-8.615850e-47
Msa0092690	Msa0861510	-0.800536	1.376423e-48	-8.615850e-47
Msa0092690	Msa0864010	-0.813655	2.292905e-51	-8.615850e-47
Msa0092690	Msa0930780	-0.829195	5.896577e-55	-8.615850e-47
Msa0092690	Msa0943170	-0.804477	2.120237e-49	-8.615850e-47
Msa0092690	Msa0948250	-0.824313	8.637930e-54	-8.615850e-47
Msa0092690	Msa0968670	-0.802416	5.668396e-49	-8.615850e-47
Msa0092690	Msa0986920	-0.812403	4.315453e-51	-8.615850e-47
Msa0092690	Msa1004420	-0.816635	4.996595e-52	-8.615850e-47
Msa0092690	Msa1005820	-0.815291	9.968591e-52	-8.615850e-47
Msa0092690	Msa1012380	-0.805155	1.530305e-49	-8.615850e-47
Msa0092690	Msa1034230	-0.803374	3.594575e-49	-8.615850e-47
Msa0092690	Msa1091520	-0.811834	5.742418e-51	-8.615850e-47
Msa0092690	Msa1097640	-0.806168	9.375004e-50	-8.615850e-47
Msa0092690	Msa1126510	-0.802742	4.856027e-49	-8.615850e-47
Msa0092690	Msa1126770	-0.827933	1.189591e-54	-8.615850e-47
Msa0092690	Msa1127890	-0.805304	1.424035e-49	-8.615850e-47
Msa0092690	Msa1139810	-0.800404	1.464685e-48	-8.615850e-47
Msa0092690	Msa1143650	-0.820037	8.473146e-53	-8.615850e-47
Msa0092690	Msa1159760	-0.807243	5.560000e-50	-8.615850e-47
Msa0092690	Msa1173330	-0.818471	1.926982e-52	-8.615850e-47
Msa0092690	Msa1174100	-0.814874	1.233512e-51	-8.615850e-47
Msa0092690	Msa1174530	-0.818122	2.311343e-52	-8.615850e-47
Msa0092690	Msa1184370	-0.820018	8.559591e-53	-8.615850e-47
Msa0092690	Msa1201830	-0.811543	6.641484e-51	-8.615850e-47
Msa0092690	Msa1218140	-0.804510	2.087164e-49	-8.615850e-47
Msa0092690	Msa1224840	-0.827997	1.148163e-54	-8.615850e-47
Msa0092690	Msa1227690	-0.838602	2.608872e-57	-8.615850e-47
Msa0092690	Msa1228890	-0.823924	1.065747e-53	-8.615850e-47
Msa0092690	Msa1232710	-0.824156	9.403089e-54	-8.615850e-47
Msa0092690	Msa1235250	-0.813314	2.724639e-51	-8.615850e-47
Msa0092690	Msa1252190	-0.844756	6.206178e-59	-8.615850e-47
Msa0092690	Msa1254710	-0.807997	3.844373e-50	-8.615850e-47
Msa0092690	Msa1258710	-0.829498	4.976848e-55	-8.615850e-47
Msa0092690	Msa1264710	-0.809457	1.874650e-50	-8.615850e-47
Msa0092690	Msa1274060	-0.825219	5.281878e-54	-8.615850e-47
Msa0092690	Msa1274280	-0.840199	1.004090e-57	-8.615850e-47
Msa0092690	Msa1280560	-0.810023	1.416393e-50	-8.615850e-47
Msa0092690	Msa1283990	-0.803946	2.734522e-49	-8.615850e-47
Msa0092690	Msa1292830	-0.841329	5.076788e-58	-8.615850e-47
Msa0092690	Msa1294840	-0.803744	3.012156e-49	-8.615850e-47
Msa0092690	Msa1299360	-0.803494	3.393914e-49	-8.615850e-47
Msa0092690	Msa1307570	-0.810592	1.067914e-50	-8.615850e-47
Msa0092690	Msa1307950	-0.816414	5.598817e-52	-8.615850e-47
Msa0092690	Msa1313300	-0.828868	7.075051e-55	-8.615850e-47
Msa0092690	Msa1333560	-0.859623	3.639856e-63	-8.615850e-47
Msa0092690	Msa1365150	-0.822266	2.596575e-53	-8.615850e-47
Msa0092690	Msa1367880	-0.812903	3.353582e-51	-8.615850e-47
Msa0092690	Msa1369150	-0.835715	1.427786e-56	-8.615850e-47
Msa0092690	Msa1373330	-0.829970	3.821592e-55	-8.615850e-47
Msa0092690	Msa1385070	-0.808479	3.035237e-50	-8.615850e-47
Msa0092690	Msa1411500	-0.819315	1.239146e-52	-8.615850e-47
Msa0092690	Msa1427060	-0.807238	5.574043e-50	-8.615850e-47
Msa0092690	Msa1440260	0.968556	7.593983e-129	-8.615850e-47
Msa0092690	Msa1442850	-0.813429	2.570812e-51	-8.615850e-47
Msa0092690	Msa1443300	-0.825039	5.825686e-54	-8.615850e-47
Msa0092690	Msa1443930	-0.812680	3.753758e-51	-8.615850e-47
Msa0092690	Msa1459380	-0.813877	2.048600e-51	-8.615850e-47
Msa0092690	Msa1459460	-0.800044	1.733744e-48	-8.615850e-47
Msa0092690	Msa1466990	-0.838457	2.843868e-57	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0092690	MtrunA17_Chr1g0209811	95.092	163	5	1	1	163	1	160	3.03e-106	300
Msa0092690	MtrunA17_Chr6g0457561	46.584	161	66	6	4	163	27	168	8.29e-35	119
Msa0092690	MtrunA17_Chr8g0391011	46.012	163	67	8	7	163	13	160	5.04e-29	104
Msa0092690	MtrunA17_Chr6g0484481	45.122	164	68	7	5	163	21	167	1.28e-25	96.3
Msa0092690	MtrunA17_Chr1g0171841	38.931	131	60	4	26	149	31	148	4.39e-13	63.2
Msa0092690	MtrunA17_Chr4g0045631	38.732	142	58	5	9	149	22	135	1.47e-12	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0092690	AT1G68490.1	59.756	164	53	6	4	163	29	183	4.03e-49	157
Msa0092690	AT1G13390.1	52.469	162	65	5	4	163	25	176	4.89e-42	138
Msa0092690	AT1G13390.2	52.469	162	65	5	4	163	25	176	4.89e-42	138
Msa0092690	AT5G16110.1	50.909	165	67	7	4	163	89	244	1.94e-35	124
Msa0092690	AT3G02555.2	46.296	162	56	5	5	163	29	162	2.16e-27	100
Msa0092690	AT3G02555.1	46.296	162	56	5	5	163	29	162	2.16e-27	100

Find 108 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CGCCGGATTGTTACCAAAAT+TGG	0.118190	1_2:-75384729	None:intergenic
TTGCAGATTGAGGGTTAATT+TGG	0.190437	1_2:+75385074	Msa0092690:three_prime_UTR
GGATGTGTTCGGGCCAATTT+TGG	0.234336	1_2:+75384716	Msa0092690:CDS
AGCTACGGGATAAGGAATTT+TGG	0.240607	1_2:+75384901	Msa0092690:three_prime_UTR
AGACACTAGTACAAGAAATA+AGG	0.256941	1_2:-75385108	None:intergenic
TGTAAGTAGAAGAGTCATTA+GGG	0.322886	1_2:+75385158	Msa0092690:three_prime_UTR
TTGTAACTACCGGCTTAAAA+AGG	0.335635	1_2:+75385231	Msa0092690:three_prime_UTR
AGTCCGACACGGCGGGGCTT+AGG	0.339729	1_2:-75384001	None:intergenic
AGTAGCTAACCCACTAATTC+AGG	0.341828	1_2:+75384583	Msa0092690:CDS
GTCAATAGTGTCTCTTGTTT+AGG	0.345549	1_2:+75385019	Msa0092690:three_prime_UTR
TTGTAAGTAGAAGAGTCATT+AGG	0.348876	1_2:+75385157	Msa0092690:three_prime_UTR
CTTATCCCGTAGCTCTTATA+TGG	0.352258	1_2:-75384892	None:intergenic
TAATTCAGGATGCTCGATTC+GGG	0.363565	1_2:+75384597	Msa0092690:CDS
CCTCCCTTCCTTGCAGAAGA+TGG	0.393816	1_2:-75384695	None:intergenic
CTAATTCAGGATGCTCGATT+CGG	0.401608	1_2:+75384596	Msa0092690:CDS
CATATAAGAGCTACGGGATA+AGG	0.402512	1_2:+75384893	Msa0092690:three_prime_UTR
AGAAGGTGGCAGACCGGATG+GGG	0.404001	1_2:-75384669	None:intergenic
GTGACTAAATAATGCGGTTA+AGG	0.406349	1_2:+75385051	Msa0092690:three_prime_UTR
GAGCAGGGATGCTGCAATTA+CGG	0.410027	1_2:-75384790	None:intergenic
CGCCCCTCTCACCGTCGTCA+TGG	0.419708	1_2:+75384633	Msa0092690:CDS
GTCCGACACGGCGGGGCTTA+GGG	0.420772	1_2:-75384000	None:intergenic
TGCAGATTGAGGGTTAATTT+GGG	0.421481	1_2:+75385075	Msa0092690:three_prime_UTR
CAAGGAAGGGAGGATGTGTT+CGG	0.421741	1_2:+75384705	Msa0092690:CDS
GATCCTTCCGGTGGCATCTC+AGG	0.425952	1_2:+75384056	Msa0092690:CDS
GACACTAGTACAAGAAATAA+GGG	0.430863	1_2:-75385107	None:intergenic
CTCCCTTCCTTGCAGAAGAT+GGG	0.432493	1_2:-75384694	None:intergenic
TAGTTACAATTACAATTCAT+AGG	0.433568	1_2:-75385217	None:intergenic
GGTGGAACTGCAAGCAAGCT+TGG	0.435280	1_2:-75383221	None:intergenic
AAGGATTCGATTGCCTTGAC+AGG	0.436802	1_2:+75384762	Msa0092690:CDS
CGGTTAAGGTTGCAGATTGA+GGG	0.439951	1_2:+75385065	Msa0092690:three_prime_UTR
TAATTGCAGCATCCCTGCTC+TGG	0.448656	1_2:+75384793	Msa0092690:CDS
GCCCCTCTCACCGTCGTCAT+GGG	0.457309	1_2:+75384634	Msa0092690:CDS
GGAGAAGGTGGCAGACCGGA+TGG	0.458776	1_2:-75384671	None:intergenic
GTGGAACTGCAAGCAAGCTT+GGG	0.463428	1_2:-75383220	None:intergenic
CTCATCTGCGTCAAATCCCT+TGG	0.463633	1_2:+75384205	Msa0092690:CDS
GGTGGCAGACCGGATGGGGC+AGG	0.466438	1_2:-75384665	None:intergenic
TGCCCTAAGCCCCGCCGTGT+CGG	0.473384	1_2:+75383998	Msa0092690:CDS
CTGTTGTTCTAAGCCAGAGC+AGG	0.481278	1_2:-75384806	None:intergenic
TAGAAGAAATGAAGAGGTGC+AGG	0.484324	1_2:-75383242	None:intergenic
GAGAAGGTGGCAGACCGGAT+GGG	0.484866	1_2:-75384670	None:intergenic
ATTGAAAGAAGAAAGTAAAG+AGG	0.489519	1_2:-75383279	None:intergenic
ACTACCCGAGCAGATCCTTC+CGG	0.494170	1_2:+75384044	Msa0092690:CDS
GTGGTGGTTCCTGCCCCATC+CGG	0.495940	1_2:+75384656	Msa0092690:CDS
TTGAATCACACGGTTCAACT+TGG	0.496164	1_2:-75384181	None:intergenic
GTTGAGGAGTCCGACACGGC+GGG	0.496709	1_2:-75384008	None:intergenic
GTAGAAGAGTCATTAGGGGA+TGG	0.509141	1_2:+75385163	Msa0092690:three_prime_UTR
GCGGTTAAGGTTGCAGATTG+AGG	0.511423	1_2:+75385064	Msa0092690:three_prime_UTR
CTCACCGTCGTCATGGGTGG+TGG	0.513742	1_2:+75384640	Msa0092690:CDS
TCTGCTCGGGTAGTCGTTGA+CGG	0.526759	1_2:-75384035	None:intergenic
TGAATTGTAATTGTAACTAC+CGG	0.527904	1_2:+75385221	Msa0092690:three_prime_UTR
AATAGAATGGGTTAATATCG+TGG	0.530353	1_2:+75383040	None:intergenic
GAATTTACTGTACAAAGCTA+TGG	0.531959	1_2:-75383324	None:intergenic
CCACCCATGACGACGGTGAG+AGG	0.533000	1_2:-75384637	None:intergenic
CAAAGTTACAAACAAGAGGA+TGG	0.534199	1_2:-75385137	None:intergenic
AATCCGGCGGTGAGAGTCGA+AGG	0.545936	1_2:+75384743	Msa0092690:CDS
TCCCTTCCTTGCAGAAGATG+GGG	0.546203	1_2:-75384693	None:intergenic
AATCGAGCATCCTGAATTAG+TGG	0.550154	1_2:-75384593	None:intergenic
CAACCACCATATAAGAGCTA+CGG	0.552833	1_2:+75384886	Msa0092690:three_prime_UTR
AGTCGTTGACGGCGAAGTTG+AGG	0.554697	1_2:-75384024	None:intergenic
AACCACCATATAAGAGCTAC+GGG	0.555576	1_2:+75384887	Msa0092690:three_prime_UTR
TAATGTATGGTTAATTCATG+CGG	0.557043	1_2:-75383101	None:intergenic
CACCCATGACGACGGTGAGA+GGG	0.562391	1_2:-75384636	None:intergenic
TTGGATGTCCTAGTTTGAAG+AGG	0.567788	1_2:+75384920	Msa0092690:three_prime_UTR
AAGGAAGGGAGGATGTGTTC+GGG	0.568345	1_2:+75384706	Msa0092690:CDS
AGAAAAGAAAATTTCGACGA+AGG	0.572219	1_2:+75383948	Msa0092690:five_prime_UTR
GCCACCGGAAGGATCTGCTC+GGG	0.575084	1_2:-75384048	None:intergenic
TTGGTGAGAATTGTGTCCAA+GGG	0.586012	1_2:-75384221	None:intergenic
CTTACAAAGTTACAAACAAG+AGG	0.586457	1_2:-75385141	None:intergenic
CCTCTCACCGTCGTCATGGG+TGG	0.588491	1_2:+75384637	Msa0092690:CDS
ATCCCGTAGCTCTTATATGG+TGG	0.589075	1_2:-75384889	None:intergenic
CTTGGTGAGAATTGTGTCCA+AGG	0.590478	1_2:-75384222	None:intergenic
GCAGGATGATGATTGTGATA+CGG	0.592153	1_2:+75384496	Msa0092690:intron
AATGTATGGTTAATTCATGC+GGG	0.595664	1_2:-75383100	None:intergenic
AGTGGGTTAGCTACTCTGCT+CGG	0.596257	1_2:-75384575	None:intergenic
TGCCACCGGAAGGATCTGCT+CGG	0.596625	1_2:-75384049	None:intergenic
AGGATTCGATTGCCTTGACA+GGG	0.597575	1_2:+75384763	Msa0092690:CDS
ATAGAATGGGTTAATATCGT+GGG	0.604680	1_2:+75383041	None:intergenic
CCATCTTCTGCAAGGAAGGG+AGG	0.605126	1_2:+75384695	Msa0092690:CDS
CCCTTCCTTGCAGAAGATGG+GGG	0.610451	1_2:-75384692	None:intergenic
ACCCATGACGACGGTGAGAG+GGG	0.613698	1_2:-75384635	None:intergenic
AATCCTTCGACTCTCACCGC+CGG	0.616188	1_2:-75384746	None:intergenic
CAGTAAATTCATTCAACACA+AGG	0.616519	1_2:+75383337	Msa0092690:five_prime_UTR
TTTCGACGAAGGAAGATGAA+CGG	0.620932	1_2:+75383959	Msa0092690:exon
AATTACGGCTGTCCCTGTCA+AGG	0.629306	1_2:-75384775	None:intergenic
ATCGAGCATCCTGAATTAGT+GGG	0.630666	1_2:-75384592	None:intergenic
GGCGGCGACGAGGCTACTGG+AGG	0.632101	1_2:-75384530	None:intergenic
AAATTCACCTGAGATGCCAC+CGG	0.634810	1_2:-75384063	None:intergenic
AAGAAATGAAGAGGTGCAGG+TGG	0.635822	1_2:-75383239	None:intergenic
TAAATATAAAGCAACGAGTG+TGG	0.638706	1_2:+75383185	Msa0092690:five_prime_UTR
TCACCTGAGATGCCACCGGA+AGG	0.642394	1_2:-75384059	None:intergenic
CGAAGTTGAGGAGTCCGACA+CGG	0.647237	1_2:-75384012	None:intergenic
GGAACCACCACCCATGACGA+CGG	0.659927	1_2:-75384644	None:intergenic
GCAGATGAGTTTGAATCACA+CGG	0.662013	1_2:-75384191	None:intergenic
TGTTGTTCTAAGCCAGAGCA+GGG	0.670625	1_2:-75384805	None:intergenic
ATGATGTGATATTACGCGGG+AGG	0.672546	1_2:+75383072	Msa0092690:five_prime_UTR
ACCCGAGCAGATCCTTCCGG+TGG	0.672658	1_2:+75384047	Msa0092690:CDS
AATTCAGGATGCTCGATTCG+GGG	0.678593	1_2:+75384598	Msa0092690:CDS
TATATAGTGACTAAATAATG+CGG	0.682777	1_2:+75385045	Msa0092690:three_prime_UTR
AGTTGAGGAGTCCGACACGG+CGG	0.682882	1_2:-75384009	None:intergenic
TTGAGGAGTCCGACACGGCG+GGG	0.686362	1_2:-75384007	None:intergenic
GCGGGGCTTAGGGCAAACGA+CGG	0.692402	1_2:-75383990	None:intergenic
AAAATGATGTGATATTACGC+GGG	0.699449	1_2:+75383069	Msa0092690:five_prime_UTR
GTAAGTAGAAGAGTCATTAG+GGG	0.703281	1_2:+75385159	Msa0092690:three_prime_UTR
CTTGGACACAATTCTCACCA+AGG	0.706031	1_2:+75384223	Msa0092690:CDS
GTATGGTTAATTCATGCGGG+CGG	0.716668	1_2:-75383097	None:intergenic
TGGTTGTAGAAGAAATGAAG+AGG	0.719069	1_2:-75383248	None:intergenic
GGGTTAGCTACTCTGCTCGG+CGG	0.725325	1_2:-75384572	None:intergenic
AAAGTAAAGAGGATGTTGTG+TGG	0.752917	1_2:-75383268	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATAGTTTTGTTTTAATTTTA+TGG	+	chr1_2:75383600-75383619	Msa0092690:intron	10.0%
!!	AAATTCATATAAAATAATAG+AGG	-	chr1_2:75384258-75384277	None:intergenic	10.0%
!!!	CTATTATTTTATATGAATTT+AGG	+	chr1_2:75384258-75384277	Msa0092690:intron	10.0%
!!!	CTATTATTTTATATGAATTT+AGG	+	chr1_2:75384258-75384277	Msa0092690:intron	10.0%
!!!	ATAGTTTTGTTTTAATTTTA+TGG	+	chr1_2:75383600-75383619	Msa0092690:intron	10.0%
!!	AAATTCATATAAAATAATAG+AGG	-	chr1_2:75384258-75384277	None:intergenic	10.0%
!!!	CTATTATTTTATATGAATTT+AGG	+	chr1_2:75384258-75384277	Msa0092690:intron	10.0%
!!!	CTATTATTTTATATGAATTT+AGG	+	chr1_2:75384258-75384277	Msa0092690:intron	10.0%
!!!	AAGATATTTTTAGTAATGTA+TGG	-	chr1_2:75383117-75383136	None:intergenic	15.0%
!!	AGAAATAGAAATAGAATAAA+AGG	-	chr1_2:75383415-75383434	None:intergenic	15.0%
!!	AAAATTTCATCATGAAAAAA+CGG	-	chr1_2:75383533-75383552	None:intergenic	15.0%
!!!	TGTTTTATTTGTTAGTTTAA+CGG	+	chr1_2:75383576-75383595	Msa0092690:intron	15.0%
!!!	AACGTGTTTATAATTTATTT+TGG	+	chr1_2:75383715-75383734	Msa0092690:intron	15.0%
!!!	ATATGAATTTAGGTTAAAAT+TGG	+	chr1_2:75384268-75384287	Msa0092690:intron	15.0%
!!!	AATTGATCTATTTTTAACAT+TGG	+	chr1_2:75384336-75384355	Msa0092690:intron	15.0%
!!!	TTCATTTTGATTTTCTTTTA+TGG	+	chr1_2:75385192-75385211	Msa0092690:three_prime_UTR	15.0%
!!!	TCATTTTGATTTTCTTTTAT+GGG	+	chr1_2:75385193-75385212	Msa0092690:three_prime_UTR	15.0%
!!!	AAGATATTTTTAGTAATGTA+TGG	-	chr1_2:75383117-75383136	None:intergenic	15.0%
!!	AGAAATAGAAATAGAATAAA+AGG	-	chr1_2:75383415-75383434	None:intergenic	15.0%
!!	AAAATTTCATCATGAAAAAA+CGG	-	chr1_2:75383533-75383552	None:intergenic	15.0%
!!!	TGTTTTATTTGTTAGTTTAA+CGG	+	chr1_2:75383576-75383595	Msa0092690:intron	15.0%
!!!	AACGTGTTTATAATTTATTT+TGG	+	chr1_2:75383715-75383734	Msa0092690:intron	15.0%
!!!	ATATGAATTTAGGTTAAAAT+TGG	+	chr1_2:75384268-75384287	Msa0092690:intron	15.0%
!!!	AATTGATCTATTTTTAACAT+TGG	+	chr1_2:75384336-75384355	Msa0092690:intron	15.0%
!!!	TTCATTTTGATTTTCTTTTA+TGG	+	chr1_2:75385192-75385211	Msa0092690:three_prime_UTR	15.0%
!!!	TCATTTTGATTTTCTTTTAT+GGG	+	chr1_2:75385193-75385212	Msa0092690:three_prime_UTR	15.0%
!!	AGAAATAGAATAAAAGGAAA+CGG	-	chr1_2:75383409-75383428	None:intergenic	20.0%
!!	TTGAATATATGTGGAAAAAA+TGG	-	chr1_2:75383465-75383484	None:intergenic	20.0%
!!	AGATTAAAGTTGAATATATG+TGG	-	chr1_2:75383474-75383493	None:intergenic	20.0%
!!	CGAAAAAACAATAACAATTA+AGG	+	chr1_2:75383658-75383677	Msa0092690:intron	20.0%
!!!	TTTTCTCTTTTAATTTGCTT+TGG	+	chr1_2:75384108-75384127	Msa0092690:intron	20.0%
!!	TATATAGTGACTAAATAATG+CGG	+	chr1_2:75385045-75385064	Msa0092690:three_prime_UTR	20.0%
!!	TAGTTACAATTACAATTCAT+AGG	-	chr1_2:75385220-75385239	None:intergenic	20.0%
!!	AGAAATAGAATAAAAGGAAA+CGG	-	chr1_2:75383409-75383428	None:intergenic	20.0%
!!	TTGAATATATGTGGAAAAAA+TGG	-	chr1_2:75383465-75383484	None:intergenic	20.0%
!!	AGATTAAAGTTGAATATATG+TGG	-	chr1_2:75383474-75383493	None:intergenic	20.0%
!!	CGAAAAAACAATAACAATTA+AGG	+	chr1_2:75383658-75383677	Msa0092690:intron	20.0%
!!!	TTTTCTCTTTTAATTTGCTT+TGG	+	chr1_2:75384108-75384127	Msa0092690:intron	20.0%
!!	TATATAGTGACTAAATAATG+CGG	+	chr1_2:75385045-75385064	Msa0092690:three_prime_UTR	20.0%
!!	TAGTTACAATTACAATTCAT+AGG	-	chr1_2:75385220-75385239	None:intergenic	20.0%
!	AAAAATGATGTGATATTACG+CGG	+	chr1_2:75383068-75383087	Msa0092690:five_prime_UTR	25.0%
!	TAATGTATGGTTAATTCATG+CGG	-	chr1_2:75383104-75383123	None:intergenic	25.0%
!	ATTGAAAGAAGAAAGTAAAG+AGG	-	chr1_2:75383282-75383301	None:intergenic	25.0%
!!!	ATATATCTCGTTCTGAATTT+TGG	+	chr1_2:75383886-75383905	Msa0092690:intron	25.0%
!	GCAAATTAAAAGAGAAAAGA+AGG	-	chr1_2:75384106-75384125	None:intergenic	25.0%
!	AATAGAGGAATTATTTACCT+TGG	-	chr1_2:75384243-75384262	None:intergenic	25.0%
!	TGAATTGTAATTGTAACTAC+CGG	+	chr1_2:75385221-75385240	Msa0092690:three_prime_UTR	25.0%
!!!	ACAAATTTTCCTTTTTAAGC+CGG	-	chr1_2:75385243-75385262	None:intergenic	25.0%
!	AAAAATGATGTGATATTACG+CGG	+	chr1_2:75383068-75383087	Msa0092690:five_prime_UTR	25.0%
!	TAATGTATGGTTAATTCATG+CGG	-	chr1_2:75383104-75383123	None:intergenic	25.0%
!	ATTGAAAGAAGAAAGTAAAG+AGG	-	chr1_2:75383282-75383301	None:intergenic	25.0%
!!!	ATATATCTCGTTCTGAATTT+TGG	+	chr1_2:75383886-75383905	Msa0092690:intron	25.0%
!	GCAAATTAAAAGAGAAAAGA+AGG	-	chr1_2:75384106-75384125	None:intergenic	25.0%
!	AATAGAGGAATTATTTACCT+TGG	-	chr1_2:75384243-75384262	None:intergenic	25.0%
!	TGAATTGTAATTGTAACTAC+CGG	+	chr1_2:75385221-75385240	Msa0092690:three_prime_UTR	25.0%
!!!	ACAAATTTTCCTTTTTAAGC+CGG	-	chr1_2:75385243-75385262	None:intergenic	25.0%
	AAAATGATGTGATATTACGC+GGG	+	chr1_2:75383069-75383088	Msa0092690:five_prime_UTR	30.0%
	AATGTATGGTTAATTCATGC+GGG	-	chr1_2:75383103-75383122	None:intergenic	30.0%
	TAAATATAAAGCAACGAGTG+TGG	+	chr1_2:75383185-75383204	Msa0092690:five_prime_UTR	30.0%
	GAATTTACTGTACAAAGCTA+TGG	-	chr1_2:75383327-75383346	None:intergenic	30.0%
	CAGTAAATTCATTCAACACA+AGG	+	chr1_2:75383337-75383356	Msa0092690:five_prime_UTR	30.0%
	AGAAAAGAAAATTTCGACGA+AGG	+	chr1_2:75383948-75383967	Msa0092690:five_prime_UTR	30.0%
	ACACAAAGCAATTCAACAAA+AGG	-	chr1_2:75384432-75384451	None:intergenic	30.0%
	GACACTAGTACAAGAAATAA+GGG	-	chr1_2:75385110-75385129	None:intergenic	30.0%
	AGACACTAGTACAAGAAATA+AGG	-	chr1_2:75385111-75385130	None:intergenic	30.0%
	CTTACAAAGTTACAAACAAG+AGG	-	chr1_2:75385144-75385163	None:intergenic	30.0%
	TTGTAAGTAGAAGAGTCATT+AGG	+	chr1_2:75385157-75385176	Msa0092690:three_prime_UTR	30.0%
	TGTAAGTAGAAGAGTCATTA+GGG	+	chr1_2:75385158-75385177	Msa0092690:three_prime_UTR	30.0%
	TATTTAGCAACTTGAATGAC+AGG	+	chr1_2:75385302-75385321	Msa0092690:three_prime_UTR	30.0%
	AAAATGATGTGATATTACGC+GGG	+	chr1_2:75383069-75383088	Msa0092690:five_prime_UTR	30.0%
	AATGTATGGTTAATTCATGC+GGG	-	chr1_2:75383103-75383122	None:intergenic	30.0%
	TAAATATAAAGCAACGAGTG+TGG	+	chr1_2:75383185-75383204	Msa0092690:five_prime_UTR	30.0%
	GAATTTACTGTACAAAGCTA+TGG	-	chr1_2:75383327-75383346	None:intergenic	30.0%
	CAGTAAATTCATTCAACACA+AGG	+	chr1_2:75383337-75383356	Msa0092690:five_prime_UTR	30.0%
	AGAAAAGAAAATTTCGACGA+AGG	+	chr1_2:75383948-75383967	Msa0092690:five_prime_UTR	30.0%
	ACACAAAGCAATTCAACAAA+AGG	-	chr1_2:75384432-75384451	None:intergenic	30.0%
	GACACTAGTACAAGAAATAA+GGG	-	chr1_2:75385110-75385129	None:intergenic	30.0%
	AGACACTAGTACAAGAAATA+AGG	-	chr1_2:75385111-75385130	None:intergenic	30.0%
	CTTACAAAGTTACAAACAAG+AGG	-	chr1_2:75385144-75385163	None:intergenic	30.0%
	TTGTAAGTAGAAGAGTCATT+AGG	+	chr1_2:75385157-75385176	Msa0092690:three_prime_UTR	30.0%
	TGTAAGTAGAAGAGTCATTA+GGG	+	chr1_2:75385158-75385177	Msa0092690:three_prime_UTR	30.0%
	TGGTTGTAGAAGAAATGAAG+AGG	-	chr1_2:75383251-75383270	None:intergenic	35.0%
	AAAGTAAAGAGGATGTTGTG+TGG	-	chr1_2:75383271-75383290	None:intergenic	35.0%
	TTAAGGTGATTAGAGCTAAG+CGG	+	chr1_2:75383675-75383694	Msa0092690:intron	35.0%
	GGAAAAATTGTAACAGCTCA+AGG	-	chr1_2:75383768-75383787	None:intergenic	35.0%
	AGAAACGTTCATTTCATGGA+CGG	-	chr1_2:75383789-75383808	None:intergenic	35.0%
	GATGAGAAACGTTCATTTCA+TGG	-	chr1_2:75383793-75383812	None:intergenic	35.0%
!	ACTCTTTTCCTCTTCAAACT+AGG	-	chr1_2:75384931-75384950	None:intergenic	35.0%
!	GTCAATAGTGTCTCTTGTTT+AGG	+	chr1_2:75385019-75385038	Msa0092690:three_prime_UTR	35.0%
	GTGACTAAATAATGCGGTTA+AGG	+	chr1_2:75385051-75385070	Msa0092690:three_prime_UTR	35.0%
	TTGCAGATTGAGGGTTAATT+TGG	+	chr1_2:75385074-75385093	Msa0092690:three_prime_UTR	35.0%
	TGCAGATTGAGGGTTAATTT+GGG	+	chr1_2:75385075-75385094	Msa0092690:three_prime_UTR	35.0%
	CAAAGTTACAAACAAGAGGA+TGG	-	chr1_2:75385140-75385159	None:intergenic	35.0%
	GTAAGTAGAAGAGTCATTAG+GGG	+	chr1_2:75385159-75385178	Msa0092690:three_prime_UTR	35.0%
!!	TTGTAACTACCGGCTTAAAA+AGG	+	chr1_2:75385231-75385250	Msa0092690:three_prime_UTR	35.0%
	TGGTTGTAGAAGAAATGAAG+AGG	-	chr1_2:75383251-75383270	None:intergenic	35.0%
	AAAGTAAAGAGGATGTTGTG+TGG	-	chr1_2:75383271-75383290	None:intergenic	35.0%
	TTAAGGTGATTAGAGCTAAG+CGG	+	chr1_2:75383675-75383694	Msa0092690:intron	35.0%
	GGAAAAATTGTAACAGCTCA+AGG	-	chr1_2:75383768-75383787	None:intergenic	35.0%
	AGAAACGTTCATTTCATGGA+CGG	-	chr1_2:75383789-75383808	None:intergenic	35.0%
	GATGAGAAACGTTCATTTCA+TGG	-	chr1_2:75383793-75383812	None:intergenic	35.0%
!	ACTCTTTTCCTCTTCAAACT+AGG	-	chr1_2:75384931-75384950	None:intergenic	35.0%
!	GTCAATAGTGTCTCTTGTTT+AGG	+	chr1_2:75385019-75385038	Msa0092690:three_prime_UTR	35.0%
	GTGACTAAATAATGCGGTTA+AGG	+	chr1_2:75385051-75385070	Msa0092690:three_prime_UTR	35.0%
	TTGCAGATTGAGGGTTAATT+TGG	+	chr1_2:75385074-75385093	Msa0092690:three_prime_UTR	35.0%
	TGCAGATTGAGGGTTAATTT+GGG	+	chr1_2:75385075-75385094	Msa0092690:three_prime_UTR	35.0%
	CAAAGTTACAAACAAGAGGA+TGG	-	chr1_2:75385140-75385159	None:intergenic	35.0%
	GTAAGTAGAAGAGTCATTAG+GGG	+	chr1_2:75385159-75385178	Msa0092690:three_prime_UTR	35.0%
!!	TTGTAACTACCGGCTTAAAA+AGG	+	chr1_2:75385231-75385250	Msa0092690:three_prime_UTR	35.0%
!	TAGAAGAAATGAAGAGGTGC+AGG	-	chr1_2:75383245-75383264	None:intergenic	40.0%
	AACAGCTCAAGGTTAAGATC+TGG	-	chr1_2:75383757-75383776	None:intergenic	40.0%
	TTTCGACGAAGGAAGATGAA+CGG	+	chr1_2:75383959-75383978	Msa0092690:exon	40.0%
	TTGAATCACACGGTTCAACT+TGG	-	chr1_2:75384184-75384203	None:intergenic	40.0%
	GCAGATGAGTTTGAATCACA+CGG	-	chr1_2:75384194-75384213	None:intergenic	40.0%
	TTGGTGAGAATTGTGTCCAA+GGG	-	chr1_2:75384224-75384243	None:intergenic	40.0%
!!	GTTGTGCTTTTGTGATTTGC+AGG	+	chr1_2:75384478-75384497	Msa0092690:intron	40.0%
	GCAGGATGATGATTGTGATA+CGG	+	chr1_2:75384496-75384515	Msa0092690:intron	40.0%
	AGTAGCTAACCCACTAATTC+AGG	+	chr1_2:75384583-75384602	Msa0092690:CDS	40.0%
	ATCGAGCATCCTGAATTAGT+GGG	-	chr1_2:75384595-75384614	None:intergenic	40.0%
	AATCGAGCATCCTGAATTAG+TGG	-	chr1_2:75384596-75384615	None:intergenic	40.0%
	CTAATTCAGGATGCTCGATT+CGG	+	chr1_2:75384596-75384615	Msa0092690:CDS	40.0%
	TAATTCAGGATGCTCGATTC+GGG	+	chr1_2:75384597-75384616	Msa0092690:CDS	40.0%
!!	GGCCAATTTTGGTAACAATC+CGG	+	chr1_2:75384727-75384746	Msa0092690:CDS	40.0%
!!	CAATTTTGGTAACAATCCGG+CGG	+	chr1_2:75384730-75384749	Msa0092690:CDS	40.0%
	CAACCACCATATAAGAGCTA+CGG	+	chr1_2:75384886-75384905	Msa0092690:three_prime_UTR	40.0%
	AACCACCATATAAGAGCTAC+GGG	+	chr1_2:75384887-75384906	Msa0092690:three_prime_UTR	40.0%
	CTTATCCCGTAGCTCTTATA+TGG	-	chr1_2:75384895-75384914	None:intergenic	40.0%
	CATATAAGAGCTACGGGATA+AGG	+	chr1_2:75384893-75384912	Msa0092690:three_prime_UTR	40.0%
!	AGCTACGGGATAAGGAATTT+TGG	+	chr1_2:75384901-75384920	Msa0092690:three_prime_UTR	40.0%
	TTGGATGTCCTAGTTTGAAG+AGG	+	chr1_2:75384920-75384939	Msa0092690:three_prime_UTR	40.0%
!	TAGAAGAAATGAAGAGGTGC+AGG	-	chr1_2:75383245-75383264	None:intergenic	40.0%
	AACAGCTCAAGGTTAAGATC+TGG	-	chr1_2:75383757-75383776	None:intergenic	40.0%
	TTTCGACGAAGGAAGATGAA+CGG	+	chr1_2:75383959-75383978	Msa0092690:exon	40.0%
	TTGAATCACACGGTTCAACT+TGG	-	chr1_2:75384184-75384203	None:intergenic	40.0%
	GCAGATGAGTTTGAATCACA+CGG	-	chr1_2:75384194-75384213	None:intergenic	40.0%
	TTGGTGAGAATTGTGTCCAA+GGG	-	chr1_2:75384224-75384243	None:intergenic	40.0%
!!	GTTGTGCTTTTGTGATTTGC+AGG	+	chr1_2:75384478-75384497	Msa0092690:intron	40.0%
	GCAGGATGATGATTGTGATA+CGG	+	chr1_2:75384496-75384515	Msa0092690:intron	40.0%
	AGTAGCTAACCCACTAATTC+AGG	+	chr1_2:75384583-75384602	Msa0092690:CDS	40.0%
	ATCGAGCATCCTGAATTAGT+GGG	-	chr1_2:75384595-75384614	None:intergenic	40.0%
	AATCGAGCATCCTGAATTAG+TGG	-	chr1_2:75384596-75384615	None:intergenic	40.0%
	CTAATTCAGGATGCTCGATT+CGG	+	chr1_2:75384596-75384615	Msa0092690:CDS	40.0%
	TAATTCAGGATGCTCGATTC+GGG	+	chr1_2:75384597-75384616	Msa0092690:CDS	40.0%
!!	GGCCAATTTTGGTAACAATC+CGG	+	chr1_2:75384727-75384746	Msa0092690:CDS	40.0%
!!	CAATTTTGGTAACAATCCGG+CGG	+	chr1_2:75384730-75384749	Msa0092690:CDS	40.0%
	CAACCACCATATAAGAGCTA+CGG	+	chr1_2:75384886-75384905	Msa0092690:three_prime_UTR	40.0%
	AACCACCATATAAGAGCTAC+GGG	+	chr1_2:75384887-75384906	Msa0092690:three_prime_UTR	40.0%
	CTTATCCCGTAGCTCTTATA+TGG	-	chr1_2:75384895-75384914	None:intergenic	40.0%
	CATATAAGAGCTACGGGATA+AGG	+	chr1_2:75384893-75384912	Msa0092690:three_prime_UTR	40.0%
!	AGCTACGGGATAAGGAATTT+TGG	+	chr1_2:75384901-75384920	Msa0092690:three_prime_UTR	40.0%
	TTGGATGTCCTAGTTTGAAG+AGG	+	chr1_2:75384920-75384939	Msa0092690:three_prime_UTR	40.0%
	ATGATGTGATATTACGCGGG+AGG	+	chr1_2:75383072-75383091	Msa0092690:five_prime_UTR	45.0%
	GTATGGTTAATTCATGCGGG+CGG	-	chr1_2:75383100-75383119	None:intergenic	45.0%
!	AAGAAATGAAGAGGTGCAGG+TGG	-	chr1_2:75383242-75383261	None:intergenic	45.0%
	AAATTCACCTGAGATGCCAC+CGG	-	chr1_2:75384066-75384085	None:intergenic	45.0%
	CTTGGTGAGAATTGTGTCCA+AGG	-	chr1_2:75384225-75384244	None:intergenic	45.0%
	CTTGGACACAATTCTCACCA+AGG	+	chr1_2:75384223-75384242	Msa0092690:CDS	45.0%
!	AATTCAGGATGCTCGATTCG+GGG	+	chr1_2:75384598-75384617	Msa0092690:CDS	45.0%
	CGCCGGATTGTTACCAAAAT+TGG	-	chr1_2:75384732-75384751	None:intergenic	45.0%
	AAGGATTCGATTGCCTTGAC+AGG	+	chr1_2:75384762-75384781	Msa0092690:CDS	45.0%
	AGGATTCGATTGCCTTGACA+GGG	+	chr1_2:75384763-75384782	Msa0092690:CDS	45.0%
!	TGTTGTTCTAAGCCAGAGCA+GGG	-	chr1_2:75384808-75384827	None:intergenic	45.0%
	ATCCCGTAGCTCTTATATGG+TGG	-	chr1_2:75384892-75384911	None:intergenic	45.0%
	CGGTTAAGGTTGCAGATTGA+GGG	+	chr1_2:75385065-75385084	Msa0092690:three_prime_UTR	45.0%
	GTAGAAGAGTCATTAGGGGA+TGG	+	chr1_2:75385163-75385182	Msa0092690:three_prime_UTR	45.0%
	ATGATGTGATATTACGCGGG+AGG	+	chr1_2:75383072-75383091	Msa0092690:five_prime_UTR	45.0%
	GTATGGTTAATTCATGCGGG+CGG	-	chr1_2:75383100-75383119	None:intergenic	45.0%
!	AAGAAATGAAGAGGTGCAGG+TGG	-	chr1_2:75383242-75383261	None:intergenic	45.0%
	AAATTCACCTGAGATGCCAC+CGG	-	chr1_2:75384066-75384085	None:intergenic	45.0%
	CTTGGTGAGAATTGTGTCCA+AGG	-	chr1_2:75384225-75384244	None:intergenic	45.0%
	CTTGGACACAATTCTCACCA+AGG	+	chr1_2:75384223-75384242	Msa0092690:CDS	45.0%
!	AATTCAGGATGCTCGATTCG+GGG	+	chr1_2:75384598-75384617	Msa0092690:CDS	45.0%
	CGCCGGATTGTTACCAAAAT+TGG	-	chr1_2:75384732-75384751	None:intergenic	45.0%
	AAGGATTCGATTGCCTTGAC+AGG	+	chr1_2:75384762-75384781	Msa0092690:CDS	45.0%
	AGGATTCGATTGCCTTGACA+GGG	+	chr1_2:75384763-75384782	Msa0092690:CDS	45.0%
!	TGTTGTTCTAAGCCAGAGCA+GGG	-	chr1_2:75384808-75384827	None:intergenic	45.0%
	ATCCCGTAGCTCTTATATGG+TGG	-	chr1_2:75384892-75384911	None:intergenic	45.0%
	CGGTTAAGGTTGCAGATTGA+GGG	+	chr1_2:75385065-75385084	Msa0092690:three_prime_UTR	45.0%
	GTAGAAGAGTCATTAGGGGA+TGG	+	chr1_2:75385163-75385182	Msa0092690:three_prime_UTR	45.0%
	GTGGAACTGCAAGCAAGCTT+GGG	-	chr1_2:75383223-75383242	None:intergenic	50.0%
	CTCATCTGCGTCAAATCCCT+TGG	+	chr1_2:75384205-75384224	Msa0092690:CDS	50.0%
	GGAGACCCACAGAAAAATGG+GGG	-	chr1_2:75384554-75384573	None:intergenic	50.0%
	CGGAGACCCACAGAAAAATG+GGG	-	chr1_2:75384555-75384574	None:intergenic	50.0%
	GCGGAGACCCACAGAAAAAT+GGG	-	chr1_2:75384556-75384575	None:intergenic	50.0%
!!	AGTGGGTTAGCTACTCTGCT+CGG	-	chr1_2:75384578-75384597	None:intergenic	50.0%
	TCCCTTCCTTGCAGAAGATG+GGG	-	chr1_2:75384696-75384715	None:intergenic	50.0%
	CTCCCTTCCTTGCAGAAGAT+GGG	-	chr1_2:75384697-75384716	None:intergenic	50.0%
	CAAGGAAGGGAGGATGTGTT+CGG	+	chr1_2:75384705-75384724	Msa0092690:CDS	50.0%
	AAGGAAGGGAGGATGTGTTC+GGG	+	chr1_2:75384706-75384725	Msa0092690:CDS	50.0%
!	GGATGTGTTCGGGCCAATTT+TGG	+	chr1_2:75384716-75384735	Msa0092690:CDS	50.0%
	AATTACGGCTGTCCCTGTCA+AGG	-	chr1_2:75384778-75384797	None:intergenic	50.0%
	GAGCAGGGATGCTGCAATTA+CGG	-	chr1_2:75384793-75384812	None:intergenic	50.0%
	TAATTGCAGCATCCCTGCTC+TGG	+	chr1_2:75384793-75384812	Msa0092690:CDS	50.0%
!	CTGTTGTTCTAAGCCAGAGC+AGG	-	chr1_2:75384809-75384828	None:intergenic	50.0%
	GCGGTTAAGGTTGCAGATTG+AGG	+	chr1_2:75385064-75385083	Msa0092690:three_prime_UTR	50.0%
	GTGGAACTGCAAGCAAGCTT+GGG	-	chr1_2:75383223-75383242	None:intergenic	50.0%
	CTCATCTGCGTCAAATCCCT+TGG	+	chr1_2:75384205-75384224	Msa0092690:CDS	50.0%
	GGAGACCCACAGAAAAATGG+GGG	-	chr1_2:75384554-75384573	None:intergenic	50.0%
	CGGAGACCCACAGAAAAATG+GGG	-	chr1_2:75384555-75384574	None:intergenic	50.0%
	GCGGAGACCCACAGAAAAAT+GGG	-	chr1_2:75384556-75384575	None:intergenic	50.0%
!!	AGTGGGTTAGCTACTCTGCT+CGG	-	chr1_2:75384578-75384597	None:intergenic	50.0%
	TCCCTTCCTTGCAGAAGATG+GGG	-	chr1_2:75384696-75384715	None:intergenic	50.0%
	CTCCCTTCCTTGCAGAAGAT+GGG	-	chr1_2:75384697-75384716	None:intergenic	50.0%
	CAAGGAAGGGAGGATGTGTT+CGG	+	chr1_2:75384705-75384724	Msa0092690:CDS	50.0%
	AAGGAAGGGAGGATGTGTTC+GGG	+	chr1_2:75384706-75384725	Msa0092690:CDS	50.0%
!	GGATGTGTTCGGGCCAATTT+TGG	+	chr1_2:75384716-75384735	Msa0092690:CDS	50.0%
	AATTACGGCTGTCCCTGTCA+AGG	-	chr1_2:75384778-75384797	None:intergenic	50.0%
	GAGCAGGGATGCTGCAATTA+CGG	-	chr1_2:75384793-75384812	None:intergenic	50.0%
	TAATTGCAGCATCCCTGCTC+TGG	+	chr1_2:75384793-75384812	Msa0092690:CDS	50.0%
!	CTGTTGTTCTAAGCCAGAGC+AGG	-	chr1_2:75384809-75384828	None:intergenic	50.0%
	GCGGTTAAGGTTGCAGATTG+AGG	+	chr1_2:75385064-75385083	Msa0092690:three_prime_UTR	50.0%
	GGTGGAACTGCAAGCAAGCT+TGG	-	chr1_2:75383224-75383243	None:intergenic	55.0%
	CGAAGTTGAGGAGTCCGACA+CGG	-	chr1_2:75384015-75384034	None:intergenic	55.0%
	AGTCGTTGACGGCGAAGTTG+AGG	-	chr1_2:75384027-75384046	None:intergenic	55.0%
	TCTGCTCGGGTAGTCGTTGA+CGG	-	chr1_2:75384038-75384057	None:intergenic	55.0%
	ACTACCCGAGCAGATCCTTC+CGG	+	chr1_2:75384044-75384063	Msa0092690:CDS	55.0%
	GACCCACAGAAAAATGGGGG+CGG	-	chr1_2:75384551-75384570	None:intergenic	55.0%
	GGCGGAGACCCACAGAAAAA+TGG	-	chr1_2:75384557-75384576	None:intergenic	55.0%
	CTTGCAGAAGATGGGGGAGA+AGG	-	chr1_2:75384689-75384708	None:intergenic	55.0%
	CTTCTCCCCCATCTTCTGCA+AGG	+	chr1_2:75384687-75384706	Msa0092690:CDS	55.0%
	TCCCCCATCTTCTGCAAGGA+AGG	+	chr1_2:75384691-75384710	Msa0092690:CDS	55.0%
	CCCTTCCTTGCAGAAGATGG+GGG	-	chr1_2:75384695-75384714	None:intergenic	55.0%
	CCCCCATCTTCTGCAAGGAA+GGG	+	chr1_2:75384692-75384711	Msa0092690:CDS	55.0%
	CCTCCCTTCCTTGCAGAAGA+TGG	-	chr1_2:75384698-75384717	None:intergenic	55.0%
	CCATCTTCTGCAAGGAAGGG+AGG	+	chr1_2:75384695-75384714	Msa0092690:CDS	55.0%
	AATCCTTCGACTCTCACCGC+CGG	-	chr1_2:75384749-75384768	None:intergenic	55.0%
	GGTGGAACTGCAAGCAAGCT+TGG	-	chr1_2:75383224-75383243	None:intergenic	55.0%
	CGAAGTTGAGGAGTCCGACA+CGG	-	chr1_2:75384015-75384034	None:intergenic	55.0%
	AGTCGTTGACGGCGAAGTTG+AGG	-	chr1_2:75384027-75384046	None:intergenic	55.0%
	TCTGCTCGGGTAGTCGTTGA+CGG	-	chr1_2:75384038-75384057	None:intergenic	55.0%
	ACTACCCGAGCAGATCCTTC+CGG	+	chr1_2:75384044-75384063	Msa0092690:CDS	55.0%
	GACCCACAGAAAAATGGGGG+CGG	-	chr1_2:75384551-75384570	None:intergenic	55.0%
	GGCGGAGACCCACAGAAAAA+TGG	-	chr1_2:75384557-75384576	None:intergenic	55.0%
	CTTGCAGAAGATGGGGGAGA+AGG	-	chr1_2:75384689-75384708	None:intergenic	55.0%
	CTTCTCCCCCATCTTCTGCA+AGG	+	chr1_2:75384687-75384706	Msa0092690:CDS	55.0%
	TCCCCCATCTTCTGCAAGGA+AGG	+	chr1_2:75384691-75384710	Msa0092690:CDS	55.0%
	CCCTTCCTTGCAGAAGATGG+GGG	-	chr1_2:75384695-75384714	None:intergenic	55.0%
	CCCCCATCTTCTGCAAGGAA+GGG	+	chr1_2:75384692-75384711	Msa0092690:CDS	55.0%
	CCTCCCTTCCTTGCAGAAGA+TGG	-	chr1_2:75384698-75384717	None:intergenic	55.0%
	CCATCTTCTGCAAGGAAGGG+AGG	+	chr1_2:75384695-75384714	Msa0092690:CDS	55.0%
	AATCCTTCGACTCTCACCGC+CGG	-	chr1_2:75384749-75384768	None:intergenic	55.0%
	AGTTGAGGAGTCCGACACGG+CGG	-	chr1_2:75384012-75384031	None:intergenic	60.0%
	TGCCACCGGAAGGATCTGCT+CGG	-	chr1_2:75384052-75384071	None:intergenic	60.0%
	GATCCTTCCGGTGGCATCTC+AGG	+	chr1_2:75384056-75384075	Msa0092690:CDS	60.0%
	TCACCTGAGATGCCACCGGA+AGG	-	chr1_2:75384062-75384081	None:intergenic	60.0%
!!	TCGCCGCCCCCATTTTTCTG+TGG	+	chr1_2:75384545-75384564	Msa0092690:CDS	60.0%
!!	CGCCGCCCCCATTTTTCTGT+GGG	+	chr1_2:75384546-75384565	Msa0092690:CDS	60.0%
!!	GGGTTAGCTACTCTGCTCGG+CGG	-	chr1_2:75384575-75384594	None:intergenic	60.0%
	ACCCATGACGACGGTGAGAG+GGG	-	chr1_2:75384638-75384657	None:intergenic	60.0%
	CACCCATGACGACGGTGAGA+GGG	-	chr1_2:75384639-75384658	None:intergenic	60.0%
	GGAACCACCACCCATGACGA+CGG	-	chr1_2:75384647-75384666	None:intergenic	60.0%
	AGAAGGTGGCAGACCGGATG+GGG	-	chr1_2:75384672-75384691	None:intergenic	60.0%
	GAGAAGGTGGCAGACCGGAT+GGG	-	chr1_2:75384673-75384692	None:intergenic	60.0%
	GCAGAAGATGGGGGAGAAGG+TGG	-	chr1_2:75384686-75384705	None:intergenic	60.0%
	AATCCGGCGGTGAGAGTCGA+AGG	+	chr1_2:75384743-75384762	Msa0092690:CDS	60.0%
	AGTTGAGGAGTCCGACACGG+CGG	-	chr1_2:75384012-75384031	None:intergenic	60.0%
	TGCCACCGGAAGGATCTGCT+CGG	-	chr1_2:75384052-75384071	None:intergenic	60.0%
	GATCCTTCCGGTGGCATCTC+AGG	+	chr1_2:75384056-75384075	Msa0092690:CDS	60.0%
	TCACCTGAGATGCCACCGGA+AGG	-	chr1_2:75384062-75384081	None:intergenic	60.0%
!!	TCGCCGCCCCCATTTTTCTG+TGG	+	chr1_2:75384545-75384564	Msa0092690:CDS	60.0%
!!	CGCCGCCCCCATTTTTCTGT+GGG	+	chr1_2:75384546-75384565	Msa0092690:CDS	60.0%
!!	GGGTTAGCTACTCTGCTCGG+CGG	-	chr1_2:75384575-75384594	None:intergenic	60.0%
	ACCCATGACGACGGTGAGAG+GGG	-	chr1_2:75384638-75384657	None:intergenic	60.0%
	CACCCATGACGACGGTGAGA+GGG	-	chr1_2:75384639-75384658	None:intergenic	60.0%
	GGAACCACCACCCATGACGA+CGG	-	chr1_2:75384647-75384666	None:intergenic	60.0%
	AGAAGGTGGCAGACCGGATG+GGG	-	chr1_2:75384672-75384691	None:intergenic	60.0%
	GAGAAGGTGGCAGACCGGAT+GGG	-	chr1_2:75384673-75384692	None:intergenic	60.0%
	GCAGAAGATGGGGGAGAAGG+TGG	-	chr1_2:75384686-75384705	None:intergenic	60.0%
	AATCCGGCGGTGAGAGTCGA+AGG	+	chr1_2:75384743-75384762	Msa0092690:CDS	60.0%
	GCGGGGCTTAGGGCAAACGA+CGG	-	chr1_2:75383993-75384012	None:intergenic	65.0%
	TTGAGGAGTCCGACACGGCG+GGG	-	chr1_2:75384010-75384029	None:intergenic	65.0%
	GTTGAGGAGTCCGACACGGC+GGG	-	chr1_2:75384011-75384030	None:intergenic	65.0%
	ACCCGAGCAGATCCTTCCGG+TGG	+	chr1_2:75384047-75384066	Msa0092690:CDS	65.0%
	GCCACCGGAAGGATCTGCTC+GGG	-	chr1_2:75384051-75384070	None:intergenic	65.0%
	GAAAAATGGGGGCGGCGACG+AGG	-	chr1_2:75384543-75384562	None:intergenic	65.0%
	GCCCCTCTCACCGTCGTCAT+GGG	+	chr1_2:75384634-75384653	Msa0092690:CDS	65.0%
	CCACCCATGACGACGGTGAG+AGG	-	chr1_2:75384640-75384659	None:intergenic	65.0%
	CCTCTCACCGTCGTCATGGG+TGG	+	chr1_2:75384637-75384656	Msa0092690:CDS	65.0%
	CTCACCGTCGTCATGGGTGG+TGG	+	chr1_2:75384640-75384659	Msa0092690:CDS	65.0%
	GTGGTGGTTCCTGCCCCATC+CGG	+	chr1_2:75384656-75384675	Msa0092690:CDS	65.0%
	GGAGAAGGTGGCAGACCGGA+TGG	-	chr1_2:75384674-75384693	None:intergenic	65.0%
	TGGGGGAGAAGGTGGCAGAC+CGG	-	chr1_2:75384678-75384697	None:intergenic	65.0%
	GCGGGGCTTAGGGCAAACGA+CGG	-	chr1_2:75383993-75384012	None:intergenic	65.0%
	TTGAGGAGTCCGACACGGCG+GGG	-	chr1_2:75384010-75384029	None:intergenic	65.0%
	GTTGAGGAGTCCGACACGGC+GGG	-	chr1_2:75384011-75384030	None:intergenic	65.0%
	ACCCGAGCAGATCCTTCCGG+TGG	+	chr1_2:75384047-75384066	Msa0092690:CDS	65.0%
	GCCACCGGAAGGATCTGCTC+GGG	-	chr1_2:75384051-75384070	None:intergenic	65.0%
	GAAAAATGGGGGCGGCGACG+AGG	-	chr1_2:75384543-75384562	None:intergenic	65.0%
	GCCCCTCTCACCGTCGTCAT+GGG	+	chr1_2:75384634-75384653	Msa0092690:CDS	65.0%
	CCACCCATGACGACGGTGAG+AGG	-	chr1_2:75384640-75384659	None:intergenic	65.0%
	CCTCTCACCGTCGTCATGGG+TGG	+	chr1_2:75384637-75384656	Msa0092690:CDS	65.0%
	CTCACCGTCGTCATGGGTGG+TGG	+	chr1_2:75384640-75384659	Msa0092690:CDS	65.0%
	GTGGTGGTTCCTGCCCCATC+CGG	+	chr1_2:75384656-75384675	Msa0092690:CDS	65.0%
	GGAGAAGGTGGCAGACCGGA+TGG	-	chr1_2:75384674-75384693	None:intergenic	65.0%
	TGGGGGAGAAGGTGGCAGAC+CGG	-	chr1_2:75384678-75384697	None:intergenic	65.0%
	TGCCCTAAGCCCCGCCGTGT+CGG	+	chr1_2:75383998-75384017	Msa0092690:CDS	70.0%
	GTCCGACACGGCGGGGCTTA+GGG	-	chr1_2:75384003-75384022	None:intergenic	70.0%
	AGTCCGACACGGCGGGGCTT+AGG	-	chr1_2:75384004-75384023	None:intergenic	70.0%
	CGCCCCTCTCACCGTCGTCA+TGG	+	chr1_2:75384633-75384652	Msa0092690:CDS	70.0%
	TGCCCTAAGCCCCGCCGTGT+CGG	+	chr1_2:75383998-75384017	Msa0092690:CDS	70.0%
	GTCCGACACGGCGGGGCTTA+GGG	-	chr1_2:75384003-75384022	None:intergenic	70.0%
	AGTCCGACACGGCGGGGCTT+AGG	-	chr1_2:75384004-75384023	None:intergenic	70.0%
	CGCCCCTCTCACCGTCGTCA+TGG	+	chr1_2:75384633-75384652	Msa0092690:CDS	70.0%
	GGCGGCGACGAGGCTACTGG+AGG	-	chr1_2:75384533-75384552	None:intergenic	75.0%
	GGTGGCAGACCGGATGGGGC+AGG	-	chr1_2:75384668-75384687	None:intergenic	75.0%
	GGCGGCGACGAGGCTACTGG+AGG	-	chr1_2:75384533-75384552	None:intergenic	75.0%
	GGTGGCAGACCGGATGGGGC+AGG	-	chr1_2:75384668-75384687	None:intergenic	75.0%
!	GGGGGCGGCGACGAGGCTAC+TGG	-	chr1_2:75384536-75384555	None:intergenic	80.0%
!	GGGGGCGGCGACGAGGCTAC+TGG	-	chr1_2:75384536-75384555	None:intergenic	80.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_2	gene	75383049	75385322	75383049	ID=Msa0092690;Name=Msa0092690
chr1_2	mRNA	75383049	75385322	75383049	ID=Msa0092690-mRNA-1;Parent=Msa0092690;Name=Msa0092690-mRNA-1;_AED=0.16;_eAED=0.16;_QI=346\|1\|1\|1\|0.66\|0.5\|4\|502\|163
chr1_2	exon	75383049	75383358	75383049	ID=Msa0092690-mRNA-1:exon:26521;Parent=Msa0092690-mRNA-1
chr1_2	exon	75383938	75384077	75383938	ID=Msa0092690-mRNA-1:exon:26522;Parent=Msa0092690-mRNA-1
chr1_2	exon	75384178	75384244	75384178	ID=Msa0092690-mRNA-1:exon:26523;Parent=Msa0092690-mRNA-1
chr1_2	exon	75384500	75385322	75384500	ID=Msa0092690-mRNA-1:exon:26524;Parent=Msa0092690-mRNA-1
chr1_2	five_prime_UTR	75383049	75383358	75383049	ID=Msa0092690-mRNA-1:five_prime_utr;Parent=Msa0092690-mRNA-1
chr1_2	five_prime_UTR	75383938	75383973	75383938	ID=Msa0092690-mRNA-1:five_prime_utr;Parent=Msa0092690-mRNA-1
chr1_2	CDS	75383974	75384077	75383974	ID=Msa0092690-mRNA-1:cds;Parent=Msa0092690-mRNA-1
chr1_2	CDS	75384178	75384244	75384178	ID=Msa0092690-mRNA-1:cds;Parent=Msa0092690-mRNA-1
chr1_2	CDS	75384500	75384820	75384500	ID=Msa0092690-mRNA-1:cds;Parent=Msa0092690-mRNA-1
chr1_2	three_prime_UTR	75384821	75385322	75384821	ID=Msa0092690-mRNA-1:three_prime_utr;Parent=Msa0092690-mRNA-1

Gene Sequence

>Msa0092690

ATGAACGGAAGAGACTCCGTCGTTTGCCCTAAGCCCCGCCGTGTCGGACTCCTCAACTTCGCCGTCAACGACTACCCGAGCAGATCCTTCCGGTGGCATCTCAGTTGCCAAGTTGAACCGTGTGATTCAAACTCATCTGCGTCAAATCCCTTGGACACAATTCTCACCAAGGATGATGATTGTGATACGGAACAATCAAGTCCTCCAGTAGCCTCGTCGCCGCCCCCATTTTTCTGTGGGTCTCCGCCGAGCAGAGTAGCTAACCCACTAATTCAGGATGCTCGATTCGGGGATGAGAATTTCTCGCCCCTCTCACCGTCGTCATGGGTGGTGGTTCCTGCCCCATCCGGTCTGCCACCTTCTCCCCCATCTTCTGCAAGGAAGGGAGGATGTGTTCGGGCCAATTTTGGTAACAATCCGGCGGTGAGAGTCGAAGGATTCGATTGCCTTGACAGGGACAGCCGTAATTGCAGCATCCCTGCTCTGGCTTAG

Protein sequence

>Msa0092690

MNGRDSVVCPKPRRVGLLNFAVNDYPSRSFRWHLSCQVEPCDSNSSASNPLDTILTKDDDCDTEQSSPPVASSPPPFFCGSPPSRVANPLIQDARFGDENFSPLSPSSWVVVPAPSGLPPSPPSSARKGGCVRANFGNNPAVRVEGFDCLDRDSRNCSIPALA*