Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704510 | XP_003630057.2 | 97.628 | 506 | 12 | 0 | 1 | 506 | 1 | 506 | 0.0 | 1024 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704510 | sp|Q7Z9L3|EXGA_ASPOR | 29.032 | 341 | 181 | 9 | 208 | 500 | 61 | 388 | 6.94e-41 | 154 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704510 | G7LAD4 | 97.628 | 506 | 12 | 0 | 1 | 506 | 1 | 506 | 0.0 | 1024 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0018060 | Msa0704510 | 0.815407 | 9.391268e-52 | -8.615850e-47 |
| Msa0052380 | Msa0704510 | 0.816486 | 5.395677e-52 | -8.615850e-47 |
| Msa0097390 | Msa0704510 | 0.805290 | 1.433789e-49 | -8.615850e-47 |
| Msa0704440 | Msa0704510 | 0.949526 | 1.064514e-107 | -8.615850e-47 |
| Msa0704510 | Msa0704520 | 0.892158 | 2.053486e-74 | -8.615850e-47 |
| Msa0704510 | Msa1418990 | 0.803677 | 3.110444e-49 | -8.615850e-47 |
| Msa0333070 | Msa0704510 | 0.803495 | 3.391769e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704510 | MtrunA17_Chr8g0382641 | 97.628 | 506 | 12 | 0 | 1 | 506 | 1 | 506 | 0.0 | 1024 |
| Msa0704510 | MtrunA17_Chr3g0079451 | 66.387 | 476 | 155 | 3 | 31 | 506 | 3 | 473 | 0.0 | 677 |
| Msa0704510 | MtrunA17_Chr3g0079461 | 65.336 | 476 | 160 | 4 | 31 | 506 | 27 | 497 | 0.0 | 652 |
| Msa0704510 | MtrunA17_Chr3g0079441 | 61.055 | 493 | 185 | 5 | 14 | 506 | 6 | 491 | 0.0 | 635 |
| Msa0704510 | MtrunA17_Chr3g0079431 | 61.134 | 494 | 181 | 6 | 14 | 506 | 6 | 489 | 0.0 | 632 |
| Msa0704510 | MtrunA17_Chr5g0425361 | 54.990 | 511 | 216 | 7 | 1 | 506 | 6 | 507 | 0.0 | 582 |
| Msa0704510 | MtrunA17_Chr5g0425401 | 53.937 | 508 | 219 | 8 | 4 | 506 | 8 | 505 | 0.0 | 556 |
| Msa0704510 | MtrunA17_Chr3g0123661 | 47.390 | 479 | 240 | 7 | 33 | 506 | 34 | 505 | 6.51e-154 | 449 |
| Msa0704510 | MtrunA17_Chr5g0425351 | 42.920 | 226 | 86 | 6 | 226 | 448 | 19 | 204 | 3.27e-52 | 176 |
| Msa0704510 | MtrunA17_Chr5g0425301 | 54.545 | 77 | 34 | 1 | 378 | 453 | 1 | 77 | 4.04e-20 | 84.7 |
| Msa0704510 | MtrunA17_Chr5g0425291 | 56.140 | 57 | 24 | 1 | 222 | 278 | 17 | 72 | 5.93e-17 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 115 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCCACTGGGAAACTTTC+AGG | 0.072961 | 4_4:+76960509 | Msa0704510:CDS |
| AAACAAATTAGTGGCTAATT+TGG | 0.131032 | 4_4:+76961045 | Msa0704510:CDS |
| GACCATAACCATTTGTAATT+TGG | 0.144880 | 4_4:-76961371 | None:intergenic |
| TTCAGATACATGTCAGAAAA+TGG | 0.172150 | 4_4:+76962002 | Msa0704510:CDS |
| TTGACTGACACCATTCTAAA+AGG | 0.276822 | 4_4:+76961342 | Msa0704510:CDS |
| GCTCTTATTCGAACCTTGTT+TGG | 0.284470 | 4_4:-76961118 | None:intergenic |
| AAGCTGTGAACCTTGGAAAT+TGG | 0.296076 | 4_4:+76960192 | Msa0704510:CDS |
| CTTAATTACCCTCATGATCT+TGG | 0.300109 | 4_4:-76961406 | None:intergenic |
| AAGTATCTCTGCGCAGAAAA+TGG | 0.313062 | 4_4:+76960451 | Msa0704510:CDS |
| TACATTTGGATGGGCATATT+GGG | 0.314418 | 4_4:+76963680 | Msa0704510:CDS |
| ATGGAACCTTCTCTCTTTGA+TGG | 0.321798 | 4_4:+76960233 | Msa0704510:CDS |
| CTACATTTGGATGGGCATAT+TGG | 0.324675 | 4_4:+76963679 | Msa0704510:CDS |
| TGAGCCTCAAGGAGTTGATT+TGG | 0.327335 | 4_4:+76963014 | Msa0704510:CDS |
| TAATGTAATTGCAGTAAGTA+TGG | 0.328002 | 4_4:+76962240 | Msa0704510:intron |
| TCAAATGTTTCCTTGTTTCC+AGG | 0.331392 | 4_4:-76961073 | None:intergenic |
| GCTGCACCAGCTTCACAAAA+TGG | 0.342497 | 4_4:+76962288 | Msa0704510:CDS |
| ATGATCTTGGAAGCTTTGTC+TGG | 0.347957 | 4_4:-76961393 | None:intergenic |
| CTTGTACCTTCATAAATTGT+TGG | 0.360711 | 4_4:-76963638 | None:intergenic |
| GTGGGATTGGAAGATGAAAA+TGG | 0.361512 | 4_4:+76961019 | Msa0704510:CDS |
| AGATCTCTGACCACATCTAA+TGG | 0.388185 | 4_4:+76963276 | Msa0704510:CDS |
| GTATACTCTCGAGCTACATT+TGG | 0.394176 | 4_4:+76963666 | Msa0704510:CDS |
| CAGGGGAATGGAGCGGTGAC+TGG | 0.399248 | 4_4:+76963586 | Msa0704510:intron |
| GAGCCTCAAGGAGTTGATTT+GGG | 0.402075 | 4_4:+76963015 | Msa0704510:CDS |
| TAATAAGCAATTTGTGGGAT+TGG | 0.405438 | 4_4:+76961006 | Msa0704510:CDS |
| CCCAGTGGAAAGCTTTGGTC+CGG | 0.406453 | 4_4:-76960498 | None:intergenic |
| TTGTACCTTCATAAATTGTT+GGG | 0.410836 | 4_4:-76963637 | None:intergenic |
| ACCTGTAGAAACAGACCATT+TGG | 0.415494 | 4_4:-76961142 | None:intergenic |
| TACCAAATTACAAATGGTTA+TGG | 0.415761 | 4_4:+76961369 | Msa0704510:CDS |
| AATGGACCCCTCATCTTTGT+TGG | 0.417428 | 4_4:+76963294 | Msa0704510:CDS |
| CAAGGGATGGTTATCGAGAA+TGG | 0.431434 | 4_4:+76962328 | Msa0704510:CDS |
| ACAAATGGCTTTGGTGGTGT+TGG | 0.433057 | 4_4:-76962071 | None:intergenic |
| TTTCCACTGGGAAACTTTCA+GGG | 0.435872 | 4_4:+76960510 | Msa0704510:CDS |
| TTCAAGGATCCTCCAACAAA+TGG | 0.438681 | 4_4:-76962086 | None:intergenic |
| ACACCACCAAAGCCATTTGT+TGG | 0.439864 | 4_4:+76962074 | Msa0704510:CDS |
| CAAATGGCTTTGGTGGTGTT+GGG | 0.444244 | 4_4:-76962070 | None:intergenic |
| ACTCACTAGAGTCTCTGATA+TGG | 0.445502 | 4_4:-76961253 | None:intergenic |
| AGTTTCCCAGTGGAAAGCTT+TGG | 0.446212 | 4_4:-76960503 | None:intergenic |
| GAACTATTGTTGTTGCCAAC+CGG | 0.452412 | 4_4:+76960479 | Msa0704510:CDS |
| AAGGGATGGTTATCGAGAAT+GGG | 0.457232 | 4_4:+76962329 | Msa0704510:CDS |
| AGGGTCACTATCCTCCCAAC+TGG | 0.457954 | 4_4:-76961298 | None:intergenic |
| GTGAATTAAACCTTTGAGCT+AGG | 0.459213 | 4_4:-76962392 | None:intergenic |
| GATCCTCCAACAAATGGCTT+TGG | 0.463311 | 4_4:-76962080 | None:intergenic |
| TCAGATACATGTCAGAAAAT+GGG | 0.464228 | 4_4:+76962003 | Msa0704510:CDS |
| CCTCCAACAAATGGCTTTGG+TGG | 0.466401 | 4_4:-76962077 | None:intergenic |
| TATTGGGGATGCAGGATCAC+TGG | 0.469409 | 4_4:+76961955 | Msa0704510:intron |
| AGAGATAGAAAATGAACAAA+AGG | 0.470252 | 4_4:-76960115 | None:intergenic |
| TGTGATAATGTCTAACCCTC+TGG | 0.470292 | 4_4:+76963101 | Msa0704510:CDS |
| CAACTCAAAGCTGTGAACCT+TGG | 0.471493 | 4_4:+76960185 | Msa0704510:CDS |
| ACAAATGTGACTCTAACAAC+TGG | 0.478443 | 4_4:+76963706 | Msa0704510:CDS |
| TCAGAATTCCCGTGGGGTGG+TGG | 0.478604 | 4_4:+76962036 | Msa0704510:CDS |
| ATTGGTTGGTTACTGAAGGA+TGG | 0.479950 | 4_4:+76960210 | Msa0704510:CDS |
| TTCTTCTATTTCTGATACTG+TGG | 0.494299 | 4_4:+76962356 | Msa0704510:CDS |
| GTGTCTAATAAGCAATTTGT+GGG | 0.494697 | 4_4:+76961001 | Msa0704510:CDS |
| GATGGAATTTGGCAGGGGAA+TGG | 0.495782 | 4_4:+76963574 | Msa0704510:intron |
| GGAGAATACCAAATTACAAA+TGG | 0.503549 | 4_4:+76961363 | Msa0704510:CDS |
| TAGATGTGGTCAGAGATCTA+AGG | 0.505597 | 4_4:-76963272 | None:intergenic |
| CTAACAACTGGAGTCTTAAG+TGG | 0.511323 | 4_4:+76963718 | Msa0704510:CDS |
| ACCAAATGGTCTGTTTCTAC+AGG | 0.515158 | 4_4:+76961141 | Msa0704510:CDS |
| TTGCAGTAAGTATGGAATGA+AGG | 0.515509 | 4_4:+76962248 | Msa0704510:intron |
| ACCGGACCAAAGCTTTCCAC+TGG | 0.515668 | 4_4:+76960497 | Msa0704510:CDS |
| AAATGGAGAAAACAAATTAG+TGG | 0.517715 | 4_4:+76961036 | Msa0704510:CDS |
| AAGCAGGTTATGATGCTGTA+AGG | 0.518309 | 4_4:+76963058 | Msa0704510:CDS |
| CACTTGACAATGCCTTCACA+TGG | 0.521824 | 4_4:+76962111 | Msa0704510:CDS |
| GACTCTAGTGAGTACAGAAA+CGG | 0.525597 | 4_4:+76961263 | Msa0704510:CDS |
| CAGTAACCAACCAATTTCCA+AGG | 0.529368 | 4_4:-76960202 | None:intergenic |
| GTGAAGCTGGTGCAGCATGC+AGG | 0.530727 | 4_4:-76962281 | None:intergenic |
| AGATTCCCAACAATTTATGA+AGG | 0.534115 | 4_4:+76963632 | Msa0704510:CDS |
| GTGGCTAATTTGGATTCACC+TGG | 0.534148 | 4_4:+76961055 | Msa0704510:CDS |
| CCACCAAAGCCATTTGTTGG+AGG | 0.539349 | 4_4:+76962077 | Msa0704510:CDS |
| TTTGGATTCACCTGGAAACA+AGG | 0.546873 | 4_4:+76961063 | Msa0704510:CDS |
| GTATGGAATGAAGGTAATTG+TGG | 0.549760 | 4_4:+76962257 | Msa0704510:CDS |
| CTATAGACTTCCTAGCTCAA+AGG | 0.550341 | 4_4:+76962382 | Msa0704510:CDS |
| CTATCAAAAGCTCTAACAAA+CGG | 0.553618 | 4_4:-76963147 | None:intergenic |
| ACTCTCGAGCTACATTTGGA+TGG | 0.555900 | 4_4:+76963670 | Msa0704510:CDS |
| TTTATTCCATCAAAGAGAGA+AGG | 0.556288 | 4_4:-76960239 | None:intergenic |
| AGTGTCTAATAAGCAATTTG+TGG | 0.557110 | 4_4:+76961000 | Msa0704510:CDS |
| GGTTTATGAAGAATCCAGTT+GGG | 0.558970 | 4_4:+76961284 | Msa0704510:CDS |
| CTCTCGAGCTACATTTGGAT+GGG | 0.559815 | 4_4:+76963671 | Msa0704510:CDS |
| CGTGGGGTGGTGGATAGCTA+AGG | 0.561788 | 4_4:+76962046 | Msa0704510:CDS |
| GGAATGGAGCGGTGACTGGA+AGG | 0.564154 | 4_4:+76963590 | Msa0704510:CDS |
| ACAATTTATGAAGGTACAAG+TGG | 0.567898 | 4_4:+76963641 | Msa0704510:CDS |
| GTGGAAAGCTTTGGTCCGGT+TGG | 0.569396 | 4_4:-76960494 | None:intergenic |
| TTAGCTATCCACCACCCCAC+GGG | 0.571193 | 4_4:-76962044 | None:intergenic |
| GGAAATTGGTTGGTTACTGA+AGG | 0.581283 | 4_4:+76960206 | Msa0704510:CDS |
| AGGCTTACCAACAAAGATGA+GGG | 0.583744 | 4_4:-76963301 | None:intergenic |
| GCTCATAGTGCAACAAGGGA+TGG | 0.586890 | 4_4:+76962315 | Msa0704510:CDS |
| CTCTGCGCAGAAAATGGTGG+AGG | 0.588597 | 4_4:+76960457 | Msa0704510:CDS |
| GTTGGTTACTGAAGGATGGA+TGG | 0.590842 | 4_4:+76960214 | Msa0704510:CDS |
| CGGTTTATGAAGAATCCAGT+TGG | 0.595000 | 4_4:+76961283 | Msa0704510:CDS |
| CCTTAACTGTGCCCATGTGA+AGG | 0.595136 | 4_4:-76962123 | None:intergenic |
| GTTCGAATAAGAGCACCAAA+TGG | 0.596929 | 4_4:+76961127 | Msa0704510:CDS |
| CTTAGCTATCCACCACCCCA+CGG | 0.600853 | 4_4:-76962045 | None:intergenic |
| TGTGAACCTTGGAAATTGGT+TGG | 0.604612 | 4_4:+76960196 | Msa0704510:CDS |
| CAGTCAGAATTCCCGTGGGG+TGG | 0.607298 | 4_4:+76962033 | Msa0704510:CDS |
| ACAAAGCTTCCAAGATCATG+AGG | 0.610942 | 4_4:+76961397 | Msa0704510:CDS |
| AAATGCAGTCAGAATTCCCG+TGG | 0.611238 | 4_4:+76962028 | Msa0704510:CDS |
| CAACTCATGAATGAGCCTCA+AGG | 0.620097 | 4_4:+76963003 | Msa0704510:CDS |
| CCGGACCAAAGCTTTCCACT+GGG | 0.623637 | 4_4:+76960498 | Msa0704510:CDS |
| AAGGCTTACCAACAAAGATG+AGG | 0.625272 | 4_4:-76963302 | None:intergenic |
| GAAGAGCTCATAGTGCAACA+AGG | 0.630566 | 4_4:+76962310 | Msa0704510:CDS |
| TATCTCTGCGCAGAAAATGG+TGG | 0.631797 | 4_4:+76960454 | Msa0704510:CDS |
| CTTCCCAAATCAACTCCTTG+AGG | 0.634054 | 4_4:-76963018 | None:intergenic |
| ATTTATGAAGGTACAAGTGG+AGG | 0.636870 | 4_4:+76963644 | Msa0704510:CDS |
| TTATGAAGAATCCAGTTGGG+AGG | 0.640651 | 4_4:+76961287 | Msa0704510:CDS |
| AGGGATGGTTATCGAGAATG+GGG | 0.654790 | 4_4:+76962330 | Msa0704510:CDS |
| GATGAGGGGTCCATTAGATG+TGG | 0.658343 | 4_4:-76963286 | None:intergenic |
| AAGAGCTCATAGTGCAACAA+GGG | 0.661744 | 4_4:+76962311 | Msa0704510:CDS |
| ACTTGACAATGCCTTCACAT+GGG | 0.666696 | 4_4:+76962112 | Msa0704510:CDS |
| AATGCAGTCAGAATTCCCGT+GGG | 0.669618 | 4_4:+76962029 | Msa0704510:CDS |
| AAATGATGATGATCCAAACA+AGG | 0.674155 | 4_4:+76961105 | Msa0704510:CDS |
| GGCTTACCAACAAAGATGAG+GGG | 0.677681 | 4_4:-76963300 | None:intergenic |
| CAAAGCTTCCAAGATCATGA+GGG | 0.680521 | 4_4:+76961398 | Msa0704510:CDS |
| TGACCCTGAAAGTTTCCCAG+TGG | 0.714189 | 4_4:-76960513 | None:intergenic |
| AATTTGGCAGGGGAATGGAG+CGG | 0.739241 | 4_4:+76963579 | Msa0704510:intron |
| ATGCAGTCAGAATTCCCGTG+GGG | 0.779982 | 4_4:+76962030 | Msa0704510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAAAAATAATAATGGAA+TGG | - | chr4_4:76960350-76960369 | None:intergenic | 10.0% |
| !!! | ATTTTTGTAGAAAAAAAAAA+GGG | - | chr4_4:76962462-76962481 | None:intergenic | 10.0% |
| !!! | TATTTTTGTAGAAAAAAAAA+AGG | - | chr4_4:76962463-76962482 | None:intergenic | 10.0% |
| !!! | AATAAAAAACAATGATCTTT+TGG | + | chr4_4:76960256-76960275 | Msa0704510:CDS | 15.0% |
| !! | TATTACTAGCTAAAATAATT+TGG | + | chr4_4:76960380-76960399 | Msa0704510:intron | 15.0% |
| !!! | TAAAATAATTTGGTAATTTC+AGG | + | chr4_4:76960390-76960409 | Msa0704510:intron | 15.0% |
| !! | TTTATTAATAGTAACGATAT+TGG | - | chr4_4:76960735-76960754 | None:intergenic | 15.0% |
| !!! | TCATACTACTAATATTTTTT+TGG | - | chr4_4:76960773-76960792 | None:intergenic | 15.0% |
| !! | ATCAAAATATAATTGAAATC+TGG | - | chr4_4:76961770-76961789 | None:intergenic | 15.0% |
| !! | ATTGAAAACTAAAAAATGAA+GGG | - | chr4_4:76962432-76962451 | None:intergenic | 15.0% |
| !! | AATTGAAAACTAAAAAATGA+AGG | - | chr4_4:76962433-76962452 | None:intergenic | 15.0% |
| !! | AACAAATTAAGAATCAAAAT+TGG | - | chr4_4:76962527-76962546 | None:intergenic | 15.0% |
| !!! | ATTTTGATTCTTAATTTGTT+TGG | + | chr4_4:76962527-76962546 | Msa0704510:intron | 15.0% |
| !!! | GAGTTGCAAATTAAATTTTT+TGG | - | chr4_4:76960171-76960190 | None:intergenic | 20.0% |
| !! | CATTGATAAAAGAACAAAAT+AGG | - | chr4_4:76960323-76960342 | None:intergenic | 20.0% |
| !! | CAAAATATCATTACTCTTAT+TGG | - | chr4_4:76960543-76960562 | None:intergenic | 20.0% |
| !!! | TAATTTTTTAAACATACGAG+AGG | - | chr4_4:76960888-76960907 | None:intergenic | 20.0% |
| !! | AAACTTGTATACAAGTAATA+AGG | - | chr4_4:76961191-76961210 | None:intergenic | 20.0% |
| !!! | TTGTCGTTTATTAATTTATC+AGG | + | chr4_4:76961230-76961249 | Msa0704510:intron | 20.0% |
| !!! | CTTTTTCAAAAAAGACAATA+AGG | - | chr4_4:76961435-76961454 | None:intergenic | 20.0% |
| !! | GGTAAATAAAATAGACTAAA+AGG | - | chr4_4:76962159-76962178 | None:intergenic | 20.0% |
| !! | AAGTGAACTTTAAATTTCTA+TGG | - | chr4_4:76962180-76962199 | None:intergenic | 20.0% |
| !! | TTACTATAAGTTAAAACCAT+TGG | - | chr4_4:76962209-76962228 | None:intergenic | 20.0% |
| !! | TTGAAAACTAAAAAATGAAG+GGG | - | chr4_4:76962431-76962450 | None:intergenic | 20.0% |
| !! | ATCAAAATTGGAATAATGTA+TGG | - | chr4_4:76962515-76962534 | None:intergenic | 20.0% |
| !!! | TTTGGTTAAATTAGTCTTTT+AGG | + | chr4_4:76962545-76962564 | Msa0704510:intron | 20.0% |
| !! | TCTTATATTAGTAGATTGTT+TGG | + | chr4_4:76962595-76962614 | Msa0704510:intron | 20.0% |
| !! | GAAACTGATAATATTTCATT+AGG | + | chr4_4:76962919-76962938 | Msa0704510:intron | 20.0% |
| !! | TAATAATGTGTATGAAAAGA+AGG | - | chr4_4:76963324-76963343 | None:intergenic | 20.0% |
| ! | AGAGATAGAAAATGAACAAA+AGG | - | chr4_4:76960118-76960137 | None:intergenic | 25.0% |
| !! | ATAATTTGGTAATTTCAGGA+TGG | + | chr4_4:76960394-76960413 | Msa0704510:intron | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | - | chr4_4:76960596-76960615 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | + | chr4_4:76960595-76960614 | Msa0704510:intron | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | + | chr4_4:76960608-76960627 | Msa0704510:intron | 25.0% |
| !! | GATGATAGTCTTAAAATGAT+TGG | - | chr4_4:76960808-76960827 | None:intergenic | 25.0% |
| ! | AAATGGAGAAAACAAATTAG+TGG | + | chr4_4:76961036-76961055 | Msa0704510:CDS | 25.0% |
| ! | AAACAAATTAGTGGCTAATT+TGG | + | chr4_4:76961045-76961064 | Msa0704510:CDS | 25.0% |
| !!! | ATATAGTGCTTTTGTTTGTT+TGG | + | chr4_4:76961165-76961184 | Msa0704510:intron | 25.0% |
| ! | TACCAAATTACAAATGGTTA+TGG | + | chr4_4:76961369-76961388 | Msa0704510:CDS | 25.0% |
| !! | ACACTTAAAATCTAGAATGT+TGG | - | chr4_4:76961466-76961485 | None:intergenic | 25.0% |
| ! | TGATCTTGATAAAATTACGA+TGG | + | chr4_4:76961502-76961521 | Msa0704510:intron | 25.0% |
| ! | TTATTGATAGAGCTATCTAT+TGG | + | chr4_4:76961938-76961957 | Msa0704510:intron | 25.0% |
| ! | TATTGATAGAGCTATCTATT+GGG | + | chr4_4:76961939-76961958 | Msa0704510:intron | 25.0% |
| !! | ATAGACTAAAAGGTATAGTA+GGG | - | chr4_4:76962149-76962168 | None:intergenic | 25.0% |
| !! | AATAGACTAAAAGGTATAGT+AGG | - | chr4_4:76962150-76962169 | None:intergenic | 25.0% |
| ! | TAATGTAATTGCAGTAAGTA+TGG | + | chr4_4:76962240-76962259 | Msa0704510:intron | 25.0% |
| !! | GTATGGTTGATGTTATAAAT+AGG | - | chr4_4:76962498-76962517 | None:intergenic | 25.0% |
| !!! | CTGCTTGATAATACTTTTTA+AGG | - | chr4_4:76963044-76963063 | None:intergenic | 25.0% |
| !!! | CTTAAAAAGTATTATCAAGC+AGG | + | chr4_4:76963042-76963061 | Msa0704510:CDS | 25.0% |
| !!! | GCATTACTACAACTTATTTT+CGG | + | chr4_4:76963185-76963204 | Msa0704510:CDS | 25.0% |
| !!! | TTCTGAGACACAATTAAATT+TGG | - | chr4_4:76963454-76963473 | None:intergenic | 25.0% |
| !!! | AAATGTTTTGTGATGGAATT+TGG | + | chr4_4:76963563-76963582 | Msa0704510:intron | 25.0% |
| ! | TTGTACCTTCATAAATTGTT+GGG | - | chr4_4:76963640-76963659 | None:intergenic | 25.0% |
| TTTATTCCATCAAAGAGAGA+AGG | - | chr4_4:76960242-76960261 | None:intergenic | 30.0% | |
| TCAACAAAGTTGTCATCAAA+TGG | - | chr4_4:76960570-76960589 | None:intergenic | 30.0% | |
| AAAACAATGGAGAGAGAAAA+AGG | + | chr4_4:76960621-76960640 | Msa0704510:intron | 30.0% | |
| TGTCCAAAAGTTGTAAAAAG+TGG | + | chr4_4:76960687-76960706 | Msa0704510:intron | 30.0% | |
| !!! | CAACCACTTTTTACAACTTT+TGG | - | chr4_4:76960693-76960712 | None:intergenic | 30.0% |
| !!! | TTTTTTAAACATACGAGAGG+TGG | - | chr4_4:76960885-76960904 | None:intergenic | 30.0% |
| AGTGTCTAATAAGCAATTTG+TGG | + | chr4_4:76961000-76961019 | Msa0704510:CDS | 30.0% | |
| GTGTCTAATAAGCAATTTGT+GGG | + | chr4_4:76961001-76961020 | Msa0704510:CDS | 30.0% | |
| TAATAAGCAATTTGTGGGAT+TGG | + | chr4_4:76961006-76961025 | Msa0704510:CDS | 30.0% | |
| ! | AAATGATGATGATCCAAACA+AGG | + | chr4_4:76961105-76961124 | Msa0704510:CDS | 30.0% |
| !! | CAGTCATTTTGAAAACAGAA+GGG | - | chr4_4:76961320-76961339 | None:intergenic | 30.0% |
| !! | ACAGTCATTTTGAAAACAGA+AGG | - | chr4_4:76961321-76961340 | None:intergenic | 30.0% |
| !! | TTGGTATTCTCCTTTTAGAA+TGG | - | chr4_4:76961355-76961374 | None:intergenic | 30.0% |
| GGAGAATACCAAATTACAAA+TGG | + | chr4_4:76961363-76961382 | Msa0704510:CDS | 30.0% | |
| GACCATAACCATTTGTAATT+TGG | - | chr4_4:76961374-76961393 | None:intergenic | 30.0% | |
| ! | TGTTGTATTGATATTGAGAC+CGG | - | chr4_4:76961541-76961560 | None:intergenic | 30.0% |
| CAGTAACAATCAACCAAATT+GGG | - | chr4_4:76961593-76961612 | None:intergenic | 30.0% | |
| TCAGTAACAATCAACCAAAT+TGG | - | chr4_4:76961594-76961613 | None:intergenic | 30.0% | |
| TACACATTTATGCACACAAA+GGG | + | chr4_4:76961712-76961731 | Msa0704510:intron | 30.0% | |
| GTTAACCATTGAATCAAGAT+CGG | + | chr4_4:76961739-76961758 | Msa0704510:intron | 30.0% | |
| ATTATCCGATCTTGATTCAA+TGG | - | chr4_4:76961747-76961766 | None:intergenic | 30.0% | |
| !!! | TAAACTTTTGGCTTTGGATT+TGG | - | chr4_4:76961883-76961902 | None:intergenic | 30.0% |
| !!! | TTGATCTAAACTTTTGGCTT+TGG | - | chr4_4:76961889-76961908 | None:intergenic | 30.0% |
| !!! | GTTGAGTTGATCTAAACTTT+TGG | - | chr4_4:76961895-76961914 | None:intergenic | 30.0% |
| ATTGATAGAGCTATCTATTG+GGG | + | chr4_4:76961940-76961959 | Msa0704510:intron | 30.0% | |
| TTCAGATACATGTCAGAAAA+TGG | + | chr4_4:76962002-76962021 | Msa0704510:CDS | 30.0% | |
| TCAGATACATGTCAGAAAAT+GGG | + | chr4_4:76962003-76962022 | Msa0704510:CDS | 30.0% | |
| !! | TTCTTCTATTTCTGATACTG+TGG | + | chr4_4:76962356-76962375 | Msa0704510:CDS | 30.0% |
| GTTGATGTTATAAATAGGAG+TGG | - | chr4_4:76962493-76962512 | None:intergenic | 30.0% | |
| CTACTAATATAAGATGCATG+AGG | - | chr4_4:76962589-76962608 | None:intergenic | 30.0% | |
| !!! | TCGGTTTCGTAGTTTTTTTA+AGG | + | chr4_4:76962654-76962673 | Msa0704510:intron | 30.0% |
| ! | CTATCAAAAGCTCTAACAAA+CGG | - | chr4_4:76963150-76963169 | None:intergenic | 30.0% |
| ATTATGTCAACAGAATTCTC+AGG | + | chr4_4:76963381-76963400 | Msa0704510:intron | 30.0% | |
| ! | CCATCACAAAACATTTTGTT+AGG | - | chr4_4:76963559-76963578 | None:intergenic | 30.0% |
| ! | CCTAACAAAATGTTTTGTGA+TGG | + | chr4_4:76963556-76963575 | Msa0704510:intron | 30.0% |
| AGATTCCCAACAATTTATGA+AGG | + | chr4_4:76963632-76963651 | Msa0704510:CDS | 30.0% | |
| CTTGTACCTTCATAAATTGT+TGG | - | chr4_4:76963641-76963660 | None:intergenic | 30.0% | |
| ! | ACAATTTATGAAGGTACAAG+TGG | + | chr4_4:76963641-76963660 | Msa0704510:CDS | 30.0% |
| ! | TGTTTTGTAACAGTTGTGGA+GGG | + | chr4_4:76960952-76960971 | Msa0704510:intron | 35.0% |
| ! | TCAAATGTTTCCTTGTTTCC+AGG | - | chr4_4:76961076-76961095 | None:intergenic | 35.0% |
| GGTTTATGAAGAATCCAGTT+GGG | + | chr4_4:76961284-76961303 | Msa0704510:CDS | 35.0% | |
| TTGACTGACACCATTCTAAA+AGG | + | chr4_4:76961342-76961361 | Msa0704510:CDS | 35.0% | |
| CTTAATTACCCTCATGATCT+TGG | - | chr4_4:76961409-76961428 | None:intergenic | 35.0% | |
| CTACACATTTATGCACACAA+AGG | + | chr4_4:76961711-76961730 | Msa0704510:intron | 35.0% | |
| AAGTTCACTTTGTCTACCAA+TGG | + | chr4_4:76962190-76962209 | Msa0704510:intron | 35.0% | |
| TTGCAGTAAGTATGGAATGA+AGG | + | chr4_4:76962248-76962267 | Msa0704510:intron | 35.0% | |
| GTATGGAATGAAGGTAATTG+TGG | + | chr4_4:76962257-76962276 | Msa0704510:CDS | 35.0% | |
| GTGAATTAAACCTTTGAGCT+AGG | - | chr4_4:76962395-76962414 | None:intergenic | 35.0% | |
| !! | TTTGTTCTGAAACACAGACA+TGG | - | chr4_4:76962623-76962642 | None:intergenic | 35.0% |
| AGAACAAACATCAACAGTGT+CGG | + | chr4_4:76962635-76962654 | Msa0704510:intron | 35.0% | |
| !! | TTTTGTGATGGAATTTGGCA+GGG | + | chr4_4:76963568-76963587 | Msa0704510:intron | 35.0% |
| ! | ATTTATGAAGGTACAAGTGG+AGG | + | chr4_4:76963644-76963663 | Msa0704510:CDS | 35.0% |
| TACATTTGGATGGGCATATT+GGG | + | chr4_4:76963680-76963699 | Msa0704510:CDS | 35.0% | |
| ACAAATGTGACTCTAACAAC+TGG | + | chr4_4:76963706-76963725 | Msa0704510:CDS | 35.0% | |
| AAGCTGTGAACCTTGGAAAT+TGG | + | chr4_4:76960192-76960211 | Msa0704510:CDS | 40.0% | |
| TGTGAACCTTGGAAATTGGT+TGG | + | chr4_4:76960196-76960215 | Msa0704510:CDS | 40.0% | |
| CAGTAACCAACCAATTTCCA+AGG | - | chr4_4:76960205-76960224 | None:intergenic | 40.0% | |
| ! | GGAAATTGGTTGGTTACTGA+AGG | + | chr4_4:76960206-76960225 | Msa0704510:CDS | 40.0% |
| ! | ATTGGTTGGTTACTGAAGGA+TGG | + | chr4_4:76960210-76960229 | Msa0704510:CDS | 40.0% |
| ATGGAACCTTCTCTCTTTGA+TGG | + | chr4_4:76960233-76960252 | Msa0704510:CDS | 40.0% | |
| AAGTATCTCTGCGCAGAAAA+TGG | + | chr4_4:76960451-76960470 | Msa0704510:CDS | 40.0% | |
| ! | GAACTATTGTTGTTGCCAAC+CGG | + | chr4_4:76960479-76960498 | Msa0704510:CDS | 40.0% |
| TTTCCACTGGGAAACTTTCA+GGG | + | chr4_4:76960510-76960529 | Msa0704510:CDS | 40.0% | |
| AGAGAGAAAAAGGAAGAGAG+AGG | + | chr4_4:76960631-76960650 | Msa0704510:intron | 40.0% | |
| !! | TGGCTGTTTTGTAACAGTTG+TGG | + | chr4_4:76960948-76960967 | Msa0704510:intron | 40.0% |
| ! | CTGTTTTGTAACAGTTGTGG+AGG | + | chr4_4:76960951-76960970 | Msa0704510:intron | 40.0% |
| GTGGGATTGGAAGATGAAAA+TGG | + | chr4_4:76961019-76961038 | Msa0704510:CDS | 40.0% | |
| TTTGGATTCACCTGGAAACA+AGG | + | chr4_4:76961063-76961082 | Msa0704510:CDS | 40.0% | |
| GCTCTTATTCGAACCTTGTT+TGG | - | chr4_4:76961121-76961140 | None:intergenic | 40.0% | |
| !! | GTTCGAATAAGAGCACCAAA+TGG | + | chr4_4:76961127-76961146 | Msa0704510:CDS | 40.0% |
| !! | ACCAAATGGTCTGTTTCTAC+AGG | + | chr4_4:76961141-76961160 | Msa0704510:CDS | 40.0% |
| ACCTGTAGAAACAGACCATT+TGG | - | chr4_4:76961145-76961164 | None:intergenic | 40.0% | |
| ACTCACTAGAGTCTCTGATA+TGG | - | chr4_4:76961256-76961275 | None:intergenic | 40.0% | |
| GACTCTAGTGAGTACAGAAA+CGG | + | chr4_4:76961263-76961282 | Msa0704510:CDS | 40.0% | |
| CGGTTTATGAAGAATCCAGT+TGG | + | chr4_4:76961283-76961302 | Msa0704510:CDS | 40.0% | |
| TTATGAAGAATCCAGTTGGG+AGG | + | chr4_4:76961287-76961306 | Msa0704510:CDS | 40.0% | |
| ! | ATGATCTTGGAAGCTTTGTC+TGG | - | chr4_4:76961396-76961415 | None:intergenic | 40.0% |
| ACAAAGCTTCCAAGATCATG+AGG | + | chr4_4:76961397-76961416 | Msa0704510:CDS | 40.0% | |
| CAAAGCTTCCAAGATCATGA+GGG | + | chr4_4:76961398-76961417 | Msa0704510:CDS | 40.0% | |
| TATTGAGACCGGTAGAATCA+CGG | - | chr4_4:76961530-76961549 | None:intergenic | 40.0% | |
| CATTAGATGAGAGCGAGAAT+AGG | + | chr4_4:76961670-76961689 | Msa0704510:intron | 40.0% | |
| TCCATGCATTCAAGGAGTTA+GGG | - | chr4_4:76961848-76961867 | None:intergenic | 40.0% | |
| ATCCATGCATTCAAGGAGTT+AGG | - | chr4_4:76961849-76961868 | None:intergenic | 40.0% | |
| TTCAAGGATCCTCCAACAAA+TGG | - | chr4_4:76962089-76962108 | None:intergenic | 40.0% | |
| ! | GGCATTGTCAAGTGTTTTCA+AGG | - | chr4_4:76962105-76962124 | None:intergenic | 40.0% |
| ACTTGACAATGCCTTCACAT+GGG | + | chr4_4:76962112-76962131 | Msa0704510:CDS | 40.0% | |
| AAGAGCTCATAGTGCAACAA+GGG | + | chr4_4:76962311-76962330 | Msa0704510:CDS | 40.0% | |
| AAGGGATGGTTATCGAGAAT+GGG | + | chr4_4:76962329-76962348 | Msa0704510:CDS | 40.0% | |
| CTATAGACTTCCTAGCTCAA+AGG | + | chr4_4:76962382-76962401 | Msa0704510:CDS | 40.0% | |
| CTTAGCAGTTAGCATGTGTT+TGG | - | chr4_4:76962746-76962765 | None:intergenic | 40.0% | |
| AAGCAGGTTATGATGCTGTA+AGG | + | chr4_4:76963058-76963077 | Msa0704510:CDS | 40.0% | |
| ! | TGTGATAATGTCTAACCCTC+TGG | + | chr4_4:76963101-76963120 | Msa0704510:CDS | 40.0% |
| !! | CTTTTGAGTCTCTATCCAGA+GGG | - | chr4_4:76963119-76963138 | None:intergenic | 40.0% |
| !! | ACTTTTGAGTCTCTATCCAG+AGG | - | chr4_4:76963120-76963139 | None:intergenic | 40.0% |
| TAGATGTGGTCAGAGATCTA+AGG | - | chr4_4:76963275-76963294 | None:intergenic | 40.0% | |
| AGATCTCTGACCACATCTAA+TGG | + | chr4_4:76963276-76963295 | Msa0704510:CDS | 40.0% | |
| AGGCTTACCAACAAAGATGA+GGG | - | chr4_4:76963304-76963323 | None:intergenic | 40.0% | |
| AAGGCTTACCAACAAAGATG+AGG | - | chr4_4:76963305-76963324 | None:intergenic | 40.0% | |
| !! | GTTTTGTGATGGAATTTGGC+AGG | + | chr4_4:76963567-76963586 | Msa0704510:intron | 40.0% |
| ! | TTTGTGATGGAATTTGGCAG+GGG | + | chr4_4:76963569-76963588 | Msa0704510:intron | 40.0% |
| GTATACTCTCGAGCTACATT+TGG | + | chr4_4:76963666-76963685 | Msa0704510:CDS | 40.0% | |
| CTACATTTGGATGGGCATAT+TGG | + | chr4_4:76963679-76963698 | Msa0704510:CDS | 40.0% | |
| CTAACAACTGGAGTCTTAAG+TGG | + | chr4_4:76963718-76963737 | Msa0704510:CDS | 40.0% | |
| CAACTCAAAGCTGTGAACCT+TGG | + | chr4_4:76960185-76960204 | Msa0704510:CDS | 45.0% | |
| GTTGGTTACTGAAGGATGGA+TGG | + | chr4_4:76960214-76960233 | Msa0704510:CDS | 45.0% | |
| TATCTCTGCGCAGAAAATGG+TGG | + | chr4_4:76960454-76960473 | Msa0704510:CDS | 45.0% | |
| AGTTTCCCAGTGGAAAGCTT+TGG | - | chr4_4:76960506-76960525 | None:intergenic | 45.0% | |
| CTTTCCACTGGGAAACTTTC+AGG | + | chr4_4:76960509-76960528 | Msa0704510:CDS | 45.0% | |
| GTGGCTAATTTGGATTCACC+TGG | + | chr4_4:76961055-76961074 | Msa0704510:CDS | 45.0% | |
| TCCCTAACTCCTTGAATGCA+TGG | + | chr4_4:76961844-76961863 | Msa0704510:intron | 45.0% | |
| GTGAGCAATCCATGCATTCA+AGG | - | chr4_4:76961856-76961875 | None:intergenic | 45.0% | |
| AAATGCAGTCAGAATTCCCG+TGG | + | chr4_4:76962028-76962047 | Msa0704510:CDS | 45.0% | |
| AATGCAGTCAGAATTCCCGT+GGG | + | chr4_4:76962029-76962048 | Msa0704510:CDS | 45.0% | |
| !! | CAAATGGCTTTGGTGGTGTT+GGG | - | chr4_4:76962073-76962092 | None:intergenic | 45.0% |
| !! | ACAAATGGCTTTGGTGGTGT+TGG | - | chr4_4:76962074-76962093 | None:intergenic | 45.0% |
| ACACCACCAAAGCCATTTGT+TGG | + | chr4_4:76962074-76962093 | Msa0704510:CDS | 45.0% | |
| GATCCTCCAACAAATGGCTT+TGG | - | chr4_4:76962083-76962102 | None:intergenic | 45.0% | |
| CACTTGACAATGCCTTCACA+TGG | + | chr4_4:76962111-76962130 | Msa0704510:CDS | 45.0% | |
| ! | GCTCTTCCATTTTGTGAAGC+TGG | - | chr4_4:76962297-76962316 | None:intergenic | 45.0% |
| GAAGAGCTCATAGTGCAACA+AGG | + | chr4_4:76962310-76962329 | Msa0704510:CDS | 45.0% | |
| CAAGGGATGGTTATCGAGAA+TGG | + | chr4_4:76962328-76962347 | Msa0704510:CDS | 45.0% | |
| AGGGATGGTTATCGAGAATG+GGG | + | chr4_4:76962330-76962349 | Msa0704510:CDS | 45.0% | |
| ! | ACTTTGAAGGATCGGCTACA+TGG | - | chr4_4:76962696-76962715 | None:intergenic | 45.0% |
| CAACTCATGAATGAGCCTCA+AGG | + | chr4_4:76963003-76963022 | Msa0704510:CDS | 45.0% | |
| ! | TGAGCCTCAAGGAGTTGATT+TGG | + | chr4_4:76963014-76963033 | Msa0704510:CDS | 45.0% |
| ! | GAGCCTCAAGGAGTTGATTT+GGG | + | chr4_4:76963015-76963034 | Msa0704510:CDS | 45.0% |
| CTTCCCAAATCAACTCCTTG+AGG | - | chr4_4:76963021-76963040 | None:intergenic | 45.0% | |
| AATGGACCCCTCATCTTTGT+TGG | + | chr4_4:76963294-76963313 | Msa0704510:CDS | 45.0% | |
| GGCTTACCAACAAAGATGAG+GGG | - | chr4_4:76963303-76963322 | None:intergenic | 45.0% | |
| ACTCTCGAGCTACATTTGGA+TGG | + | chr4_4:76963670-76963689 | Msa0704510:CDS | 45.0% | |
| CTCTCGAGCTACATTTGGAT+GGG | + | chr4_4:76963671-76963690 | Msa0704510:CDS | 45.0% | |
| !! | TTCATTTATAAAAATAATAA+TGG | - | chr4_4:76960355-76960374 | None:intergenic | 5.0% |
| !!! | TAATATATTTATTTAATTTG+TGG | + | chr4_4:76960928-76960947 | Msa0704510:intron | 5.0% |
| TGACCCTGAAAGTTTCCCAG+TGG | - | chr4_4:76960516-76960535 | None:intergenic | 50.0% | |
| TATGTCCACGCGTCCCAATT+TGG | + | chr4_4:76961577-76961596 | Msa0704510:intron | 50.0% | |
| ATCAACCAAATTGGGACGCG+TGG | - | chr4_4:76961585-76961604 | None:intergenic | 50.0% | |
| GAGCTATCTATTGGGGATGC+AGG | + | chr4_4:76961947-76961966 | Msa0704510:intron | 50.0% | |
| TATTGGGGATGCAGGATCAC+TGG | + | chr4_4:76961955-76961974 | Msa0704510:intron | 50.0% | |
| ATGCAGTCAGAATTCCCGTG+GGG | + | chr4_4:76962030-76962049 | Msa0704510:CDS | 50.0% | |
| !! | CCTCCAACAAATGGCTTTGG+TGG | - | chr4_4:76962080-76962099 | None:intergenic | 50.0% |
| ! | CCACCAAAGCCATTTGTTGG+AGG | + | chr4_4:76962077-76962096 | Msa0704510:CDS | 50.0% |
| CCTTAACTGTGCCCATGTGA+AGG | - | chr4_4:76962126-76962145 | None:intergenic | 50.0% | |
| CCTTCACATGGGCACAGTTA+AGG | + | chr4_4:76962123-76962142 | Msa0704510:intron | 50.0% | |
| GCTGCACCAGCTTCACAAAA+TGG | + | chr4_4:76962288-76962307 | Msa0704510:CDS | 50.0% | |
| GCTCATAGTGCAACAAGGGA+TGG | + | chr4_4:76962315-76962334 | Msa0704510:CDS | 50.0% | |
| ! | CAGACGCGACTTTGAAGGAT+CGG | - | chr4_4:76962704-76962723 | None:intergenic | 50.0% |
| GATGAGGGGTCCATTAGATG+TGG | - | chr4_4:76963289-76963308 | None:intergenic | 50.0% | |
| GATGGAATTTGGCAGGGGAA+TGG | + | chr4_4:76963574-76963593 | Msa0704510:intron | 50.0% | |
| AATTTGGCAGGGGAATGGAG+CGG | + | chr4_4:76963579-76963598 | Msa0704510:intron | 50.0% | |
| CTCTGCGCAGAAAATGGTGG+AGG | + | chr4_4:76960457-76960476 | Msa0704510:CDS | 55.0% | |
| ! | GTGGAAAGCTTTGGTCCGGT+TGG | - | chr4_4:76960497-76960516 | None:intergenic | 55.0% |
| ACCGGACCAAAGCTTTCCAC+TGG | + | chr4_4:76960497-76960516 | Msa0704510:CDS | 55.0% | |
| ! | CCCAGTGGAAAGCTTTGGTC+CGG | - | chr4_4:76960501-76960520 | None:intergenic | 55.0% |
| CCGGACCAAAGCTTTCCACT+GGG | + | chr4_4:76960498-76960517 | Msa0704510:CDS | 55.0% | |
| AGGGTCACTATCCTCCCAAC+TGG | - | chr4_4:76961301-76961320 | None:intergenic | 55.0% | |
| CGATGGAGCCGTGATTCTAC+CGG | + | chr4_4:76961519-76961538 | Msa0704510:intron | 55.0% | |
| TTAGCTATCCACCACCCCAC+GGG | - | chr4_4:76962047-76962066 | None:intergenic | 55.0% | |
| CTTAGCTATCCACCACCCCA+CGG | - | chr4_4:76962048-76962067 | None:intergenic | 55.0% | |
| AGACGCAGACGCGACTTTGA+AGG | - | chr4_4:76962709-76962728 | None:intergenic | 55.0% | |
| CAGTCAGAATTCCCGTGGGG+TGG | + | chr4_4:76962033-76962052 | Msa0704510:CDS | 60.0% | |
| TCAGAATTCCCGTGGGGTGG+TGG | + | chr4_4:76962036-76962055 | Msa0704510:CDS | 60.0% | |
| !! | CGTGGGGTGGTGGATAGCTA+AGG | + | chr4_4:76962046-76962065 | Msa0704510:CDS | 60.0% |
| GTGAAGCTGGTGCAGCATGC+AGG | - | chr4_4:76962284-76962303 | None:intergenic | 60.0% | |
| GGAATGGAGCGGTGACTGGA+AGG | + | chr4_4:76963590-76963609 | Msa0704510:CDS | 60.0% | |
| CAGGGGAATGGAGCGGTGAC+TGG | + | chr4_4:76963586-76963605 | Msa0704510:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 76960089 | 76963770 | 76960089 | ID=Msa0704510;Name=Msa0704510 |
| chr4_4 | mRNA | 76960089 | 76963770 | 76960089 | ID=Msa0704510-mRNA-1;Parent=Msa0704510;Name=Msa0704510-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.57|0.25|1|1|1|8|0|506 |
| chr4_4 | exon | 76960089 | 76960277 | 76960089 | ID=Msa0704510-mRNA-1:exon:24226;Parent=Msa0704510-mRNA-1 |
| chr4_4 | exon | 76960412 | 76960531 | 76960412 | ID=Msa0704510-mRNA-1:exon:24227;Parent=Msa0704510-mRNA-1 |
| chr4_4 | exon | 76960965 | 76961162 | 76960965 | ID=Msa0704510-mRNA-1:exon:24228;Parent=Msa0704510-mRNA-1 |
| chr4_4 | exon | 76961252 | 76961419 | 76961252 | ID=Msa0704510-mRNA-1:exon:24229;Parent=Msa0704510-mRNA-1 |
| chr4_4 | exon | 76961969 | 76962138 | 76961969 | ID=Msa0704510-mRNA-1:exon:24230;Parent=Msa0704510-mRNA-1 |
| chr4_4 | exon | 76962254 | 76962403 | 76962254 | ID=Msa0704510-mRNA-1:exon:24231;Parent=Msa0704510-mRNA-1 |
| chr4_4 | exon | 76962972 | 76963315 | 76962972 | ID=Msa0704510-mRNA-1:exon:24232;Parent=Msa0704510-mRNA-1 |
| chr4_4 | exon | 76963589 | 76963770 | 76963589 | ID=Msa0704510-mRNA-1:exon:24233;Parent=Msa0704510-mRNA-1 |
| chr4_4 | CDS | 76960089 | 76960277 | 76960089 | ID=Msa0704510-mRNA-1:cds;Parent=Msa0704510-mRNA-1 |
| chr4_4 | CDS | 76960412 | 76960531 | 76960412 | ID=Msa0704510-mRNA-1:cds;Parent=Msa0704510-mRNA-1 |
| chr4_4 | CDS | 76960965 | 76961162 | 76960965 | ID=Msa0704510-mRNA-1:cds;Parent=Msa0704510-mRNA-1 |
| chr4_4 | CDS | 76961252 | 76961419 | 76961252 | ID=Msa0704510-mRNA-1:cds;Parent=Msa0704510-mRNA-1 |
| chr4_4 | CDS | 76961969 | 76962138 | 76961969 | ID=Msa0704510-mRNA-1:cds;Parent=Msa0704510-mRNA-1 |
| chr4_4 | CDS | 76962254 | 76962403 | 76962254 | ID=Msa0704510-mRNA-1:cds;Parent=Msa0704510-mRNA-1 |
| chr4_4 | CDS | 76962972 | 76963315 | 76962972 | ID=Msa0704510-mRNA-1:cds;Parent=Msa0704510-mRNA-1 |
| chr4_4 | CDS | 76963589 | 76963770 | 76963589 | ID=Msa0704510-mRNA-1:cds;Parent=Msa0704510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
