Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0717610 | XP_024640978.1 | 97.393 | 537 | 14 | 0 | 1 | 537 | 1 | 537 | 0.0 | 1068 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0717610 | sp|F4I9E1|NFD4_ARATH | 31.471 | 537 | 333 | 13 | 12 | 525 | 42 | 566 | 1.40e-67 | 231 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0717610 | G7JXI0 | 97.393 | 537 | 14 | 0 | 1 | 537 | 1 | 537 | 0.0 | 1068 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0059880 | Msa0717610 | 0.808415 | 3.132455e-50 | -8.615850e-47 |
| Msa0631700 | Msa0717610 | 0.819937 | 8.935710e-53 | -8.615850e-47 |
| Msa0652610 | Msa0717610 | 0.818658 | 1.747046e-52 | -8.615850e-47 |
| Msa0670360 | Msa0717610 | 0.810985 | 8.777567e-51 | -8.615850e-47 |
| Msa0717610 | Msa0772350 | 0.813769 | 2.163861e-51 | -8.615850e-47 |
| Msa0717610 | Msa0801860 | 0.969792 | 1.203619e-130 | -8.615850e-47 |
| Msa0717610 | Msa0833230 | 0.805724 | 1.162420e-49 | -8.615850e-47 |
| Msa0717610 | Msa0863840 | 0.802750 | 4.838415e-49 | -8.615850e-47 |
| Msa0717610 | Msa0945320 | 0.816660 | 4.932454e-52 | -8.615850e-47 |
| Msa0717610 | Msa1123000 | 0.811831 | 5.751252e-51 | -8.615850e-47 |
| Msa0717610 | Msa1355340 | 0.815505 | 8.933486e-52 | -8.615850e-47 |
| Msa0150910 | Msa0717610 | 0.802467 | 5.532781e-49 | -8.615850e-47 |
| Msa0464310 | Msa0717610 | 0.802399 | 5.713500e-49 | -8.615850e-47 |
| Msa0535570 | Msa0717610 | 0.821781 | 3.363726e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0717610 | MtrunA17_Chr5g0405621 | 97.393 | 537 | 14 | 0 | 1 | 537 | 1 | 537 | 0.0 | 1068 |
| Msa0717610 | MtrunA17_Chr4g0037301 | 63.498 | 526 | 182 | 4 | 11 | 526 | 13 | 538 | 0.0 | 671 |
| Msa0717610 | MtrunA17_Chr2g0304561 | 36.563 | 547 | 309 | 6 | 14 | 525 | 13 | 556 | 5.80e-111 | 342 |
| Msa0717610 | MtrunA17_Chr4g0064981 | 34.539 | 553 | 319 | 7 | 14 | 525 | 12 | 562 | 5.69e-107 | 331 |
| Msa0717610 | MtrunA17_Chr7g0225191 | 33.741 | 572 | 316 | 6 | 12 | 525 | 14 | 580 | 1.83e-105 | 328 |
| Msa0717610 | MtrunA17_Chr3g0132161 | 34.705 | 559 | 315 | 12 | 7 | 525 | 9 | 557 | 2.21e-101 | 317 |
| Msa0717610 | MtrunA17_Chr5g0442481 | 34.717 | 530 | 324 | 8 | 12 | 528 | 10 | 530 | 8.12e-97 | 304 |
| Msa0717610 | MtrunA17_Chr2g0330551 | 32.486 | 551 | 325 | 11 | 8 | 528 | 2 | 535 | 3.43e-91 | 289 |
| Msa0717610 | MtrunA17_Chr1g0210291 | 33.393 | 557 | 325 | 11 | 13 | 536 | 25 | 568 | 1.02e-87 | 282 |
| Msa0717610 | MtrunA17_Chr1g0210274 | 32.965 | 543 | 330 | 8 | 8 | 522 | 21 | 557 | 2.35e-87 | 281 |
| Msa0717610 | MtrunA17_Chr1g0210284 | 32.413 | 543 | 333 | 9 | 8 | 522 | 21 | 557 | 2.60e-87 | 281 |
| Msa0717610 | MtrunA17_Chr1g0174101 | 30.824 | 558 | 343 | 9 | 13 | 535 | 24 | 573 | 1.24e-86 | 279 |
| Msa0717610 | MtrunA17_Chr7g0264861 | 31.365 | 542 | 339 | 7 | 13 | 522 | 29 | 569 | 9.30e-84 | 272 |
| Msa0717610 | MtrunA17_Chr1g0171591 | 30.642 | 545 | 339 | 7 | 13 | 522 | 24 | 564 | 4.63e-83 | 270 |
| Msa0717610 | MtrunA17_Chr7g0251871 | 31.866 | 568 | 336 | 17 | 11 | 536 | 5 | 563 | 3.92e-76 | 251 |
| Msa0717610 | MtrunA17_Chr5g0408921 | 31.802 | 566 | 333 | 14 | 11 | 528 | 5 | 565 | 7.95e-75 | 247 |
| Msa0717610 | MtrunA17_Chr8g0369621 | 30.944 | 572 | 342 | 13 | 11 | 535 | 46 | 611 | 9.27e-74 | 246 |
| Msa0717610 | MtrunA17_Chr3g0106801 | 30.989 | 526 | 334 | 11 | 13 | 525 | 7 | 516 | 3.03e-64 | 218 |
| Msa0717610 | MtrunA17_Chr3g0106821 | 31.383 | 376 | 246 | 6 | 13 | 382 | 7 | 376 | 2.65e-51 | 179 |
| Msa0717610 | MtrunA17_Chr2g0333371 | 28.963 | 328 | 172 | 8 | 236 | 537 | 12 | 304 | 1.48e-39 | 146 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0717610 | AT4G34950.1 | 62.295 | 549 | 181 | 4 | 11 | 533 | 14 | 562 | 0.0 | 705 |
| Msa0717610 | AT2G16660.1 | 64.436 | 523 | 179 | 2 | 10 | 525 | 11 | 533 | 0.0 | 684 |
| Msa0717610 | AT2G16660.2 | 62.368 | 380 | 136 | 2 | 10 | 382 | 11 | 390 | 2.88e-163 | 469 |
| Msa0717610 | AT1G80530.1 | 35.145 | 552 | 326 | 9 | 1 | 525 | 1 | 547 | 9.35e-110 | 338 |
| Msa0717610 | AT5G14120.1 | 36.861 | 567 | 306 | 6 | 8 | 525 | 11 | 574 | 6.84e-109 | 337 |
| Msa0717610 | AT3G01930.2 | 35.813 | 578 | 304 | 7 | 7 | 525 | 10 | 579 | 6.93e-108 | 334 |
| Msa0717610 | AT5G50630.1 | 35.526 | 532 | 318 | 9 | 12 | 528 | 15 | 536 | 5.57e-106 | 328 |
| Msa0717610 | AT5G50520.1 | 35.526 | 532 | 318 | 9 | 12 | 528 | 15 | 536 | 5.57e-106 | 328 |
| Msa0717610 | AT2G28120.1 | 35.135 | 555 | 322 | 9 | 8 | 533 | 12 | 557 | 1.74e-102 | 320 |
| Msa0717610 | AT2G39210.1 | 34.973 | 549 | 318 | 11 | 13 | 529 | 21 | 562 | 4.43e-99 | 312 |
| Msa0717610 | AT1G74780.1 | 32.963 | 540 | 321 | 9 | 13 | 528 | 7 | 529 | 1.77e-90 | 288 |
| Msa0717610 | AT2G34350.1 | 32.721 | 544 | 324 | 7 | 8 | 530 | 2 | 524 | 2.03e-87 | 279 |
| Msa0717610 | AT2G34350.2 | 32.721 | 544 | 324 | 7 | 8 | 530 | 2 | 524 | 2.03e-87 | 279 |
| Msa0717610 | AT1G18940.1 | 31.569 | 548 | 314 | 10 | 13 | 529 | 9 | 526 | 2.05e-86 | 277 |
| Msa0717610 | AT2G34355.1 | 31.707 | 533 | 332 | 7 | 13 | 530 | 7 | 522 | 5.39e-82 | 265 |
| Msa0717610 | AT3G01930.1 | 35.021 | 474 | 241 | 7 | 111 | 525 | 1 | 466 | 6.57e-78 | 253 |
| Msa0717610 | AT3G01630.1 | 30.147 | 544 | 338 | 12 | 12 | 528 | 22 | 550 | 7.00e-74 | 244 |
| Msa0717610 | AT3G01630.2 | 30.147 | 544 | 338 | 12 | 12 | 528 | 40 | 568 | 1.27e-73 | 244 |
| Msa0717610 | AT1G31470.1 | 31.471 | 537 | 333 | 13 | 12 | 525 | 42 | 566 | 1.42e-68 | 231 |
| Msa0717610 | AT4G19450.1 | 31.272 | 566 | 335 | 16 | 11 | 528 | 5 | 564 | 2.03e-68 | 231 |
| Msa0717610 | AT3G01930.3 | 33.641 | 434 | 228 | 6 | 7 | 388 | 10 | 435 | 2.78e-68 | 226 |
| Msa0717610 | AT5G45275.1 | 30.688 | 567 | 335 | 15 | 11 | 528 | 5 | 562 | 2.15e-66 | 225 |
| Msa0717610 | AT2G30300.1 | 30.561 | 517 | 326 | 9 | 14 | 523 | 8 | 498 | 4.83e-65 | 220 |
| Msa0717610 | AT4G19450.2 | 31.566 | 415 | 235 | 13 | 11 | 382 | 5 | 413 | 9.51e-55 | 190 |
| Msa0717610 | AT2G34355.2 | 29.639 | 388 | 249 | 6 | 150 | 530 | 2 | 372 | 2.68e-48 | 172 |
Find 107 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTTGGACGCATTCTTTC+TGG | 0.067041 | 5_1:-11483328 | Msa0717610:CDS |
| TCATTTCATTCATAAGTATT+TGG | 0.123881 | 5_1:-11483354 | Msa0717610:CDS |
| ACTTCTTGTTCCTTTATATT+TGG | 0.160234 | 5_1:-11483665 | Msa0717610:CDS |
| CATGCTTGTGTATGTGATTA+TGG | 0.186967 | 5_1:-11482238 | Msa0717610:CDS |
| GAATAGCCCCTCTTCCTTAT+TGG | 0.195967 | 5_1:-11484873 | Msa0717610:CDS |
| CATTTCATTCATAAGTATTT+GGG | 0.219467 | 5_1:-11483353 | Msa0717610:CDS |
| CCCTTTAGAATGCCGGAAAT+TGG | 0.239061 | 5_1:+11484000 | None:intergenic |
| ATGGCTTTCGCTTGTGTATT+GGG | 0.254616 | 5_1:-11482219 | Msa0717610:CDS |
| ATAAGTATTTGGGGTTTCTT+TGG | 0.277285 | 5_1:-11483343 | Msa0717610:CDS |
| AAAGATGTTGGTAAAGCTTT+TGG | 0.279837 | 5_1:-11485006 | Msa0717610:CDS |
| TCTCAGATTCTGATGTTCTT+TGG | 0.295006 | 5_1:-11482531 | Msa0717610:CDS |
| CTCATTCTTAACCTTCCTAT+TGG | 0.296648 | 5_1:-11482360 | Msa0717610:CDS |
| CTATTTGGTCTCAAATACTA+TGG | 0.305461 | 5_1:-11482399 | Msa0717610:CDS |
| GTTATGTTTACCAGCCAATA+AGG | 0.305623 | 5_1:+11484859 | None:intergenic |
| CAGGCATGCCAAGGTTAGTT+TGG | 0.310026 | 5_1:-11482563 | Msa0717610:CDS |
| ATTAAACGAAAACCAGTTAT+AGG | 0.318415 | 5_1:-11483526 | Msa0717610:CDS |
| CTCTTGGCATTTGATATCTC+TGG | 0.323684 | 5_1:-11483751 | Msa0717610:CDS |
| GCAGCAGCTTCAGAACTATT+TGG | 0.325560 | 5_1:-11482414 | Msa0717610:CDS |
| ATCATGGGATTCATTGGTTA+TGG | 0.327847 | 5_1:-11484922 | Msa0717610:CDS |
| TTACCAGGATCACTATATAT+TGG | 0.329554 | 5_1:-11482486 | Msa0717610:CDS |
| GTATGCTCTTCTCCTATAAC+TGG | 0.339891 | 5_1:+11483514 | None:intergenic |
| TATGGCTTTCGCTTGTGTAT+TGG | 0.340093 | 5_1:-11482220 | Msa0717610:CDS |
| AAGGAAGAGGGGCTATTCTT+TGG | 0.346608 | 5_1:+11484878 | None:intergenic |
| TTTCTCTGTGGTGTTGGAAC+AGG | 0.349477 | 5_1:-11483442 | Msa0717610:CDS |
| ATTTCTGTGTATATGTATCT+TGG | 0.356332 | 5_1:+11482149 | None:intergenic |
| CAAGAAGTGGCATAGCTAAT+AGG | 0.363471 | 5_1:+11483680 | None:intergenic |
| ACTTCAGTTATTCTGATGAT+TGG | 0.363972 | 5_1:-11484949 | Msa0717610:CDS |
| TATATTGGTTCAATCTTAGT+AGG | 0.367284 | 5_1:-11482471 | Msa0717610:CDS |
| GATGTGTATATTCTTGTGTA+TGG | 0.373027 | 5_1:-11484097 | Msa0717610:CDS |
| TCATAAACATGTTATTTCAT+TGG | 0.374079 | 5_1:-11483725 | Msa0717610:CDS |
| TTGAATACGACCAAATATAA+AGG | 0.374709 | 5_1:+11483655 | None:intergenic |
| TCCAATTTCCGGCATTCTAA+AGG | 0.384971 | 5_1:-11484001 | Msa0717610:CDS |
| TGAACCTTTGTTGGCACAAA+AGG | 0.386700 | 5_1:-11483596 | Msa0717610:CDS |
| GGTGCTATCATGGGATTCAT+TGG | 0.388521 | 5_1:-11484928 | Msa0717610:CDS |
| GACAGTAGCTATTTATCTCT+TGG | 0.396797 | 5_1:-11483767 | Msa0717610:CDS |
| TTGTTCTAAATGCAAGAAAC+AGG | 0.408668 | 5_1:+11482184 | None:intergenic |
| ATCTTAGTAGGAATATGTTA+TGG | 0.410113 | 5_1:-11482459 | Msa0717610:CDS |
| ACATATTGCTTGTACCCATA+TGG | 0.411307 | 5_1:+11485119 | None:intergenic |
| AGCATTAATAGAAACTTAGA+TGG | 0.417468 | 5_1:+11483916 | None:intergenic |
| CCAATTTCCGGCATTCTAAA+GGG | 0.419855 | 5_1:-11484000 | Msa0717610:CDS |
| TTCAATATCATAAAGGTATC+CGG | 0.421548 | 5_1:+11482311 | None:intergenic |
| GTGTCATTTCTCTGTGGTGT+TGG | 0.422085 | 5_1:-11483448 | Msa0717610:CDS |
| ACAGGTTCATGAACCTTTGT+TGG | 0.424667 | 5_1:-11483605 | Msa0717610:CDS |
| GATGAATAACTTGGGACAAA+TGG | 0.427374 | 5_1:-11483410 | Msa0717610:CDS |
| AGATGTGTTAAAGTCTCTAA+TGG | 0.430909 | 5_1:-11485067 | Msa0717610:CDS |
| TCTGATGATTGGTGCTATCA+TGG | 0.440148 | 5_1:-11484938 | Msa0717610:CDS |
| GTGCAAGTGTTTCCGCCTCC+TGG | 0.444901 | 5_1:+11482276 | None:intergenic |
| TAGGATTTGTGACAGCCATA+TGG | 0.447435 | 5_1:-11485134 | Msa0717610:CDS |
| CAGGTCTTGTTTCTGATCGT+TGG | 0.448059 | 5_1:-11484975 | Msa0717610:CDS |
| GAAAAGATGAATGAACCAAT+AGG | 0.463266 | 5_1:+11482345 | None:intergenic |
| ATGAATAACTTGGGACAAAT+GGG | 0.466370 | 5_1:-11483409 | Msa0717610:CDS |
| TTCGCTTGTGTATTGGGGTG+TGG | 0.467433 | 5_1:-11482213 | Msa0717610:CDS |
| AGAGCATACTATCATTGAAA+TGG | 0.467872 | 5_1:-11483500 | Msa0717610:CDS |
| AGCCCCTCTTCCTTATTGGC+TGG | 0.481952 | 5_1:-11484869 | Msa0717610:intron |
| ACAAAAGGTTTCAGAAGTAA+AGG | 0.484351 | 5_1:-11483581 | Msa0717610:CDS |
| TAGTGGCTTCAATATCATAA+AGG | 0.484536 | 5_1:+11482304 | None:intergenic |
| TGGTTACATTGCATTGGCAA+TGG | 0.486214 | 5_1:-11482511 | Msa0717610:CDS |
| CACTCTCTGAATACTACATC+AGG | 0.489900 | 5_1:-11483303 | Msa0717610:intron |
| GCATTGGCAATGGCCTTACC+AGG | 0.490266 | 5_1:-11482501 | Msa0717610:CDS |
| GAACCAATATATAGTGATCC+TGG | 0.491333 | 5_1:+11482483 | None:intergenic |
| AATGAAATAACATGTTTATG+AGG | 0.496120 | 5_1:+11483727 | None:intergenic |
| ATCATCAGAATAACTGAAGT+TGG | 0.498832 | 5_1:+11484952 | None:intergenic |
| GGAGGCGGAAACACTTGCAC+TGG | 0.501570 | 5_1:-11482273 | Msa0717610:CDS |
| AATCTCAACTTCCTCTACCT+TGG | 0.507298 | 5_1:+11483546 | None:intergenic |
| TACATAGCCCTTTAGAATGC+CGG | 0.507305 | 5_1:+11483993 | None:intergenic |
| TCTTCTGTAGAAGTTGAAGC+TGG | 0.513323 | 5_1:+11483835 | None:intergenic |
| AGGATTTGTGACAGCCATAT+GGG | 0.515315 | 5_1:-11485133 | Msa0717610:CDS |
| GGACAAATGGGACAGGCACT+TGG | 0.515436 | 5_1:-11483397 | Msa0717610:CDS |
| TTGTGTATTGGGGTGTGGAT+TGG | 0.519733 | 5_1:-11482208 | Msa0717610:CDS |
| CTCTCTGTTGCTAAAGATGT+TGG | 0.521493 | 5_1:-11485018 | Msa0717610:CDS |
| GTTCTTTGGTTACATTGCAT+TGG | 0.523788 | 5_1:-11482517 | Msa0717610:CDS |
| TCATTGGTTATGGAGCTCAA+TGG | 0.539555 | 5_1:-11484912 | Msa0717610:CDS |
| AGAGATCTGTACCAAGGTAG+AGG | 0.540372 | 5_1:-11483557 | Msa0717610:CDS |
| AATATATAGTGATCCTGGTA+AGG | 0.541574 | 5_1:+11482488 | None:intergenic |
| ATGTGTATATTCTTGTGTAT+GGG | 0.545839 | 5_1:-11484096 | Msa0717610:CDS |
| CTGATGATTGGTGCTATCAT+GGG | 0.547328 | 5_1:-11484937 | Msa0717610:CDS |
| AATAGTTCTGAAGCTGCTGC+TGG | 0.557803 | 5_1:+11482417 | None:intergenic |
| AAATGAACAAAGAAACATCA+TGG | 0.557965 | 5_1:+11483371 | None:intergenic |
| GCAATGAGACAAATGATAGC+AGG | 0.561934 | 5_1:+11483883 | None:intergenic |
| CAATAGGAAGGTTAAGAATG+AGG | 0.565069 | 5_1:+11482361 | None:intergenic |
| ATTGAAGCCACTAGTGTACC+AGG | 0.566378 | 5_1:-11482294 | Msa0717610:CDS |
| TCTGTAGAAGTTGAAGCTGG+TGG | 0.571451 | 5_1:+11483838 | None:intergenic |
| GCCACTAGTGTACCAGGAGG+CGG | 0.573885 | 5_1:-11482288 | Msa0717610:CDS |
| TTTACCAGCCAATAAGGAAG+AGG | 0.577066 | 5_1:+11484865 | None:intergenic |
| GGCATTCTAAAGGGCTATGT+AGG | 0.579833 | 5_1:-11483991 | Msa0717610:CDS |
| AAGCTGGTGGAGTTTCATGA+AGG | 0.580336 | 5_1:+11483851 | None:intergenic |
| TCCGCCTCCTGGTACACTAG+TGG | 0.580549 | 5_1:+11482287 | None:intergenic |
| ATTTCATTCATAAGTATTTG+GGG | 0.583874 | 5_1:-11483352 | Msa0717610:CDS |
| AAATATAAAGGAACAAGAAG+TGG | 0.584319 | 5_1:+11483667 | None:intergenic |
| ATATGGGTACAAGCAATATG+TGG | 0.584975 | 5_1:-11485117 | Msa0717610:CDS |
| GCTGCGTTCCAAACTAACCT+TGG | 0.585421 | 5_1:+11482555 | None:intergenic |
| TGGCTTTCGCTTGTGTATTG+GGG | 0.591806 | 5_1:-11482218 | Msa0717610:CDS |
| TGTATATTCTTGTGTATGGG+TGG | 0.598397 | 5_1:-11484093 | Msa0717610:CDS |
| TAACTTGGGACAAATGGGAC+AGG | 0.599118 | 5_1:-11483404 | Msa0717610:CDS |
| TTACCAGCCAATAAGGAAGA+GGG | 0.606426 | 5_1:+11484866 | None:intergenic |
| TAGAAACTTAGATGGGTCTG+AGG | 0.614102 | 5_1:+11483924 | None:intergenic |
| GCAGAAAATCAGGCATGCCA+AGG | 0.615589 | 5_1:-11482572 | Msa0717610:intron |
| AGATGAATGAACCAATAGGA+AGG | 0.629288 | 5_1:+11482349 | None:intergenic |
| TTGTTTGTGTCATTTCTCTG+TGG | 0.636758 | 5_1:-11483454 | Msa0717610:CDS |
| AAAGGAAGAGATCTGTACCA+AGG | 0.647216 | 5_1:-11483563 | Msa0717610:CDS |
| GCATTAATAGAAACTTAGAT+GGG | 0.651110 | 5_1:+11483917 | None:intergenic |
| ACTATGTGTGATGAATAACT+TGG | 0.651334 | 5_1:-11483419 | Msa0717610:CDS |
| TACCAGCCAATAAGGAAGAG+GGG | 0.660022 | 5_1:+11484867 | None:intergenic |
| CTATGTGTGATGAATAACTT+GGG | 0.685471 | 5_1:-11483418 | Msa0717610:CDS |
| TGGGTGGAAACAGCACAACA+TGG | 0.685598 | 5_1:-11484077 | Msa0717610:CDS |
| GAATGCCGGAAATTGGACCG+CGG | 0.763852 | 5_1:+11484007 | None:intergenic |
| GAAGCCACTAGTGTACCAGG+AGG | 0.777264 | 5_1:-11482291 | Msa0717610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATATAAACATAGTTTTA+AGG | - | chr5_1:11484076-11484095 | Msa0717610:CDS | 10.0% |
| !!! | TAAATTGTTTTTTTGAAAAC+TGG | - | chr5_1:11482584-11482603 | Msa0717610:intron | 15.0% |
| !! | TATAGAAATATCTATATACT+AGG | - | chr5_1:11483104-11483123 | Msa0717610:intron | 15.0% |
| !!! | ATAATCAAGATTTTAAAATG+TGG | + | chr5_1:11484620-11484639 | None:intergenic | 15.0% |
| !! | TTGATTATAAGTTTATAACT+AGG | - | chr5_1:11484632-11484651 | Msa0717610:intron | 15.0% |
| !! | CATATAAAATTAAACATTCA+AGG | + | chr5_1:11484707-11484726 | None:intergenic | 15.0% |
| !!! | CTTGAATGTTTAATTTTATA+TGG | - | chr5_1:11484705-11484724 | Msa0717610:intron | 15.0% |
| !! | TAGTTTCTTTACTTTATCTT+TGG | + | chr5_1:11482728-11482747 | None:intergenic | 20.0% |
| !! | ACCAATTTATTTGATTACTT+CGG | - | chr5_1:11483167-11483186 | Msa0717610:intron | 20.0% |
| !! | AATGAAATAACATGTTTATG+AGG | + | chr5_1:11483575-11483594 | None:intergenic | 20.0% |
| !!! | TCATAAACATGTTATTTCAT+TGG | - | chr5_1:11483574-11483593 | Msa0717610:CDS | 20.0% |
| !! | TCATTTCATTCATAAGTATT+TGG | - | chr5_1:11483945-11483964 | Msa0717610:CDS | 20.0% |
| !! | CATTTCATTCATAAGTATTT+GGG | - | chr5_1:11483946-11483965 | Msa0717610:CDS | 20.0% |
| !! | ATTTCATTCATAAGTATTTG+GGG | - | chr5_1:11483947-11483966 | Msa0717610:CDS | 20.0% |
| !! | AATCAAATAGTCATGTATAT+GGG | + | chr5_1:11484054-11484073 | None:intergenic | 20.0% |
| !! | AAATCAAATAGTCATGTATA+TGG | + | chr5_1:11484055-11484074 | None:intergenic | 20.0% |
| !!! | TAAACATAGTTTTAAGGAAA+AGG | - | chr5_1:11484082-11484101 | Msa0717610:CDS | 20.0% |
| !! | ATTGATTATTTGCAATGTAA+AGG | - | chr5_1:11484183-11484202 | Msa0717610:intron | 20.0% |
| !! | GCTGTTATTAACATATAATT+AGG | - | chr5_1:11484400-11484419 | Msa0717610:intron | 20.0% |
| !!! | TTTTTCTTCTTCTTTCTATT+TGG | - | chr5_1:11484555-11484574 | Msa0717610:intron | 20.0% |
| !!! | ATTTGGTTAAGTTCTATTTT+TGG | - | chr5_1:11484572-11484591 | Msa0717610:intron | 20.0% |
| !! | TTATAAGTTTATAACTAGGA+AGG | - | chr5_1:11484636-11484655 | Msa0717610:intron | 20.0% |
| !! | TATAAGTTTATAACTAGGAA+GGG | - | chr5_1:11484637-11484656 | Msa0717610:intron | 20.0% |
| !! | ATAATTTTGCAGCTGAAAAA+TGG | - | chr5_1:11482141-11482160 | Msa0717610:CDS | 25.0% |
| !! | AAAGCTTTTGGTATTTTATC+AGG | - | chr5_1:11482305-11482324 | Msa0717610:CDS | 25.0% |
| ! | AATGAACTGAAAACAGATTA+TGG | + | chr5_1:11482961-11482980 | None:intergenic | 25.0% |
| ! | AAATATCTATATACTAGGAC+TGG | - | chr5_1:11483109-11483128 | Msa0717610:intron | 25.0% |
| ! | TCCGAAGTAATCAAATAAAT+TGG | + | chr5_1:11483171-11483190 | None:intergenic | 25.0% |
| ! | ATGTGTATATTCTTGTGTAT+GGG | - | chr5_1:11483203-11483222 | Msa0717610:intron | 25.0% |
| ! | GCATTAATAGAAACTTAGAT+GGG | + | chr5_1:11483385-11483404 | None:intergenic | 25.0% |
| ! | AGCATTAATAGAAACTTAGA+TGG | + | chr5_1:11483386-11483405 | None:intergenic | 25.0% |
| ! | AAATATAAAGGAACAAGAAG+TGG | + | chr5_1:11483635-11483654 | None:intergenic | 25.0% |
| ! | ACTTCTTGTTCCTTTATATT+TGG | - | chr5_1:11483634-11483653 | Msa0717610:CDS | 25.0% |
| ! | TTGAATACGACCAAATATAA+AGG | + | chr5_1:11483647-11483666 | None:intergenic | 25.0% |
| ! | ATTAAACGAAAACCAGTTAT+AGG | - | chr5_1:11483773-11483792 | Msa0717610:CDS | 25.0% |
| ! | AAATGAACAAAGAAACATCA+TGG | + | chr5_1:11483931-11483950 | None:intergenic | 25.0% |
| ! | AAATCTTAACTCATAGATCA+GGG | + | chr5_1:11484116-11484135 | None:intergenic | 25.0% |
| ! | AAAATCTTAACTCATAGATC+AGG | + | chr5_1:11484117-11484136 | None:intergenic | 25.0% |
| !!! | TTGGTTTTTTTAATAGTCCT+AGG | - | chr5_1:11484591-11484610 | Msa0717610:intron | 25.0% |
| !! | ATTTTATATGGCAGAAAATC+AGG | - | chr5_1:11484717-11484736 | Msa0717610:intron | 25.0% |
| !!! | TATATTGGTTCAATCTTAGT+AGG | - | chr5_1:11484828-11484847 | Msa0717610:intron | 25.0% |
| ! | ATCTTAGTAGGAATATGTTA+TGG | - | chr5_1:11484840-11484859 | Msa0717610:intron | 25.0% |
| !!! | TTCAATATCATAAAGGTATC+CGG | + | chr5_1:11484991-11485010 | None:intergenic | 25.0% |
| ! | ATTTCTGTGTATATGTATCT+TGG | + | chr5_1:11485153-11485172 | None:intergenic | 25.0% |
| AGATGTGTTAAAGTCTCTAA+TGG | - | chr5_1:11482232-11482251 | Msa0717610:CDS | 30.0% | |
| !! | AAAGATGTTGGTAAAGCTTT+TGG | - | chr5_1:11482293-11482312 | Msa0717610:CDS | 30.0% |
| ATCATCAGAATAACTGAAGT+TGG | + | chr5_1:11482350-11482369 | None:intergenic | 30.0% | |
| ACTTCAGTTATTCTGATGAT+TGG | - | chr5_1:11482350-11482369 | Msa0717610:CDS | 30.0% | |
| ! | TACACAACATGATTTGTGAA+TGG | + | chr5_1:11482560-11482579 | None:intergenic | 30.0% |
| !! | AACTACACATAGTTGACTTT+TGG | + | chr5_1:11482794-11482813 | None:intergenic | 30.0% |
| !!! | AGTTCTTTTTTGTAACTCTC+CGG | - | chr5_1:11482810-11482829 | Msa0717610:intron | 30.0% |
| AACAGACCTACAAATTATCA+GGG | + | chr5_1:11482853-11482872 | None:intergenic | 30.0% | |
| AAACAGACCTACAAATTATC+AGG | + | chr5_1:11482854-11482873 | None:intergenic | 30.0% | |
| ! | TGATAATTTGTAGGTCTGTT+TGG | - | chr5_1:11482853-11482872 | Msa0717610:intron | 30.0% |
| !! | GTTGTTTTCTTAAGCTATCT+TGG | + | chr5_1:11482996-11483015 | None:intergenic | 30.0% |
| GTTGGATGAATACAACATTT+CGG | - | chr5_1:11483134-11483153 | Msa0717610:intron | 30.0% | |
| TTGGATGAATACAACATTTC+GGG | - | chr5_1:11483135-11483154 | Msa0717610:intron | 30.0% | |
| GATGTGTATATTCTTGTGTA+TGG | - | chr5_1:11483202-11483221 | Msa0717610:intron | 30.0% | |
| !!! | ATTTCATTGGTTTTCACAGT+AGG | - | chr5_1:11483587-11483606 | Msa0717610:CDS | 30.0% |
| ! | TGTTTTTCTTTGTCAACACT+AGG | + | chr5_1:11483677-11483696 | None:intergenic | 30.0% |
| !! | TAGTGTTGACAAAGAAAAAC+AGG | - | chr5_1:11483676-11483695 | Msa0717610:CDS | 30.0% |
| ACAAAAGGTTTCAGAAGTAA+AGG | - | chr5_1:11483718-11483737 | Msa0717610:CDS | 30.0% | |
| AGAGCATACTATCATTGAAA+TGG | - | chr5_1:11483799-11483818 | Msa0717610:CDS | 30.0% | |
| !!! | TGGTGAAAACTGTTGATTTT+TGG | - | chr5_1:11483819-11483838 | Msa0717610:CDS | 30.0% |
| !!! | GGTGAAAACTGTTGATTTTT+GGG | - | chr5_1:11483820-11483839 | Msa0717610:CDS | 30.0% |
| ACTATGTGTGATGAATAACT+TGG | - | chr5_1:11483880-11483899 | Msa0717610:CDS | 30.0% | |
| CTATGTGTGATGAATAACTT+GGG | - | chr5_1:11483881-11483900 | Msa0717610:CDS | 30.0% | |
| ATGAATAACTTGGGACAAAT+GGG | - | chr5_1:11483890-11483909 | Msa0717610:CDS | 30.0% | |
| ! | ATAAGTATTTGGGGTTTCTT+TGG | - | chr5_1:11483956-11483975 | Msa0717610:CDS | 30.0% |
| CAAAACCTTTAACACAAGTT+AGG | + | chr5_1:11484295-11484314 | None:intergenic | 30.0% | |
| TTAGTTCGATTCAGAACTAT+AGG | + | chr5_1:11484327-11484346 | None:intergenic | 30.0% | |
| AAAGAACCAAAAAACCAAAC+CGG | - | chr5_1:11484459-11484478 | Msa0717610:intron | 30.0% | |
| AATATATAGTGATCCTGGTA+AGG | + | chr5_1:11484814-11484833 | None:intergenic | 30.0% | |
| TTACCAGGATCACTATATAT+TGG | - | chr5_1:11484813-11484832 | Msa0717610:intron | 30.0% | |
| CTATTTGGTCTCAAATACTA+TGG | - | chr5_1:11484900-11484919 | Msa0717610:CDS | 30.0% | |
| GAAAAGATGAATGAACCAAT+AGG | + | chr5_1:11484957-11484976 | None:intergenic | 30.0% | |
| !! | ATTGGTTCATTCATCTTTTC+TGG | - | chr5_1:11484957-11484976 | Msa0717610:CDS | 30.0% |
| TAGTGGCTTCAATATCATAA+AGG | + | chr5_1:11484998-11485017 | None:intergenic | 30.0% | |
| ! | TTGTTCTAAATGCAAGAAAC+AGG | + | chr5_1:11485118-11485137 | None:intergenic | 30.0% |
| ACATATTGCTTGTACCCATA+TGG | + | chr5_1:11482183-11482202 | None:intergenic | 35.0% | |
| ATATGGGTACAAGCAATATG+TGG | - | chr5_1:11482182-11482201 | Msa0717610:CDS | 35.0% | |
| ! | ATCATGGGATTCATTGGTTA+TGG | - | chr5_1:11482377-11482396 | Msa0717610:CDS | 35.0% |
| GTTATGTTTACCAGCCAATA+AGG | + | chr5_1:11482443-11482462 | None:intergenic | 35.0% | |
| ! | CAACATGATTTGTGAATGGA+AGG | + | chr5_1:11482556-11482575 | None:intergenic | 35.0% |
| CAAAAATCGACTAACCTGAA+GGG | - | chr5_1:11482616-11482635 | Msa0717610:intron | 35.0% | |
| TGTACACAGAACTTTGTTCT+GGG | + | chr5_1:11482686-11482705 | None:intergenic | 35.0% | |
| ! | AACGAACCCTGATAATTTGT+AGG | - | chr5_1:11482844-11482863 | Msa0717610:intron | 35.0% |
| TAAGAGCTTGTGAAACTGAT+TGG | - | chr5_1:11482905-11482924 | Msa0717610:intron | 35.0% | |
| AAGAGCTTGTGAAACTGATT+GGG | - | chr5_1:11482906-11482925 | Msa0717610:intron | 35.0% | |
| AAGCTATCTTGGAGAACTTA+TGG | + | chr5_1:11482985-11483004 | None:intergenic | 35.0% | |
| TATATACTAGGACTGGATGT+TGG | - | chr5_1:11483116-11483135 | Msa0717610:intron | 35.0% | |
| ATGAATACAACATTTCGGGA+AGG | - | chr5_1:11483139-11483158 | Msa0717610:intron | 35.0% | |
| TGTATATTCTTGTGTATGGG+TGG | - | chr5_1:11483206-11483225 | Msa0717610:intron | 35.0% | |
| AGAAACTTTCCAAAAAACCG+CGG | - | chr5_1:11483275-11483294 | Msa0717610:intron | 35.0% | |
| GACAGTAGCTATTTATCTCT+TGG | - | chr5_1:11483532-11483551 | Msa0717610:CDS | 35.0% | |
| !! | TTGTTTGTGTCATTTCTCTG+TGG | - | chr5_1:11483845-11483864 | Msa0717610:CDS | 35.0% |
| GATGAATAACTTGGGACAAA+TGG | - | chr5_1:11483889-11483908 | Msa0717610:CDS | 35.0% | |
| TGAACAAACAGCAATGACTA+GGG | + | chr5_1:11484028-11484047 | None:intergenic | 35.0% | |
| TTGAACAAACAGCAATGACT+AGG | + | chr5_1:11484029-11484048 | None:intergenic | 35.0% | |
| TGTCAATGCAATGACAGTTT+AGG | - | chr5_1:11484140-11484159 | Msa0717610:intron | 35.0% | |
| ! | CTGAACCTAACTTGTGTTAA+AGG | - | chr5_1:11484287-11484306 | Msa0717610:intron | 35.0% |
| GAGTTCATGACAGTTCAATT+CGG | + | chr5_1:11484525-11484544 | None:intergenic | 35.0% | |
| ATTGAACTGTCATGAACTCT+CGG | - | chr5_1:11484526-11484545 | Msa0717610:intron | 35.0% | |
| !!! | ATTTTAAAATGTGGTCGCCT+AGG | + | chr5_1:11484611-11484630 | None:intergenic | 35.0% |
| TCTCAGATTCTGATGTTCTT+TGG | - | chr5_1:11484768-11484787 | Msa0717610:intron | 35.0% | |
| GTTCTTTGGTTACATTGCAT+TGG | - | chr5_1:11484782-11484801 | Msa0717610:intron | 35.0% | |
| GAACCAATATATAGTGATCC+TGG | + | chr5_1:11484819-11484838 | None:intergenic | 35.0% | |
| CAATAGGAAGGTTAAGAATG+AGG | + | chr5_1:11484941-11484960 | None:intergenic | 35.0% | |
| CTCATTCTTAACCTTCCTAT+TGG | - | chr5_1:11484939-11484958 | Msa0717610:CDS | 35.0% | |
| AGATGAATGAACCAATAGGA+AGG | + | chr5_1:11484953-11484972 | None:intergenic | 35.0% | |
| CATGCTTGTGTATGTGATTA+TGG | - | chr5_1:11485061-11485080 | Msa0717610:CDS | 35.0% | |
| TTTGCAGCTGAAAAATGGCT+AGG | - | chr5_1:11482146-11482165 | Msa0717610:CDS | 40.0% | |
| TAGGATTTGTGACAGCCATA+TGG | - | chr5_1:11482165-11482184 | Msa0717610:CDS | 40.0% | |
| AGGATTTGTGACAGCCATAT+GGG | - | chr5_1:11482166-11482185 | Msa0717610:CDS | 40.0% | |
| CTCTCTGTTGCTAAAGATGT+TGG | - | chr5_1:11482281-11482300 | Msa0717610:CDS | 40.0% | |
| !! | TCTGATGATTGGTGCTATCA+TGG | - | chr5_1:11482361-11482380 | Msa0717610:CDS | 40.0% |
| !! | CTGATGATTGGTGCTATCAT+GGG | - | chr5_1:11482362-11482381 | Msa0717610:CDS | 40.0% |
| ! | TCATTGGTTATGGAGCTCAA+TGG | - | chr5_1:11482387-11482406 | Msa0717610:CDS | 40.0% |
| TTACCAGCCAATAAGGAAGA+GGG | + | chr5_1:11482436-11482455 | None:intergenic | 40.0% | |
| TTTACCAGCCAATAAGGAAG+AGG | + | chr5_1:11482437-11482456 | None:intergenic | 40.0% | |
| !! | CCTTCAGGTTAGTCGATTTT+TGG | + | chr5_1:11482618-11482637 | None:intergenic | 40.0% |
| CCAAAAATCGACTAACCTGA+AGG | - | chr5_1:11482615-11482634 | Msa0717610:intron | 40.0% | |
| GTGTACACAGAACTTTGTTC+TGG | + | chr5_1:11482687-11482706 | None:intergenic | 40.0% | |
| ! | TATCAGGGTTCGTTTTCCTT+AGG | + | chr5_1:11482838-11482857 | None:intergenic | 40.0% |
| AAACTGATTGGGAGAGCTTA+GGG | - | chr5_1:11482917-11482936 | Msa0717610:intron | 40.0% | |
| TCCAATTTCCGGCATTCTAA+AGG | - | chr5_1:11483298-11483317 | Msa0717610:intron | 40.0% | |
| CCAATTTCCGGCATTCTAAA+GGG | - | chr5_1:11483299-11483318 | Msa0717610:intron | 40.0% | |
| !! | TACATAGCCCTTTAGAATGC+CGG | + | chr5_1:11483309-11483328 | None:intergenic | 40.0% |
| TAGAAACTTAGATGGGTCTG+AGG | + | chr5_1:11483378-11483397 | None:intergenic | 40.0% | |
| GCAATGAGACAAATGATAGC+AGG | + | chr5_1:11483419-11483438 | None:intergenic | 40.0% | |
| TCTTCTGTAGAAGTTGAAGC+TGG | + | chr5_1:11483467-11483486 | None:intergenic | 40.0% | |
| CTCTTGGCATTTGATATCTC+TGG | - | chr5_1:11483548-11483567 | Msa0717610:CDS | 40.0% | |
| CAAGAAGTGGCATAGCTAAT+AGG | + | chr5_1:11483622-11483641 | None:intergenic | 40.0% | |
| ACAGGTTCATGAACCTTTGT+TGG | - | chr5_1:11483694-11483713 | Msa0717610:CDS | 40.0% | |
| TGAACCTTTGTTGGCACAAA+AGG | - | chr5_1:11483703-11483722 | Msa0717610:CDS | 40.0% | |
| ! | GAAACCTTTTGTGCCAACAA+AGG | + | chr5_1:11483710-11483729 | None:intergenic | 40.0% |
| AAAGGAAGAGATCTGTACCA+AGG | - | chr5_1:11483736-11483755 | Msa0717610:CDS | 40.0% | |
| AATCTCAACTTCCTCTACCT+TGG | + | chr5_1:11483756-11483775 | None:intergenic | 40.0% | |
| GTATGCTCTTCTCCTATAAC+TGG | + | chr5_1:11483788-11483807 | None:intergenic | 40.0% | |
| TTCTTTGGACGCATTCTTTC+TGG | - | chr5_1:11483971-11483990 | Msa0717610:CDS | 40.0% | |
| CACTCTCTGAATACTACATC+AGG | - | chr5_1:11483996-11484015 | Msa0717610:CDS | 40.0% | |
| CACTAGGACTGTTTATGGTT+CGG | - | chr5_1:11484214-11484233 | Msa0717610:intron | 40.0% | |
| !! | GTTTATGGTTCGGTTCAAGA+AGG | - | chr5_1:11484224-11484243 | Msa0717610:intron | 40.0% |
| !!! | GTTCTTCCGGTTTGGTTTTT+TGG | + | chr5_1:11484468-11484487 | None:intergenic | 40.0% |
| ! | TGGTTACATTGCATTGGCAA+TGG | - | chr5_1:11484788-11484807 | Msa0717610:intron | 40.0% |
| !! | ATCTTTTCTGGTCTCATTGC+CGG | - | chr5_1:11484969-11484988 | Msa0717610:CDS | 40.0% |
| TATGGCTTTCGCTTGTGTAT+TGG | - | chr5_1:11485079-11485098 | Msa0717610:CDS | 40.0% | |
| ATGGCTTTCGCTTGTGTATT+GGG | - | chr5_1:11485080-11485099 | Msa0717610:CDS | 40.0% | |
| !! | CAGGTCTTGTTTCTGATCGT+TGG | - | chr5_1:11482324-11482343 | Msa0717610:CDS | 45.0% |
| ! | GGTGCTATCATGGGATTCAT+TGG | - | chr5_1:11482371-11482390 | Msa0717610:CDS | 45.0% |
| AAGGAAGAGGGGCTATTCTT+TGG | + | chr5_1:11482424-11482443 | None:intergenic | 45.0% | |
| GAATAGCCCCTCTTCCTTAT+TGG | - | chr5_1:11482426-11482445 | Msa0717610:CDS | 45.0% | |
| TACCAGCCAATAAGGAAGAG+GGG | + | chr5_1:11482435-11482454 | None:intergenic | 45.0% | |
| !! | GTTCTGGGTCTGGCTTTAAA+TGG | + | chr5_1:11482671-11482690 | None:intergenic | 45.0% |
| ! | ACAGAACTTTGTTCTGGGTC+TGG | + | chr5_1:11482681-11482700 | None:intergenic | 45.0% |
| TTGTAACTCTCCGGTTCCTA+AGG | - | chr5_1:11482819-11482838 | Msa0717610:intron | 45.0% | |
| ! | GGTTCGTTTTCCTTAGGAAC+CGG | + | chr5_1:11482832-11482851 | None:intergenic | 45.0% |
| GAAACTGATTGGGAGAGCTT+AGG | - | chr5_1:11482916-11482935 | Msa0717610:intron | 45.0% | |
| !!! | GAAATTGGACCGCGGTTTTT+TGG | + | chr5_1:11483287-11483306 | None:intergenic | 45.0% |
| AAAAACCGCGGTCCAATTTC+CGG | - | chr5_1:11483287-11483306 | Msa0717610:intron | 45.0% | |
| !! | CCCTTTAGAATGCCGGAAAT+TGG | + | chr5_1:11483302-11483321 | None:intergenic | 45.0% |
| ! | GGCATTCTAAAGGGCTATGT+AGG | - | chr5_1:11483308-11483327 | Msa0717610:CDS | 45.0% |
| AAGCTGGTGGAGTTTCATGA+AGG | + | chr5_1:11483451-11483470 | None:intergenic | 45.0% | |
| TCTGTAGAAGTTGAAGCTGG+TGG | + | chr5_1:11483464-11483483 | None:intergenic | 45.0% | |
| AGAGATCTGTACCAAGGTAG+AGG | - | chr5_1:11483742-11483761 | Msa0717610:CDS | 45.0% | |
| !! | GTGTCATTTCTCTGTGGTGT+TGG | - | chr5_1:11483851-11483870 | Msa0717610:CDS | 45.0% |
| ! | TTTCTCTGTGGTGTTGGAAC+AGG | - | chr5_1:11483857-11483876 | Msa0717610:CDS | 45.0% |
| TAACTTGGGACAAATGGGAC+AGG | - | chr5_1:11483895-11483914 | Msa0717610:CDS | 45.0% | |
| CGAACCATAAACAGTCCTAG+TGG | + | chr5_1:11484216-11484235 | None:intergenic | 45.0% | |
| !! | ACAGTTTGGTTCTTCCGGTT+TGG | + | chr5_1:11484476-11484495 | None:intergenic | 45.0% |
| GTGAACTATCCGTCACAGTT+TGG | + | chr5_1:11484490-11484509 | None:intergenic | 45.0% | |
| !! | AATAGTTCTGAAGCTGCTGC+TGG | + | chr5_1:11484885-11484904 | None:intergenic | 45.0% |
| GCAGCAGCTTCAGAACTATT+TGG | - | chr5_1:11484885-11484904 | Msa0717610:CDS | 45.0% | |
| ATTGAAGCCACTAGTGTACC+AGG | - | chr5_1:11485005-11485024 | Msa0717610:CDS | 45.0% | |
| TGGCTTTCGCTTGTGTATTG+GGG | - | chr5_1:11485081-11485100 | Msa0717610:CDS | 45.0% | |
| TTGTGTATTGGGGTGTGGAT+TGG | - | chr5_1:11485091-11485110 | Msa0717610:CDS | 45.0% | |
| CAATCACACCGCTCACTTGT+GGG | - | chr5_1:11482641-11482660 | Msa0717610:intron | 50.0% | |
| AATCACACCGCTCACTTGTG+GGG | - | chr5_1:11482642-11482661 | Msa0717610:intron | 50.0% | |
| TGGGTGGAAACAGCACAACA+TGG | - | chr5_1:11483222-11483241 | Msa0717610:intron | 50.0% | |
| TGTAAAGGATCGCGACCACT+AGG | - | chr5_1:11484198-11484217 | Msa0717610:intron | 50.0% | |
| GCGACCACTAGGACTGTTTA+TGG | - | chr5_1:11484209-11484228 | Msa0717610:intron | 50.0% | |
| !! | CCGTCACAGTTTGGTTCTTC+CGG | + | chr5_1:11484481-11484500 | None:intergenic | 50.0% |
| CCGGAAGAACCAAACTGTGA+CGG | - | chr5_1:11484478-11484497 | Msa0717610:intron | 50.0% | |
| GCAGAAAATCAGGCATGCCA+AGG | - | chr5_1:11484727-11484746 | Msa0717610:intron | 50.0% | |
| ! | CAGGCATGCCAAGGTTAGTT+TGG | - | chr5_1:11484736-11484755 | Msa0717610:intron | 50.0% |
| GCTGCGTTCCAAACTAACCT+TGG | + | chr5_1:11484747-11484766 | None:intergenic | 50.0% | |
| TTCGCTTGTGTATTGGGGTG+TGG | - | chr5_1:11485086-11485105 | Msa0717610:CDS | 50.0% | |
| AGCCCCTCTTCCTTATTGGC+TGG | - | chr5_1:11482430-11482449 | Msa0717610:CDS | 55.0% | |
| CCACAAGTGAGCGGTGTGAT+TGG | + | chr5_1:11482643-11482662 | None:intergenic | 55.0% | |
| CCAATCACACCGCTCACTTG+TGG | - | chr5_1:11482640-11482659 | Msa0717610:intron | 55.0% | |
| ATCACACCGCTCACTTGTGG+GGG | - | chr5_1:11482643-11482662 | Msa0717610:intron | 55.0% | |
| GAATGCCGGAAATTGGACCG+CGG | + | chr5_1:11483295-11483314 | None:intergenic | 55.0% | |
| GGACAAATGGGACAGGCACT+TGG | - | chr5_1:11483902-11483921 | Msa0717610:CDS | 55.0% | |
| ! | GCATTGGCAATGGCCTTACC+AGG | - | chr5_1:11484798-11484817 | Msa0717610:intron | 55.0% |
| GAAGCCACTAGTGTACCAGG+AGG | - | chr5_1:11485008-11485027 | Msa0717610:CDS | 55.0% | |
| ! | GCGGTGTGATTGGTCCCTTC+AGG | + | chr5_1:11482633-11482652 | None:intergenic | 60.0% |
| ATGGAGCCCCCACAAGTGAG+CGG | + | chr5_1:11482652-11482671 | None:intergenic | 60.0% | |
| GCCACTAGTGTACCAGGAGG+CGG | - | chr5_1:11485011-11485030 | Msa0717610:CDS | 60.0% | |
| TCCGCCTCCTGGTACACTAG+TGG | + | chr5_1:11485015-11485034 | None:intergenic | 60.0% | |
| GTGCAAGTGTTTCCGCCTCC+TGG | + | chr5_1:11485026-11485045 | None:intergenic | 60.0% | |
| GGAGGCGGAAACACTTGCAC+TGG | - | chr5_1:11485026-11485045 | Msa0717610:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 11482122 | 11485199 | 11482122 | ID=Msa0717610;Name=Msa0717610 |
| chr5_1 | mRNA | 11482122 | 11485199 | 11482122 | ID=Msa0717610-mRNA-1;Parent=Msa0717610;Name=Msa0717610-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0|0|1|1|1|3|0|537 |
| chr5_1 | exon | 11484870 | 11485199 | 11484870 | ID=Msa0717610-mRNA-1:exon:4672;Parent=Msa0717610-mRNA-1 |
| chr5_1 | exon | 11483304 | 11484118 | 11483304 | ID=Msa0717610-mRNA-1:exon:4671;Parent=Msa0717610-mRNA-1 |
| chr5_1 | exon | 11482122 | 11482590 | 11482122 | ID=Msa0717610-mRNA-1:exon:4670;Parent=Msa0717610-mRNA-1 |
| chr5_1 | CDS | 11484870 | 11485199 | 11484870 | ID=Msa0717610-mRNA-1:cds;Parent=Msa0717610-mRNA-1 |
| chr5_1 | CDS | 11483304 | 11484118 | 11483304 | ID=Msa0717610-mRNA-1:cds;Parent=Msa0717610-mRNA-1 |
| chr5_1 | CDS | 11482122 | 11482590 | 11482122 | ID=Msa0717610-mRNA-1:cds;Parent=Msa0717610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
