Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720390 | XP_027188128.1 | 71.429 | 511 | 100 | 4 | 1 | 483 | 125 | 617 | 0.0 | 716 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720390 | sp|O04408|KSA_PEA | 68.905 | 402 | 91 | 2 | 2 | 369 | 188 | 589 | 0.0 | 578 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720390 | A0A3Q7XMQ5 | 71.429 | 511 | 100 | 4 | 1 | 483 | 125 | 617 | 0.0 | 716 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0648080 | Msa0720390 | 0.801081 | 1.065145e-48 | -8.615850e-47 |
| Msa0720390 | Msa0820850 | 0.806062 | 9.870612e-50 | -8.615850e-47 |
| Msa0720390 | Msa0861130 | 0.805768 | 1.138308e-49 | -8.615850e-47 |
| Msa0720390 | Msa0927380 | 0.826506 | 2.613914e-54 | -8.615850e-47 |
| Msa0720390 | Msa0964900 | 0.803672 | 3.117324e-49 | -8.615850e-47 |
| Msa0233080 | Msa0720390 | 0.808822 | 2.563801e-50 | -8.615850e-47 |
| Msa0545700 | Msa0720390 | 0.816245 | 6.106620e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720390 | MtrunA17_Chr7g0259881 | 84.367 | 403 | 30 | 1 | 1 | 370 | 90 | 492 | 0.0 | 699 |
| Msa0720390 | MtrunA17_Chr7g0259881 | 57.576 | 132 | 28 | 1 | 380 | 483 | 563 | 694 | 1.16e-33 | 134 |
| Msa0720390 | MtrunA17_Chr7g0218001 | 71.535 | 404 | 82 | 1 | 2 | 372 | 208 | 611 | 0.0 | 599 |
| Msa0720390 | MtrunA17_Chr5g0411111 | 94.615 | 130 | 7 | 0 | 192 | 321 | 1 | 130 | 5.19e-86 | 260 |
| Msa0720390 | MtrunA17_Chr8g0370481 | 62.264 | 212 | 51 | 3 | 208 | 418 | 6 | 189 | 3.57e-81 | 252 |
| Msa0720390 | MtrunA17_Chr7g0218031 | 70.833 | 168 | 47 | 1 | 2 | 169 | 222 | 387 | 3.97e-77 | 246 |
| Msa0720390 | MtrunA17_Chr7g0218041 | 57.944 | 214 | 57 | 1 | 192 | 372 | 1 | 214 | 7.12e-73 | 236 |
| Msa0720390 | MtrunA17_Chr3g0101681 | 30.467 | 407 | 231 | 10 | 3 | 370 | 139 | 532 | 6.61e-49 | 179 |
| Msa0720390 | MtrunA17_Chr2g0310121 | 29.777 | 403 | 239 | 8 | 3 | 370 | 138 | 531 | 4.69e-47 | 174 |
| Msa0720390 | MtrunA17_Chr6g0471761 | 57.325 | 157 | 21 | 4 | 170 | 321 | 26 | 141 | 1.19e-45 | 157 |
| Msa0720390 | MtrunA17_Chr5g0411121 | 90.476 | 42 | 4 | 0 | 141 | 182 | 1 | 42 | 1.47e-20 | 84.7 |
| Msa0720390 | MtrunA17_Chr7g0237071 | 31.515 | 165 | 97 | 4 | 144 | 307 | 16 | 165 | 5.31e-19 | 85.9 |
| Msa0720390 | MtrunA17_Chr7g0237031 | 31.515 | 165 | 97 | 4 | 144 | 307 | 16 | 165 | 1.23e-17 | 84.0 |
| Msa0720390 | MtrunA17_Chr7g0236951 | 30.909 | 165 | 98 | 4 | 144 | 307 | 16 | 165 | 3.47e-17 | 82.4 |
| Msa0720390 | MtrunA17_Chr4g0024691 | 26.667 | 255 | 150 | 8 | 138 | 370 | 73 | 312 | 3.65e-17 | 84.3 |
| Msa0720390 | MtrunA17_Chr7g0237011 | 31.515 | 165 | 97 | 4 | 144 | 307 | 16 | 165 | 3.74e-17 | 84.0 |
| Msa0720390 | MtrunA17_Chr8g0358581 | 80.435 | 46 | 9 | 0 | 325 | 370 | 27 | 72 | 4.02e-17 | 77.0 |
| Msa0720390 | MtrunA17_Chr2g0281731 | 28.102 | 274 | 150 | 9 | 28 | 260 | 110 | 377 | 4.44e-17 | 83.2 |
| Msa0720390 | MtrunA17_Chr6g0465931 | 34.706 | 170 | 97 | 4 | 138 | 307 | 30 | 185 | 4.94e-17 | 82.4 |
| Msa0720390 | MtrunA17_Chr6g0466111 | 34.706 | 170 | 97 | 4 | 138 | 307 | 30 | 185 | 5.42e-17 | 82.0 |
| Msa0720390 | MtrunA17_Chr7g0237001 | 31.515 | 165 | 97 | 4 | 144 | 307 | 71 | 220 | 5.45e-17 | 83.6 |
| Msa0720390 | MtrunA17_Chr7g0237041 | 31.515 | 165 | 97 | 4 | 144 | 307 | 71 | 220 | 5.45e-17 | 83.6 |
| Msa0720390 | MtrunA17_Chr7g0237081 | 31.515 | 165 | 97 | 4 | 144 | 307 | 71 | 220 | 5.45e-17 | 83.6 |
| Msa0720390 | MtrunA17_Chr7g0237051 | 31.515 | 165 | 97 | 4 | 144 | 307 | 71 | 220 | 5.45e-17 | 83.6 |
| Msa0720390 | MtrunA17_Chr6g0465981 | 34.706 | 170 | 97 | 4 | 138 | 307 | 65 | 220 | 8.20e-17 | 82.0 |
| Msa0720390 | MtrunA17_Chr6g0465871 | 34.706 | 170 | 97 | 4 | 138 | 307 | 65 | 220 | 8.20e-17 | 82.0 |
| Msa0720390 | MtrunA17_Chr6g0466081 | 34.706 | 170 | 97 | 4 | 138 | 307 | 65 | 220 | 8.20e-17 | 82.0 |
| Msa0720390 | MtrunA17_Chr7g0236961 | 30.909 | 165 | 98 | 4 | 144 | 307 | 16 | 165 | 1.07e-16 | 82.8 |
| Msa0720390 | MtrunA17_Chr7g0236991 | 30.909 | 165 | 98 | 4 | 144 | 307 | 71 | 220 | 1.31e-16 | 82.4 |
| Msa0720390 | MtrunA17_Chr6g0465851 | 34.503 | 171 | 96 | 5 | 138 | 307 | 30 | 185 | 1.86e-16 | 82.0 |
| Msa0720390 | MtrunA17_Chr6g0465911 | 34.503 | 171 | 96 | 5 | 138 | 307 | 65 | 220 | 2.43e-16 | 81.6 |
| Msa0720390 | MtrunA17_Chr4g0042111 | 31.285 | 179 | 109 | 4 | 129 | 307 | 65 | 229 | 2.68e-16 | 81.6 |
| Msa0720390 | MtrunA17_Chr6g0466051 | 34.503 | 171 | 96 | 5 | 138 | 307 | 65 | 220 | 3.06e-16 | 81.3 |
| Msa0720390 | MtrunA17_Chr4g0023911 | 30.233 | 172 | 102 | 6 | 144 | 313 | 98 | 253 | 4.13e-16 | 80.9 |
| Msa0720390 | MtrunA17_Chr8g0336181 | 31.707 | 164 | 100 | 3 | 144 | 307 | 71 | 222 | 6.83e-16 | 80.5 |
| Msa0720390 | MtrunA17_Chr6g0465441 | 34.503 | 171 | 96 | 5 | 138 | 307 | 65 | 220 | 6.91e-16 | 80.1 |
| Msa0720390 | MtrunA17_Chr2g0310331 | 27.823 | 248 | 141 | 7 | 144 | 370 | 108 | 338 | 8.26e-16 | 80.1 |
| Msa0720390 | MtrunA17_Chr5g0411101 | 97.143 | 35 | 1 | 0 | 430 | 464 | 1 | 35 | 2.09e-15 | 70.5 |
| Msa0720390 | MtrunA17_Chr2g0319051 | 29.944 | 177 | 110 | 4 | 136 | 311 | 22 | 185 | 2.54e-15 | 78.6 |
| Msa0720390 | MtrunA17_Chr5g0425371 | 26.908 | 249 | 145 | 8 | 144 | 370 | 71 | 304 | 5.44e-15 | 77.4 |
| Msa0720390 | MtrunA17_Chr4g0008621 | 29.609 | 179 | 106 | 5 | 136 | 310 | 71 | 233 | 5.72e-15 | 77.0 |
| Msa0720390 | MtrunA17_Chr2g0319041 | 30.435 | 184 | 99 | 7 | 136 | 310 | 63 | 226 | 8.16e-15 | 77.0 |
| Msa0720390 | MtrunA17_Chr5g0431571 | 27.755 | 245 | 137 | 9 | 138 | 358 | 60 | 288 | 1.95e-14 | 75.9 |
| Msa0720390 | MtrunA17_Chr6g0466021 | 32.680 | 153 | 83 | 4 | 138 | 287 | 65 | 200 | 6.00e-13 | 67.8 |
| Msa0720390 | MtrunA17_Chr6g0471771 | 87.879 | 33 | 4 | 0 | 338 | 370 | 1 | 33 | 2.41e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720390 | AT4G02780.1 | 63.591 | 401 | 113 | 1 | 2 | 369 | 193 | 593 | 0.0 | 544 |
| Msa0720390 | AT1G79460.1 | 30.576 | 399 | 215 | 10 | 16 | 370 | 149 | 529 | 5.56e-43 | 163 |
| Msa0720390 | AT1G61120.1 | 26.266 | 316 | 180 | 8 | 16 | 305 | 152 | 440 | 8.14e-20 | 93.6 |
| Msa0720390 | AT4G16740.2 | 29.379 | 177 | 115 | 3 | 137 | 313 | 74 | 240 | 6.33e-12 | 67.8 |
| Msa0720390 | AT4G16740.4 | 29.379 | 177 | 115 | 3 | 137 | 313 | 74 | 240 | 6.54e-12 | 67.4 |
| Msa0720390 | AT4G16740.3 | 29.379 | 177 | 115 | 3 | 137 | 313 | 74 | 240 | 6.54e-12 | 67.4 |
| Msa0720390 | AT4G16740.1 | 29.379 | 177 | 115 | 3 | 137 | 313 | 74 | 240 | 1.30e-11 | 67.4 |
Find 97 sgRNAs with CRISPR-Local
Find 417 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGTTTCTTTGTTAAATATT+TGG | 0.183899 | 5_1:+16374058 | None:intergenic |
| TTTAGAGGGAATGCAGAATT+TGG | 0.220489 | 5_1:-16376947 | Msa0720390:CDS |
| ATTAAGACTCTTACCTATAA+AGG | 0.243263 | 5_1:+16373430 | None:intergenic |
| CTAATGAACTCCTAGATAAA+TGG | 0.248234 | 5_1:-16374031 | Msa0720390:CDS |
| AAGGAATGAATTCTTGATAT+TGG | 0.277017 | 5_1:+16370356 | None:intergenic |
| CAATTGGTGCTTCAAAATTC+TGG | 0.290889 | 5_1:-16370393 | Msa0720390:CDS |
| CACCTCGCCAGGTAAATCTT+TGG | 0.322713 | 5_1:+16374001 | None:intergenic |
| GGAAAATCTTAACAAGCTTC+AGG | 0.334054 | 5_1:-16377306 | Msa0720390:CDS |
| TAAATTTAACCGCCGGATAT+TGG | 0.355095 | 5_1:-16370884 | Msa0720390:CDS |
| GGATTGGCAAGACCCTTTAT+AGG | 0.365996 | 5_1:-16373443 | Msa0720390:intron |
| ATATTTGGCCGAGAAATTCT+TGG | 0.372112 | 5_1:+16374073 | None:intergenic |
| AACATTGCTACACAGTTTAG+AGG | 0.375401 | 5_1:-16376962 | Msa0720390:CDS |
| GTAATATCTTGTCTCCAATC+TGG | 0.379626 | 5_1:+16373497 | None:intergenic |
| AAGTAATTCAGCTCCTCTTT+CGG | 0.382639 | 5_1:+16370917 | None:intergenic |
| AGATATTACCTTGAACAATA+TGG | 0.383236 | 5_1:-16373483 | Msa0720390:CDS |
| TACATGGAATCAGAACTAAA+AGG | 0.384054 | 5_1:-16372544 | Msa0720390:CDS |
| GAATCAGAACTAAAAGGGTT+TGG | 0.385249 | 5_1:-16372538 | Msa0720390:CDS |
| GACGAAACTAAGTGCCTGTT+TGG | 0.393855 | 5_1:-16372392 | Msa0720390:intron |
| TTTATCAATATGAGAGGAAA+TGG | 0.394650 | 5_1:+16370288 | None:intergenic |
| TTTAGATATTGGACTGAGAA+AGG | 0.405340 | 5_1:-16376392 | Msa0720390:intron |
| TCTGCAGGTGGGTTATGCTT+TGG | 0.412271 | 5_1:-16373544 | Msa0720390:intron |
| TTAAGACTCTTACCTATAAA+GGG | 0.418091 | 5_1:+16373431 | None:intergenic |
| TTTCACCACCATATTGTTCA+AGG | 0.429693 | 5_1:+16373475 | None:intergenic |
| TGCATTTCTGACTCTATCTC+CGG | 0.431061 | 5_1:+16370426 | None:intergenic |
| CGAGGATGCCAAGAATTTCT+CGG | 0.432780 | 5_1:-16374081 | Msa0720390:CDS |
| GACTGAGAAAGGTATTTGTT+GGG | 0.434396 | 5_1:-16376381 | Msa0720390:CDS |
| GGACTGAGAAAGGTATTTGT+TGG | 0.435460 | 5_1:-16376382 | Msa0720390:CDS |
| CAGCTAAATCAAGCTGTTAC+CGG | 0.436867 | 5_1:-16374158 | Msa0720390:CDS |
| AGGGAATGCAGAATTTGGAT+TGG | 0.446253 | 5_1:-16376942 | Msa0720390:CDS |
| ATGGTGGTGAAAATGATGTT+TGG | 0.449235 | 5_1:-16373464 | Msa0720390:CDS |
| ACCATGTGCAGCACCTCTCT+TGG | 0.457014 | 5_1:+16376991 | None:intergenic |
| AAGTCCACAGGAAACACATT+TGG | 0.461999 | 5_1:+16376634 | None:intergenic |
| TGAAAATGCTCTCCACTACT+TGG | 0.462206 | 5_1:-16376833 | Msa0720390:CDS |
| TGGACTTATTTGAACATATG+TGG | 0.466234 | 5_1:-16376618 | Msa0720390:CDS |
| CAATGGGATTTAGACTGCTT+AGG | 0.475160 | 5_1:-16376322 | Msa0720390:CDS |
| AGAACAAGAATGACCCATCT+TGG | 0.475991 | 5_1:+16376896 | None:intergenic |
| AAATTAGAACTCACCTCGCC+AGG | 0.483503 | 5_1:+16373990 | None:intergenic |
| AATGCAAGAACTTGTGCAAT+TGG | 0.485334 | 5_1:-16370409 | Msa0720390:CDS |
| GTGCTTCAAAATTCTGGAGA+TGG | 0.489030 | 5_1:-16370387 | Msa0720390:CDS |
| GGCAAAAGTGGTTCTCAAGC+TGG | 0.491243 | 5_1:-16370959 | Msa0720390:CDS |
| GATATAGATGACACGGCAAT+GGG | 0.494590 | 5_1:-16376338 | Msa0720390:CDS |
| CTGAAGTTACAGTCCCAAGA+TGG | 0.494983 | 5_1:-16376910 | Msa0720390:CDS |
| AAAGTTGTCAACAAGTTCAA+TGG | 0.501737 | 5_1:-16376808 | Msa0720390:CDS |
| TCAACTTACAGGGTGAAACT+TGG | 0.504271 | 5_1:+16376288 | None:intergenic |
| ACATGGAATCAGAACTAAAA+GGG | 0.505316 | 5_1:-16372543 | Msa0720390:CDS |
| GTATGCTAGCTTACCCAGAT+TGG | 0.508010 | 5_1:-16373511 | Msa0720390:CDS |
| TTTAGACTGCTTAGGTTGCA+TGG | 0.508052 | 5_1:-16376314 | Msa0720390:CDS |
| TAATATCTTGTCTCCAATCT+GGG | 0.508297 | 5_1:+16373498 | None:intergenic |
| GAACAAGAATGACCCATCTT+GGG | 0.511997 | 5_1:+16376897 | None:intergenic |
| AACAGCTTGATTTAGCTGTC+CGG | 0.522124 | 5_1:+16374163 | None:intergenic |
| AGATATAGATGACACGGCAA+TGG | 0.528847 | 5_1:-16376339 | Msa0720390:CDS |
| AATGCTGAGCACATGCCAAT+CGG | 0.534987 | 5_1:-16377278 | Msa0720390:CDS |
| ACTTACAGGGTGAAACTTGG+TGG | 0.535700 | 5_1:+16376291 | None:intergenic |
| AAGTCTCTCTAGAGACCTCT+CGG | 0.538961 | 5_1:+16372456 | None:intergenic |
| GTCAACAAGTTCAATGGAGG+AGG | 0.539966 | 5_1:-16376802 | Msa0720390:intron |
| AAACTGTGTAGCAATGTTGT+TGG | 0.540066 | 5_1:+16376967 | None:intergenic |
| TTTAAGATAGGAGAATCATC+GGG | 0.541458 | 5_1:+16377197 | None:intergenic |
| TTCTCAAGCTGGCACTATGA+AGG | 0.545337 | 5_1:-16370948 | Msa0720390:CDS |
| TGAGCAAAAGCTGTGGATGA+AGG | 0.547655 | 5_1:+16376871 | None:intergenic |
| CAAATCATAAATTTAACCGC+CGG | 0.549362 | 5_1:-16370891 | Msa0720390:CDS |
| TCTATATATTAGGTGGTACA+TGG | 0.552342 | 5_1:-16372560 | Msa0720390:intron |
| TGACAACTTTGTCCAAGTAG+TGG | 0.553169 | 5_1:+16376821 | None:intergenic |
| GGTGAAAATGATGTTTGGAT+TGG | 0.554107 | 5_1:-16373459 | Msa0720390:CDS |
| GAAAATATCTAGAAATTCCA+AGG | 0.555038 | 5_1:+16376575 | None:intergenic |
| GTGGATCGACTAGAACGCCT+TGG | 0.555414 | 5_1:-16376592 | Msa0720390:CDS |
| ATTTGAACATATGTGGGCTG+TGG | 0.568732 | 5_1:-16376611 | Msa0720390:CDS |
| GGACTTATTTGAACATATGT+GGG | 0.578013 | 5_1:-16376617 | Msa0720390:CDS |
| TGAAGTTACAGTCCCAAGAT+GGG | 0.583997 | 5_1:-16376909 | Msa0720390:CDS |
| AACCAAAGATTTACCTGGCG+AGG | 0.584354 | 5_1:-16374003 | Msa0720390:intron |
| CAAGAATTCATTCCTTGCGG+TGG | 0.587023 | 5_1:-16370349 | Msa0720390:CDS |
| AGTTCCAAATGTGTTTCCTG+TGG | 0.595920 | 5_1:-16376638 | Msa0720390:CDS |
| GAGAACTTTATCAATATGAG+AGG | 0.596468 | 5_1:+16370282 | None:intergenic |
| CGAGCTACATTGAGAAGCGA+AGG | 0.596731 | 5_1:+16377239 | None:intergenic |
| TTGTTGGGCAAGAAATTCAG+AGG | 0.597313 | 5_1:-16376366 | Msa0720390:CDS |
| ATATGTTCAAATAAGTCCAC+AGG | 0.598524 | 5_1:+16376622 | None:intergenic |
| ACATTGCTACACAGTTTAGA+GGG | 0.598802 | 5_1:-16376961 | Msa0720390:CDS |
| AATCTGTGAATTATGTGTCA+AGG | 0.601324 | 5_1:-16376537 | Msa0720390:intron |
| GTCTCTAGAGAGACTTGCAT+GGG | 0.601370 | 5_1:-16372449 | Msa0720390:CDS |
| GTTATGCTTTGGATGTGCCA+TGG | 0.603040 | 5_1:-16373533 | Msa0720390:CDS |
| AAAGCAACTTCAAATCCGAT+TGG | 0.605360 | 5_1:+16377263 | None:intergenic |
| GAAGGAAACAGATCCGAAAG+AGG | 0.605930 | 5_1:-16370930 | Msa0720390:CDS |
| TCTATATAGATCGAACATGC+CGG | 0.606152 | 5_1:+16374139 | None:intergenic |
| ACCAAGAGAGGTGCTGCACA+TGG | 0.609012 | 5_1:-16376992 | Msa0720390:CDS |
| AGTCTCTCTAGAGACCTCTC+GGG | 0.632560 | 5_1:+16372457 | None:intergenic |
| GATTGCTTATTATGTAGCAG+CGG | 0.637659 | 5_1:-16372494 | Msa0720390:CDS |
| TATCAAGAATTCATTCCTTG+CGG | 0.651985 | 5_1:-16370352 | Msa0720390:CDS |
| TGATAACAGAATACCAAGAG+AGG | 0.652079 | 5_1:-16377004 | Msa0720390:intron |
| ATCAAAACCAAAGATTTACC+TGG | 0.653369 | 5_1:-16374008 | Msa0720390:CDS |
| GGTCTCTAGAGAGACTTGCA+TGG | 0.655562 | 5_1:-16372450 | Msa0720390:CDS |
| GTTGTCAACAAGTTCAATGG+AGG | 0.658796 | 5_1:-16376805 | Msa0720390:CDS |
| TATTACCTTGAACAATATGG+TGG | 0.659457 | 5_1:-16373480 | Msa0720390:CDS |
| GGTTCAAGATATAGATGACA+CGG | 0.661235 | 5_1:-16376345 | Msa0720390:CDS |
| CTGGGTAAGCTAGCATACCA+TGG | 0.665423 | 5_1:+16373516 | None:intergenic |
| TCAAGAAGAGAAGATTCTCG+AGG | 0.665797 | 5_1:-16374099 | Msa0720390:CDS |
| ACATGCTAGTATCAATACAC+CGG | 0.686044 | 5_1:-16370445 | Msa0720390:CDS |
| CTAGCATATTTGATCCCGAG+AGG | 0.703725 | 5_1:-16372471 | Msa0720390:CDS |
| TTGCATATGAGCAAAAGCTG+TGG | 0.721138 | 5_1:+16376864 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATATATATTTATTATTA+GGG | + | chr5_1:16374426-16374445 | None:intergenic | 0.0% |
| !!! | TTTTATATATATTTATTATT+AGG | + | chr5_1:16374427-16374446 | None:intergenic | 0.0% |
| !!! | AAAAAGAGATATTTTTTTTA+GGG | + | chr5_1:16372788-16372807 | None:intergenic | 10.0% |
| !!! | AAAAAAGAGATATTTTTTTT+AGG | + | chr5_1:16372787-16372806 | None:intergenic | 10.0% |
| !!! | TAAAAAAAATATCTCTTTTT+TGG | - | chr5_1:16371418-16371437 | Msa0720390:intron | 10.0% |
| !! | GAAAAATAATTGAAAAAATA+CGG | - | chr5_1:16371733-16371752 | Msa0720390:intron | 10.0% |
| !!! | ATTTTCATTAGTATTTTTTT+CGG | - | chr5_1:16371955-16371974 | Msa0720390:intron | 10.0% |
| !! | TTAATGAAAAATAAAAATTC+TGG | + | chr5_1:16372277-16372296 | None:intergenic | 10.0% |
| !! | GAAAAAAATAAAAAAAATTC+TGG | + | chr5_1:16372471-16372490 | None:intergenic | 10.0% |
| !!! | TAAAAAAAATATCTCTTTTT+TGG | + | chr5_1:16371418-16371437 | None:intergenic | 10.0% |
| !!! | AAAAAAGAGATATTTTTTTT+AGG | - | chr5_1:16372787-16372806 | Msa0720390:intron | 10.0% |
| !!! | AAAAAGAGATATTTTTTTTA+GGG | - | chr5_1:16372788-16372807 | Msa0720390:intron | 10.0% |
| !! | ATTATAATGAATAATGTATT+AGG | - | chr5_1:16374907-16374926 | Msa0720390:intron | 10.0% |
| !! | CAATTAAATATCTATATATT+AGG | - | chr5_1:16374983-16375002 | Msa0720390:intron | 10.0% |
| !! | AAATAAGAATAAAAAAGATT+GGG | + | chr5_1:16375793-16375812 | None:intergenic | 10.0% |
| !! | AAAATAAGAATAAAAAAGAT+TGG | + | chr5_1:16375794-16375813 | None:intergenic | 10.0% |
| !!! | TCAAATATTTCTTTTAAGAT+AGG | + | chr5_1:16370371-16370390 | None:intergenic | 15.0% |
| !! | TCAATTTGATCATAATTTAT+TGG | - | chr5_1:16371341-16371360 | Msa0720390:intron | 15.0% |
| !!! | AAAAGAGATATTTTTTTTAG+GGG | + | chr5_1:16372789-16372808 | None:intergenic | 15.0% |
| !! | ATATCTGAAAAATTTGAAAA+CGG | - | chr5_1:16371850-16371869 | Msa0720390:intron | 15.0% |
| !! | ATTGAAAAAATTGAAAATTC+TGG | - | chr5_1:16371901-16371920 | Msa0720390:intron | 15.0% |
| !!! | TTTTCATTAGTATTTTTTTC+GGG | - | chr5_1:16371956-16371975 | Msa0720390:intron | 15.0% |
| !!! | ATTTTTGTGTATTTATAAAC+CGG | - | chr5_1:16371980-16371999 | Msa0720390:intron | 15.0% |
| !!! | ATTTTCATTAGTATTTTTTC+CGG | + | chr5_1:16372087-16372106 | None:intergenic | 15.0% |
| !! | TCTGAAAAAAATTAAAATTC+TGG | + | chr5_1:16372369-16372388 | None:intergenic | 15.0% |
| !!! | AAAAGAGATATTTTTTTTAG+GGG | - | chr5_1:16372789-16372808 | Msa0720390:intron | 15.0% |
| !!! | TTTTTGCTTATAAAAAAAGA+CGG | + | chr5_1:16372941-16372960 | None:intergenic | 15.0% |
| !!! | ACATGCATTTAATTTTATAT+TGG | - | chr5_1:16373116-16373135 | Msa0720390:intron | 15.0% |
| !!! | TTTTTGCTTATATTTTAGAA+CGG | - | chr5_1:16373224-16373243 | Msa0720390:intron | 15.0% |
| !! | ATTAGTTATATATAATTCAG+TGG | + | chr5_1:16373816-16373835 | None:intergenic | 15.0% |
| !! | TAAAAAACAAGAGATAAATT+GGG | - | chr5_1:16373934-16373953 | Msa0720390:intron | 15.0% |
| !! | AAAAAATAAGTACGAAATTT+AGG | + | chr5_1:16374519-16374538 | None:intergenic | 15.0% |
| !!! | AAATTTCGTACTTATTTTTT+TGG | - | chr5_1:16374519-16374538 | Msa0720390:intron | 15.0% |
| !!! | AATTTCGTACTTATTTTTTT+GGG | - | chr5_1:16374520-16374539 | Msa0720390:intron | 15.0% |
| !! | TATAGTATTAAACTCTAAAT+CGG | + | chr5_1:16374675-16374694 | None:intergenic | 15.0% |
| !! | TTAAATATCTATATATTAGG+TGG | - | chr5_1:16374986-16375005 | Msa0720390:intron | 15.0% |
| !! | GTATTTAATTGTAGAAAATT+TGG | + | chr5_1:16375840-16375859 | None:intergenic | 15.0% |
| !! | TTTCTACAATTAAATACTAA+AGG | - | chr5_1:16375843-16375862 | Msa0720390:intron | 15.0% |
| !! | TTCTACAATTAAATACTAAA+GGG | - | chr5_1:16375844-16375863 | Msa0720390:intron | 15.0% |
| !! | AGACACAAATTAATAAATAT+AGG | + | chr5_1:16376142-16376161 | None:intergenic | 15.0% |
| !! | TTCTTATTATTTGAATCAAA+TGG | - | chr5_1:16376432-16376451 | Msa0720390:intron | 15.0% |
| !!! | AATTAAAAATTTGAAATGCA+TGG | - | chr5_1:16377023-16377042 | Msa0720390:intron | 15.0% |
| !! | AAGAGTAAAATGAGAAATTA+AGG | - | chr5_1:16371307-16371326 | Msa0720390:intron | 20.0% |
| !!! | AAAGAGATATTTTTTTTAGG+GGG | + | chr5_1:16372790-16372809 | None:intergenic | 20.0% |
| !! | ACGGAAAAATTTAAAAATTC+AGG | - | chr5_1:16371752-16371771 | Msa0720390:intron | 20.0% |
| !! | AAACGGAATTCTTAAAAAAA+TGG | - | chr5_1:16371867-16371886 | Msa0720390:intron | 20.0% |
| !! | TTCTTAAAAAAATGGAATTC+TGG | - | chr5_1:16371875-16371894 | Msa0720390:intron | 20.0% |
| !!! | ATTGAAAATTCTGGAAAATA+CGG | - | chr5_1:16371910-16371929 | Msa0720390:intron | 20.0% |
| !! | ACAAAAAATTATGTGTATTC+CGG | + | chr5_1:16372002-16372021 | None:intergenic | 20.0% |
| !! | ACAAAAAATTATGTGTATTC+TGG | + | chr5_1:16372002-16372021 | None:intergenic | 20.0% |
| !!! | ACACATAATTTTTTGTAAAC+CGG | - | chr5_1:16372040-16372059 | Msa0720390:intron | 20.0% |
| !!! | AATTTTCATTATGTGTATTC+CGG | + | chr5_1:16372062-16372081 | None:intergenic | 20.0% |
| !!! | TTTTCATTAGTATTTTTTCC+GGG | + | chr5_1:16372086-16372105 | None:intergenic | 20.0% |
| !! | ATAAAAAAAATTTACACACG+TGG | - | chr5_1:16372688-16372707 | Msa0720390:intron | 20.0% |
| !!! | AAAGAGATATTTTTTTTAGG+GGG | - | chr5_1:16372790-16372809 | Msa0720390:intron | 20.0% |
| !! | GATGTAAAAATAATTCTCAT+TGG | - | chr5_1:16373049-16373068 | Msa0720390:intron | 20.0% |
| !!! | TTCTCATTGGTTAAAAATTA+TGG | - | chr5_1:16373062-16373081 | Msa0720390:intron | 20.0% |
| !! | CACAATAATAACATAAAAGT+TGG | - | chr5_1:16373162-16373181 | Msa0720390:intron | 20.0% |
| !! | ACGTTTCTTTGTTAAATATT+TGG | + | chr5_1:16373498-16373517 | None:intergenic | 20.0% |
| !!! | ATTCGGATTTTAAGAATTAT+GGG | + | chr5_1:16373627-16373646 | None:intergenic | 20.0% |
| !! | AAACATGGTTGAAATTTATA+TGG | + | chr5_1:16373855-16373874 | None:intergenic | 20.0% |
| !! | GTAAAAAACAAGAGATAAAT+TGG | - | chr5_1:16373933-16373952 | Msa0720390:intron | 20.0% |
| !!! | ATGTTTGTTACAATGTTAAT+GGG | + | chr5_1:16373989-16374008 | None:intergenic | 20.0% |
| !!! | AATGTTTGTTACAATGTTAA+TGG | + | chr5_1:16373990-16374009 | None:intergenic | 20.0% |
| !!! | AAACTAAGCAACAATTTTTA+AGG | - | chr5_1:16374463-16374482 | Msa0720390:intron | 20.0% |
| !!! | AACTAAGCAACAATTTTTAA+GGG | - | chr5_1:16374464-16374483 | Msa0720390:intron | 20.0% |
| !!! | TTTTTTTTTAGGGTTCTATT+AGG | + | chr5_1:16374490-16374509 | None:intergenic | 20.0% |
| !! | ATAGAACCCTAAAAAAAAAT+TGG | - | chr5_1:16374491-16374510 | Msa0720390:intron | 20.0% |
| !! | TAGAACCCTAAAAAAAAATT+GGG | - | chr5_1:16374492-16374511 | Msa0720390:intron | 20.0% |
| !!! | ATTTCGTACTTATTTTTTTG+GGG | - | chr5_1:16374521-16374540 | Msa0720390:intron | 20.0% |
| !!! | AGTTCTAAGATATTAAGTAA+AGG | + | chr5_1:16374623-16374642 | None:intergenic | 20.0% |
| !!! | TGAAATTACTCAATTTTGAT+AGG | - | chr5_1:16374814-16374833 | Msa0720390:intron | 20.0% |
| !! | ATAATGAATAATGTATTAGG+TGG | - | chr5_1:16374910-16374929 | Msa0720390:intron | 20.0% |
| !!! | AAGAAAACAATAAAAGGTAT+AGG | + | chr5_1:16375499-16375518 | None:intergenic | 20.0% |
| !! | TAAATACTAAAGGGATAATA+TGG | - | chr5_1:16375853-16375872 | Msa0720390:intron | 20.0% |
| !!! | TCTTTTGAGTTAATATTGTT+GGG | + | chr5_1:16375916-16375935 | None:intergenic | 20.0% |
| !!! | TTCTTTTGAGTTAATATTGT+TGG | + | chr5_1:16375917-16375936 | None:intergenic | 20.0% |
| !! | AGATATGAATTGATTATGTT+TGG | + | chr5_1:16375960-16375979 | None:intergenic | 20.0% |
| !! | AAAACAAAATGAAAAGCTTT+AGG | + | chr5_1:16376565-16376584 | None:intergenic | 20.0% |
| !!! | TTTTAAGATAGGAGAATCAT+CGG | + | chr5_1:16370360-16370379 | None:intergenic | 25.0% |
| ! | AATTTGAATTATATCCGTTG+AGG | + | chr5_1:16370486-16370505 | None:intergenic | 25.0% |
| ! | GTATTAGAGAAATAAGCATT+TGG | + | chr5_1:16370790-16370809 | None:intergenic | 25.0% |
| ! | TGAACACATAATAAGAAAAG+TGG | + | chr5_1:16370825-16370844 | None:intergenic | 25.0% |
| !! | TGCTTATAATTTAGTCTTCA+TGG | - | chr5_1:16370857-16370876 | Msa0720390:intron | 25.0% |
| ! | GAAAATATCTAGAAATTCCA+AGG | + | chr5_1:16370981-16371000 | None:intergenic | 25.0% |
| !! | GAAAAAAAAAGTGTGAACAT+TGG | - | chr5_1:16371081-16371100 | Msa0720390:intron | 25.0% |
| !!! | TATTGGCTTAATTACACTTT+TGG | - | chr5_1:16371358-16371377 | Msa0720390:intron | 25.0% |
| ! | TACACATAATGAAAATTTCC+CGG | - | chr5_1:16372065-16372084 | Msa0720390:intron | 25.0% |
| !! | ATTAGGCTTAATTACACTTT+TGG | + | chr5_1:16372847-16372866 | None:intergenic | 25.0% |
| ! | ATTAATAGTCGATATTATGC+AGG | + | chr5_1:16372882-16372901 | None:intergenic | 25.0% |
| !!! | ATAATTTTTTGTGTTCTCCT+TGG | - | chr5_1:16373009-16373028 | Msa0720390:intron | 25.0% |
| !! | GTTTAAGTTTGATTGCTAAT+TGG | - | chr5_1:16373319-16373338 | Msa0720390:intron | 25.0% |
| !!! | TTCGGATTTTAAGAATTATG+GGG | + | chr5_1:16373626-16373645 | None:intergenic | 25.0% |
| !!! | GATTCGGATTTTAAGAATTA+TGG | + | chr5_1:16373628-16373647 | None:intergenic | 25.0% |
| ! | AGACGTTAAAAAAAAACACT+TGG | + | chr5_1:16373708-16373727 | None:intergenic | 25.0% |
| !!! | AAATTTCAACCATGTTTTGA+AGG | - | chr5_1:16373858-16373877 | Msa0720390:intron | 25.0% |
| ! | AGATATTACCTTGAACAATA+TGG | - | chr5_1:16374070-16374089 | Msa0720390:CDS | 25.0% |
| ! | TTAAGACTCTTACCTATAAA+GGG | + | chr5_1:16374125-16374144 | None:intergenic | 25.0% |
| ! | ATTAAGACTCTTACCTATAA+AGG | + | chr5_1:16374126-16374145 | None:intergenic | 25.0% |
| !! | TTTTACATTGAATCTGATGA+TGG | - | chr5_1:16374145-16374164 | Msa0720390:CDS | 25.0% |
| ! | AGAACCCTAAAAAAAAATTG+GGG | - | chr5_1:16374493-16374512 | Msa0720390:intron | 25.0% |
| !!! | TCTTTATTTTCCATCATGTT+TGG | - | chr5_1:16375233-16375252 | Msa0720390:intron | 25.0% |
| !!! | GCTTCTCATAAAATTGATTT+TGG | + | chr5_1:16375287-16375306 | None:intergenic | 25.0% |
| ! | ATTAAACTTAGAGATAAGAG+AGG | - | chr5_1:16375566-16375585 | Msa0720390:intron | 25.0% |
| ! | TTAAACTTAGAGATAAGAGA+GGG | - | chr5_1:16375567-16375586 | Msa0720390:intron | 25.0% |
| ! | CAGTTCAATAAATGCATTAA+TGG | - | chr5_1:16376081-16376100 | Msa0720390:intron | 25.0% |
| ! | TTCAATAAATGCATTAATGG+AGG | - | chr5_1:16376084-16376103 | Msa0720390:intron | 25.0% |
| !!! | TCATTTTGTTTTTTGATCAG+TGG | - | chr5_1:16376573-16376592 | Msa0720390:CDS | 25.0% |
| ! | AGATTCAGAAAGATACTTAA+AGG | - | chr5_1:16376959-16376978 | Msa0720390:CDS | 25.0% |
| ! | AAGGAATGAATTCTTGATAT+TGG | + | chr5_1:16377200-16377219 | None:intergenic | 25.0% |
| ! | TTTATCAATATGAGAGGAAA+TGG | + | chr5_1:16377268-16377287 | None:intergenic | 25.0% |
| ! | TTTAAGATAGGAGAATCATC+GGG | + | chr5_1:16370359-16370378 | None:intergenic | 30.0% |
| AAAGTTGTCAACAAGTTCAA+TGG | - | chr5_1:16370745-16370764 | Msa0720390:intron | 30.0% | |
| ATATGTTCAAATAAGTCCAC+AGG | + | chr5_1:16370934-16370953 | None:intergenic | 30.0% | |
| TGGACTTATTTGAACATATG+TGG | - | chr5_1:16370935-16370954 | Msa0720390:CDS | 30.0% | |
| GGACTTATTTGAACATATGT+GGG | - | chr5_1:16370936-16370955 | Msa0720390:CDS | 30.0% | |
| AATCTGTGAATTATGTGTCA+AGG | - | chr5_1:16371016-16371035 | Msa0720390:intron | 30.0% | |
| ATAATCAATAGAGACAATGC+AGG | + | chr5_1:16371115-16371134 | None:intergenic | 30.0% | |
| TTTAGATATTGGACTGAGAA+AGG | - | chr5_1:16371161-16371180 | Msa0720390:intron | 30.0% | |
| GTGAAATCTTTCAACTTACA+GGG | + | chr5_1:16371278-16371297 | None:intergenic | 30.0% | |
| AGTGAAATCTTTCAACTTAC+AGG | + | chr5_1:16371279-16371298 | None:intergenic | 30.0% | |
| !! | TTCACTTTTGGTTGCAATTT+TGG | - | chr5_1:16371450-16371469 | Msa0720390:intron | 30.0% |
| TTAGTATATATGTCGAGCTT+AGG | + | chr5_1:16372140-16372159 | None:intergenic | 30.0% | |
| !! | TTCACTTTTGGTTGCAATTT+TGG | + | chr5_1:16371450-16371469 | None:intergenic | 30.0% |
| GCAGGCATACATAATAAATT+AGG | + | chr5_1:16372864-16372883 | None:intergenic | 30.0% | |
| TGCTTATAAAAAAAGACGGA+GGG | + | chr5_1:16372937-16372956 | None:intergenic | 30.0% | |
| TTGCTTATAAAAAAAGACGG+AGG | + | chr5_1:16372938-16372957 | None:intergenic | 30.0% | |
| AACCAATACTTAGTGATTTG+AGG | - | chr5_1:16372985-16373004 | Msa0720390:intron | 30.0% | |
| TACCTCAAATCACTAAGTAT+TGG | + | chr5_1:16372990-16373009 | None:intergenic | 30.0% | |
| TTTCCATGAAACTTATTCCA+AGG | + | chr5_1:16373029-16373048 | None:intergenic | 30.0% | |
| !!! | TTGCTTATATTTTAGAACGG+AGG | - | chr5_1:16373227-16373246 | Msa0720390:intron | 30.0% |
| !!! | TGCTTATATTTTAGAACGGA+GGG | - | chr5_1:16373228-16373247 | Msa0720390:intron | 30.0% |
| TAATTCCTTGCTTCTGATAA+TGG | - | chr5_1:16373286-16373305 | Msa0720390:intron | 30.0% | |
| TTTATCCATTATCAGAAGCA+AGG | + | chr5_1:16373294-16373313 | None:intergenic | 30.0% | |
| !! | TTCAAGCATTTTGAGAAAAG+TGG | - | chr5_1:16373350-16373369 | Msa0720390:intron | 30.0% |
| CTAATGAACTCCTAGATAAA+TGG | - | chr5_1:16373522-16373541 | Msa0720390:CDS | 30.0% | |
| !!! | TGGTTTTGATCCATTTATCT+AGG | + | chr5_1:16373535-16373554 | None:intergenic | 30.0% |
| ATCAAAACCAAAGATTTACC+TGG | - | chr5_1:16373545-16373564 | Msa0720390:intron | 30.0% | |
| TTCTTAAAATCCGAATCCAT+CGG | - | chr5_1:16373631-16373650 | Msa0720390:intron | 30.0% | |
| TCACATGAACTTCTTAAACT+TGG | + | chr5_1:16373790-16373809 | None:intergenic | 30.0% | |
| ! | ACTTCTTTTCCTTCAAAACA+TGG | + | chr5_1:16373870-16373889 | None:intergenic | 30.0% |
| !!! | TTGTTTTTTACTGCATACAC+TGG | + | chr5_1:16373924-16373943 | None:intergenic | 30.0% |
| TAATATCTTGTCTCCAATCT+GGG | + | chr5_1:16374058-16374077 | None:intergenic | 30.0% | |
| TATTACCTTGAACAATATGG+TGG | - | chr5_1:16374073-16374092 | Msa0720390:CDS | 30.0% | |
| ATTATTAGGACCCAAATTGT+AGG | + | chr5_1:16374213-16374232 | None:intergenic | 30.0% | |
| CAATTTGGGTCCTAATAATA+AGG | - | chr5_1:16374214-16374233 | Msa0720390:intron | 30.0% | |
| ! | TCTTTTATCTTGTGTCCTTA+GGG | + | chr5_1:16374395-16374414 | None:intergenic | 30.0% |
| ! | ATCTTTTATCTTGTGTCCTT+AGG | + | chr5_1:16374396-16374415 | None:intergenic | 30.0% |
| !!! | TAGGCCCCAATTTTTTTTTA+GGG | + | chr5_1:16374500-16374519 | None:intergenic | 30.0% |
| !!! | TTAGGCCCCAATTTTTTTTT+AGG | + | chr5_1:16374501-16374520 | None:intergenic | 30.0% |
| AGTAAATGATCTGAGTCATA+GGG | + | chr5_1:16374586-16374605 | None:intergenic | 30.0% | |
| CATTTCATGCAACAAAATTC+AGG | + | chr5_1:16374744-16374763 | None:intergenic | 30.0% | |
| TCTATATATTAGGTGGTACA+TGG | - | chr5_1:16374993-16375012 | Msa0720390:intron | 30.0% | |
| TACATGGAATCAGAACTAAA+AGG | - | chr5_1:16375009-16375028 | Msa0720390:intron | 30.0% | |
| ACATGGAATCAGAACTAAAA+GGG | - | chr5_1:16375010-16375029 | Msa0720390:intron | 30.0% | |
| TAAAAAAAGCCATACCAAAC+AGG | + | chr5_1:16375178-16375197 | None:intergenic | 30.0% | |
| GATGGAAAATAAAGAAACCA+GGG | + | chr5_1:16375228-16375247 | None:intergenic | 30.0% | |
| TGATGGAAAATAAAGAAACC+AGG | + | chr5_1:16375229-16375248 | None:intergenic | 30.0% | |
| GAAAAGAAAACCAAACATGA+TGG | + | chr5_1:16375246-16375265 | None:intergenic | 30.0% | |
| ! | AAGACAAATTGAAATGGGTT+GGG | + | chr5_1:16375455-16375474 | None:intergenic | 30.0% |
| GATGGAAGACAAATTGAAAT+GGG | + | chr5_1:16375460-16375479 | None:intergenic | 30.0% | |
| AGATGGAAGACAAATTGAAA+TGG | + | chr5_1:16375461-16375480 | None:intergenic | 30.0% | |
| GCTGGTAAGAAAACAATAAA+AGG | + | chr5_1:16375505-16375524 | None:intergenic | 30.0% | |
| TAAACTTAGAGATAAGAGAG+GGG | - | chr5_1:16375568-16375587 | Msa0720390:intron | 30.0% | |
| !! | GAGTTTGAGAGAATTGATTT+TGG | + | chr5_1:16375996-16376015 | None:intergenic | 30.0% |
| GTTAGTAGTTACCATATATC+AGG | - | chr5_1:16376190-16376209 | Msa0720390:intron | 30.0% | |
| TACTAGATATGCCTGATATA+TGG | + | chr5_1:16376204-16376223 | None:intergenic | 30.0% | |
| ATAGAGATACAAGTCTCAAA+AGG | + | chr5_1:16376469-16376488 | None:intergenic | 30.0% | |
| CAAATCATAAATTTAACCGC+CGG | - | chr5_1:16376662-16376681 | Msa0720390:intron | 30.0% | |
| ! | TACTTCTTTTGACCAATATC+CGG | + | chr5_1:16376684-16376703 | None:intergenic | 30.0% |
| CATATTCAGGATCTAAATGT+TGG | + | chr5_1:16377076-16377095 | None:intergenic | 30.0% | |
| ATCCTGAATATGTTATTGTC+AGG | - | chr5_1:16377084-16377103 | Msa0720390:intron | 30.0% | |
| TATCAAGAATTCATTCCTTG+CGG | - | chr5_1:16377201-16377220 | Msa0720390:CDS | 30.0% | |
| TGCTTCATAGTAAAAACTCT+TGG | + | chr5_1:16377230-16377249 | None:intergenic | 30.0% | |
| GAGAACTTTATCAATATGAG+AGG | + | chr5_1:16377274-16377293 | None:intergenic | 30.0% | |
| GGAAAATCTTAACAAGCTTC+AGG | - | chr5_1:16370247-16370266 | Msa0720390:CDS | 35.0% | |
| AAAGCAACTTCAAATCCGAT+TGG | + | chr5_1:16370293-16370312 | None:intergenic | 35.0% | |
| TGATAACAGAATACCAAGAG+AGG | - | chr5_1:16370549-16370568 | Msa0720390:intron | 35.0% | |
| AAACTGTGTAGCAATGTTGT+TGG | + | chr5_1:16370589-16370608 | None:intergenic | 35.0% | |
| AACATTGCTACACAGTTTAG+AGG | - | chr5_1:16370591-16370610 | Msa0720390:intron | 35.0% | |
| ACATTGCTACACAGTTTAGA+GGG | - | chr5_1:16370592-16370611 | Msa0720390:intron | 35.0% | |
| TTTAGAGGGAATGCAGAATT+TGG | - | chr5_1:16370606-16370625 | Msa0720390:intron | 35.0% | |
| !! | GACTGAGAAAGGTATTTGTT+GGG | - | chr5_1:16371172-16371191 | Msa0720390:intron | 35.0% |
| GGTTCAAGATATAGATGACA+CGG | - | chr5_1:16371208-16371227 | Msa0720390:intron | 35.0% | |
| ! | TCGCAACTTTTGGATACTTA+GGG | + | chr5_1:16372819-16372838 | None:intergenic | 35.0% |
| ! | ATCGCAACTTTTGGATACTT+AGG | + | chr5_1:16372818-16372837 | None:intergenic | 35.0% |
| ! | GTATCCAAAAGTTGCGATTT+TGG | - | chr5_1:16371390-16371409 | Msa0720390:intron | 35.0% |
| CAACCAAAAGTGAACTTAAG+GGG | + | chr5_1:16372762-16372781 | None:intergenic | 35.0% | |
| GCAACCAAAAGTGAACTTAA+GGG | + | chr5_1:16372761-16372780 | None:intergenic | 35.0% | |
| TGCAACCAAAAGTGAACTTA+AGG | + | chr5_1:16372760-16372779 | None:intergenic | 35.0% | |
| TGCAACCAAAAGTGAACTTA+AGG | - | chr5_1:16372760-16372779 | Msa0720390:intron | 35.0% | |
| GCAACCAAAAGTGAACTTAA+GGG | - | chr5_1:16372761-16372780 | Msa0720390:intron | 35.0% | |
| CAACCAAAAGTGAACTTAAG+GGG | - | chr5_1:16372762-16372781 | Msa0720390:intron | 35.0% | |
| ! | GTATCCAAAAGTTGCGATTT+TGG | + | chr5_1:16371390-16371409 | None:intergenic | 35.0% |
| ! | ATCGCAACTTTTGGATACTT+AGG | - | chr5_1:16372818-16372837 | Msa0720390:intron | 35.0% |
| ! | TCGCAACTTTTGGATACTTA+GGG | - | chr5_1:16372819-16372838 | Msa0720390:intron | 35.0% |
| TCTCCTTGGAATAAGTTTCA+TGG | - | chr5_1:16373023-16373042 | Msa0720390:intron | 35.0% | |
| TCTATATAGATCGAACATGC+CGG | + | chr5_1:16373417-16373436 | None:intergenic | 35.0% | |
| ATATTTGGCCGAGAAATTCT+TGG | + | chr5_1:16373483-16373502 | None:intergenic | 35.0% | |
| !! | ACGTAAACTTTGAGATCAGT+AGG | + | chr5_1:16373593-16373612 | None:intergenic | 35.0% |
| ! | AAGTTTTTCTCACGTCTGAA+TGG | - | chr5_1:16373676-16373695 | Msa0720390:intron | 35.0% |
| ! | AGTTTTTCTCACGTCTGAAT+GGG | - | chr5_1:16373677-16373696 | Msa0720390:intron | 35.0% |
| !! | AGTTTTCAAGAAGTTGTTGC+AGG | - | chr5_1:16373752-16373771 | Msa0720390:intron | 35.0% |
| !! | GTTTTCAAGAAGTTGTTGCA+GGG | - | chr5_1:16373753-16373772 | Msa0720390:intron | 35.0% |
| CATTGTAACAAACATTCTGC+AGG | - | chr5_1:16373994-16374013 | Msa0720390:intron | 35.0% | |
| GTAATATCTTGTCTCCAATC+TGG | + | chr5_1:16374059-16374078 | None:intergenic | 35.0% | |
| TTTCACCACCATATTGTTCA+AGG | + | chr5_1:16374081-16374100 | None:intergenic | 35.0% | |
| ! | ATGGTGGTGAAAATGATGTT+TGG | - | chr5_1:16374089-16374108 | Msa0720390:CDS | 35.0% |
| GGTGAAAATGATGTTTGGAT+TGG | - | chr5_1:16374094-16374113 | Msa0720390:CDS | 35.0% | |
| !!! | CAGGGAAGTTTTTGAGATTT+TGG | - | chr5_1:16374173-16374192 | Msa0720390:CDS | 35.0% |
| !!! | GGAAGTTTTTGAGATTTTGG+TGG | - | chr5_1:16374176-16374195 | Msa0720390:CDS | 35.0% |
| !!! | TTTTGAGATTTTGGTGGCTT+AGG | - | chr5_1:16374182-16374201 | Msa0720390:CDS | 35.0% |
| !! | TTTGAGATTTTGGTGGCTTA+GGG | - | chr5_1:16374183-16374202 | Msa0720390:CDS | 35.0% |
| TTAGGGTGAACCTACAATTT+GGG | - | chr5_1:16374200-16374219 | Msa0720390:CDS | 35.0% | |
| ATTTCTTAACATGTGCCCTT+GGG | + | chr5_1:16374257-16374276 | None:intergenic | 35.0% | |
| AATTTCTTAACATGTGCCCT+TGG | + | chr5_1:16374258-16374277 | None:intergenic | 35.0% | |
| !!! | TACTTATTTTTTTGGGGCCA+AGG | - | chr5_1:16374527-16374546 | Msa0720390:intron | 35.0% |
| !!! | ACTTATTTTTTTGGGGCCAA+GGG | - | chr5_1:16374528-16374547 | Msa0720390:intron | 35.0% |
| CAGTAAATGATCTGAGTCAT+AGG | + | chr5_1:16374587-16374606 | None:intergenic | 35.0% | |
| TAAGCATCATTGTTCACGTA+CGG | + | chr5_1:16374843-16374862 | None:intergenic | 35.0% | |
| GAATCAGAACTAAAAGGGTT+TGG | - | chr5_1:16375015-16375034 | Msa0720390:intron | 35.0% | |
| GATTGCTTATTATGTAGCAG+CGG | - | chr5_1:16375059-16375078 | Msa0720390:intron | 35.0% | |
| AAATAAAGAAACCAGGGTGA+AGG | + | chr5_1:16375222-16375241 | None:intergenic | 35.0% | |
| GAAGACAAATTGAAATGGGT+TGG | + | chr5_1:16375456-16375475 | None:intergenic | 35.0% | |
| ! | ACGAATTTGTTTGATTACGC+TGG | - | chr5_1:16375627-16375646 | Msa0720390:intron | 35.0% |
| TTAGAGAAGACGATGACAAT+GGG | - | chr5_1:16375754-16375773 | Msa0720390:intron | 35.0% | |
| !! | TGACAATGGGTTAAAGGATA+AGG | - | chr5_1:16375767-16375786 | Msa0720390:intron | 35.0% |
| TTAGTGTGTGTTTGGTATGA+CGG | + | chr5_1:16376045-16376064 | None:intergenic | 35.0% | |
| AAGAACTCTTAGTGTGTGTT+TGG | + | chr5_1:16376053-16376072 | None:intergenic | 35.0% | |
| GTTAAACAAGAACAAGAGAG+AGG | - | chr5_1:16376333-16376352 | Msa0720390:CDS | 35.0% | |
| GATTCTGATGCCTAAACATT+TGG | + | chr5_1:16376405-16376424 | None:intergenic | 35.0% | |
| AATGTTTAGGCATCAGAATC+AGG | - | chr5_1:16376405-16376424 | Msa0720390:intron | 35.0% | |
| !! | CTTCGTTTTAACACAGCTAA+CGG | - | chr5_1:16376511-16376530 | Msa0720390:intron | 35.0% |
| ! | TTTTTGATCAGTGGCAAAAG+TGG | - | chr5_1:16376582-16376601 | Msa0720390:CDS | 35.0% |
| AAGTAATTCAGCTCCTCTTT+CGG | + | chr5_1:16376639-16376658 | None:intergenic | 35.0% | |
| TAAATTTAACCGCCGGATAT+TGG | - | chr5_1:16376669-16376688 | Msa0720390:intron | 35.0% | |
| !! | CAAGTAGTTTCTAGTACTCA+GGG | + | chr5_1:16376715-16376734 | None:intergenic | 35.0% |
| !! | TCAAGTAGTTTCTAGTACTC+AGG | + | chr5_1:16376716-16376735 | None:intergenic | 35.0% |
| AGTCACAAAAAGAATCTGCA+CGG | - | chr5_1:16376736-16376755 | Msa0720390:intron | 35.0% | |
| !! | CCTCGTTGATTTGGTAATTA+CGG | + | chr5_1:16376766-16376785 | None:intergenic | 35.0% |
| ! | CATTACTAACCTCGTTGATT+TGG | + | chr5_1:16376775-16376794 | None:intergenic | 35.0% |
| ! | TATGCTTAGAAGTGCATGTT+TGG | - | chr5_1:16376807-16376826 | Msa0720390:CDS | 35.0% |
| !!! | ATAGTTTGCTAGCGTAGTTT+TGG | - | chr5_1:16376853-16376872 | Msa0720390:CDS | 35.0% |
| GTTTGTAATTACAGCGAGTT+TGG | + | chr5_1:16376931-16376950 | None:intergenic | 35.0% | |
| TGCCTGACAATAACATATTC+AGG | + | chr5_1:16377089-16377108 | None:intergenic | 35.0% | |
| ACATGCTAGTATCAATACAC+CGG | - | chr5_1:16377108-16377127 | Msa0720390:intron | 35.0% | |
| AATGCAAGAACTTGTGCAAT+TGG | - | chr5_1:16377144-16377163 | Msa0720390:intron | 35.0% | |
| ! | CAATTGGTGCTTCAAAATTC+TGG | - | chr5_1:16377160-16377179 | Msa0720390:intron | 35.0% |
| GTTTGACAATGTAGCCTCAA+CGG | - | chr5_1:16370469-16370488 | Msa0720390:intron | 40.0% | |
| AGGGAATGCAGAATTTGGAT+TGG | - | chr5_1:16370611-16370630 | Msa0720390:intron | 40.0% | |
| TGAAGTTACAGTCCCAAGAT+GGG | - | chr5_1:16370644-16370663 | Msa0720390:intron | 40.0% | |
| GAACAAGAATGACCCATCTT+GGG | + | chr5_1:16370659-16370678 | None:intergenic | 40.0% | |
| AGAACAAGAATGACCCATCT+TGG | + | chr5_1:16370660-16370679 | None:intergenic | 40.0% | |
| TTGCATATGAGCAAAAGCTG+TGG | + | chr5_1:16370692-16370711 | None:intergenic | 40.0% | |
| !!! | GTGGAGAGCATTTTCATCAT+TGG | + | chr5_1:16370716-16370735 | None:intergenic | 40.0% |
| TGAAAATGCTCTCCACTACT+TGG | - | chr5_1:16370720-16370739 | Msa0720390:intron | 40.0% | |
| TGACAACTTTGTCCAAGTAG+TGG | + | chr5_1:16370735-16370754 | None:intergenic | 40.0% | |
| GTTGTCAACAAGTTCAATGG+AGG | - | chr5_1:16370748-16370767 | Msa0720390:intron | 40.0% | |
| AGTTCCAAATGTGTTTCCTG+TGG | - | chr5_1:16370915-16370934 | Msa0720390:CDS | 40.0% | |
| AAGTCCACAGGAAACACATT+TGG | + | chr5_1:16370922-16370941 | None:intergenic | 40.0% | |
| ! | ATTTGAACATATGTGGGCTG+TGG | - | chr5_1:16370942-16370961 | Msa0720390:CDS | 40.0% |
| !! | GGACTGAGAAAGGTATTTGT+TGG | - | chr5_1:16371171-16371190 | Msa0720390:intron | 40.0% |
| TTGTTGGGCAAGAAATTCAG+AGG | - | chr5_1:16371187-16371206 | Msa0720390:intron | 40.0% | |
| AGATATAGATGACACGGCAA+TGG | - | chr5_1:16371214-16371233 | Msa0720390:intron | 40.0% | |
| GATATAGATGACACGGCAAT+GGG | - | chr5_1:16371215-16371234 | Msa0720390:intron | 40.0% | |
| CAATGGGATTTAGACTGCTT+AGG | - | chr5_1:16371231-16371250 | Msa0720390:intron | 40.0% | |
| ! | TTTAGACTGCTTAGGTTGCA+TGG | - | chr5_1:16371239-16371258 | Msa0720390:intron | 40.0% |
| TCAACTTACAGGGTGAAACT+TGG | + | chr5_1:16371268-16371287 | None:intergenic | 40.0% | |
| ! | CAACTTTTGGATACTTAGGG+GGG | + | chr5_1:16372822-16372841 | None:intergenic | 40.0% |
| ! | GCAACTTTTGGATACTTAGG+GGG | + | chr5_1:16372821-16372840 | None:intergenic | 40.0% |
| ! | CGCAACTTTTGGATACTTAG+GGG | + | chr5_1:16372820-16372839 | None:intergenic | 40.0% |
| ! | TCTGTTGACTGGGTCAAAAT+TGG | - | chr5_1:16372721-16372740 | Msa0720390:intron | 40.0% |
| ! | CGCAACTTTTGGATACTTAG+GGG | - | chr5_1:16372820-16372839 | Msa0720390:intron | 40.0% |
| ! | GCAACTTTTGGATACTTAGG+GGG | - | chr5_1:16372821-16372840 | Msa0720390:intron | 40.0% |
| AACAGCTTGATTTAGCTGTC+CGG | + | chr5_1:16373393-16373412 | None:intergenic | 40.0% | |
| CAGCTAAATCAAGCTGTTAC+CGG | - | chr5_1:16373395-16373414 | Msa0720390:intron | 40.0% | |
| TCAAGAAGAGAAGATTCTCG+AGG | - | chr5_1:16373454-16373473 | Msa0720390:CDS | 40.0% | |
| ! | ATGTGTACTTCCGATGGATT+CGG | + | chr5_1:16373644-16373663 | None:intergenic | 40.0% |
| GTCTGCATGTATACTTCTGA+TGG | - | chr5_1:16373724-16373743 | Msa0720390:intron | 40.0% | |
| TGCATGTATACTTCTGATGG+AGG | - | chr5_1:16373727-16373746 | Msa0720390:intron | 40.0% | |
| TGTAACAAACATTCTGCAGG+TGG | - | chr5_1:16373997-16374016 | Msa0720390:intron | 40.0% | |
| GTAACAAACATTCTGCAGGT+GGG | - | chr5_1:16373998-16374017 | Msa0720390:intron | 40.0% | |
| CTTAGGGTGAACCTACAATT+TGG | - | chr5_1:16374199-16374218 | Msa0720390:CDS | 40.0% | |
| TTTCTTAACATGTGCCCTTG+GGG | + | chr5_1:16374256-16374275 | None:intergenic | 40.0% | |
| !! | ATTCCTTAACTTGTGCCCTA+AGG | - | chr5_1:16374377-16374396 | Msa0720390:intron | 40.0% |
| AATCTAACTTTGCAAGCTCG+AGG | + | chr5_1:16374866-16374885 | None:intergenic | 40.0% | |
| AACTAAGTGCCTGTTTGGTA+TGG | - | chr5_1:16375166-16375185 | Msa0720390:intron | 40.0% | |
| AAGCTACAAATCTCAGCTTC+TGG | - | chr5_1:16375303-16375322 | Msa0720390:intron | 40.0% | |
| AGCTACAAATCTCAGCTTCT+GGG | - | chr5_1:16375304-16375323 | Msa0720390:intron | 40.0% | |
| GTGAGGGTAAAGAAGGAAAA+AGG | + | chr5_1:16375381-16375400 | None:intergenic | 40.0% | |
| ! | TCTTTTCCCTCACATCTGTT+CGG | - | chr5_1:16375412-16375431 | Msa0720390:intron | 40.0% |
| GGCATTAAGAAATGCAGAGA+TGG | + | chr5_1:16375478-16375497 | None:intergenic | 40.0% | |
| !! | CCACAATTTCTGAAATCAGC+TGG | + | chr5_1:16375523-16375542 | None:intergenic | 40.0% |
| ! | CCAGCTGATTTCAGAAATTG+TGG | - | chr5_1:16375520-16375539 | Msa0720390:intron | 40.0% |
| TTGTTTGATTACGCTGGAAG+TGG | - | chr5_1:16375633-16375652 | Msa0720390:intron | 40.0% | |
| GTTAGAGAAGACGATGACAA+TGG | - | chr5_1:16375753-16375772 | Msa0720390:intron | 40.0% | |
| !! | AGACGATGACAATGGGTTAA+AGG | - | chr5_1:16375761-16375780 | Msa0720390:intron | 40.0% |
| !! | ATGCATGCGTAATTTGTTGC+AGG | - | chr5_1:16376308-16376327 | Msa0720390:CDS | 40.0% |
| !! | TGCATGCGTAATTTGTTGCA+GGG | - | chr5_1:16376309-16376328 | Msa0720390:CDS | 40.0% |
| AAGAGAGAGGAGAAACTCAT+GGG | - | chr5_1:16376346-16376365 | Msa0720390:CDS | 40.0% | |
| TCTGATGCCTAAACATTTGG+TGG | + | chr5_1:16376402-16376421 | None:intergenic | 40.0% | |
| TAACACAGCTAACGGCAAAT+AGG | - | chr5_1:16376519-16376538 | Msa0720390:intron | 40.0% | |
| ! | TTCTTTTGACCAATATCCGG+CGG | + | chr5_1:16376681-16376700 | None:intergenic | 40.0% |
| GTCACAAAAAGAATCTGCAC+GGG | - | chr5_1:16376737-16376756 | Msa0720390:intron | 40.0% | |
| !! | CGTTGATTTGGTAATTACGG+AGG | + | chr5_1:16376763-16376782 | None:intergenic | 40.0% |
| CCGTAATTACCAAATCAACG+AGG | - | chr5_1:16376763-16376782 | Msa0720390:intron | 40.0% | |
| ! | TGACTCTGAAAACTGATCGT+CGG | + | chr5_1:16376834-16376853 | None:intergenic | 40.0% |
| CAGCGAGTTTGGCAAAATTA+TGG | + | chr5_1:16376920-16376939 | None:intergenic | 40.0% | |
| AATGCATGGCTATCATGACT+TGG | - | chr5_1:16377037-16377056 | Msa0720390:intron | 40.0% | |
| TGCATTTCTGACTCTATCTC+CGG | + | chr5_1:16377130-16377149 | None:intergenic | 40.0% | |
| ! | GTGCTTCAAAATTCTGGAGA+TGG | - | chr5_1:16377166-16377185 | Msa0720390:CDS | 40.0% |
| AATGCTGAGCACATGCCAAT+CGG | - | chr5_1:16370275-16370294 | Msa0720390:CDS | 45.0% | |
| CTGAAGTTACAGTCCCAAGA+TGG | - | chr5_1:16370643-16370662 | Msa0720390:intron | 45.0% | |
| TGAGCAAAAGCTGTGGATGA+AGG | + | chr5_1:16370685-16370704 | None:intergenic | 45.0% | |
| GTCAACAAGTTCAATGGAGG+AGG | - | chr5_1:16370751-16370770 | Msa0720390:intron | 45.0% | |
| ACTTACAGGGTGAAACTTGG+TGG | + | chr5_1:16371265-16371284 | None:intergenic | 45.0% | |
| ! | TGGCCCCTTAAGTTCACTTT+TGG | - | chr5_1:16371438-16371457 | Msa0720390:intron | 45.0% |
| ACTGGGTCAAAATTGGGCTA+GGG | + | chr5_1:16371478-16371497 | None:intergenic | 45.0% | |
| !! | GCGTTGACTGGGTCAAAATT+GGG | + | chr5_1:16371484-16371503 | None:intergenic | 45.0% |
| !! | AGCGTTGACTGGGTCAAAAT+TGG | + | chr5_1:16371485-16371504 | None:intergenic | 45.0% |
| TGACTGGGTCAAAATTGGCT+TGG | - | chr5_1:16372726-16372745 | Msa0720390:intron | 45.0% | |
| ! | GACTGGGTCAAAATTGGCTT+GGG | - | chr5_1:16372727-16372746 | Msa0720390:intron | 45.0% |
| !! | ACTGGGTCAAAATTGGCTTG+GGG | - | chr5_1:16372728-16372747 | Msa0720390:intron | 45.0% |
| ! | TGGCCCCTTAAGTTCACTTT+TGG | + | chr5_1:16371438-16371457 | None:intergenic | 45.0% |
| ! | GGCGAATTCTTTTGCTTTGC+CGG | - | chr5_1:16373371-16373390 | Msa0720390:intron | 45.0% |
| CGAGGATGCCAAGAATTTCT+CGG | - | chr5_1:16373472-16373491 | Msa0720390:CDS | 45.0% | |
| AACCAAAGATTTACCTGGCG+AGG | - | chr5_1:16373550-16373569 | Msa0720390:intron | 45.0% | |
| AAATTAGAACTCACCTCGCC+AGG | + | chr5_1:16373566-16373585 | None:intergenic | 45.0% | |
| GTCTGAATGTGTACTTCCGA+TGG | + | chr5_1:16373650-16373669 | None:intergenic | 45.0% | |
| ! | GTTATGCTTTGGATGTGCCA+TGG | - | chr5_1:16374020-16374039 | Msa0720390:CDS | 45.0% |
| ! | GTATGCTAGCTTACCCAGAT+TGG | - | chr5_1:16374042-16374061 | Msa0720390:CDS | 45.0% |
| ! | GGATTGGCAAGACCCTTTAT+AGG | - | chr5_1:16374110-16374129 | Msa0720390:CDS | 45.0% |
| !! | AATCTGATGATGGCTCAGCA+GGG | - | chr5_1:16374155-16374174 | Msa0720390:CDS | 45.0% |
| TGTCCTTAGGGCACAAGTTA+AGG | + | chr5_1:16374383-16374402 | None:intergenic | 45.0% | |
| !!! | TATTTTTTTGGGGCCAAGGG+CGG | - | chr5_1:16374531-16374550 | Msa0720390:intron | 45.0% |
| CTAGCATATTTGATCCCGAG+AGG | - | chr5_1:16375082-16375101 | Msa0720390:intron | 45.0% | |
| ! | AAGTCTCTCTAGAGACCTCT+CGG | + | chr5_1:16375100-16375119 | None:intergenic | 45.0% |
| ! | GTCTCTAGAGAGACTTGCAT+GGG | - | chr5_1:16375104-16375123 | Msa0720390:intron | 45.0% |
| GACGAAACTAAGTGCCTGTT+TGG | - | chr5_1:16375161-16375180 | Msa0720390:intron | 45.0% | |
| ! | TTTTAGCCTCAAACGCCGTT+TGG | - | chr5_1:16375193-16375212 | Msa0720390:intron | 45.0% |
| TACAAATCTCAGCTTCTGGG+TGG | - | chr5_1:16375307-16375326 | Msa0720390:intron | 45.0% | |
| ACAAATCTCAGCTTCTGGGT+GGG | - | chr5_1:16375308-16375327 | Msa0720390:intron | 45.0% | |
| AGATGTGAGGGAAAAGAGAG+AGG | + | chr5_1:16375409-16375428 | None:intergenic | 45.0% | |
| GGAAAACCGAACAGATGTGA+GGG | + | chr5_1:16375421-16375440 | None:intergenic | 45.0% | |
| TGGAAAACCGAACAGATGTG+AGG | + | chr5_1:16375422-16375441 | None:intergenic | 45.0% | |
| !! | ATTGAAATGGGTTGGGCAAG+AGG | + | chr5_1:16375448-16375467 | None:intergenic | 45.0% |
| GGACATTTCAGTTCTTGCCT+TGG | - | chr5_1:16375654-16375673 | Msa0720390:intron | 45.0% | |
| ! | TTCTTGCCTTGGTGCATCAA+TGG | - | chr5_1:16375665-16375684 | Msa0720390:intron | 45.0% |
| TGTACTCCATTGATGCACCA+AGG | + | chr5_1:16375674-16375693 | None:intergenic | 45.0% | |
| TTGTTGTGACTCCTGTGAGT+GGG | - | chr5_1:16375714-16375733 | Msa0720390:intron | 45.0% | |
| ! | AGTGGGGGAGTAGATTTTCT+TGG | - | chr5_1:16375731-16375750 | Msa0720390:intron | 45.0% |
| !! | GCATGCGTAATTTGTTGCAG+GGG | - | chr5_1:16376310-16376329 | Msa0720390:CDS | 45.0% |
| !! | CATGCGTAATTTGTTGCAGG+GGG | - | chr5_1:16376311-16376330 | Msa0720390:CDS | 45.0% |
| CAAGAGAGAGGAGAAACTCA+TGG | - | chr5_1:16376345-16376364 | Msa0720390:CDS | 45.0% | |
| ACCTTGGCCACCAAATGTTT+AGG | - | chr5_1:16376392-16376411 | Msa0720390:intron | 45.0% | |
| TTCTCAAGCTGGCACTATGA+AGG | - | chr5_1:16376605-16376624 | Msa0720390:CDS | 45.0% | |
| GAAGGAAACAGATCCGAAAG+AGG | - | chr5_1:16376623-16376642 | Msa0720390:CDS | 45.0% | |
| CAAGAATTCATTCCTTGCGG+TGG | - | chr5_1:16377204-16377223 | Msa0720390:CDS | 45.0% | |
| !!! | AATTTAAATTTTTTAGATAT+TGG | - | chr5_1:16371150-16371169 | Msa0720390:intron | 5.0% |
| !! | TAATAAATAAATAAAAATTC+TGG | - | chr5_1:16371553-16371572 | Msa0720390:intron | 5.0% |
| !! | AAAAAAATATTAAAAAATTC+TGG | - | chr5_1:16371604-16371623 | Msa0720390:intron | 5.0% |
| !! | AAAAAATATTAAAAAAATTC+TGG | - | chr5_1:16371637-16371656 | Msa0720390:intron | 5.0% |
| !! | AAAAAAATATTAAAAAATTC+TGG | - | chr5_1:16371604-16371623 | Msa0720390:intron | 5.0% |
| !!! | AAAAATTTTAATTTAAATTC+TGG | + | chr5_1:16372319-16372338 | None:intergenic | 5.0% |
| !! | AAAAAAATATTATAAAATTC+TGG | + | chr5_1:16372520-16372539 | None:intergenic | 5.0% |
| CGAGCTACATTGAGAAGCGA+AGG | + | chr5_1:16370317-16370336 | None:intergenic | 50.0% | |
| ! | GGGGCCAAAATCGCAACTTT+TGG | + | chr5_1:16372809-16372828 | None:intergenic | 50.0% |
| ! | TGGGTCAAAATTGGGCTAGG+GGG | + | chr5_1:16371476-16371495 | None:intergenic | 50.0% |
| ! | CTGGGTCAAAATTGGGCTAG+GGG | + | chr5_1:16371477-16371496 | None:intergenic | 50.0% |
| GACTGGGTCAAAATTGGGCT+AGG | + | chr5_1:16371479-16371498 | None:intergenic | 50.0% | |
| !! | CTGGGTCAAAATTGGCTTGG+GGG | - | chr5_1:16372729-16372748 | Msa0720390:intron | 50.0% |
| !! | TGGGTCAAAATTGGCTTGGG+GGG | - | chr5_1:16372730-16372749 | Msa0720390:intron | 50.0% |
| ! | GGGGCCAAAATCGCAACTTT+TGG | - | chr5_1:16372809-16372828 | Msa0720390:intron | 50.0% |
| CACCTCGCCAGGTAAATCTT+TGG | + | chr5_1:16373555-16373574 | None:intergenic | 50.0% | |
| !! | TCTGCAGGTGGGTTATGCTT+TGG | - | chr5_1:16374009-16374028 | Msa0720390:CDS | 50.0% |
| CTGGGTAAGCTAGCATACCA+TGG | + | chr5_1:16374040-16374059 | None:intergenic | 50.0% | |
| !! | GAATCTGATGATGGCTCAGC+AGG | - | chr5_1:16374154-16374173 | Msa0720390:CDS | 50.0% |
| ! | ATAGGGTCGTATCTGAGGCA+GGG | + | chr5_1:16374569-16374588 | None:intergenic | 50.0% |
| GAGTCATAGGGTCGTATCTG+AGG | + | chr5_1:16374574-16374593 | None:intergenic | 50.0% | |
| ! | AGTCTCTCTAGAGACCTCTC+GGG | + | chr5_1:16375099-16375118 | None:intergenic | 50.0% |
| ! | GGTCTCTAGAGAGACTTGCA+TGG | - | chr5_1:16375103-16375122 | Msa0720390:intron | 50.0% |
| ! | AAAGAGAGAGGTGTGGGTGA+GGG | + | chr5_1:16375397-16375416 | None:intergenic | 50.0% |
| ! | AAAAGAGAGAGGTGTGGGTG+AGG | + | chr5_1:16375398-16375417 | None:intergenic | 50.0% |
| ! | GAGGGAAAAGAGAGAGGTGT+GGG | + | chr5_1:16375403-16375422 | None:intergenic | 50.0% |
| TGAGGGAAAAGAGAGAGGTG+TGG | + | chr5_1:16375404-16375423 | None:intergenic | 50.0% | |
| GTTGTTGTGACTCCTGTGAG+TGG | - | chr5_1:16375713-16375732 | Msa0720390:intron | 50.0% | |
| TGTTGTGACTCCTGTGAGTG+GGG | - | chr5_1:16375715-16375734 | Msa0720390:intron | 50.0% | |
| AAATCTACTCCCCCACTCAC+AGG | + | chr5_1:16375728-16375747 | None:intergenic | 50.0% | |
| TGTGTGTTTGGTATGACGGC+GGG | + | chr5_1:16376041-16376060 | None:intergenic | 50.0% | |
| GTGTGTGTTTGGTATGACGG+CGG | + | chr5_1:16376042-16376061 | None:intergenic | 50.0% | |
| CTGACAACCCTTGATCACCT+TGG | - | chr5_1:16376376-16376395 | Msa0720390:CDS | 50.0% | |
| ! | TTGGTGGCCAAGGTGATCAA+GGG | + | chr5_1:16376386-16376405 | None:intergenic | 50.0% |
| ! | TTTGGTGGCCAAGGTGATCA+AGG | + | chr5_1:16376387-16376406 | None:intergenic | 50.0% |
| ! | GCCTAAACATTTGGTGGCCA+AGG | + | chr5_1:16376396-16376415 | None:intergenic | 50.0% |
| GGCAAAAGTGGTTCTCAAGC+TGG | - | chr5_1:16376594-16376613 | Msa0720390:CDS | 50.0% | |
| AAAAACTCTTGGCCACCGCA+AGG | + | chr5_1:16377219-16377238 | None:intergenic | 50.0% | |
| !! | ACCAAGAGAGGTGCTGCACA+TGG | - | chr5_1:16370561-16370580 | Msa0720390:intron | 55.0% |
| ACCATGTGCAGCACCTCTCT+TGG | + | chr5_1:16370565-16370584 | None:intergenic | 55.0% | |
| GTGGATCGACTAGAACGCCT+TGG | - | chr5_1:16370961-16370980 | Msa0720390:CDS | 55.0% | |
| GACCCAGTCAACAGACACGT+GGG | + | chr5_1:16372716-16372735 | None:intergenic | 55.0% | |
| TGACCCAGTCAACAGACACG+TGG | + | chr5_1:16372717-16372736 | None:intergenic | 55.0% | |
| ! | TATCTGAGGCAGGGCGAAGA+GGG | + | chr5_1:16374560-16374579 | None:intergenic | 55.0% |
| ! | CATAGGGTCGTATCTGAGGC+AGG | + | chr5_1:16374570-16374589 | None:intergenic | 55.0% |
| AGGTCTCCAAACGGCGTTTG+AGG | + | chr5_1:16375202-16375221 | None:intergenic | 55.0% | |
| CCAGGGTGAAGGTCTCCAAA+CGG | + | chr5_1:16375211-16375230 | None:intergenic | 55.0% | |
| GGTGTGGGTGAGGGTAAAGA+AGG | + | chr5_1:16375388-16375407 | None:intergenic | 55.0% | |
| !! | ATGGGTTGGGCAAGAGGAAC+TGG | + | chr5_1:16375442-16375461 | None:intergenic | 55.0% |
| GTTGTGACTCCTGTGAGTGG+GGG | - | chr5_1:16375716-16375735 | Msa0720390:intron | 55.0% | |
| GTGTGTTTGGTATGACGGCG+GGG | + | chr5_1:16376040-16376059 | None:intergenic | 55.0% | |
| TGACCCAGTCAACGCTGACG+TGG | - | chr5_1:16371489-16371508 | Msa0720390:intron | 60.0% | |
| !! | CGTCCACGTCAGCGTTGACT+GGG | + | chr5_1:16371495-16371514 | None:intergenic | 60.0% |
| !! | ACGTCCACGTCAGCGTTGAC+TGG | + | chr5_1:16371496-16371515 | None:intergenic | 60.0% |
| ! | CGCCCACGTGTCTGTTGACT+GGG | - | chr5_1:16372711-16372730 | Msa0720390:intron | 60.0% |
| ! | GTATCTGAGGCAGGGCGAAG+AGG | + | chr5_1:16374561-16374580 | None:intergenic | 60.0% |
| CCGTTTGGAGACCTTCACCC+TGG | - | chr5_1:16375208-16375227 | Msa0720390:intron | 60.0% | |
| GCGCCCACGTGTCTGTTGAC+TGG | - | chr5_1:16372710-16372729 | Msa0720390:intron | 65.0% | |
| GCGAAGAGGGCGACCGCCCT+TGG | + | chr5_1:16374547-16374566 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 16370245 | 16377330 | 16370245 | ID=Msa0720390;Name=Msa0720390 |
| chr5_1 | mRNA | 16370245 | 16377330 | 16370245 | ID=Msa0720390-mRNA-1;Parent=Msa0720390;Name=Msa0720390-mRNA-1;_AED=0.23;_eAED=0.25;_QI=0|0|0|1|1|1|9|0|490 |
| chr5_1 | exon | 16377161 | 16377330 | 16377161 | ID=Msa0720390-mRNA-1:exon:6259;Parent=Msa0720390-mRNA-1 |
| chr5_1 | exon | 16376803 | 16377017 | 16376803 | ID=Msa0720390-mRNA-1:exon:6258;Parent=Msa0720390-mRNA-1 |
| chr5_1 | exon | 16376538 | 16376658 | 16376538 | ID=Msa0720390-mRNA-1:exon:6257;Parent=Msa0720390-mRNA-1 |
| chr5_1 | exon | 16376297 | 16376409 | 16376297 | ID=Msa0720390-mRNA-1:exon:6256;Parent=Msa0720390-mRNA-1 |
| chr5_1 | exon | 16374004 | 16374230 | 16374004 | ID=Msa0720390-mRNA-1:exon:6255;Parent=Msa0720390-mRNA-1 |
| chr5_1 | exon | 16373444 | 16373559 | 16373444 | ID=Msa0720390-mRNA-1:exon:6254;Parent=Msa0720390-mRNA-1 |
| chr5_1 | exon | 16372393 | 16372570 | 16372393 | ID=Msa0720390-mRNA-1:exon:6253;Parent=Msa0720390-mRNA-1 |
| chr5_1 | exon | 16370875 | 16370982 | 16370875 | ID=Msa0720390-mRNA-1:exon:6252;Parent=Msa0720390-mRNA-1 |
| chr5_1 | exon | 16370245 | 16370469 | 16370245 | ID=Msa0720390-mRNA-1:exon:6251;Parent=Msa0720390-mRNA-1 |
| chr5_1 | CDS | 16377161 | 16377330 | 16377161 | ID=Msa0720390-mRNA-1:cds;Parent=Msa0720390-mRNA-1 |
| chr5_1 | CDS | 16376803 | 16377017 | 16376803 | ID=Msa0720390-mRNA-1:cds;Parent=Msa0720390-mRNA-1 |
| chr5_1 | CDS | 16376538 | 16376658 | 16376538 | ID=Msa0720390-mRNA-1:cds;Parent=Msa0720390-mRNA-1 |
| chr5_1 | CDS | 16376297 | 16376409 | 16376297 | ID=Msa0720390-mRNA-1:cds;Parent=Msa0720390-mRNA-1 |
| chr5_1 | CDS | 16374004 | 16374230 | 16374004 | ID=Msa0720390-mRNA-1:cds;Parent=Msa0720390-mRNA-1 |
| chr5_1 | CDS | 16373444 | 16373559 | 16373444 | ID=Msa0720390-mRNA-1:cds;Parent=Msa0720390-mRNA-1 |
| chr5_1 | CDS | 16372393 | 16372570 | 16372393 | ID=Msa0720390-mRNA-1:cds;Parent=Msa0720390-mRNA-1 |
| chr5_1 | CDS | 16370875 | 16370982 | 16370875 | ID=Msa0720390-mRNA-1:cds;Parent=Msa0720390-mRNA-1 |
| chr5_1 | CDS | 16370245 | 16370469 | 16370245 | ID=Msa0720390-mRNA-1:cds;Parent=Msa0720390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
