AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0545700


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0545700 MtrunA17_Chr4g0037761 54.255 94 33 2 58 141 92 185 2.44e-24 98.2
Msa0545700 MtrunA17_Chr4g0037741 65.854 82 20 1 58 131 92 173 4.42e-21 89.4
Msa0545700 MtrunA17_Chr4g0037791 46.250 80 37 1 58 131 162 241 1.34e-16 78.2
Msa0545700 MtrunA17_Chr3g0125141 50.794 63 31 0 131 193 1 63 2.62e-13 63.9
Msa0545700 MtrunA17_Chr1g0197101 67.347 49 14 1 27 75 55 101 5.12e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0545700 AT3G18630.1 40.000 80 42 1 58 131 190 269 2.05e-13 69.7

Find 73 sgRNAs with CRISPR-Local

Find 325 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAACTCGGGGACGTCTTTA+TGG 0.223896 4_1:-36226801 Msa0545700:CDS
CTCAAGTACATTCTTCAAAA+TGG 0.251262 4_1:+36229314 None:intergenic
AGATTAGGACACATTATATT+AGG 0.275665 4_1:-36229585 Msa0545700:CDS
GAGGAGGTTAAGAATGATAT+TGG 0.297392 4_1:-36229294 Msa0545700:CDS
TCTTGAGCAGGAAATATATA+AGG 0.314319 4_1:-36226908 Msa0545700:intron
GCAGAAACATCGCTACTAAA+TGG 0.325133 4_1:+36226711 None:intergenic
GCAAATGCACATGCAAATAT+AGG 0.331732 4_1:-36228595 Msa0545700:CDS
ATGGAGATACATGCGATTGC+TGG 0.354645 4_1:+36226730 None:intergenic
TCTTTATGGTACTGGTGATA+TGG 0.360936 4_1:-36226787 Msa0545700:CDS
TAAGAATGATATTGGTTGTA+AGG 0.362595 4_1:-36229286 Msa0545700:CDS
GATGCAGGGCAGCTGGATAC+AGG 0.367904 4_1:-36227796 Msa0545700:CDS
AATGAAGGGGAGTCGGATGC+AGG 0.398008 4_1:-36227826 Msa0545700:CDS
ATGGAGAAGGCATCTGATAA+TGG 0.415861 4_1:-36226880 Msa0545700:CDS
ATACATGCGATTGCTGGGTC+AGG 0.420610 4_1:+36226736 None:intergenic
GCAGCTGGATACAGGGCATC+TGG 0.424953 4_1:-36227788 Msa0545700:CDS
GAATATTGATCAGACTTTGA+AGG 0.433586 4_1:-36229551 Msa0545700:CDS
TGCCATCTGTGCAGCAATCC+CGG 0.434209 4_1:+36226689 None:intergenic
GATGCAGGGGAGCAAGATGC+AGG 0.440869 4_1:-36227811 Msa0545700:CDS
TCACTTTGATCAATATTGTC+AGG 0.442772 4_1:-36229509 Msa0545700:intron
GGAAATATATAAGGAAAAGA+TGG 0.452924 4_1:-36226899 Msa0545700:CDS
GGAGCAAGATGCAGGGCAGC+TGG 0.459296 4_1:-36227803 Msa0545700:CDS
GAAAGGGTTCTGGTCAGAAA+AGG 0.459541 4_1:-36230044 Msa0545700:CDS
CGGGGACGTCTTTATGGTAC+TGG 0.463568 4_1:-36226795 Msa0545700:CDS
TGAATCAGTTGGGGAAAACT+CGG 0.472248 4_1:-36226815 Msa0545700:intron
TTTAGGATTCTCGGGAGAAA+GGG 0.483090 4_1:-36230060 Msa0545700:intron
CAAGACGATCATAGAGAAGA+AGG 0.483910 4_1:-36228545 Msa0545700:CDS
CCGACTCCCCTTCATTCAGC+TGG 0.484775 4_1:+36227833 None:intergenic
AAAGGGTTCTGGTCAGAAAA+GGG 0.485467 4_1:-36230043 Msa0545700:CDS
AAAAGGGGTTCTCGTGAGGA+AGG 0.489237 4_1:-36230027 Msa0545700:CDS
TGCCGGGATTGCTGCACAGA+TGG 0.489369 4_1:-36226691 Msa0545700:CDS
GAATCAGTTGGGGAAAACTC+GGG 0.490079 4_1:-36226814 Msa0545700:intron
TGTTGCAGGATCAACCTCCT+TGG 0.491758 4_1:+36226855 None:intergenic
ATTCTCGGGAGAAAGGGTTC+TGG 0.492803 4_1:-36230054 Msa0545700:CDS
GACGCAGACCAGCTGAATGA+AGG 0.498682 4_1:-36227841 Msa0545700:CDS
AAGGGGTTCTCGTGAGGAAG+GGG 0.506139 4_1:-36230025 Msa0545700:CDS
ATGGTAAAGCGCTACAAGCC+AGG 0.510350 4_1:-36226768 Msa0545700:CDS
CAAGCGACTAAGAATCTACA+TGG 0.511335 4_1:-36227916 Msa0545700:CDS
AGTACATTCTTCAAAATGGA+TGG 0.513241 4_1:+36229318 None:intergenic
TGGAGATACATGCGATTGCT+GGG 0.515926 4_1:+36226731 None:intergenic
TGGTCTGCGTCCCTCTGCCA+TGG 0.521247 4_1:+36227853 None:intergenic
CGATCATAGAGAAGAAGGAA+GGG 0.522025 4_1:-36228540 Msa0545700:CDS
GGTTGTAAGGTTCTACCTCA+TGG 0.523538 4_1:-36229273 Msa0545700:CDS
TTTAGTAGCGATGTTTCTGC+CGG 0.526078 4_1:-36226708 Msa0545700:CDS
ATGAAGGGGAGTCGGATGCA+GGG 0.537318 4_1:-36227825 Msa0545700:CDS
ACGCAGACCAGCTGAATGAA+GGG 0.538664 4_1:-36227840 Msa0545700:CDS
GTGGACCTTTGACCTTCTCA+CGG 0.544091 4_1:+36227977 None:intergenic
GTCGCTTGTTTCAACTTATG+CGG 0.544680 4_1:+36227931 None:intergenic
TGAAGGGGAGTCGGATGCAG+GGG 0.545352 4_1:-36227824 Msa0545700:CDS
AAAGGGGTTCTCGTGAGGAA+GGG 0.558035 4_1:-36230026 Msa0545700:CDS
TGGGTCAGGGAGGATACACC+TGG 0.562237 4_1:+36226750 None:intergenic
TTTGAAGAATGTACTTGAGG+AGG 0.565288 4_1:-36229310 Msa0545700:CDS
CCAGCTGAATGAAGGGGAGT+CGG 0.584342 4_1:-36227833 Msa0545700:CDS
TACATGCGATTGCTGGGTCA+GGG 0.585246 4_1:+36226737 None:intergenic
ATGCAGGGCAGCTGGATACA+GGG 0.585703 4_1:-36227795 Msa0545700:CDS
GTAGAGAGCAAATGCAGCAG+AGG 0.591348 4_1:-36226660 Msa0545700:CDS
ACGATCATAGAGAAGAAGGA+AGG 0.593493 4_1:-36228541 Msa0545700:CDS
ACACTACAACACCATGGCAG+AGG 0.594560 4_1:-36227864 Msa0545700:CDS
TCCTAAAGAAAACCGTGAGA+AGG 0.598029 4_1:-36227989 Msa0545700:CDS
ATGCAGGGGAGCAAGATGCA+GGG 0.599090 4_1:-36227810 Msa0545700:CDS
TTAGTAGCGATGTTTCTGCC+GGG 0.605309 4_1:-36226707 Msa0545700:CDS
CACTACAACACCATGGCAGA+GGG 0.606712 4_1:-36227863 Msa0545700:CDS
ATATAAGGAAAAGATGGAGA+AGG 0.610735 4_1:-36226893 Msa0545700:CDS
GATCATAGAGAAGAAGGAAG+GGG 0.611255 4_1:-36228539 Msa0545700:CDS
GAAAACCGTGAGAAGGTCAA+AGG 0.614702 4_1:-36227982 Msa0545700:CDS
GGCATCTGATAATGGAACCA+AGG 0.625874 4_1:-36226872 Msa0545700:CDS
CGCAGACCAGCTGAATGAAG+GGG 0.641381 4_1:-36227839 Msa0545700:CDS
TCAGAAAAGGGGTTCTCGTG+AGG 0.642945 4_1:-36230031 Msa0545700:CDS
AATCAGTTGGGGAAAACTCG+GGG 0.645431 4_1:-36226813 Msa0545700:intron
AAGGGTTCTGGTCAGAAAAG+GGG 0.652348 4_1:-36230042 Msa0545700:CDS
ATGCGATTGCTGGGTCAGGG+AGG 0.699744 4_1:+36226740 None:intergenic
ATCTGATAATGGAACCAAGG+AGG 0.721491 4_1:-36226869 Msa0545700:intron
GTGATGACACTACAACACCA+TGG 0.735647 4_1:-36227870 Msa0545700:CDS
GTTGTAGTGTCATCACTGAG+AGG 0.751986 4_1:+36227877 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTTTGTTTATGATTT+TGG - chr4_1:36227371-36227390 Msa0545700:intron 10.0%
!! TTAAATCTATAAAATTGATA+TGG + chr4_1:36230111-36230130 None:intergenic 10.0%
!!! ATATCAATTTTATAGATTTA+AGG - chr4_1:36230110-36230129 Msa0545700:intron 10.0%
!!! TAAATTTTTTATTTTGAAAG+AGG + chr4_1:36230254-36230273 None:intergenic 10.0%
!!! GAATTTTTGGAAAAAAAAAT+TGG + chr4_1:36227439-36227458 None:intergenic 15.0%
!!! ATTTTTAAGAATGAAATGTT+TGG + chr4_1:36228587-36228606 None:intergenic 15.0%
!!! CACTTTAGTATATTTTATTA+CGG + chr4_1:36228673-36228692 None:intergenic 15.0%
!! AATAAAATATACTAAAGTGA+CGG - chr4_1:36228674-36228693 Msa0545700:intron 15.0%
!!! ACAACTTTAATTTAATTTCA+GGG - chr4_1:36228897-36228916 Msa0545700:intron 15.0%
!! AAATTTATAGAATCATCTAA+TGG + chr4_1:36229265-36229284 None:intergenic 15.0%
!! ATTAGATGATTCTATAAATT+TGG - chr4_1:36229264-36229283 Msa0545700:CDS 15.0%
!! TTAGAATATTAATTAGTGTA+TGG + chr4_1:36229632-36229651 None:intergenic 15.0%
!!! TAATCTTAAGATTATTTTCA+AGG - chr4_1:36230064-36230083 Msa0545700:intron 15.0%
!!! AATCTTAAGATTATTTTCAA+GGG - chr4_1:36230065-36230084 Msa0545700:intron 15.0%
!!! TGCAGTTAATTATTTTTTTT+CGG + chr4_1:36230328-36230347 None:intergenic 15.0%
!! TAATAATTTCTTATGGTTCA+AGG - chr4_1:36226791-36226810 Msa0545700:CDS 20.0%
!!! AAGAATTTTGTCTTCTTTTT+TGG - chr4_1:36227025-36227044 Msa0545700:intron 20.0%
!!! AATTGAAATTTTGGGATTAA+GGG + chr4_1:36227410-36227429 None:intergenic 20.0%
!!! TAATTGAAATTTTGGGATTA+AGG + chr4_1:36227411-36227430 None:intergenic 20.0%
!! ATCCCAAAATTTCAATTATT+TGG - chr4_1:36227413-36227432 Msa0545700:intron 20.0%
!!! TTCTCTATCAATAGAATTTT+TGG + chr4_1:36227452-36227471 None:intergenic 20.0%
!! AGACTTACAAAAATTGAAAA+TGG + chr4_1:36227735-36227754 None:intergenic 20.0%
!! CTATACGAATAGATTAAATA+TGG - chr4_1:36227988-36228007 Msa0545700:CDS 20.0%
!! TCTATAGAAATGTTAGAAAT+TGG - chr4_1:36228523-36228542 Msa0545700:intron 20.0%
!!! CTTTTTTACAAAAAATTGAG+AGG + chr4_1:36228647-36228666 None:intergenic 20.0%
!! CTGAAATTAAATTAAAGTTG+TGG + chr4_1:36228898-36228917 None:intergenic 20.0%
!!! CACAACTTTAATTTAATTTC+AGG - chr4_1:36228896-36228915 Msa0545700:intron 20.0%
!! ATTACTAAACAAAAGTTCAA+GGG + chr4_1:36229492-36229511 None:intergenic 20.0%
!! TATTACTAAACAAAAGTTCA+AGG + chr4_1:36229493-36229512 None:intergenic 20.0%
!!! TCTTTTACATATTGAATTTG+AGG - chr4_1:36229521-36229540 Msa0545700:CDS 20.0%
!!! TAACAAATGTGTTTTTGTTT+TGG - chr4_1:36229569-36229588 Msa0545700:CDS 20.0%
!!! CTATATTCTCTTATGTTTTT+TGG - chr4_1:36229705-36229724 Msa0545700:intron 20.0%
!! TTAAGATTATGATCATGATT+AGG + chr4_1:36230053-36230072 None:intergenic 20.0%
!! ATCTATAAAATTGATATGGA+AGG + chr4_1:36230107-36230126 None:intergenic 20.0%
!!! AATTTTATAGATTTAAGGCT+GGG - chr4_1:36230115-36230134 Msa0545700:intron 20.0%
!!! TTTTTTATTTTGAAAGAGGA+AGG + chr4_1:36230250-36230269 None:intergenic 20.0%
!!! GCATATAATTTTCAATTTTG+CGG - chr4_1:36230526-36230545 Msa0545700:intron 20.0%
! ATGCAGGTAATAATTTCTTA+TGG - chr4_1:36226784-36226803 Msa0545700:CDS 25.0%
! AGCATTCAACAACAATAATA+TGG + chr4_1:36226819-36226838 None:intergenic 25.0%
! ATTCATATTCAGGGATTATA+AGG + chr4_1:36226989-36227008 None:intergenic 25.0%
! TAGGATTATACAATTCTTTC+AGG + chr4_1:36227063-36227082 None:intergenic 25.0%
! ATTGTATAATCCTAAGAAGT+TGG - chr4_1:36227069-36227088 Msa0545700:intron 25.0%
!!! GTAATTTTTTAGAGTAGTGA+CGG - chr4_1:36227164-36227183 Msa0545700:intron 25.0%
! TAGCCATCAATAATTATAGA+CGG - chr4_1:36227258-36227277 Msa0545700:intron 25.0%
! AATCCGTCTATAATTATTGA+TGG + chr4_1:36227264-36227283 None:intergenic 25.0%
!!! CAATAATTATAGACGGATTT+TGG - chr4_1:36227265-36227284 Msa0545700:intron 25.0%
! AAATAAATGTATCATACCGA+GGG + chr4_1:36227316-36227335 None:intergenic 25.0%
! TAAATAAATGTATCATACCG+AGG + chr4_1:36227317-36227336 None:intergenic 25.0%
!!! ATTGAAATTTTGGGATTAAG+GGG + chr4_1:36227409-36227428 None:intergenic 25.0%
!! GGCCAAATAATTGAAATTTT+GGG + chr4_1:36227418-36227437 None:intergenic 25.0%
!! TGGCCAAATAATTGAAATTT+TGG + chr4_1:36227419-36227438 None:intergenic 25.0%
!!! ATATTCGATTTTAGGATTCT+CGG - chr4_1:36227660-36227679 Msa0545700:intron 25.0%
! ATTCCATACATGTATATTTG+TGG - chr4_1:36227784-36227803 Msa0545700:intron 25.0%
! TAACCACAAATATACATGTA+TGG + chr4_1:36227790-36227809 None:intergenic 25.0%
! ACATGTATATTTGTGGTTAT+TGG - chr4_1:36227791-36227810 Msa0545700:CDS 25.0%
! CAAATTATTCAATGTGATTG+TGG - chr4_1:36227873-36227892 Msa0545700:CDS 25.0%
!! TGTTTCTATACCAATTGAAT+TGG - chr4_1:36228017-36228036 Msa0545700:intron 25.0%
!!! TCAAGTACTGATTGAATTTT+GGG - chr4_1:36228056-36228075 Msa0545700:intron 25.0%
!!! AAAGTTGGATTTTTTTGATC+TGG - chr4_1:36228114-36228133 Msa0545700:intron 25.0%
!!! AAGTTGGATTTTTTTGATCT+GGG - chr4_1:36228115-36228134 Msa0545700:intron 25.0%
! AGATTAGGACACATTATATT+AGG - chr4_1:36228144-36228163 Msa0545700:intron 25.0%
!!! GGTTAGTTTGATAATTATCA+TGG - chr4_1:36228241-36228260 Msa0545700:intron 25.0%
!!! GATAATTATCATGGTTTTAC+TGG - chr4_1:36228250-36228269 Msa0545700:intron 25.0%
!!! TACTTCACTGATTTTGATTT+TGG - chr4_1:36228314-36228333 Msa0545700:intron 25.0%
!!! GATTTTGATTTTGGTCTTTT+AGG - chr4_1:36228323-36228342 Msa0545700:intron 25.0%
!! TAAGAATGATATTGGTTGTA+AGG - chr4_1:36228443-36228462 Msa0545700:intron 25.0%
!! TCTATAGAAGCTTTAATCAA+TGG + chr4_1:36228511-36228530 None:intergenic 25.0%
! AAAAGAGTGATTTCTTTGAA+TGG - chr4_1:36228621-36228640 Msa0545700:intron 25.0%
! ATTCACAATTAAAGCATACA+TGG - chr4_1:36228719-36228738 Msa0545700:intron 25.0%
! TAATACACCAAACATAGTAA+GGG + chr4_1:36229047-36229066 None:intergenic 25.0%
! ATAATACACCAAACATAGTA+AGG + chr4_1:36229048-36229067 None:intergenic 25.0%
! TTGGAGTAAATGATTCAATT+CGG - chr4_1:36229283-36229302 Msa0545700:CDS 25.0%
!!! AAATGTGTTTTTGTTTTGGT+TGG - chr4_1:36229573-36229592 Msa0545700:CDS 25.0%
!!! CAATTTTATAGATTTAAGGC+TGG - chr4_1:36230114-36230133 Msa0545700:intron 25.0%
! TTCTTATGTAAGGAATAGTT+GGG + chr4_1:36230226-36230245 None:intergenic 25.0%
! ATTCTTATGTAAGGAATAGT+TGG + chr4_1:36230227-36230246 None:intergenic 25.0%
! TGTTGTAATTACTATCTTAG+TGG - chr4_1:36230504-36230523 Msa0545700:intron 25.0%
!! ATAATTTTCAATTTTGCGGA+TGG - chr4_1:36230530-36230549 Msa0545700:intron 25.0%
! GGAAATATATAAGGAAAAGA+TGG - chr4_1:36230830-36230849 Msa0545700:intron 25.0%
! TGCAACACAATTGAAATTAT+GGG - chr4_1:36230890-36230909 Msa0545700:intron 25.0%
GTTTGAGAGGAGAATTATAT+AGG + chr4_1:36226716-36226735 None:intergenic 30.0%
ACTTAAGGATTGAAAGTGAT+TGG + chr4_1:36226856-36226875 None:intergenic 30.0%
! AGTTGATTTATGTTCTCCAA+TGG + chr4_1:36226915-36226934 None:intergenic 30.0%
TCTCACATGATTCATATTCA+GGG + chr4_1:36226998-36227017 None:intergenic 30.0%
! CTACTCTAAAAAATTACCCA+CGG + chr4_1:36227161-36227180 None:intergenic 30.0%
! TGAGCTTTTAATCTTAGAGA+CGG + chr4_1:36227206-36227225 None:intergenic 30.0%
!!! TTTTTTGAAATTGCTACCCA+CGG - chr4_1:36227233-36227252 Msa0545700:intron 30.0%
AAGAAAAGAATGAGATGGTT+GGG + chr4_1:36227608-36227627 None:intergenic 30.0%
! CTCTCTCTATATTCGATTTT+AGG - chr4_1:36227652-36227671 Msa0545700:intron 30.0%
!!! TATTCGATTTTAGGATTCTC+GGG - chr4_1:36227661-36227680 Msa0545700:intron 30.0%
!! TTTTCAATTGACTCTGATTG+TGG - chr4_1:36227838-36227857 Msa0545700:CDS 30.0%
!!! GTCAAGTACTGATTGAATTT+TGG - chr4_1:36228055-36228074 Msa0545700:intron 30.0%
!!! CAAGTACTGATTGAATTTTG+GGG - chr4_1:36228057-36228076 Msa0545700:intron 30.0%
!! GATTTGTGGTTTTTGAAAGT+TGG - chr4_1:36228099-36228118 Msa0545700:intron 30.0%
GAATATTGATCAGACTTTGA+AGG - chr4_1:36228178-36228197 Msa0545700:intron 30.0%
TCACTTTGATCAATATTGTC+AGG - chr4_1:36228220-36228239 Msa0545700:intron 30.0%
AGTACATTCTTCAAAATGGA+TGG + chr4_1:36228414-36228433 None:intergenic 30.0%
CTCAAGTACATTCTTCAAAA+TGG + chr4_1:36228418-36228437 None:intergenic 30.0%
!! CATTTTGAAGAATGTACTTG+AGG - chr4_1:36228416-36228435 Msa0545700:intron 30.0%
TCATGGCAATCTTGAAAAAT+GGG - chr4_1:36228473-36228492 Msa0545700:intron 30.0%
TGTGAACACATTATGAAGTT+AGG - chr4_1:36228756-36228775 Msa0545700:intron 30.0%
TGTTTATTCTAAATGCAGAG+TGG - chr4_1:36228783-36228802 Msa0545700:intron 30.0%
GTTTATTCTAAATGCAGAGT+GGG - chr4_1:36228784-36228803 Msa0545700:intron 30.0%
AAATGAGTGAACAACAGAAA+GGG + chr4_1:36228813-36228832 None:intergenic 30.0%
! GAACTTCTAATCAAGAGTAT+TGG - chr4_1:36228971-36228990 Msa0545700:intron 30.0%
AAAATGACCCTTACTATGTT+TGG - chr4_1:36229037-36229056 Msa0545700:intron 30.0%
!! TTGTAACTAGCTTTCAATTC+AGG - chr4_1:36229092-36229111 Msa0545700:intron 30.0%
ATTAGCACTATAAGCTCAAT+TGG + chr4_1:36229439-36229458 None:intergenic 30.0%
ATGAATGATTGAAGTCCTTA+AGG - chr4_1:36229596-36229615 Msa0545700:intron 30.0%
!! TATGCGAACTTTAAAACAGA+CGG + chr4_1:36229659-36229678 None:intergenic 30.0%
!!! TATGTTTTTTGGACAGATCA+TGG - chr4_1:36229716-36229735 Msa0545700:intron 30.0%
!! TAAGATTATTTTCAAGGGCA+AGG - chr4_1:36230070-36230089 Msa0545700:intron 30.0%
!! AAGATTATTTTCAAGGGCAA+GGG - chr4_1:36230071-36230090 Msa0545700:intron 30.0%
! TAATTAACTGCACCTCTTTT+TGG - chr4_1:36230336-36230355 Msa0545700:intron 30.0%
GACAATGCATAAAATATGCA+AGG + chr4_1:36230387-36230406 None:intergenic 30.0%
AATACTCAACATTGTTGTAG+AGG + chr4_1:36230450-36230469 None:intergenic 30.0%
! GTTGAGTATTGTCAACTATT+TGG - chr4_1:36230460-36230479 Msa0545700:intron 30.0%
TGGAATAAATTGTGCATGTT+GGG - chr4_1:36230613-36230632 Msa0545700:intron 30.0%
TCTTGAGCAGGAAATATATA+AGG - chr4_1:36230821-36230840 Msa0545700:intron 30.0%
ATATAAGGAAAAGATGGAGA+AGG - chr4_1:36230836-36230855 Msa0545700:intron 30.0%
CATAATTTCAATTGTGTTGC+AGG + chr4_1:36230891-36230910 None:intergenic 30.0%
CTGCAACACAATTGAAATTA+TGG - chr4_1:36230889-36230908 Msa0545700:intron 30.0%
TAAATCATGGACATGATCTC+TGG + chr4_1:36226682-36226701 None:intergenic 35.0%
TTTCACACACATTGTTTGAG+AGG + chr4_1:36226729-36226748 None:intergenic 35.0%
TAATCATCTTCTTGCAATGC+AGG - chr4_1:36226768-36226787 Msa0545700:CDS 35.0%
TAAGGATTGAAAGTGATTGG+AGG + chr4_1:36226853-36226872 None:intergenic 35.0%
ATAGAGGCAGCTATTATCAA+GGG + chr4_1:36226887-36226906 None:intergenic 35.0%
TATAGAGGCAGCTATTATCA+AGG + chr4_1:36226888-36226907 None:intergenic 35.0%
TTCTCCAATGGTAACTATAG+AGG + chr4_1:36226903-36226922 None:intergenic 35.0%
! AGATTTTGTAGCCTATGTTC+TGG - chr4_1:36226942-36226961 Msa0545700:intron 35.0%
GATTATAAGGCCAACTTCTT+AGG + chr4_1:36226976-36226995 None:intergenic 35.0%
CTCTCACATGATTCATATTC+AGG + chr4_1:36226999-36227018 None:intergenic 35.0%
!! ATACAATTCTTTCAGGTTGC+AGG + chr4_1:36227056-36227075 None:intergenic 35.0%
CATTATAAGGCCAACTTCTT+AGG + chr4_1:36227082-36227101 None:intergenic 35.0%
!! CTAAGAAGTTGGCCTTATAA+TGG - chr4_1:36226974-36226993 Msa0545700:intron 35.0%
CTTGTAGTGGTTCCATTATA+AGG + chr4_1:36227095-36227114 None:intergenic 35.0%
! AATGAGGGATTTTCTTGTAG+TGG + chr4_1:36227108-36227127 None:intergenic 35.0%
TAATTGTTCGTGGGTAATGA+GGG + chr4_1:36227123-36227142 None:intergenic 35.0%
TGGTCGTCAATAGTTATCTA+CGG - chr4_1:36227285-36227304 Msa0545700:intron 35.0%
GAAGAAAAGAATGAGATGGT+TGG + chr4_1:36227609-36227628 None:intergenic 35.0%
GATCGAAGAAAAGAATGAGA+TGG + chr4_1:36227613-36227632 None:intergenic 35.0%
CAAACACAAGCCAATTCAAT+TGG + chr4_1:36228030-36228049 None:intergenic 35.0%
!! ATTGAATTTTGGGGATCTGA+AGG - chr4_1:36228066-36228085 Msa0545700:intron 35.0%
!! TTGAATTTTGGGGATCTGAA+GGG - chr4_1:36228067-36228086 Msa0545700:intron 35.0%
!! GTCTTTTAGGAACCTTATTC+TGG - chr4_1:36228336-36228355 Msa0545700:intron 35.0%
TTTGAAGAATGTACTTGAGG+AGG - chr4_1:36228419-36228438 Msa0545700:intron 35.0%
GAGGAGGTTAAGAATGATAT+TGG - chr4_1:36228435-36228454 Msa0545700:intron 35.0%
!!! CATTTTTCAAGATTGCCATG+AGG + chr4_1:36228474-36228493 None:intergenic 35.0%
CTCATGGCAATCTTGAAAAA+TGG - chr4_1:36228472-36228491 Msa0545700:intron 35.0%
CAAATGAGTGAACAACAGAA+AGG + chr4_1:36228814-36228833 None:intergenic 35.0%
AGTCATAAACTGTTTGTGCA+TGG - chr4_1:36229002-36229021 Msa0545700:intron 35.0%
!! AACTAGCTTTCAATTCAGGT+AGG - chr4_1:36229096-36229115 Msa0545700:intron 35.0%
GCAAATGCACATGCAAATAT+AGG - chr4_1:36229134-36229153 Msa0545700:intron 35.0%
GTCATCACTATGTGATTTCA+TGG + chr4_1:36229316-36229335 None:intergenic 35.0%
TATGGTGTACATGTTCCTTA+AGG + chr4_1:36229614-36229633 None:intergenic 35.0%
!!! ATCATCCACTTTTTCATCTG+TGG + chr4_1:36229774-36229793 None:intergenic 35.0%
! TCTTTCCTTTTTCTTGTACG+AGG - chr4_1:36230185-36230204 Msa0545700:intron 35.0%
AGAGGAAGGATTCTTATGTA+AGG + chr4_1:36230236-36230255 None:intergenic 35.0%
!!! TTTTTTCGGTGTATACCCAT+AGG + chr4_1:36230314-36230333 None:intergenic 35.0%
TGCATAAAATATGCAAGGTC+CGG + chr4_1:36230382-36230401 None:intergenic 35.0%
TTATTCCACATTCCTGTGAA+AGG + chr4_1:36230601-36230620 None:intergenic 35.0%
GTGGAATAAATTGTGCATGT+TGG - chr4_1:36230612-36230631 Msa0545700:intron 35.0%
!! ATGTTTGTTTTCTCTTGAGC+AGG - chr4_1:36230809-36230828 Msa0545700:intron 35.0%
! AAATTATGGGCTGAATCAGT+TGG - chr4_1:36230903-36230922 Msa0545700:intron 35.0%
! AATTATGGGCTGAATCAGTT+GGG - chr4_1:36230904-36230923 Msa0545700:intron 35.0%
!! TCTTTATGGTACTGGTGATA+TGG - chr4_1:36230942-36230961 Msa0545700:intron 35.0%
GGTGACACTCTTGTAAATCA+TGG + chr4_1:36226695-36226714 None:intergenic 40.0%
AGGTAGTTATGCCAGAACAT+AGG + chr4_1:36226956-36226975 None:intergenic 40.0%
GGCATAACTACCTAAGAAGT+TGG - chr4_1:36226963-36226982 Msa0545700:intron 40.0%
GTAATTGTTCGTGGGTAATG+AGG + chr4_1:36227124-36227143 None:intergenic 40.0%
! ATTATTGATGGCTAAGCCGT+GGG + chr4_1:36227252-36227271 None:intergenic 40.0%
! AATTATTGATGGCTAAGCCG+TGG + chr4_1:36227253-36227272 None:intergenic 40.0%
TGGGATTAAGGGGAAAAGTT+TGG + chr4_1:36227399-36227418 None:intergenic 40.0%
TTCACGAAAGAGAGAGGAAT+GGG + chr4_1:36227518-36227537 None:intergenic 40.0%
TCGAATATAGAGAGAGAGAG+AGG + chr4_1:36227648-36227667 None:intergenic 40.0%
!!! TTTTAGGATTCTCGGGAGAA+AGG - chr4_1:36227668-36227687 Msa0545700:intron 40.0%
! TTTAGGATTCTCGGGAGAAA+GGG - chr4_1:36227669-36227688 Msa0545700:intron 40.0%
! AAAGGGTTCTGGTCAGAAAA+GGG - chr4_1:36227686-36227705 Msa0545700:intron 40.0%
ACTCTGATTGTGGCTTATTG+TGG - chr4_1:36227848-36227867 Msa0545700:CDS 40.0%
!! GAATTGGCTTGTGTTTGACT+TGG - chr4_1:36228033-36228052 Msa0545700:intron 40.0%
!!! AAGGGTGTTTTGTGGATTTG+TGG - chr4_1:36228085-36228104 Msa0545700:intron 40.0%
TAGGAACCTTATTCTGGACT+TGG - chr4_1:36228342-36228361 Msa0545700:intron 40.0%
AGCAATGGGGCTATAATTCT+CGG - chr4_1:36228368-36228387 Msa0545700:intron 40.0%
CTATAATTCTCGGTTCCTCA+GGG - chr4_1:36228378-36228397 Msa0545700:intron 40.0%
TCTTGAAAAATGGGATGTGC+AGG - chr4_1:36228482-36228501 Msa0545700:intron 40.0%
!! AGTGACGGATTTCAGATTTG+TGG - chr4_1:36228689-36228708 Msa0545700:intron 40.0%
TGTTCACTCATTTGTGCAGA+TGG - chr4_1:36228820-36228839 Msa0545700:intron 40.0%
CAAGACGATCATAGAGAAGA+AGG - chr4_1:36229184-36229203 Msa0545700:intron 40.0%
ACGATCATAGAGAAGAAGGA+AGG - chr4_1:36229188-36229207 Msa0545700:intron 40.0%
CGATCATAGAGAAGAAGGAA+GGG - chr4_1:36229189-36229208 Msa0545700:intron 40.0%
GATCATAGAGAAGAAGGAAG+GGG - chr4_1:36229190-36229209 Msa0545700:intron 40.0%
AGTATGCGCAGGAGAAAATT+CGG - chr4_1:36229234-36229253 Msa0545700:intron 40.0%
CTGAAGGATAAGAGCAAGTA+TGG + chr4_1:36229469-36229488 None:intergenic 40.0%
AACAAAAGTTCAAGGGCTGA+AGG + chr4_1:36229485-36229504 None:intergenic 40.0%
AGATGAGATGAAATCGACGT+AGG - chr4_1:36229545-36229564 Msa0545700:CDS 40.0%
TCCTAAAGAAAACCGTGAGA+AGG - chr4_1:36229740-36229759 Msa0545700:intron 40.0%
! ACCTTCTCACGGTTTTCTTT+AGG + chr4_1:36229744-36229763 None:intergenic 40.0%
AAGGTCCACAGATGAAAAAG+TGG - chr4_1:36229766-36229785 Msa0545700:intron 40.0%
GTCGCTTGTTTCAACTTATG+CGG + chr4_1:36229801-36229820 None:intergenic 40.0%
CAAGCGACTAAGAATCTACA+TGG - chr4_1:36229813-36229832 Msa0545700:intron 40.0%
TTGGATCCATGTGTTTCACT+AGG - chr4_1:36230020-36230039 Msa0545700:CDS 40.0%
GCTTTACCTAGTGAAACACA+TGG + chr4_1:36230029-36230048 None:intergenic 40.0%
ACTGGAAGGATTCTTGTCTA+GGG + chr4_1:36230282-36230301 None:intergenic 40.0%
TACTGGAAGGATTCTTGTCT+AGG + chr4_1:36230283-36230302 None:intergenic 40.0%
ACAAGAATCCTTCCAGTAGT+AGG - chr4_1:36230285-36230304 Msa0545700:intron 40.0%
CATAAAATATGCAAGGTCCG+GGG + chr4_1:36230380-36230399 None:intergenic 40.0%
GCATAAAATATGCAAGGTCC+GGG + chr4_1:36230381-36230400 None:intergenic 40.0%
TGAGCTTAGCTCAACTGATT+GGG + chr4_1:36230409-36230428 None:intergenic 40.0%
! TGTTAGTTTCCACCTTTCAC+AGG - chr4_1:36230586-36230605 Msa0545700:intron 40.0%
!! ATGGAGAAGGCATCTGATAA+TGG - chr4_1:36230849-36230868 Msa0545700:intron 40.0%
!! ATCTGATAATGGAACCAAGG+AGG - chr4_1:36230860-36230879 Msa0545700:intron 40.0%
! ATTATGGGCTGAATCAGTTG+GGG - chr4_1:36230905-36230924 Msa0545700:intron 40.0%
TGAATCAGTTGGGGAAAACT+CGG - chr4_1:36230914-36230933 Msa0545700:intron 40.0%
GCAGAAACATCGCTACTAAA+TGG + chr4_1:36231021-36231040 None:intergenic 40.0%
! TTTAGTAGCGATGTTTCTGC+CGG - chr4_1:36231021-36231040 Msa0545700:intron 40.0%
ATCATGGACATGATCTCTGG+TGG + chr4_1:36226679-36226698 None:intergenic 45.0%
TCAAGGGCTTGCATCACTTA+AGG + chr4_1:36226871-36226890 None:intergenic 45.0%
GCTGCCTCTATAGTTACCAT+TGG - chr4_1:36226896-36226915 Msa0545700:CDS 45.0%
! CTTAGAGACGGTTTAGCCTT+GGG + chr4_1:36227194-36227213 None:intergenic 45.0%
TCTTAGAGACGGTTTAGCCT+TGG + chr4_1:36227195-36227214 None:intergenic 45.0%
GTTATCTACGGTCTAACCCT+CGG - chr4_1:36227297-36227316 Msa0545700:intron 45.0%
ATGGGAACTGTTCTGTCGAT+AGG + chr4_1:36227500-36227519 None:intergenic 45.0%
GTTCACGAAAGAGAGAGGAA+TGG + chr4_1:36227519-36227538 None:intergenic 45.0%
GAATGAGATGGTTGGGCAAT+CGG + chr4_1:36227601-36227620 None:intergenic 45.0%
TAGAGAGAGAGAGAGGAAGT+CGG + chr4_1:36227641-36227660 None:intergenic 45.0%
! GAAAGGGTTCTGGTCAGAAA+AGG - chr4_1:36227685-36227704 Msa0545700:intron 45.0%
! AAGGGTTCTGGTCAGAAAAG+GGG - chr4_1:36227687-36227706 Msa0545700:intron 45.0%
! TGATCTGGGTGTTGCAGATT+AGG - chr4_1:36228129-36228148 Msa0545700:intron 45.0%
GCTTCACCAAGTCCAGAATA+AGG + chr4_1:36228351-36228370 None:intergenic 45.0%
!! TTCTGGACTTGGTGAAGCAA+TGG - chr4_1:36228353-36228372 Msa0545700:intron 45.0%
!! TCTGGACTTGGTGAAGCAAT+GGG - chr4_1:36228354-36228373 Msa0545700:intron 45.0%
GCTATAATTCTCGGTTCCTC+AGG - chr4_1:36228377-36228396 Msa0545700:intron 45.0%
GGTTGTAAGGTTCTACCTCA+TGG - chr4_1:36228456-36228475 Msa0545700:intron 45.0%
GAAAACCGTGAGAAGGTCAA+AGG - chr4_1:36229747-36229766 Msa0545700:intron 45.0%
GTTGTAGTGTCATCACTGAG+AGG + chr4_1:36229855-36229874 None:intergenic 45.0%
GTGATGACACTACAACACCA+TGG - chr4_1:36229859-36229878 Msa0545700:intron 45.0%
! ATACAGGGCATCTGGATGTA+GGG - chr4_1:36229949-36229968 Msa0545700:intron 45.0%
GAGTGCCTCGTACAAGAAAA+AGG + chr4_1:36230193-36230212 None:intergenic 45.0%
ATAGGTCTCCTACTACTGGA+AGG + chr4_1:36230296-36230315 None:intergenic 45.0%
TTCCAGTAGTAGGAGACCTA+TGG - chr4_1:36230295-36230314 Msa0545700:intron 45.0%
TCCAGTAGTAGGAGACCTAT+GGG - chr4_1:36230296-36230315 Msa0545700:intron 45.0%
!! ACTGCACCTCTTTTTGGTAG+TGG - chr4_1:36230342-36230361 Msa0545700:intron 45.0%
GTGAGCTTAGCTCAACTGAT+TGG + chr4_1:36230410-36230429 None:intergenic 45.0%
TTCCACCTTTCACAGGAATG+TGG - chr4_1:36230593-36230612 Msa0545700:intron 45.0%
TTCCACATTCCTGTGAAAGG+TGG + chr4_1:36230598-36230617 None:intergenic 45.0%
!! GGCATCTGATAATGGAACCA+AGG - chr4_1:36230857-36230876 Msa0545700:intron 45.0%
GAATCAGTTGGGGAAAACTC+GGG - chr4_1:36230915-36230934 Msa0545700:intron 45.0%
AATCAGTTGGGGAAAACTCG+GGG - chr4_1:36230916-36230935 Msa0545700:intron 45.0%
AAAACTCGGGGACGTCTTTA+TGG - chr4_1:36230928-36230947 Msa0545700:intron 45.0%
TGGAGATACATGCGATTGCT+GGG + chr4_1:36231001-36231020 None:intergenic 45.0%
ATGGAGATACATGCGATTGC+TGG + chr4_1:36231002-36231021 None:intergenic 45.0%
! TTAGTAGCGATGTTTCTGCC+GGG - chr4_1:36231022-36231041 Msa0545700:intron 45.0%
TACCCACGAACAATTACCCG+CGG - chr4_1:36227127-36227146 Msa0545700:intron 50.0%
AACAATTACCCGCGGCTGTA+AGG - chr4_1:36227135-36227154 Msa0545700:intron 50.0%
!! GAGTAGTGACGGATTACCCA+AGG - chr4_1:36227175-36227194 Msa0545700:intron 50.0%
GGAGAGTTCACGAAAGAGAG+AGG + chr4_1:36227524-36227543 None:intergenic 50.0%
CTCTCTTTCGTGAACTCTCC+CGG - chr4_1:36227524-36227543 Msa0545700:intron 50.0%
TGCGAGAAGAGAGATACGAC+CGG + chr4_1:36227546-36227565 None:intergenic 50.0%
ATTCTCGGGAGAAAGGGTTC+TGG - chr4_1:36227675-36227694 Msa0545700:intron 50.0%
TCAGAAAAGGGGTTCTCGTG+AGG - chr4_1:36227698-36227717 Msa0545700:intron 50.0%
AAAAGGGGTTCTCGTGAGGA+AGG - chr4_1:36227702-36227721 Msa0545700:intron 50.0%
AAAGGGGTTCTCGTGAGGAA+GGG - chr4_1:36227703-36227722 Msa0545700:intron 50.0%
!!! GGGATCTGAAGGGTGTTTTG+TGG - chr4_1:36228077-36228096 Msa0545700:intron 50.0%
!! CTGGACTTGGTGAAGCAATG+GGG - chr4_1:36228355-36228374 Msa0545700:intron 50.0%
GATGGAAATCTGACTCCCTG+AGG + chr4_1:36228396-36228415 None:intergenic 50.0%
! AAGGGGTCGTGTTTCTGATG+TGG - chr4_1:36229207-36229226 Msa0545700:intron 50.0%
! AGGGGTCGTGTTTCTGATGT+GGG - chr4_1:36229208-36229227 Msa0545700:intron 50.0%
GATGTGGGAATAGTATGCGC+AGG - chr4_1:36229223-36229242 Msa0545700:intron 50.0%
GTGGACCTTTGACCTTCTCA+CGG + chr4_1:36229755-36229774 None:intergenic 50.0%
ACACTACAACACCATGGCAG+AGG - chr4_1:36229865-36229884 Msa0545700:intron 50.0%
CACTACAACACCATGGCAGA+GGG - chr4_1:36229866-36229885 Msa0545700:intron 50.0%
ACGCAGACCAGCTGAATGAA+GGG - chr4_1:36229889-36229908 Msa0545700:intron 50.0%
! GATACAGGGCATCTGGATGT+AGG - chr4_1:36229948-36229967 Msa0545700:intron 50.0%
ATGCATGGCAGTCGGATACA+GGG - chr4_1:36229979-36229998 Msa0545700:intron 50.0%
GCATCTAGATGCAGTGCAGT+TGG - chr4_1:36230001-36230020 Msa0545700:intron 50.0%
ACCCATAGGTCTCCTACTAC+TGG + chr4_1:36230300-36230319 None:intergenic 50.0%
!!! CACCTCTTTTTGGTAGTGGC+CGG - chr4_1:36230346-36230365 Msa0545700:intron 50.0%
!!! ACCTCTTTTTGGTAGTGGCC+GGG - chr4_1:36230347-36230366 Msa0545700:intron 50.0%
TCAGTTGAGCTAAGCTCACG+AGG - chr4_1:36230411-36230430 Msa0545700:intron 50.0%
TGTTGCAGGATCAACCTCCT+TGG + chr4_1:36230877-36230896 None:intergenic 50.0%
! ATGGTAAAGCGCTACAAGCC+AGG - chr4_1:36230961-36230980 Msa0545700:intron 50.0%
TACATGCGATTGCTGGGTCA+GGG + chr4_1:36230995-36231014 None:intergenic 50.0%
ATACATGCGATTGCTGGGTC+AGG + chr4_1:36230996-36231015 None:intergenic 50.0%
GTAGAGAGCAAATGCAGCAG+AGG - chr4_1:36231069-36231088 Msa0545700:intron 50.0%
AGCCGCGGGTAATTGTTCGT+GGG + chr4_1:36227132-36227151 None:intergenic 55.0%
GCGAGAAGAGAGATACGACC+GGG + chr4_1:36227545-36227564 None:intergenic 55.0%
CGCACACGATCTCTTCCGAT+TGG - chr4_1:36227562-36227581 Msa0545700:intron 55.0%
GGAGTAGGACGATGGCCAAT+CGG + chr4_1:36227580-36227599 None:intergenic 55.0%
GATGGTTGGGCAATCGGAGT+AGG + chr4_1:36227595-36227614 None:intergenic 55.0%
GAGAGAGAGAGGAAGTCGGT+GGG + chr4_1:36227637-36227656 None:intergenic 55.0%
AGAGAGAGAGAGGAAGTCGG+TGG + chr4_1:36227638-36227657 None:intergenic 55.0%
AAGGGGTTCTCGTGAGGAAG+GGG - chr4_1:36227704-36227723 Msa0545700:intron 55.0%
GACGCAGACCAGCTGAATGA+AGG - chr4_1:36229888-36229907 Msa0545700:intron 55.0%
CGCAGACCAGCTGAATGAAG+GGG - chr4_1:36229890-36229909 Msa0545700:intron 55.0%
CCAGCTGAATGAAGGGGAGT+CGG - chr4_1:36229896-36229915 Msa0545700:intron 55.0%
AATGAAGGGGAGTCGGATGC+AGG - chr4_1:36229903-36229922 Msa0545700:intron 55.0%
ATGAAGGGGAGTCGGATGCA+GGG - chr4_1:36229904-36229923 Msa0545700:intron 55.0%
ATGCAGGGGAGCAAGATGCA+GGG - chr4_1:36229919-36229938 Msa0545700:intron 55.0%
ATGCAGGGCAGCTGGATACA+GGG - chr4_1:36229934-36229953 Msa0545700:intron 55.0%
ATGTAGGGCAGCTGGATGCA+TGG - chr4_1:36229964-36229983 Msa0545700:intron 55.0%
GATGCATGGCAGTCGGATAC+AGG - chr4_1:36229978-36229997 Msa0545700:intron 55.0%
!!! CCTCTTTTTGGTAGTGGCCG+GGG - chr4_1:36230348-36230367 Msa0545700:intron 55.0%
CGGGGACGTCTTTATGGTAC+TGG - chr4_1:36230934-36230953 Msa0545700:intron 55.0%
TGCCATCTGTGCAGCAATCC+CGG + chr4_1:36231043-36231062 None:intergenic 55.0%
CAGCCGCGGGTAATTGTTCG+TGG + chr4_1:36227133-36227152 None:intergenic 60.0%
GGGCAATCGGAGTAGGACGA+TGG + chr4_1:36227588-36227607 None:intergenic 60.0%
CCGACTCCCCTTCATTCAGC+TGG + chr4_1:36229899-36229918 None:intergenic 60.0%
TGAAGGGGAGTCGGATGCAG+GGG - chr4_1:36229905-36229924 Msa0545700:intron 60.0%
GATGCAGGGGAGCAAGATGC+AGG - chr4_1:36229918-36229937 Msa0545700:intron 60.0%
GATGCAGGGCAGCTGGATAC+AGG - chr4_1:36229933-36229952 Msa0545700:intron 60.0%
! GCAGCTGGATACAGGGCATC+TGG - chr4_1:36229941-36229960 Msa0545700:intron 60.0%
GCATCTGGATGTAGGGCAGC+TGG - chr4_1:36229956-36229975 Msa0545700:intron 60.0%
GCAGCTGGATGCATGGCAGT+CGG - chr4_1:36229971-36229990 Msa0545700:intron 60.0%
CCCCGGCCACTACCAAAAAG+AGG + chr4_1:36230351-36230370 None:intergenic 60.0%
AAGGTCCGGGGTTCAAACCC+CGG + chr4_1:36230368-36230387 None:intergenic 60.0%
TGGGTCAGGGAGGATACACC+TGG + chr4_1:36230982-36231001 None:intergenic 60.0%
ATGCGATTGCTGGGTCAGGG+AGG + chr4_1:36230992-36231011 None:intergenic 60.0%
TGCCGGGATTGCTGCACAGA+TGG - chr4_1:36231038-36231057 Msa0545700:intron 60.0%
TACCCACGGCCTTACAGCCG+CGG + chr4_1:36227147-36227166 None:intergenic 65.0%
TGGTCTGCGTCCCTCTGCCA+TGG + chr4_1:36229879-36229898 None:intergenic 65.0%
GGAGCAAGATGCAGGGCAGC+TGG - chr4_1:36229926-36229945 Msa0545700:intron 65.0%
AGTGGCCGGGGTTTGAACCC+CGG - chr4_1:36230360-36230379 Msa0545700:intron 65.0%
TACCCGCGGCTGTAAGGCCG+TGG - chr4_1:36227141-36227160 Msa0545700:intron 70.0%
ACCCGCGGCTGTAAGGCCGT+GGG - chr4_1:36227142-36227161 Msa0545700:intron 70.0%
ACCCACGGCCTTACAGCCGC+GGG + chr4_1:36227146-36227165 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 36226656 36231095 36226656 ID=Msa0545700;Name=Msa0545700
chr4_1 mRNA 36226656 36231095 36226656 ID=Msa0545700-mRNA-1;Parent=Msa0545700;Name=Msa0545700-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0.12|0.11|0.88|0.25|0.55|9|0|281
chr4_1 exon 36231091 36231095 36231091 ID=Msa0545700-mRNA-1:exon:9233;Parent=Msa0545700-mRNA-1
chr4_1 exon 36230005 36230077 36230005 ID=Msa0545700-mRNA-1:exon:9232;Parent=Msa0545700-mRNA-1
chr4_1 exon 36229510 36229605 36229510 ID=Msa0545700-mRNA-1:exon:9231;Parent=Msa0545700-mRNA-1
chr4_1 exon 36229248 36229352 36229248 ID=Msa0545700-mRNA-1:exon:9230;Parent=Msa0545700-mRNA-1
chr4_1 exon 36228672 36228678 36228672 ID=Msa0545700-mRNA-1:exon:9229;Parent=Msa0545700-mRNA-1
chr4_1 exon 36228537 36228637 36228537 ID=Msa0545700-mRNA-1:exon:9228;Parent=Msa0545700-mRNA-1
chr4_1 exon 36227786 36228019 36227786 ID=Msa0545700-mRNA-1:exon:9227;Parent=Msa0545700-mRNA-1
chr4_1 exon 36226870 36226920 36226870 ID=Msa0545700-mRNA-1:exon:9226;Parent=Msa0545700-mRNA-1
chr4_1 exon 36226656 36226829 36226656 ID=Msa0545700-mRNA-1:exon:9225;Parent=Msa0545700-mRNA-1
chr4_1 CDS 36231091 36231095 36231091 ID=Msa0545700-mRNA-1:cds;Parent=Msa0545700-mRNA-1
chr4_1 CDS 36230005 36230077 36230005 ID=Msa0545700-mRNA-1:cds;Parent=Msa0545700-mRNA-1
chr4_1 CDS 36229510 36229605 36229510 ID=Msa0545700-mRNA-1:cds;Parent=Msa0545700-mRNA-1
chr4_1 CDS 36229248 36229352 36229248 ID=Msa0545700-mRNA-1:cds;Parent=Msa0545700-mRNA-1
chr4_1 CDS 36228672 36228678 36228672 ID=Msa0545700-mRNA-1:cds;Parent=Msa0545700-mRNA-1
chr4_1 CDS 36228537 36228637 36228537 ID=Msa0545700-mRNA-1:cds;Parent=Msa0545700-mRNA-1
chr4_1 CDS 36227786 36228019 36227786 ID=Msa0545700-mRNA-1:cds;Parent=Msa0545700-mRNA-1
chr4_1 CDS 36226870 36226920 36226870 ID=Msa0545700-mRNA-1:cds;Parent=Msa0545700-mRNA-1
chr4_1 CDS 36226656 36226829 36226656 ID=Msa0545700-mRNA-1:cds;Parent=Msa0545700-mRNA-1
Gene Sequence

>Msa0545700

ATGAAGATTCTCGGGAGAAAGGGTTCTGGTCAGAAAAGGGGTTCTCGTGAGGAAGGGGATTCTCCATTTTCAATTTTTATTAGGACACATTATATTAGGAAAGCTCATGAGAATATTGATCAGACTTTGAAGGCTTCTGAGATTATATTGTCTCACTTTGATCAATATTGTCAGGGAGTCAGATTTCCATCCATTTTGAAGAATGTACTTGAGGAGGTTAAGAATGATATTGGTTGTAAGGTTCTACCTCATGGCAATCTTGAAAAATGGGATGTGCAGTATACTAGTAGGATATATGAAGATAATGCAAATGCACATGCAAATATAGGCTACAAACAATTCACAAATGCTGTTATCAAGACGATCATAGAGAAGAAGGAAGGGGTCATCATGGCTCCTAAAGAAAACCGTGAGAAGGTCAAAGGTCCACAGATGAAAAAGTGGATGATTATGCCGCATAAGTTGAAACAAGCGACTAAGAATCTACATGGATTAGCTTCGAAGTCGCCTCTCAGTGATGACACTACAACACCATGGCAGAGGGACGCAGACCAGCTGAATGAAGGGGAGTCGGATGCAGGGGAGCAAGATGCAGGGCAGCTGGATACAGGGCATCTGGATGAAATATATAAGGAAAAGATGGAGAAGGCATCTGATAATGGAACCAAGGAGTTGGGGAAAACTCGGGGACGTCTTTATGGTACTGGTGATATGGTAAAGCGCTACAAGCCAGGTGTATCCTCCCTGACCCAGCAATCGCATGTATCTCCATTTAGTAGCGATGTTTCTGCCGGGATTGCTGCACAGATGGCAGCAATTGTAGAGAGCAAATGCAGCAGAGGATGA

Protein sequence

>Msa0545700

MKILGRKGSGQKRGSREEGDSPFSIFIRTHYIRKAHENIDQTLKASEIILSHFDQYCQGVRFPSILKNVLEEVKNDIGCKVLPHGNLEKWDVQYTSRIYEDNANAHANIGYKQFTNAVIKTIIEKKEGVIMAPKENREKVKGPQMKKWMIMPHKLKQATKNLHGLASKSPLSDDTTTPWQRDADQLNEGESDAGEQDAGQLDTGHLDEIYKEKMEKASDNGTKELGKTRGRLYGTGDMVKRYKPGVSSLTQQSHVSPFSSDVSAGIAAQMAAIVESKCSRG*